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Spg025930 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAATTACAGTTTTACTCTCTGTTCTCGTATATATAAAGCTGCTCGTCAGCCATGTCTCCAAACCTGTGCATTCAAACAAGATTTCTCTCAGAGAAGAAGCTCAAACAGATTCGAGTTTAAAAACTTCCAGCTTCAATTTCCAGAAAGATGGGAGCAAGCTTTACTGTCCCACGTTCAAAATCTTCCAAATCAACAATACAAGAAAAGGCTCCCACCATTGTCGAGTGCCGCAACAAAGCTCAGTGGACAGCTCGTTTCGAAGCCACAAAGGAAACAAACAAGCTTGTAAGTTTTCATATGAACTTTCTATCCCCAACATATGGTAATGCATGCTTTGGCTCTGTCGAGCTTATTGTACTTGGTGATTTGTTGTGCTGCTGGTTTGGTATAGATGGTGATTGATTTCACTGCTACTTGGTGTGGGCCTTGTCGACACATGGAGCCAACCATCAAGGAGTTTGCTGCAAGGTTCAAGGACGTCGAGTTCATCAAAATCGACGTCGATGAGTTGACGGTAGGAGCTTTCAATCTTGTTTTGTCTGTGTTTAGTTTTTTGGTTCAGTGGATGAGTTGAAACGTGACCGTGTTGACAACAGGATGTTGCAAAGGAATATGGCGCGGAGGCAATGCCAACATTCATACTGATCAAGAACGGTAAAGTAATTGATAAGGTGGTGGGAGCCAGGAGGGAGGACCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGATGATGCTCATGAAGCTTCTCAATAAGTAAGAAGAAAGCAGTAATAAAGAACCAGGAATCTAGTTGTCTAGAACAAACTAATAGTGTTTATTCTATTATGCCAGCCCTTGTGACTTCTGTTAAGAAAATTTCTACCTTTTTCTTCTATTTGTCCAATCTCTCTCTTCCTCTGCACAATCACACACAAGTACACAACAGAAATGCCAGGTAGTAGCTCAGCCAACAGAGTGAACATGCTTTTGATTGGTTTGATTGATTGCAATTAACATGGAGGATCCCTAAAGTAACAATCATGTGAAAATGGTGAAGATGATGGCAATGGTATTGGTATCATTTGATGCTAGCAAATTGGAGAATATAAGAAAAAGGACATTGCATAAATTATTCAACACCAGTGGATGTATACACCAAATTCCAAGGCTAATAAAATACATATAATCTTACATTGACTCTCCGTAAAAATATGTATGATCACATGATGCAACATTATTATAATCAAGTCAAAGTTAACTTTTGGCTACAAGGGTAGTGGATGAAGAATGCTAGATTTCCATTCCTAAAACATATTTCCAGGAATCAATCAAGCATTTCTCCAGAATCCTAATATGCACAATGTTCCTTTCCGGAGTAAGACAAGTATTTACATGTTTTTGAGCTTGCATTATCGATCCCCTGTGGCGAGGGTTCGTTGTTGTTGTGGCTGCACCTGAGCCCAATTTCTCAATCTGAACCACCCAAAGCCCTTCTTAGATCAGATTTCTGTTCAAAAGTAAGCTTTGATGGGAAAACGATATCAAACTTGATTCTAAGGTTCCCCTTCTTGTTTGGTTCTTTAGAGATGGGCATTCCTTCATTCTGGACAGCTACCTCGTAACCCGGTTTGACAATATCAGTCACAGTAGTGAGATTTCTTCCATCCAAAGTTGTAATGTTCAATGTCTTTCCGGTGAGTGCTTCTAATAGAGATATTTTCTGATTGACTACCAAATCATTACCATCCCTCTCAAAAACAGGATGAGGTTTCTCATCGATAATAAATATAAGATCAGCAGGAGCGACTCCAGGTTCTTGATTGCCTTTCTCAGGGAAAGTGATTTTTGTCCCCTTCTTCCAACCAGGCTTAATATCTATTTTTAACACTTCATCAACAGTTTTCGGCTTCCTACAAAACAAGTTACTTGAATGTCAAGCCTAAATGGAGGAGAAAGAAGAGAAGGAAAGTCAGGCCAAAAATATGCAAGAAAAGACAATAAGATCAATGAAATAGCGTGACATACAAACCCAATGCATTAATTATAAGAATCATTACTCACTGATGTCAAGTGTGAGCTTGATTGCAATGATGCTCAAAAAAAGGAAGAGCAAGCTTATGTTCATTTAATTCAATTCAACAATGTTCTTCTCCAATTTTAAACAGGAAAAGCATGTTTATTATTCATAAGCAACAGAAAATATCATTATAGATGCTTCAATTAGCTGGGGGTTAGAGAAAAGGTCGTGATGCAGTCTTGTGGTCATTGAAGAAAGTAGAAGCACAAGCACCAAGTCGTTTTCTGATCATAAACTTTATGCCAGAGTATAATATTCATATGATCATTGTCCACCCACTGTCTTTCTGTAAAACTCGCACAACCATCCAATTAGCTACACAAGTAGGCTTTTCACGTTAGGTTGACAAGAATTCAACATACTACGCTATGCTATGCTATTCATAGTTGCATACCACTGGTTCATATTAGTTTATCCTATTTCCTTCCCATCAATAGTTAAAGTAGAACAGAAGGGATTGTTTGCCATTTAAAGAGGTATCAATATCCTGATAATCCTAGGCAGCTCAGCCAGGAAAAAGGAATAATATATTCCATGTAATATTATCATTTTATAGTCCGCCCATTAAGCTTTACAACATCAAAGAGTATTATTGTATTACTAGTAACCCATGAAAGTTCATGGATACCATTAGATGCAATCGAACAAATTAGATTCATAAGCATTTAACATTGTTGTTTCAATTAAAATAGAAAAAGTAAAAGGAATGCGAAAAACCACGAACAGAAATAAGGAATTTGACATACCCAAATTCATCGG ATGGGAGCAAGCTTTACTGTCCCACGTTCAAAATCTTCCAAATCAACAATACAAGAAAAGGCTCCCACCATTGTCGAGTGCCGCAACAAAGCTCAGTGGACAGCTCGTTTCGAAGCCACAAAGGAAACAAACAAGCTTATGGTGATTGATTTCACTGCTACTTGGTGTGGGCCTTGTCGACACATGGAGCCAACCATCAAGGAGTTTGCTGCAAGGTTCAAGGACGTCGAGTTCATCAAAATCGACGTCGATGAGTTGACGGATGTTGCAAAGGAATATGGCGCGGAGGCAATGCCAACATTCATACTGATCAAGAACGGTAAAGTAATTGATAAGGTGGTGGGAGCCAGGAGGGAGGACCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGA ATGGGAGCAAGCTTTACTGTCCCACGTTCAAAATCTTCCAAATCAACAATACAAGAAAAGGCTCCCACCATTGTCGAGTGCCGCAACAAAGCTCAGTGGACAGCTCGTTTCGAAGCCACAAAGGAAACAAACAAGCTTATGGTGATTGATTTCACTGCTACTTGGTGTGGGCCTTGTCGACACATGGAGCCAACCATCAAGGAGTTTGCTGCAAGGTTCAAGGACGTCGAGTTCATCAAAATCGACGTCGATGAGTTGACGGATGTTGCAAAGGAATATGGCGCGGAGGCAATGCCAACATTCATACTGATCAAGAACGGTAAAGTAATTGATAAGGTGGTGGGAGCCAGGAGGGAGGACCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGA MGASFTVPRSKSSKSTIQEKAPTIVECRNKAQWTARFEATKETNKLMVIDFTATWCGPCRHMEPTIKEFAARFKDVEFIKIDVDELTDVAKEYGAEAMPTFILIKNGKVIDKVVGARREDLQKKIEKHSKY Homology
BLAST of Spg025930 vs. NCBI nr
Match: XP_022151175.1 (thioredoxin H4-like [Momordica charantia]) HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60 Identity = 117/131 (89.31%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Spg025930 vs. NCBI nr
Match: XP_004135204.1 (thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853 [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60 Identity = 117/131 (89.31%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Spg025930 vs. NCBI nr
Match: XP_038892719.1 (thioredoxin H4-like [Benincasa hispida]) HSP 1 Score: 242.3 bits (617), Expect = 2.4e-60 Identity = 117/131 (89.31%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Spg025930 vs. NCBI nr
Match: KAG6574117.1 (Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013177.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58 Identity = 113/131 (86.26%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Spg025930 vs. NCBI nr
Match: XP_022945457.1 (thioredoxin H4-like [Cucurbita moschata]) HSP 1 Score: 235.7 bits (600), Expect = 2.2e-58 Identity = 112/131 (85.50%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2) HSP 1 Score: 131.7 bits (330), Expect = 5.9e-30 Identity = 53/104 (50.96%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 3.3e-28 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.3e-28 Identity = 54/105 (51.43%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27 Identity = 56/125 (44.80%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy TrEMBL
Match: A0A6J1DAH1 (thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.8e-61 Identity = 117/131 (89.31%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy TrEMBL
Match: A0A0A0KQG0 (Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61 Identity = 117/131 (89.31%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy TrEMBL
Match: A0A6J1G103 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111449688 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58 Identity = 112/131 (85.50%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy TrEMBL
Match: A0A5A7SWX8 (Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00350 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57 Identity = 112/131 (85.50%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of Spg025930 vs. ExPASy TrEMBL
Match: A0A1S3BE83 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103489073 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57 Identity = 112/131 (85.50%), Postives = 118/131 (90.08%), Query Frame = 0
BLAST of Spg025930 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 ) HSP 1 Score: 131.7 bits (330), Expect = 4.2e-31 Identity = 53/104 (50.96%), Postives = 81/104 (77.88%), Query Frame = 0
BLAST of Spg025930 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein ) HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of Spg025930 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 ) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28 Identity = 51/110 (46.36%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Spg025930 vs. TAIR 10
Match: AT1G59730.1 (thioredoxin H-type 7 ) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28 Identity = 51/105 (48.57%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of Spg025930 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 ) HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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