Spg025547 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAATCCAACGGTGAAGATTAGTATTGAAATACGCAGTTTCTCGAAGAGGAGCCTGGCTTAGATTTGGGAACAAGAACCAACCCCTCTCGATCGAGAAGCCGCCCTCTTCATAAGACTCGCTTGAGGCTTTCGATAACTGCGTTTGAAGTTGAAGATTTGGGATTGCGATGGGGAAGCAACCAGTCCGGATGAAGGCTGTGGTCTACGCTTTATCGCCGTTCCAGCAGAAGATCATGACAGGGTTATGGAACGACTTGACCGGCAAGATCCACCATAAGATCTCCGAGAACTGGATCAGTGCCGCTCTTCTAATTACTCCCGTCCTCGGCACCTACACGTAATTTTTCCATCTCCTCGTTCCATTCCATCTTTTTCTTATTTTTGAAATTTCGAATTTAGGGTTTGCTTCTTGGTGAATGGTTTCCTCTTTTCATATTTCAATCTGCTATCAATTTTTTTTTTTTAAATTAAGTCTTCATGTGTTTCTCGATGAGCTTGGTAGCTTCGTATTTTCATAACACTTGGTCGGATTTAATTTAGATGAGATGTCTCCTGATCGGATTCAAAGTGGGAGTGCACAATTCCTCCTACATAGGTTTCTTGTAATGATTTGGTATTTTCTGGACGTAGCCTTAAGATCTAAAGTGTTTAATATTTTCCTCGAAGTTAATCATGTTTTTAATATTCATGACTCTGAAATTTTCTTCTGGAACTGAGCAAGAACAGTTGATATATTGCATCTTATTGCGCATTCAGGTTTGATTGATTGTTTTGTTTGTTGGAATGGAATAGAAAGCTCGGTGATTTTTCTTCTTTTTTGGGGGGCGAATGTTCCCGTGATGGTGTTATTGTCCTTAATTGCAAGTGTTCATTTCTGTTTTTGATTATATATTATCAGTTAGGCGTTGCCTTGCTTGACTGAAAGTGATCCCAAACCATGTCAATCAGATTTTCCACGACTCTTCCTACATCTGTGTGGTGAATCCTAGTTTTTAATAATCTCCAATTACTTTGGTCTATTTTTAATTCATTCTATTTTGTCATTGAAGAGAAGTATTAGTTCTGTTGTGCATAGGGTTGACGAAACGTTGTTTTTAAGAATTCTTTAGCACTTGATGTGATCGTTTGATGGGCATTTTTTTTTTTTTTGTTATAATTAAAATTTCCCCTTTCAATTGAATTTTGCATCTTGCATCAACATATAAAAGATGTATCATGCCAGTGTTGGCGGTAGACAAATCTAATCGATGCGCGTCACTTTTGAACTTCGATTGAAGTATCGTTTGCATATACATACATGTATAAGATAAATGACTTAGTTGATTGATTGGTAGAAAATGTGAAACGATGGTTGATGAGCATTTAGATATATCTTTCACTTGTTTTTCTTTGATTTAATGTCGACCTCCCACGCATTCAAGGCATCATGTCTGCAAATGGATGCAGGTATGCACAGCAGTACAAGGAGAATGAAAAGCTGTCTCACAGGTACTGAAGGCGCATGGTTCCTGGATTTTCCATCTACCTTGAAGAACTTTTGAACTTCTGACTTTTTCGTTATGCAAATGAAGTTCTGGTTTCTTAGACTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCGCTTGTTTGTTGGAATAAATTTACAACATTTTTTGTTTTTGATCATGTGAAGACTGTTATATAAAGATCAGTGGAACATGCACTGGAATGGCGTTAACTGATGAACAGCCAAGCTTTAGACTCCGATTAG ATGGGGAAGCAACCAGTCCGGATGAAGGCTGTGGTCTACGCTTTATCGCCGTTCCAGCAGAAGATCATGACAGGGTTATGGAACGACTTGACCGGCAAGATCCACCATAAGATCTCCGAGAACTGGATCAGTGCCGCTCTTCTAATTACTCCCGTCCTCGGCACCTACACGTATGCACAGCAGTACAAGGAGAATGAAAAGCTGTCTCACAGCCAAGCTTTAGACTCCGATTAG ATGGGGAAGCAACCAGTCCGGATGAAGGCTGTGGTCTACGCTTTATCGCCGTTCCAGCAGAAGATCATGACAGGGTTATGGAACGACTTGACCGGCAAGATCCACCATAAGATCTCCGAGAACTGGATCAGTGCCGCTCTTCTAATTACTCCCGTCCTCGGCACCTACACGTATGCACAGCAGTACAAGGAGAATGAAAAGCTGTCTCACAGCCAAGCTTTAGACTCCGATTAG MGKQPVRMKAVVYALSPFQQKIMTGLWNDLTGKIHHKISENWISAALLITPVLGTYTYAQQYKENEKLSHSQALDSD Homology
BLAST of Spg025547 vs. NCBI nr
Match: XP_038886592.1 (cytochrome b-c1 complex subunit 8-like [Benincasa hispida]) HSP 1 Score: 144.4 bits (363), Expect = 4.0e-31 Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Spg025547 vs. NCBI nr
Match: XP_022131282.1 (cytochrome b-c1 complex subunit 8-like [Momordica charantia]) HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Spg025547 vs. NCBI nr
Match: XP_022951208.1 (cytochrome b-c1 complex subunit 8-like [Cucurbita moschata] >XP_023002778.1 cytochrome b-c1 complex subunit 8-like [Cucurbita maxima] >XP_023537368.1 cytochrome b-c1 complex subunit 8-like [Cucurbita pepo subsp. pepo] >KAG6585163.1 Cytochrome b-c1 complex subunit 8-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020083.1 hypothetical protein SDJN02_16765 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30 Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Spg025547 vs. NCBI nr
Match: XP_022961649.1 (cytochrome b-c1 complex subunit 8-like [Cucurbita moschata] >XP_022997627.1 cytochrome b-c1 complex subunit 8-like [Cucurbita maxima] >XP_023545652.1 cytochrome b-c1 complex subunit 8-like [Cucurbita pepo subsp. pepo] >KAG6598219.1 Cytochrome b-c1 complex subunit 8-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029201.1 hypothetical protein SDJN02_07538, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Spg025547 vs. NCBI nr
Match: XP_004142978.1 (cytochrome b-c1 complex subunit 8 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 2.2e-29 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy Swiss-Prot
Match: Q9SG91 (Cytochrome b-c1 complex subunit 8-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRQ-1 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.6e-28 Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy Swiss-Prot
Match: Q9FLB7 (Cytochrome b-c1 complex subunit 8-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRQ-2 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.6e-27 Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy Swiss-Prot
Match: P46269 (Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 117.5 bits (293), Expect = 6.8e-26 Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy TrEMBL
Match: A0A6J1K5M6 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111492502 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy TrEMBL
Match: A0A6J1KUK4 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111496537 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy TrEMBL
Match: A0A6J1BQK7 (cytochrome b-c1 complex subunit 8-like OS=Momordica charantia OX=3673 GN=LOC111004551 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy TrEMBL
Match: A0A6J1HEN4 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111462357 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Spg025547 vs. ExPASy TrEMBL
Match: A0A6J1GH36 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111454117 PE=3 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30 Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 0
BLAST of Spg025547 vs. TAIR 10
Match: AT3G10860.1 (Cytochrome b-c1 complex, subunit 8 protein ) HSP 1 Score: 124.4 bits (311), Expect = 4.0e-29 Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Spg025547 vs. TAIR 10
Match: AT5G05370.1 (Cytochrome b-c1 complex, subunit 8 protein ) HSP 1 Score: 121.7 bits (304), Expect = 2.6e-28 Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|