Spg025747 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAGGGAAGAATGGCGGGATTTGAAGGCGTGGGGCAGAGCAAAGAGCAAGCGGAGATGTCATTTGCTGCTATTAGAGACCAGTGGGAAGTTCACTTCTCTCGCTTCGTTTGCTATCCAAGTTGCACCTCCACCAACATCCACCTCCGTCCTCTTCTCAATGCTCGAAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCGTTCCTGCAACTCCTCCACCATCGCTCCACCTCCGATTTGATTCTCGCCATACGCTTACGCGATAAGATCCTTGTGAGTTCTTAATTTTCCACTCTTCTCTCCAAGTTTCTACTCGCAATCTGTATGTATCATTAAGTTTGACAGAGAGGAAATGTTTCTTTCCGCTGAACATTATACGTTCGCTTCTTCAAATTCCTCGAACTGTGTCCTTCACGGATTTAGTGAATTTCCTATTGTATTTCTTTAGCCATTGGTTTAAATTCATGTAGTTTCTTATTAATGCCCCTGAAATCAACAAGATCTTATGCTAGCCTCCGCCTAAGGAGCTGATCTCTTGTTTGTTTTCTTCTTTTTACCCCATTACCCTCTCCGCATGGTTGACCAGGCTGCTTGTTGACCTCACTGTATTCCATTTATTCTACATTAGCGAATCCTGTGGACGGTGAGAAATCCTACGTGGTGAGATGATTTTGTGAAATGAAGCATGTTTCCTCTGGAAATTCAAATGCAGCTCTTGTATTGAGTTCAGTCGTTTAATGCAATAGTATTCTGCCAAAAGACCAATCTAAGACTCAATTTCTATTATTTGGACGTGTTAATCGCAATGGATGAAGCATGTCTTATTTGTATACTGATGTAGGAAGAGCACTACCTCTCCAAGCTGCATTTCTCATGGCCTCAGGTGTCCTGTATCTCTGGTTTTCCAGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTGACGAGGCAAGTCATAATATGTTCTTCAGATTTTGTTAATTTCTGTGGTGCAATGAGATCTCAAACGAAGTAGTTTTCTGAAGATGAGTGTGCGTTGTTGAACCTCACAAGTCACGAGGGCACTGTTTTTCTTTGCAGATCCAAAAGTTTGCCCTAAGATTTTCAACATCGCACGAAACTGATTCATTTGTGAACATTCTCAAGGTATTTGATATGAATTCCTTTTATGGTAAGGTTTAATGGAAGATACTTTTATTCTAAAAGTTTGCTGCTGCTGCTATGCTATTCTCCTGTTTCAGGAAATGTCGAAGGATGCAAGAGATATACAACCAATAAGCTGCGACTTCGGGTCTCAGATTTCAACACAGTCTGAGTTATTATCTTCAAATGGACCATCTGATAGGTAAATTGAAATTCTCTAATAATCTAATGCATCATTTTCTTTTTTAATAGTCAGACTCACAGAGAGAGAGAGATTGATGTATCTTATGTTTCTAGCCTTTCTGAAGAATTGAGCAATTCCACCGTCCTCCAGCCTTACACCCCGGAAATGCCTTTGAGTTTAAAAGATAGTGTAGAGACATACTCATGTTCTCAGGAAAATGCACATCTTGACCACTTAGAAAGCATATTTGCAGCCTTACCTCCCAGTTTTACGTCTATGCTATCAAACTGTTCGGATGTCAAACAAGGTAGAGTGCTATGACAAATTTTAGAACAAAAAAATATTTCAAATCATCGTAATGACCAATTTCCTTCTTATAAGGTCAAACTGCAACGCCGCCATCTGCTGCAAAGGATAATGATCTAAAGTCTCAAATCATGGTATGTTCCACTGTTACCAAATGGAATTTCTTTTGTTGATGCTTTGCTTACTATTAAATGGTTTGATTAAACATTGAAAATTTGGCATGAACTCAATATTGTACATTTCCAAATAGCATTATTGAATTTTTAATTTATTGAATTTGTTTTGGGACAGAAATGTATGGAAGATTCTTCCTTTCAAGGTACGGCTATATCAACACTTATAAATCTAAACTTGCAAATGTTTCCATGATCCCCTGCATTTTAGAAACTATTTTAGTCAATTCAACATGCTAGAGTTGGTTCTGTGAAATTTTTAACCAGATTGTGAAAAAGTTGTCTTAGTCTCCAGTAAATTTTATATTACTAATGTAAAAGTATATATAGACTAAGCTTATGACTGTAACTAAACTTAACAGAGAGCTTAACAAAATGACTAATTACACAACAGAAAATAACAGAAATTATAATTATAAATGAAACAAAAGGTAAACTATAAGTTAGACAATATTCTGCAGGTCTAATTTCAGAATACGCATTTTATTTGTTTTATCTGATTTATTTTCCTTTTTGGGCTGGGCTTAGTTTTCTGTTTAGGCTCGTTTCTGAAGCCTGTGAACCGTTAACCTATTGACATCTGCTGCGTTGGGCCTATTTAAGGCTTTTCTCCTGTATATTTTCAGTCAGCTCAATAATACACATCATTTGTACCAAAAAAGAAAACATTTCAACAATCAGATTACGTTACAAGAGCTAGTAATAGAATTTTGAAGTGCACATCAGCTTCATTAGATTAGATGCCTACGTTGGAGTTGGACAATGCTGTAAATTTCTCTAACTTACCGTTGCAATATCTCTCTATATGTGCCTACTTTTTGTTTAACGGGATGCAATTTCAAATTATACATTTCCAGGCCAACAAGTAAATTATTTATTTGTACATAACTGTAACATTAGATACTGATCTATCGGTTCAAATTCTTGGTGGTTTCCAGATATGTTGAACAGGGTTGAGAAAATTGTGAACGAAATTGGAGGTGATTTGGCGCTGTAGTTCTCAGGGTAATATGCATAACACTTGACGACGTTAGATATCTTTTCATTGGCCCCCAGCCGTGGCCATATTATCTAATATCTTACACATTCTAGTTAGCACTTATCGTCATCCTCTTTTCCCGTCTTATACACGGAATATTCGAGTTAATTTGACATTTCATTGGCCTCTTAATTCTCTTGTTGATAATTGGGAAAAATTAGTAGATTGAATAGAATTATAAATATTGTGGTTATAGATTTCCTTTATGTTTAGAAAATTAGAGTTTTCGTGATTGAAACTGAGTCCTGAACAGTCTCCTTTAAAATAAATAAAATAATATATGAAGGAAATCCATTGCTTAAAGGATATTATGAAAAATTTCTAGTAGTATTCTCATATAATTCTTAAATACTACTATTGTGGCAATGAATTAATAGAGTACTAGAATTTTTTCCAAAGAAATTATGTGATTTGTTTAATTGCACCATACATGTCATCCCCACAGGACTGATTGATGCCAAGATAAGCGTAAGTACTAAACTTTCAGCATCGAAGATCGTATGGCGAATTTGGCTGACGGAGAATAAATGAAGGGCCAAACATTTCAGCGTTGGACCGCAAAAACAAAAACAGTGGCACTGTCCCCAAAAAGTGGCAGCATCTCACTCTTGGATTTAGATCGACACTGACTTGGAAAAATGTTTTTGCAATTCACGCCTTGTGAGTATCTGAACTATATAACAATTAACACATCACTATTGAATCACTCACCCGAGAACGCTGCTATGATGTTTTTACTTATTAGATTCAAAATCTTTAGATGTAGTGTTACACATGTTTGTCCGG ATGGCGGGATTTGAAGGCGTGGGGCAGAGCAAAGAGCAAGCGGAGATGTCATTTGCTGCTATTAGAGACCAGTGGGAAGTTCACTTCTCTCGCTTCGTTTGCTATCCAAGTTGCACCTCCACCAACATCCACCTCCGTCCTCTTCTCAATGCTCGAAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCGTTCCTGCAACTCCTCCACCATCGCTCCACCTCCGATTTGATTCTCGCCATACGCTTACGCGATAAGATCCTTCGAATCCTGTGGACGGTGAGAAATCCTACGTGGAAGAGCACTACCTCTCCAAGCTGCATTTCTCATGGCCTCAGGTGTCCTGTATCTCTGGTTTTCCAGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTGACGAGGCAAATCCAAAAGTTTGCCCTAAGATTTTCAACATCGCACGAAACTGATTCATTTGTGAACATTCTCAAGGAAATGTCGAAGGATGCAAGAGATATACAACCAATAAGCTGCGACTTCGGGTCTCAGATTTCAACACAGTCTGAGTTATTATCTTCAAATGGACCATCTGATAGCCTTTCTGAAGAATTGAGCAATTCCACCGTCCTCCAGCCTTACACCCCGGAAATGCCTTTGAGTTTAAAAGATAGTGTAGAGACATACTCATGTTCTCAGGAAAATGCACATCTTGACCACTTAGAAAGCATATTTGCAGCCTTACCTCCCAGTTTTACGTCTATGCTATCAAACTGTTCGGATGTCAAACAAGGTCAAACTGCAACGCCGCCATCTGCTGCAAAGGATAATGATCTAAAGTCTCAAATCATGAAATGTATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGGGTTGAGAAAATTGTGAACGAAATTGGAGGTGATTTGGCGCTGTAG ATGGCGGGATTTGAAGGCGTGGGGCAGAGCAAAGAGCAAGCGGAGATGTCATTTGCTGCTATTAGAGACCAGTGGGAAGTTCACTTCTCTCGCTTCGTTTGCTATCCAAGTTGCACCTCCACCAACATCCACCTCCGTCCTCTTCTCAATGCTCGAAATCGCCCGCCTCGAGGCACATGGATCTCTTCGTCTTCCACTGCGTTCCTGCAACTCCTCCACCATCGCTCCACCTCCGATTTGATTCTCGCCATACGCTTACGCGATAAGATCCTTCGAATCCTGTGGACGGTGAGAAATCCTACGTGGAAGAGCACTACCTCTCCAAGCTGCATTTCTCATGGCCTCAGGTGTCCTGTATCTCTGGTTTTCCAGCCAGAGGCACCAGAACTATTTTTGGAAGTTATAGAGATTCAGCTGACGAGGCAAATCCAAAAGTTTGCCCTAAGATTTTCAACATCGCACGAAACTGATTCATTTGTGAACATTCTCAAGGAAATGTCGAAGGATGCAAGAGATATACAACCAATAAGCTGCGACTTCGGGTCTCAGATTTCAACACAGTCTGAGTTATTATCTTCAAATGGACCATCTGATAGCCTTTCTGAAGAATTGAGCAATTCCACCGTCCTCCAGCCTTACACCCCGGAAATGCCTTTGAGTTTAAAAGATAGTGTAGAGACATACTCATGTTCTCAGGAAAATGCACATCTTGACCACTTAGAAAGCATATTTGCAGCCTTACCTCCCAGTTTTACGTCTATGCTATCAAACTGTTCGGATGTCAAACAAGGTCAAACTGCAACGCCGCCATCTGCTGCAAAGGATAATGATCTAAAGTCTCAAATCATGAAATGTATGGAAGATTCTTCCTTTCAAGATATGTTGAACAGGGTTGAGAAAATTGTGAACGAAATTGGAGGTGATTTGGCGCTGTAG MAGFEGVGQSKEQAEMSFAAIRDQWEVHFSRFVCYPSCTSTNIHLRPLLNARNRPPRGTWISSSSTAFLQLLHHRSTSDLILAIRLRDKILRILWTVRNPTWKSTTSPSCISHGLRCPVSLVFQPEAPELFLEVIEIQLTRQIQKFALRFSTSHETDSFVNILKEMSKDARDIQPISCDFGSQISTQSELLSSNGPSDSLSEELSNSTVLQPYTPEMPLSLKDSVETYSCSQENAHLDHLESIFAALPPSFTSMLSNCSDVKQGQTATPPSAAKDNDLKSQIMKCMEDSSFQDMLNRVEKIVNEIGGDLAL Homology
BLAST of Spg025747 vs. NCBI nr
Match: XP_023538055.1 (protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo] >XP_023538056.1 protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.4 bits (1043), Expect = 2.3e-109 Identity = 230/321 (71.65%), Postives = 247/321 (76.95%), Query Frame = 0
BLAST of Spg025747 vs. NCBI nr
Match: XP_022951934.1 (protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita moschata]) HSP 1 Score: 400.6 bits (1028), Expect = 1.2e-107 Identity = 229/327 (70.03%), Postives = 246/327 (75.23%), Query Frame = 0
BLAST of Spg025747 vs. NCBI nr
Match: KAG6585176.1 (Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 399.1 bits (1024), Expect = 3.6e-107 Identity = 230/327 (70.34%), Postives = 250/327 (76.45%), Query Frame = 0
BLAST of Spg025747 vs. NCBI nr
Match: KAG7020096.1 (Protein POOR-likeOUS SYNAPSIS 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 399.1 bits (1024), Expect = 3.6e-107 Identity = 231/329 (70.21%), Postives = 248/329 (75.38%), Query Frame = 0
BLAST of Spg025747 vs. NCBI nr
Match: XP_023002655.1 (protein POOR HOMOLOGOUS SYNAPSIS 1 [Cucurbita maxima]) HSP 1 Score: 396.4 bits (1017), Expect = 2.3e-106 Identity = 229/324 (70.68%), Postives = 249/324 (76.85%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy Swiss-Prot
Match: Q45GQ7 (Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Arabidopsis thaliana OX=3702 GN=PHS1 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.8e-23 Identity = 116/373 (31.10%), Postives = 164/373 (43.97%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy Swiss-Prot
Match: Q6W2J0 (Protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Zea mays OX=4577 GN=PHS1 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 5.0e-11 Identity = 87/342 (25.44%), Postives = 148/342 (43.27%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy TrEMBL
Match: A0A6J1GK72 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Cucurbita moschata OX=3662 GN=LOC111454670 PE=4 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 6.0e-108 Identity = 229/327 (70.03%), Postives = 246/327 (75.23%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy TrEMBL
Match: A0A6J1KPK1 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Cucurbita maxima OX=3661 GN=LOC111496445 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106 Identity = 229/324 (70.68%), Postives = 249/324 (76.85%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy TrEMBL
Match: A0A6J1BQX6 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Momordica charantia OX=3673 GN=LOC111004631 PE=4 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.4e-104 Identity = 217/316 (68.67%), Postives = 243/316 (76.90%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy TrEMBL
Match: A0A7N2L9L7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.8e-51 Identity = 135/300 (45.00%), Postives = 183/300 (61.00%), Query Frame = 0
BLAST of Spg025747 vs. ExPASy TrEMBL
Match: A0A2I4DDJ4 (protein POOR HOMOLOGOUS SYNAPSIS 1 OS=Juglans regia OX=51240 GN=LOC108979080 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 8.8e-51 Identity = 137/305 (44.92%), Postives = 185/305 (60.66%), Query Frame = 0
BLAST of Spg025747 vs. TAIR 10
Match: AT1G10710.2 (poor homologous synapsis 1 ) HSP 1 Score: 109.0 bits (271), Expect = 7.0e-24 Identity = 116/373 (31.10%), Postives = 164/373 (43.97%), Query Frame = 0
BLAST of Spg025747 vs. TAIR 10
Match: AT1G10710.1 (poor homologous synapsis 1 ) HSP 1 Score: 106.3 bits (264), Expect = 4.5e-23 Identity = 115/371 (31.00%), Postives = 162/371 (43.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|