Spg025981 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025981
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold7: 3259144 .. 3263487 (+)
RNA-Seq Expression	Spg025981
Synteny	Spg025981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACTCCTCTTCGCCACCAAAGAAGAGGACCCGAACTCAATTCTCGACTCTCTTCTCTTGCTCTCTATCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCATGTTTTCTCTTTCGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAAGTGAGTTTCCTCTGACCAAAATCGACCATCAACAGTTGGCGCCGTCTGTGGGGATGAAAGCTTGCCAAATCTGCATATCAGTCATTCCATGAGTAAGGAGATGGAGAAGAGAATTCAAGACATAAACACAGAAAATTCTGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCAGACCGAATCTCCTCGTCCTCGGCTTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCAGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAGCCTACTAATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTACCGAAGCTGAAGCCAGGACTGCCGAAGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCTCCCCTGGAAGACCGAGCTTCTGAGCGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAAGTCAAGGGACCTCGGAGACCAAGACTTGGAAGAACTAATCGATCGGGTTGACCCGCCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGTCCCAAAAGTTCAAGGTACCCACGTTCACACCGTACGATGGCAAGAAAGACCCCGTGCAACATCTAAACACCTACCAAAACTGGATGGACTTCCATGGTGTCTCAGACGCAATCAAGTGCCGCGCATTCTTTTTCACCTTGACAGGATCGGCCAAGCATTGGTTTGGAAGGTTAAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACGGCCAGGTGAGAGCTTGCGTGATTACATAACACGTTTTAATGACGAAGCACTACAAGTTGAGGGGTACAGCGAGGGAGCAGCCCTGGTAGCCATAACAGCCGGACTGGAAGACGAGAGACTGCTCAACTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTCTCCCGGGCACAGAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGTCATCTGACCACGATAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAGTTCGAGAAATATACGCCAACAGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACGGGACTCTTGAAATTCCCGGGGAGGATGAAGTCGAATCCTGATAAAAGAGACAAGAGCCAGTATTGTCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCTGAAGGAATTCATCGGTGAGCCCAAGGCCGAGGCCGACCAGGGATGGTTGAGGCCGAGGCCGACCAAGGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGGACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGTCAGGGAAACAATGTTCGAACCGGAGTATCGAGGTATGTACTCTGTCCATCTATCAAAGGCGCCCCCCCCCCTTGGAGTTCACCGAGGCTGAGGCAGCAAGCATTCATCAGCCACATAATGATGCCCTGGTGGTCACTCTAATTGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTTTAACAGCCTTTAAAGCCATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACTCCACTTGTAGGATTTGGAGGAGAGAGAGTAACCCCAGAAGGTAGCATAGAACTTCCTGTGACCTTTGGAGATGGACAGAATGCAGTGACAAAGATGATAAACTTCCTAGTTGTGGATTGTATGTCAGCCTACAATGCAATACTAGGAAGGTCAACCTTGCATGAGATGAAGGCCATAGCTTCAACTTACCATCAGTTGCTGAAGTTTCCAACTCCAAATGGTGTGGGAGTTGTCAAAGGAGAACAGAAGGAATCAAGAGAGTGTTACTGGACCGCGCTGAAAACAGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGGGTCGAGGCCGAGCAGGACACACTTCCGCCGATACTGAATCTGAACTTATGGAGTTTTAAGGCTTCTTATTTATTGCATTTTATCATGTAATTAGACATTATCTATTTTTGTTTCTTCCTCTAGTATAGGTTGAGTAGTTTTTCTTATTTGATTTCATTCAAGTGTAAAATTTCAATTAATGTCGAAGCCCTATTGATTCACCATTAAAGTTCAGTATTCAGAAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCACCGAGTCTACCTCGCCCCATCGGCTTGATACAATGTGAGCCTGGACCCTGGGTCTACCTCACGAGCCATCACTTTTTGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGTTTGAGATTGCGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGCATCTTCATATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCATCCAGTTTGAGATTGCGTGAGCCTGGACCAACGAGTCTACCTCACCTCATCTGGCTTGAGTATCTTCATATCAGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCCTCCAGATTGAGACTATGTGAGCCTGGACTACCGAGTCTACCTCACCTCATCTGGCCTGAGCATCCTCACATTGGGCGAGCCCGGACTACCGAGTCTACCTCGCCCCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCAAGTCTACCTCACCTCAGAGCTCAAACACTCGCTCAAGCACTTCATGTAAGTCAAGCTCACCTGGCGGAGGCCGAGACCAAGCACCTCTTGCCAAAGCCGAGCACCTCTTGCCAAGGCCGAGCACAAACTTTAAAGGTATTCTCCTACTTACTCAATTATACTTTGTGTTTTAATGAAGTTTTACTTGAGATTGGGGGCTGCAAAGGGGATATGCACTCCCTATTAAACAAAAAGCAAGTAACAGGGGATATGCACTCCCTATTAAACAAAAGGCACACTAGCTTAGCATGTCTAACCAATGGTTACATGCTCTGGCTTACTCTCCTATCATTTTCCTACAAAGACTCACATATGAATGCAGGGAGCTAAGTTTTGAGCTAAAAGGGGCATGAGGCCGGGGCCGAGCTTAGCCTCTTCCCTCATTCTTCTTTTTGCAGAGATTAACATTTTGATGCAGGATCGTGAGATCTTCCTACATTTTACTTGTGGATAACCTCTGGATCCGGAATGATGCAATCCGAATGACCAAATACGGGGGTCTCGCTGACCGGTCAACGAGTCAGGGTCCAGGGGCGAAGCGCCCGGTGGGGGTTCGGGGGAAACGCCCCCTAAGCAAAATTAGAAAAATGCTCGGCCTCTTCCCGAGGCCGAGGCCGAGCCGACAAGCTAAAAGGAGGATGGTAGTGCTCGGCCTCTTCCCGAGGCCGACCAACACCACTTTTGTAATCCCTCACCTTTTCTCATTTCTATCTCACCTAACCCCTATTCAGGGAGTTTTGTTTTGTCTATTTCTATCCCATAATGCAGGATAG

mRNA sequence

ATGTCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACTCCTCTTCGCCACCAAAGAAGAGGACCCGAACTCAATTCTCGACTCTCTTCTCTTGCTCTCTATCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGTTGGCGCCGTCTGTGGGGATGAAAGCTTGCCAAATCTGCATATCAGTCATTCCATGAGTAAGGAGATGGAGAAGAGAATTCAAGACATAAACACAGAAAATTCTGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCAGACCGAATCTCCTCGTCCTCGGCTTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCAGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAGCCTACTAATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTACCGAAGCTGAAGCCAGGACTGCCGAAGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCTCCCCTGGAAGACCGAGCTTCTGAGCGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAACGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGTCATCTGACCACGATAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAGTTCGAGAAATATACGCCAACAGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACGGGACTCTTGAAATTCCCGGGGAGGATGAAGTCGAATCCTGATAAAAGAGACAAGAGCCAGTATTGTCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCTGAAGGAATTCATCGGTGAGCCCAAGGCCGAGGCCGACCAGGGATGGTTGAGGCCGAGGCCGACCAAGGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGGACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGTCAGGGAAACAATGTTCGAACCGGAGTATCGAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTTTAACAGCCTTTAAAGCCATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACTCCACTTGTAGGATTTGGAGGAGAGAGAGTAACCCCAGAAGTATTCAGAAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCACCGAGTCTACCTCGCCCCATCGGCTTGATACAATGTGAGCCTGGACCCTGGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCCTCCAGATTGAGACTATGTGAGCCTGGACTACCGAGTCTACCTCACCTCATCTGGCCTGAGCATCCTCACATTGGGCGAGCCCGGACTACCGAGTCTACCTCGCCCCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCAAGTCTACCTCACCTCAGAGCTCAAACACTCGCTCAAGCACTTCATGTAAGTCAAGCTCACCTGGCGGAGGCCGAGACCAAGCACCTCTTGCCAAAGCCGAGCACCTCTTGCCAAGGCCGAGCACAAACTTTAAAGGATAG

Coding sequence (CDS)

ATGTCGCTAGCCGCCTCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGGTATTTATACTCCTCTTCGCCACCAAAGAAGAGGACCCGAACTCAATTCTCGACTCTCTTCTCTTGCTCTCTATCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGTTGGCGCCGTCTGTGGGGATGAAAGCTTGCCAAATCTGCATATCAGTCATTCCATGAGTAAGGAGATGGAGAAGAGAATTCAAGACATAAACACAGAAAATTCTGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCAGACCGAATCTCCTCGTCCTCGGCTTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCAATCGAGTACACTGCAGAATCAGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAGCCTACTAATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTACCGAAGCTGAAGCCAGGACTGCCGAAGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCTCCCCTGGAAGACCGAGCTTCTGAGCGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAACGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGTCATCTGACCACGATAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAGTTCGAGAAATATACGCCAACAGCTGTTCCACAGGAGCAAGTACTGATGGAGATCCGAAATACGGGACTCTTGAAATTCCCGGGGAGGATGAAGTCGAATCCTGATAAAAGAGACAAGAGCCAGTATTGTCTTTTCCACCGGGACCATGGACATTCAACCAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCACTGATCCAGAATGGGTATCTGAAGGAATTCATCGGTGAGCCCAAGGCCGAGGCCGACCAGGGATGGTTGAGGCCGAGGCCGACCAAGGATGGCCGAGACAAAGAAGAACCCCTACGGGAGATCAGGACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGTCAGGGAAACAATGTTCGAACCGGAGTATCGAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAGCTCGGCTGATGTCCTTTCTTTAACAGCCTTTAAAGCCATGCAGTTAGAGAGGGAACTCTTAAAGCCAAGCCTTACTCCACTTGTAGGATTTGGAGGAGAGAGAGTAACCCCAGAAGTATTCAGAAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCACCGAGTCTACCTCGCCCCATCGGCTTGATACAATGTGAGCCTGGACCCTGGGCGAGCCTGGACTACCGAGTCTACCTCGCCTCCTCCAGATTGAGACTATGTGAGCCTGGACTACCGAGTCTACCTCACCTCATCTGGCCTGAGCATCCTCACATTGGGCGAGCCCGGACTACCGAGTCTACCTCGCCCCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCACCCAAGTCTACCTCACCTCAGAGCTCAAACACTCGCTCAAGCACTTCATGTAAGTCAAGCTCACCTGGCGGAGGCCGAGACCAAGCACCTCTTGCCAAAGCCGAGCACCTCTTGCCAAGGCCGAGCACAAACTTTAAAGGATAG

Protein sequence

MSLAASVSPGLSRNASEFLKTLGARAGIYTPLRHQRRGPELNSRLSSLALYLSLPFSDLSIGGVGAVCGDESLPNLHISHSMSKEMEKRIQDINTENSDGDRHQRRSREEGRDRPQTESPRPRLPLPSSREKQADLKFAALENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPIEYTAESETRSKGKKTSSMTSKVRGLKPTNRTILRSPESSTLRGRDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARATEAEARTAEAEARAAEAEARLAEAEAKKDNLPWKTELLSALKELGNPQGDLQNAEELLKSKKSEREHKRSSSSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEADQGWLRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRETMFEPEYRANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVGFGGERVTPEVFRSVHKTTDSSITKREPGPPSLPRPIGLIQCEPGPWASLDYRVYLASSRLRLCEPGLPSLPHLIWPEHPHIGRARTTESTSPHPNLRLHEPGPPKSTSPKSTSPQSSNTRSSTSCKSSSPGGGRDQAPLAKAEHLLPRPSTNFKG

Homology

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BLAST of Spg025981 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 206.8 bits (525), Expect = 6.0e-49
Identity = 117/254 (46.06%), Postives = 148/254 (58.27%), Query Frame = 0


Query: 345 KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 404
           K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+
Sbjct: 368 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKA 427

Query: 405 NPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEADQGWLRPRP 464
           +  KR K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE++ EPKA           
Sbjct: 428 SSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA----------- 487

Query: 465 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRETMFEPEYR---------------- 524
           T++G   + P REIRTI GGP    S RKRKA VRE     E                  
Sbjct: 488 TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVTIEF 547

Query: 525 ----------------------ANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSL 561
                                 ANVK+HR+L+DGGSSAD++S TA+KAM L  ++LK S 
Sbjct: 548 SEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADIJSWTAYKAMDLXEKVLKXSP 607

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BLAST of Spg025981 vs. NCBI nr
Match: XP_022144467.1 (uncharacterized protein LOC111014147 [Momordica charantia])

HSP 1 Score: 188.3 bits (477), Expect = 2.2e-43
Identity = 99/175 (56.57%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 388 MEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEF 447
           MEI++  LLK+P RMK+   KR KS+YCLFHR HGH+T++C  LK+E+E LI+ GYLKE+
Sbjct: 1   MEIKDQRLLKWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 448 IGEPKAEADQGWLRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRE--TMFEP 507
           + EPKA           T++G   + P REIRTI GGP    S RKRKA VRE  T  E 
Sbjct: 61  VEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQ 120

Query: 508 EYRANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVGFGGERVTPE 561
              ANVK+HR+L+DGGS AD+LS TA+KAM L  ++LK S  PLVGFGGERV PE
Sbjct: 121 NEIANVKVHRVLVDGGSLADILSWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPE 164

[Close]

BLAST of Spg025981 vs. NCBI nr
Match: XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 5.6e-39
Identity = 97/195 (49.74%), Postives = 123/195 (63.08%), Query Frame = 0


Query: 375 KYTPTAVPQEQVLMEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDE 434
           K TPT V  EQVLMEI++  LLK+P RMK+ P KR K QY LFHRDHGH+T++C  LK+E
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 435 IEALIQNGYLKEFIGEPKAEADQGWLRPRPTKDG-RDKEEPLREIRTIFGGPAGGSSSRK 494
           +E LI++GYLKE++ +PKA           T++G  D   P+REIRTI           +
Sbjct: 64  VEGLIRSGYLKEYVEDPKA-----------TQNGENDSNSPVREIRTIMEEQPAKLEFSE 123

Query: 495 RKAIVRETMFEPEYR--------ANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPS 554
            +A     +F P           AN K+HRIL+DGGSS  ++SLTA+KAM L  + LK S
Sbjct: 124 DEA---THLFHPHNDALVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSS 183

Query: 555 LTPLVGFGGERVTPE 561
             PLVGFGGERV PE
Sbjct: 184 PVPLVGFGGERVIPE 184

[Close]

BLAST of Spg025981 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 5.2e-37
Identity = 114/303 (37.62%), Postives = 151/303 (49.83%), Query Frame = 0


Query: 381 VPQEQVLMEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQ 440
           VP EQVLMEI+   LL++P RM +   KR K +YCLFHRDH H+T++C  LK E++ LIQ
Sbjct: 2   VPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQ 61

Query: 441 NGYLKEFIGEPKAEADQGWLRPRPTKDG-RDKEEPLREIRTIFGGPAGGSSSRKRKAIVR 500
            GYLKE++ +PKA           T++G  D + P REIRTI GGP      RKRKA +R
Sbjct: 62  RGYLKEYVEDPKA-----------TQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIR 121

Query: 501 ET------------------------------MFEPEYR--------ANVKIHRILIDGG 560
           ET                              +  P           AN K+HRIL+DGG
Sbjct: 122 ETRTSQVQHEIYHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGG 181

Query: 561 SSADVLSLTAFKAMQLERELLKPSLTPLVGFGGERVTPEVFRSVHKTTDSSITKREPGPP 620
           SSAD++SLTA+KAM L     K S   LV F GERV PE    +  T  S       GP 
Sbjct: 182 SSADIISLTAYKAMDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGS-------GPK 241

Query: 621 SLPRPIGLIQCEPGPWASLDYRVYLASSRLRLCEPGLPSLPH--LIWPEHPHIGRARTTE 643
           S+   +  +  +   +AS  Y   L    + + +  +PS  H  + +P H  IG  +  +
Sbjct: 242 SITTIMDFLVID---YAS-SYNAILGRPTIHMLK-AIPSTYHQSINFPTHGGIGEIKEEQ 281

[Close]

BLAST of Spg025981 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 4.9e-35
Identity = 95/222 (42.79%), Postives = 123/222 (55.41%), Query Frame = 0


Query: 345 KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 404
           K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK 
Sbjct: 152 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKV 211

Query: 405 NPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEADQGWLRPRP 464
              KR K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E++ EPKA           
Sbjct: 212 PSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA----------- 271

Query: 465 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRETMFEPEYR---------------- 524
           T++G  ++ P REIRTI GGP    S+RKRKA VRE     E                  
Sbjct: 272 TQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRSVTIEF 331

Query: 525 ----------------------ANVKIHRILIDGGSSADVLS 529
                                 ANVK+HRIL+DGGSSAD++S
Sbjct: 332 SEDEATHLLHPHNDALVITLKIANVKVHRILVDGGSSADIIS 362

[Close]

BLAST of Spg025981 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-49
Identity = 118/254 (46.46%), Postives = 148/254 (58.27%), Query Frame = 0


Query: 345 KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 404
           K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+
Sbjct: 368 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLLKWPERMKA 427

Query: 405 NPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEADQGWLRPRP 464
           +  KR K +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE++ EPKA           
Sbjct: 428 SSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKA----------- 487

Query: 465 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRETMFEPEYR---------------- 524
           T++G   + P REIRTI GGP    S RKRKA VRE     E                  
Sbjct: 488 TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTNRPVTIEF 547

Query: 525 ----------------------ANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSL 561
                                 ANVK+HR+L+DGGSSAD+LS TA+KAM L  ++LK S 
Sbjct: 548 SEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADILSWTAYKAMDLXEKVLKXSP 607

[Close]

BLAST of Spg025981 vs. ExPASy TrEMBL
Match: A0A6J1CTS4 (uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014147 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.1e-43
Identity = 99/175 (56.57%), Postives = 122/175 (69.71%), Query Frame = 0


Query: 388 MEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEF 447
           MEI++  LLK+P RMK+   KR KS+YCLFHR HGH+T++C  LK+E+E LI+ GYLKE+
Sbjct: 1   MEIKDQRLLKWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEY 60

Query: 448 IGEPKAEADQGWLRPRPTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRE--TMFEP 507
           + EPKA           T++G   + P REIRTI GGP    S RKRKA VRE  T  E 
Sbjct: 61  VEEPKA-----------TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQ 120

Query: 508 EYRANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPSLTPLVGFGGERVTPE 561
              ANVK+HR+L+DGGS AD+LS TA+KAM L  ++LK S  PLVGFGGERV PE
Sbjct: 121 NEIANVKVHRVLVDGGSLADILSWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPE 164

[Close]

BLAST of Spg025981 vs. ExPASy TrEMBL
Match: A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-39
Identity = 97/195 (49.74%), Postives = 123/195 (63.08%), Query Frame = 0


Query: 375 KYTPTAVPQEQVLMEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDE 434
           K TPT V  EQVLMEI++  LLK+P RMK+ P KR K QY LFHRDHGH+T++C  LK+E
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 435 IEALIQNGYLKEFIGEPKAEADQGWLRPRPTKDG-RDKEEPLREIRTIFGGPAGGSSSRK 494
           +E LI++GYLKE++ +PKA           T++G  D   P+REIRTI           +
Sbjct: 64  VEGLIRSGYLKEYVEDPKA-----------TQNGENDSNSPVREIRTIMEEQPAKLEFSE 123

Query: 495 RKAIVRETMFEPEYR--------ANVKIHRILIDGGSSADVLSLTAFKAMQLERELLKPS 554
            +A     +F P           AN K+HRIL+DGGSS  ++SLTA+KAM L  + LK S
Sbjct: 124 DEA---THLFHPHNDALVITLKIANAKVHRILVDGGSSTYIISLTAYKAMDLGEKALKSS 183

Query: 555 LTPLVGFGGERVTPE 561
             PLVGFGGERV PE
Sbjct: 184 PVPLVGFGGERVIPE 184

[Close]

BLAST of Spg025981 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-37
Identity = 114/303 (37.62%), Postives = 151/303 (49.83%), Query Frame = 0


Query: 381 VPQEQVLMEIRNTGLLKFPGRMKSNPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQ 440
           VP EQVLMEI+   LL++P RM +   KR K +YCLFHRDH H+T++C  LK E++ LIQ
Sbjct: 2   VPLEQVLMEIKYQRLLQWPERMNAPQSKRSKGRYCLFHRDHDHATQDCFDLKKEVKELIQ 61

Query: 441 NGYLKEFIGEPKAEADQGWLRPRPTKDG-RDKEEPLREIRTIFGGPAGGSSSRKRKAIVR 500
            GYLKE++ +PKA           T++G  D + P REIRTI GGP      RKRKA +R
Sbjct: 62  RGYLKEYVEDPKA-----------TQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIR 121

Query: 501 ET------------------------------MFEPEYR--------ANVKIHRILIDGG 560
           ET                              +  P           AN K+HRIL+DGG
Sbjct: 122 ETRTSQVQHEIYHTFVAKQPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGG 181

Query: 561 SSADVLSLTAFKAMQLERELLKPSLTPLVGFGGERVTPEVFRSVHKTTDSSITKREPGPP 620
           SSAD++SLTA+KAM L     K S   LV F GERV PE    +  T  S       GP 
Sbjct: 182 SSADIISLTAYKAMDLGERGRKSSPASLVRFRGERVIPEGRTELTVTFGS-------GPK 241

Query: 621 SLPRPIGLIQCEPGPWASLDYRVYLASSRLRLCEPGLPSLPH--LIWPEHPHIGRARTTE 643
           S+   +  +  +   +AS  Y   L    + + +  +PS  H  + +P H  IG  +  +
Sbjct: 242 SITTIMDFLVID---YAS-SYNAILGRPTIHMLK-AIPSTYHQSINFPTHGGIGEIKEEQ 281

[Close]

BLAST of Spg025981 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-35
Identity = 95/222 (42.79%), Postives = 123/222 (55.41%), Query Frame = 0


Query: 345 KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKS 404
           K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK 
Sbjct: 152 KRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLKWPERMKV 211

Query: 405 NPDKRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFIGEPKAEADQGWLRPRP 464
              KR K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E++ EPKA           
Sbjct: 212 PSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKA----------- 271

Query: 465 TKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIVRETMFEPEYR---------------- 524
           T++G  ++ P REIRTI GGP    S+RKRKA VRE     E                  
Sbjct: 272 TQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPSREQNEVYHAYTTNRSVTIEF 331

Query: 525 ----------------------ANVKIHRILIDGGSSADVLS 529
                                 ANVK+HRIL+DGGSSAD++S
Sbjct: 332 SEDEATHLLHPHNDALVITLKIANVKVHRILVDGGSSADIIS 362

The following BLAST results are available for this feature:

BLAST of Spg025981 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	6.0e-49	46.06	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022144467.1	2.2e-43	56.57	uncharacterized protein LOC111014147 [Momordica charantia]	[more]
XP_022155873.1	5.6e-39	49.74	uncharacterized protein LOC111022886 [Momordica charantia]	[more]
XP_022150028.1	5.2e-37	37.62	uncharacterized protein LOC111018300 [Momordica charantia]	[more]
XP_022159368.1	4.9e-35	42.79	uncharacterized protein LOC111025785 [Momordica charantia]	[more]

BLAST of Spg025981 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	2.2e-49	46.46	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CTS4	1.1e-43	56.57	uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DP33	2.7e-39	49.74	uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D8C9	2.5e-37	37.62	uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DYL6	2.4e-35	42.79	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Spg025981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 241..291
None	No IPR available	COILS	Coil	Coil	coord: 315..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 634..706
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 565..586
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 656..682
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025981.1	Spg025981.1	mRNA