Spg025832 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025832
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	J domain-containing protein
Location	scaffold7: 146055 .. 147701 (+)
RNA-Seq Expression	Spg025832
Synteny	Spg025832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGCGACGAAGCTAGAATCTTGCTTGGATTCTCTCCCGGCTCCTGCCCGTCTCCTTCCCAGGTGCTGTATTTAGAATTTACACATCTCTTCTCTTACAAATTCCTCTGTCTCCTTTAATTCTGATCAACGCATGTATAGTATGAATAGATTTTCAAGATGCTTCGGGTTCGGTTAAAGGTGTATTTCTGTTCTACATTGCAGCTTAAAGAAGCTTACAAAAGGAAGGTATGGGACTCTCATCCTGACCTGTTCCCTGCTCATGAAAAGTCTCAGGCGGAGTCCAAATTCAAACTCGTAAGGATTAAGGAACACGTTCTGTTGTATTTTTCACCAGCTTATGGTGTTGGTTAAAAGTTATAAGGCCGTCACGCTTTGTCTTAACGTGATACTTTGCATACTATAATGCGTTCATTTTGTGAATCCTATCTGAATACATGCATCTGCTGCAGATTTCCGAAGCTTATTCATGCCTCTTATCTGGTAATTCTCCTATATCTACAACTGATCTCAGACATGCTACAAGACATGGAAAAAAACCTAATTGAATTCCCTGTTTCTCCGATAGTGTACTTCCAAATTTCCTTCTGGTCTAAACTTCTTAATCTTTGCAGGTTCCCGAAAAGGAGATTCACATTCAGGTAATTTATATAAATCCTTCAATATTACTTAATTATTACTAGTTTTGTTAGTCCATTCTAGGATACAATTTGATGAGTGATTCTGGACAGCGACATATGAATGGGTTGTCAGAAGGGGGGTTCCCGTCTCATACGGAGGAAGAAGAAACCATGCCTTAATCAAGCTTCCCTTTCTATTGCTGATTCTGGGGACTGTTTCACTCGGAGGATTAAATGTTATCCGGTGAGTCCAAAGCATCAACATGTCATGATTTGTTAAAGAAATCCACAAGTTTTAAGAAGTTGCTCGCACTACTGCATTTTTCAGGGCATACAAAAAGCAGAAGGAAACGTATCCTTCTCACAATCCTTTTCTTCCTTAAGACAAGAAGAATTACGCCAAAAGCAAGAGTCTACTATGTTTGTTGGTTGAGTTGAGTTTGTAGTTTGTTGCTTGGGGAATGGTTACGGGATCAATTGATCTGCAGAAATGTGTAGAGAATATTCGTCTCCTGCTATCGGGCGGAAGAAACAAGCAGACAAATGATAGGTGCCAAATGAAGGTACATGGTGCGAGTGGAAAGAGTGTAAATTTGTTATTATAATACAAAGTCAAAATTGGTATGCCACAAACAGAATATTGCTCCGTAAGTGACTTATATACAAACCGAACAGGAGTTAAGTTGATTGATTCTCATTTTTCAATTCAATGTGTGTGGGTGAGTGATGTACTCGACTCTAGCCTGCCAAGGGTTGCATTGTACAATGCGCCCCGCTTGCACACGTCAATGGGCGCTTAGATGAGAGAGAAGCAGCCAGCCACTACCATCATGGCGACTGAAGAATGATACAAAATGGCTGATGGGTAGGCTAGTCCCCACGACCACTCTGTAAATTTGGAGTCCGGCTATAGGATCATGGATTGAAGAAACTCGAACCACCAATGTTGAATGCAATAAGCACCGATATACTTGTGATCACGGCAAGCCAAAATAACGCCGATTCTGCAGTTTATAAGTATTAG

mRNA sequence

ATGCAGGGCGACGAAGCTAGAATCTTGCTTGGATTCTCTCCCGGCTCCTGCCCGTCTCCTTCCCAGCTTAAAGAAGCTTACAAAAGGAAGGTATGGGACTCTCATCCTGACCTGTTCCCTGCTCATGAAAAGTCTCAGGCGGAGTCCAAATTCAAACTCGTAAGGATTAAGGAACACGTTCCCGAAAAGGAGATTCACATTCAGAAGGGGGGTTCCCGTCTCATACGGAGGAAGAAGAAACCATGCCTTAATCAAGCTTCCCTTTCTATTGCTGATTCTGGGGACTGTTTCACTCGGAGGATTAAATGTTATCCGTTTGTTGCTTGGGGAATGGTTACGGGATCAATTGATCTGCAGAAATGTGTAGAGAATATTCGTCTCCTGCTATCGGGCGGAAGAAACAAGCAGACAAATGATAGGTGCCAAATGAAGGATCATGGATTGAAGAAACTCGAACCACCAATGTTGAATGCAATAAGCACCGATATACTTGTGATCACGGCAAGCCAAAATAACGCCGATTCTGCAGTTTATAAGTATTAG

Coding sequence (CDS)

ATGCAGGGCGACGAAGCTAGAATCTTGCTTGGATTCTCTCCCGGCTCCTGCCCGTCTCCTTCCCAGCTTAAAGAAGCTTACAAAAGGAAGGTATGGGACTCTCATCCTGACCTGTTCCCTGCTCATGAAAAGTCTCAGGCGGAGTCCAAATTCAAACTCGTAAGGATTAAGGAACACGTTCCCGAAAAGGAGATTCACATTCAGAAGGGGGGTTCCCGTCTCATACGGAGGAAGAAGAAACCATGCCTTAATCAAGCTTCCCTTTCTATTGCTGATTCTGGGGACTGTTTCACTCGGAGGATTAAATGTTATCCGTTTGTTGCTTGGGGAATGGTTACGGGATCAATTGATCTGCAGAAATGTGTAGAGAATATTCGTCTCCTGCTATCGGGCGGAAGAAACAAGCAGACAAATGATAGGTGCCAAATGAAGGATCATGGATTGAAGAAACTCGAACCACCAATGTTGAATGCAATAAGCACCGATATACTTGTGATCACGGCAAGCCAAAATAACGCCGATTCTGCAGTTTATAAGTATTAG

Protein sequence

MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLVRIKEHVPEKEIHIQKGGSRLIRRKKKPCLNQASLSIADSGDCFTRRIKCYPFVAWGMVTGSIDLQKCVENIRLLLSGGRNKQTNDRCQMKDHGLKKLEPPMLNAISTDILVITASQNNADSAVYKY

Homology

[Close]

BLAST of Spg025832 vs. NCBI nr
Match: XP_022967118.1 (uncharacterized protein LOC111466618 [Cucurbita maxima])

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-20
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFPAH+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. NCBI nr
Match: XP_023541159.1 (uncharacterized protein LOC111801402 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-20
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFPAH+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. NCBI nr
Match: KAG6573609.1 (hypothetical protein SDJN03_27496, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-20
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFPAH+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. NCBI nr
Match: XP_023541160.1 (uncharacterized protein LOC111801402 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-20
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFPAH+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. NCBI nr
Match: XP_022945243.1 (uncharacterized protein LOC111449543 isoform X2 [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFP H+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPVHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. ExPASy TrEMBL
Match: A0A6J1HU66 (uncharacterized protein LOC111466618 OS=Cucurbita maxima OX=3661 GN=LOC111466618 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.1e-20
Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFPAH+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPAHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. ExPASy TrEMBL
Match: A0A6J1G0D6 (uncharacterized protein LOC111449543 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449543 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFP H+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPVHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. ExPASy TrEMBL
Match: A0A6J1G098 (uncharacterized protein LOC111449543 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449543 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEARILLGFSPGS PSPSQ+KEAYKRKVWDSHPDLFP H+KSQAESKFKL+
Sbjct: 1  MQGDEARILLGFSPGSRPSPSQVKEAYKRKVWDSHPDLFPVHQKSQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. ExPASy TrEMBL
Match: A0A5A7SXZ9 (Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001380 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 7.4e-18
Identity = 59/124 (47.58%), Postives = 70/124 (56.45%), Query Frame = 0


Query: 1   MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLVRI---- 60
           M+GDEAR LLGFSPGS PS SQ+KEAYKR VWD+HPDLFPAH+K QAESKFKLV I    
Sbjct: 1   MRGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLVNILLAE 60

Query: 61  -----------KEHVPEKEIHIQKGGSRLIRRKKKP----CLNQASLSIADSGDCFTRRI 106
                       E V  + + +  GG R     K P     L   SL   +    + R+ 
Sbjct: 61  FSYEAKFWTATYERVVRRGVPVSHGGRRNHALIKLPFLLLILGTVSLGGLNVSRAYKRQK 120

[Close]

BLAST of Spg025832 vs. ExPASy TrEMBL
Match: A0A0A0KRW5 (Heat shock protein DnaJ, N-terminal OS=Cucumis sativus OX=3659 GN=Csa_5G585980 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.8e-17
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          MQGDEAR LLGFSPGS PS SQ+KEAYKR VWD+HPDLFPAH+K QAESKFKL+
Sbjct: 1  MQGDEARTLLGFSPGSRPSSSQVKEAYKRMVWDTHPDLFPAHQKPQAESKFKLI 54

[Close]

BLAST of Spg025832 vs. TAIR 10
Match: AT3G62190.1 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-14
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          M+ +EA+ILLGF P S P PSQ+K AY++KVW+SHPDLFP  +K  AESKFK +
Sbjct: 1  MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSI 54

[Close]

BLAST of Spg025832 vs. TAIR 10
Match: AT3G62190.2 (Chaperone DnaJ-domain superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-14
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0


Query: 1  MQGDEARILLGFSPGSCPSPSQLKEAYKRKVWDSHPDLFPAHEKSQAESKFKLV 55
          M+ +EA+ILLGF P S P PSQ+K AY++KVW+SHPDLFP  +K  AESKFK +
Sbjct: 1  MEVEEAKILLGFPPNSRPDPSQVKAAYRKKVWESHPDLFPDDQKLVAESKFKSI 54

The following BLAST results are available for this feature:

BLAST of Spg025832 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967118.1	4.3e-20	92.59	uncharacterized protein LOC111466618 [Cucurbita maxima]	[more]
XP_023541159.1	4.3e-20	92.59	uncharacterized protein LOC111801402 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6573609.1	4.3e-20	92.59	hypothetical protein SDJN03_27496, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023541160.1	4.3e-20	92.59	uncharacterized protein LOC111801402 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022945243.1	1.3e-19	90.74	uncharacterized protein LOC111449543 isoform X2 [Cucurbita moschata]	[more]

BLAST of Spg025832 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HU66	2.1e-20	92.59	uncharacterized protein LOC111466618 OS=Cucurbita maxima OX=3661 GN=LOC111466618...	[more]
A0A6J1G0D6	6.1e-20	90.74	uncharacterized protein LOC111449543 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G098	6.1e-20	90.74	uncharacterized protein LOC111449543 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7SXZ9	7.4e-18	47.58	Chaperone protein DnaJ OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A0A0KRW5	2.8e-17	83.33	Heat shock protein DnaJ, N-terminal OS=Cucumis sativus OX=3659 GN=Csa_5G585980 P...	[more]

BLAST of Spg025832 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62190.1	2.2e-14	62.96	Chaperone DnaJ-domain superfamily protein	[more]
AT3G62190.2	2.2e-14	62.96	Chaperone DnaJ-domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43948	FAMILY NOT NAMED	coord: 1..55
None	No IPR available	PANTHER	PTHR43948:SF14	OS07G0637100 PROTEIN	coord: 1..55
IPR036869	Chaperone J-domain superfamily	SUPERFAMILY	46565	Chaperone J-domain	coord: 9..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025832.1	Spg025832.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding