Spg025774 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025774
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin-conjugating enzyme, E2
Location	scaffold7: 628554 .. 631346 (+)
RNA-Seq Expression	Spg025774
Synteny	Spg025774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCGAGCGTTTTACCTTTTCATTTTCTTCATCGCTCAGACAGGGAGAACAGAGACAGACACAGGTAATTTTAGGGTTTCTTTATCTTTATGTCGTCTTCTTCTTCTTCTTCATTCTCTGCTTTCCATTTTTTTCTCTCCTTCCAGTTTTTCATCGAAGATTATTCTATAAACATGCTTCTCTTCTCTTCTTCCATCTCTCGATTCTTCCCTTCCAATCGCTTTTCAAAACCCTACGGAATCCTCCTCCAAAGGTGACCCAAATCCCTTAATTCTCTCCATTTTCTCTGTTTCTTTATCTCTCAAGGGGTTTCAGGGTTTTTTTCTCGACTCTCTGCTTCTTGGGTTTTGTTGATTTTGCTCCGATTTTGATGGGCCTCTCTTCGTTTTTAATTTCCCCTCTAGGGTTCTGAGATCGATCCTTTGTTTTTCCTGTATTGGTCTCTTATGTTCGTGATCGTTTATTGTTGAAAATTGTGTGCTTTCTCCTTCAGAGTTTTGAGTTTTAGACTACATGGTTGTTTTTGTTCTATGTTGCCTATTAGGGTAGTAGCTTGATGGGTATATTGGGTAAGAAAGAGGCGTTTATTGGCTTGAGGGTAAATTTTTAGATTATATTTTATATTATAACACTATTATGAGATCTTCTTGCATTCCAATGTTATGTAGGGCAGAGGCTCCTTTTGATCATGCATGCTTATCTATCTCTTTTGTTCTTTTAATTTCACCTATCTTCTTAATGTTGGCCTTTTCTGCTCATCCTATTATAAGTATTTGTTTAGTAGATTATATGGATATCATAAAGCAAATTTCTATAGTGCTGACTAGCCAAGTTCTTTGATAGGAATAATATTTTTTCTCTGCTTGTGACTCTTTAGTTGAAATCAAATTTATGCATTTTCAAGTCTTGATTTTCTGATTCTCAAGTATTTTTGGCAATCAATAATGGTGCTGAAACGATTGATTGAGTACAAATTTCATGTTAGTGAGCATGTAGCCACTTAGTGACCAACAGACTTTCTAGGATATGTGTTCAAACCAATTTATGTGCATAATTTTTGTCCCATTTCATTGATATTGTTGGCGTTTTTTTTGTGATATTTTAATTTTTGATGATGTTTTCATATTTTAATTATTATTATATGTTGTCTTTTTTTGCATAGAAGACATCTTGTCCGGGAGTCAAAGGCCTCTACCCTGATCTTCAAGGTGTGATGGCTTCCAAACGTTAAAAGACCTGCAAAAGGGACCCTCCTGTTTCTTGCAGCGCTGGTTTGTACTGAGCACTTGATCTTTCTAATTTTGCATGCAAAGTCATTTGTTGCAATGATTGAGCTTTCATCTGGAGCCATGACGAGTTATTTTGAAACAATTTTTTTGTTGCTCTTGATAATGCCTTTGCATATGCTTGTTAATATCATCAAGAAAGCTGTGTTGCATGACTAAGATCCCATTGGGCTGCCATGTTGAATTATTTGTAATGTCAAATTCTGTATGGAATTATGGATAATGGCCCTGCTTATGTTTGGTAAAAAGTTCCGATTAGTTTTGTTGATTTATACCATGCCTTTGTTATTTTTGGATCCTTACATTGTTCTGATGTTTGGAGGTTGCATGGGATTTTGTTCTCATGGATGTGGTATTATGGGATTCTATTTTATGGATTTAGTTTCTAGGGAAATTGGTGTCTGAGCATAACTGAGTTTTTATGTCATGTGTATAATGGCTCATCTAACTCCAGAACTTGTGAGCATGTAGCCACTTAGTGACTAACAGACTTTCTAGAATATGTGTCCAAACCAATTTATGTGCATAATTTTTGTCCCATATCATTGATATTATTGGCGTTTTTTTTTCTCCTCTTTCTTCCTTTCTTTTTGTGATATTTTAATTTTTGATGATGTTTTCATATTTTAATTATTATCATATGTTGTCTTTTTTTTTTTGCATAGAAGACATCTTGTCCAGGAGTCAAAGGCCTCTACCCTGATCTTCAAGGTGTGATGGCTTCCAAACGTATTGCCAAGGAGTTAAAAGACCTGCAAAAGGACCCGCCTGTTTCTTGCAGCGCTGGTTTGTACTGAGCACTTGATCTTTCTAATTTTGCATGCAAAGTCATTTGTTGCAATGATTGAGCTTTCATCTAGAGCCATGACGAGTTATTTTGAAACAATTTTTTTGTTGCTCTTGATAATGCCTTTGCATATGCTTGTTAATATCATCAAGAAAGCTGTGTTGCATGACTAAGATCCCATTGGGCTGCCATGTTGAATTCTTTGTAATGTCAAATTCTGTATGGAATTATGGATAATGGCCCTGCTTATGTTTGGTAAAAAGTTCCGATTAGTTTTGTCGATTTATACCATGCCTTTGTTATTTTTGGCTCCTTACATTGTTCTGATGTTTGGATGTTGCATGGGATTTTGTTCTCATGGATGTGGTATTATGGGATTTTATTTTAGGGATTTAGTTTCTAGGGAAATTGATGTCTGAGCATAACTGAGTTTTTATGTCATGTGTATAATGGCTCATCTAACTCCAGAACTTGTGAGTTACTTCATGCTCGTCTTTCTCTGTTGAATGTTTTCTTTTGATACCATTATTTACAGGTCCTGTTGGTCAATATATGTTTCATTGGCACCCAACAATTATGGGTCCAGCAGACAGCCCTTATACTGGGGGAGTATTTTCAATGAACATTCACTTTCCACCAGATTCTCCCTTTAAACCACCAAAGGTATTAAATCCTTCCTTGCTCTGTCAGTCTTCTTCTATTTTCTTTTCCTCATGA

mRNA sequence

ATGAAGCGAGCGTTTTACCTTTTCATTTTCTTCATCGCTCAGACAGGGAGAACAGAGACAGACACAGGAGTCAAAGGCCTCTACCCTGATCTTCAAGGTGTGATGGCTTCCAAACGTATTGCCAAGGAGTTAAAAGACCTGCAAAAGGACCCGCCTGTTTCTTGCAGCGCTGGTCCTGTTGGTCAATATATGTTTCATTGGCACCCAACAATTATGGGTCCAGCAGACAGCCCTTATACTGGGGGAGTATTTTCAATGAACATTCACTTTCCACCAGATTCTCCCTTTAAACCACCAAAGGTATTAAATCCTTCCTTGCTCTGTCAGTCTTCTTCTATTTTCTTTTCCTCATGA

Coding sequence (CDS)

ATGAAGCGAGCGTTTTACCTTTTCATTTTCTTCATCGCTCAGACAGGGAGAACAGAGACAGACACAGGAGTCAAAGGCCTCTACCCTGATCTTCAAGGTGTGATGGCTTCCAAACGTATTGCCAAGGAGTTAAAAGACCTGCAAAAGGACCCGCCTGTTTCTTGCAGCGCTGGTCCTGTTGGTCAATATATGTTTCATTGGCACCCAACAATTATGGGTCCAGCAGACAGCCCTTATACTGGGGGAGTATTTTCAATGAACATTCACTTTCCACCAGATTCTCCCTTTAAACCACCAAAGGTATTAAATCCTTCCTTGCTCTGTCAGTCTTCTTCTATTTTCTTTTCCTCATGA

Protein sequence

MKRAFYLFIFFIAQTGRTETDTGVKGLYPDLQGVMASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDSPFKPPKVLNPSLLCQSSSIFFSS

Homology

[Close]

BLAST of Spg025774 vs. NCBI nr
Match: XP_038898845.1 (ubiquitin-conjugating enzyme E2 5B-like isoform X1 [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 25  KGLYPDLQGVMASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVF 84
           +GLYP LQGVMASKRIAKELKDLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY GG+F
Sbjct: 13  RGLYPALQGVMASKRIAKELKDLQKDPPVSCSAGPVGQNMFHWQATIMGPADSPYAGGLF 72

Query: 85  SMNIHFPPDSPFKPPKV 102
           S+NIHFPPD PFKPPKV
Sbjct: 73  SVNIHFPPDYPFKPPKV 89

[Close]

BLAST of Spg025774 vs. NCBI nr
Match: KAG6592228.1 (Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.4 bits (376), Expect = 1.9e-32
Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 24  VKGLYPDLQGVMASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGV 83
           V+GLYP LQG MASKRIAKEL+DLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY+GG+
Sbjct: 53  VRGLYPALQGAMASKRIAKELRDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYSGGI 112

Query: 84  FSMNIHFPPDSPFKPPKV 102
           FS+NIHFPPD PFKPPKV
Sbjct: 113 FSVNIHFPPDYPFKPPKV 130

[Close]

BLAST of Spg025774 vs. NCBI nr
Match: XP_038898846.1 (ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_038898847.1 ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_038898848.1 ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRIAKELKDLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY GG+FS+NIHFPPD 
Sbjct: 1   MASKRIAKELKDLQKDPPVSCSAGPVGQNMFHWQATIMGPADSPYAGGLFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. NCBI nr
Match: XP_022131792.1 (ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia] >XP_022131794.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia])

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRIAKELKDLQKDPPVSCSAGPVGQ MFHW+ TI+GPADSPY GGVFS+NIHFPPD 
Sbjct: 1   MASKRIAKELKDLQKDPPVSCSAGPVGQDMFHWNATIIGPADSPYAGGVFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. NCBI nr
Match: XP_022932545.1 (ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022932546.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022932547.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022976944.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_022976945.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_022976946.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita maxima] >XP_023535751.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo] >XP_023535752.1 ubiquitin-conjugating enzyme E2 28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-27
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRIAKEL+DLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY+GG+FS+NIHFPPD 
Sbjct: 1   MASKRIAKELRDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYSGGIFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy Swiss-Prot
Match: Q8S920 (Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5A PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 55/67 (82.09%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPVG+ MFHW  TIMGP+DSPY GGVF + IHFPPD 
Sbjct: 1   MASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-27
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP+DSPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-27
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP+DSPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-27
Identity = 54/67 (80.60%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP DSPY GGVF ++IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-27
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGPA+SPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy TrEMBL
Match: A0A6J1IA05 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111471432 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MAS+RIAKELKDLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY GGVFS+NIHFPPD 
Sbjct: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAGGVFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy TrEMBL
Match: A0A6J1IKW1 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111477162 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRIAKEL+DLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY+GG+FS+NIHFPPD 
Sbjct: 1   MASKRIAKELRDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYSGGIFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy TrEMBL
Match: A0A6J1BS08 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Momordica charantia OX=3673 GN=LOC111004866 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRIAKELKDLQKDPPVSCSAGPVGQ MFHW+ TI+GPADSPY GGVFS+NIHFPPD 
Sbjct: 1   MASKRIAKELKDLQKDPPVSCSAGPVGQDMFHWNATIIGPADSPYAGGVFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy TrEMBL
Match: A0A6J1EWM9 (ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC111439039 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRIAKEL+DLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY+GG+FS+NIHFPPD 
Sbjct: 1   MASKRIAKELRDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYSGGIFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. ExPASy TrEMBL
Match: A0A6J1EVG1 (ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC111438420 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.1e-27
Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MAS+RIAKELKDLQKDPPVSCSAGPVGQ MFHW  TIMGPADSPY GGVFS+NIHFPPD 
Sbjct: 1   MASRRIAKELKDLQKDPPVSCSAGPVGQDMFHWQATIMGPADSPYAGGVFSVNIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 121.3 bits (303), Expect = 5.1e-28
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP+DSPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 121.3 bits (303), Expect = 5.1e-28
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP+DSPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 121.3 bits (303), Expect = 5.1e-28
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP+DSPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

[Close]

BLAST of Spg025774 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 121.3 bits (303), Expect = 5.1e-28
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGP+DSPY+GGVF + IHFPPD 
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 91  PFKPPKV 97

[Close]

BLAST of Spg025774 vs. TAIR 10
Match: AT5G41700.2 (ubiquitin conjugating enzyme 8 )

HSP 1 Score: 120.9 bits (302), Expect = 6.7e-28
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 35  MASKRIAKELKDLQKDPPVSCSAGPVGQYMFHWHPTIMGPADSPYTGGVFSMNIHFPPDS 94
           MASKRI KELKDLQKDPP SCSAGPV + MFHW  TIMGPA+SPY+GGVF + IHFPPD 
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 95  PFKPPKV 102
           PFKPPKV
Sbjct: 61  PFKPPKV 67

The following BLAST results are available for this feature:

BLAST of Spg025774 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898845.1	1.4e-32	88.31	ubiquitin-conjugating enzyme E2 5B-like isoform X1 [Benincasa hispida]	[more]
KAG6592228.1	1.9e-32	85.90	Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_038898846.1	1.8e-27	89.55	ubiquitin-conjugating enzyme E2 5B-like isoform X2 [Benincasa hispida] >XP_03889...	[more]
XP_022131792.1	2.4e-27	89.55	ubiquitin-conjugating enzyme E2-17 kDa-like [Momordica charantia] >XP_022131794....	[more]
XP_022932545.1	2.4e-27	88.06	ubiquitin-conjugating enzyme E2 28-like [Cucurbita moschata] >XP_022932546.1 ubi...	[more]

BLAST of Spg025774 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S920	1.9e-27	82.09	Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica OX=39947 GN=U...	[more]
Q94F47	7.2e-27	80.60	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35132	7.2e-27	80.60	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
P35135	9.4e-27	80.60	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35131	9.4e-27	80.60	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]

BLAST of Spg025774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IA05	1.1e-27	89.55	ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1IKW1	1.1e-27	88.06	ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita maxima OX=3661 GN=LOC111477...	[more]
A0A6J1BS08	1.1e-27	89.55	ubiquitin-conjugating enzyme E2-17 kDa-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1EWM9	1.1e-27	88.06	ubiquitin-conjugating enzyme E2 28-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1EVG1	1.1e-27	89.55	ubiquitin-conjugating enzyme E2 5B-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Spg025774 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64230.1	5.1e-28	80.60	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	5.1e-28	80.60	ubiquitin-conjugating enzyme 28	[more]
AT4G27960.1	5.1e-28	80.60	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	5.1e-28	80.60	ubiquitin conjugating enzyme 9	[more]
AT5G41700.2	6.7e-28	80.60	ubiquitin conjugating enzyme 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 27..109 e-value: 4.1E-25 score: 90.1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 33..102
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 39..101 e-value: 9.4E-16 score: 57.7
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 35..117 score: 25.111111
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 37..101 e-value: 3.44987E-27 score: 95.7321
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 37..102
None	No IPR available	PANTHER	PTHR24068:SF322	UBIQUITIN-CONJUGATING ENZYME E2 28-LIKE	coord: 37..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025774.1	Spg025774.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016740	transferase activity