Spg025477 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg025477
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Locationscaffold13: 31016600 .. 31017599 (-)
RNA-Seq ExpressionSpg025477
SyntenySpg025477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATGCAGATGGCACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCTGTTACATTTGGTTCAAGCAGGTGGATGGCGGGCTGACAATGGGACCTTTAGATCGGGGTACTTGCAACAAGTACAGAAGTTGATGAAAGAGAAATTGCCAGGATGCGACATACAAGTAACGCCGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATACGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAGGCAGAGAAATCGGTCTTCGATGATTGGGTTAGGGTAACAATTCAAACTTAATCCATGTACAGTTCATGAATAAAATGTTATACGATCATGTATGTTAATTGTGTTAGCATGTTGAATACAGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAGGGCCAATGGAGAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTAAACCTGTGGTAGGTGAAGAATTTTATATCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACGGGGAAGTAAGAGGAGGCGCACAGTACCAACAGACGCTGTCGATACATTTCGCACAAAGATGCGTTATGTGTCCACGCAAATCGAGAAGATCGCACTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGACGATTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCTACTGAATGGAAGTATAAGTGCTGCATGCGTATCTTGGGAAGACAGCCATGA

mRNA sequence

ATGTTGATGCAGATGGCACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCTGTTACATTTGGTTCAAGCAGGTGGATGGCGGGCTGACAATGGGACCTTTAGATCGGGGTACTTGCAACAAGTACAGAAGTTGATGAAAGAGAAATTGCCAGGATGCGACATACAAGTAACGCCGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATACGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAGGCAGAGAAATCGGTCTTCGATGATTGGGTTAGGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAGGGCCAATGGAGAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTAAACCTGTGGTAGGTGAAGAATTTTATATCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACGGGGAAGTAAGAGGAGGCGCACAGTACCAACAGACGCTGTCGATACATTTCGCACAAAGATGCGTTATGTGTCCACGCAAATCGAGAAGATCGCACTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGACGATTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCTACTGAATGGAAGTATAAGTGCTGCATGCGTATCTTGGGAAGACAGCCATGA

Coding sequence (CDS)

ATGTTGATGCAGATGGCACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCTGTTACATTTGGTTCAAGCAGGTGGATGGCGGGCTGACAATGGGACCTTTAGATCGGGGTACTTGCAACAAGTACAGAAGTTGATGAAAGAGAAATTGCCAGGATGCGACATACAAGTAACGCCGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATACGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAGGCAGAGAAATCGGTCTTCGATGATTGGGTTAGGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAGGGCCAATGGAGAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTAAACCTGTGGTAGGTGAAGAATTTTATATCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACGGGGAAGTAAGAGGAGGCGCACAGTACCAACAGACGCTGTCGATACATTTCGCACAAAGATGCGTTATGTGTCCACGCAAATCGAGAAGATCGCACTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGACGATTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCTACTGAATGGAAGTATAAGTGCTGCATGCGTATCTTGGGAAGACAGCCATGA

Protein sequence

MLMQMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGCDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAARGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQP
Homology
BLAST of Spg025477 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 3.9e-82
Identity = 163/299 (54.52%), Postives = 202/299 (67.56%), Query Frame = 0

Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGC 64
           MA + SKA KH WT + DEVLV+CLL LV+ GGWRADNGTF+ GYL QVQKLMKEK+ G 
Sbjct: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAAR 124
           +IQVTPNL+SRV+ILK+QY A+ EMMGP CSGFGWN+ERKCIEAEKSVFDDWV+    AR
Sbjct: 61  NIQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVK---TAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVKPVV 184
            +                                   +DD++ ++ED  +P+P  ++P  
Sbjct: 121 DIE----------------------------------EDDMDINLEDFDIPNPHGLEPPS 180

Query: 185 GEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQHKDEIE 244
           GE+   T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W + K EIE
Sbjct: 181 GEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIE 240

Query: 245 SARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQP 304
           S+  K+LY +LQ+IPGMD+DDCL+VAE+LL D     +FLDYP EWKY+ CMRILGRQP
Sbjct: 241 SSLHKRLYVDLQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 261

BLAST of Spg025477 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 298.9 bits (764), Expect = 5.0e-77
Identity = 150/290 (51.72%), Postives = 189/290 (65.17%), Query Frame = 0

Query: 4   QMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPG 63
           +MA + SKA KH WT +EDEVLV+CLL LV+ GGWRADNGTF+ GYL             
Sbjct: 137 EMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------- 196

Query: 64  CDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAA 123
                            +QY A+ EMMGP CSGFGWN+ +KCIE EK VFDDWV+GHP A
Sbjct: 197 -----------------KQYTAIAEMMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNA 256

Query: 124 RGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPP 183
           +GL NKPFPYF DL +VFG+DRA G    TP EM++       +DD++ ++ED  +P+P 
Sbjct: 257 QGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPH 316

Query: 184 IVKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQ 243
            ++P  GE+   T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W +
Sbjct: 317 GLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQR 376

Query: 244 HKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT 289
            K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Sbjct: 377 EKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPT 396

BLAST of Spg025477 vs. NCBI nr
Match: TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.3 bits (695), Expect = 5.0e-69
Identity = 135/237 (56.96%), Postives = 169/237 (71.31%), Query Frame = 0

Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+  YL QVQKLMKEK+P  
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKSVFDDWV+GHP AR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

Query: 185 VKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALW 237
           ++P  GE+   T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 181 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237

BLAST of Spg025477 vs. NCBI nr
Match: XP_008455678.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 5.0e-69
Identity = 135/237 (56.96%), Postives = 169/237 (71.31%), Query Frame = 0

Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+  YL QVQKLMKEK+P  
Sbjct: 33  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 92

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKSVFDDWV+GHP AR
Sbjct: 93  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 152

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 153 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 212

Query: 185 VKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALW 237
           ++P  GE+   T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 213 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 269

BLAST of Spg025477 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-64
Identity = 129/222 (58.11%), Postives = 155/222 (69.82%), Query Frame = 0

Query: 4   QMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPG 63
           QMA   SK  KH WT +EDE LV+CLL LV+ G WR DNGTF+ GYL QVQKLMKEK+  
Sbjct: 85  QMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKILE 144

Query: 64  CDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAA 123
            +IQVTPNLES V+ILK+QY  + EMMGP CSGF WN ERKCIEAEKSV +DWV+GH  A
Sbjct: 145 SNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHLNA 204

Query: 124 RGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPP 183
           R L NKPFPYF DL IVFG+DRA G    TP EM +       +DD+  ++ED  +P+P 
Sbjct: 205 RYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTEEDDMIINLEDFDIPNPH 264

Query: 184 IVKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFR 221
            ++P  GE+   T +S     GSSR SK+RR+   D +DTFR
Sbjct: 265 GLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSRDLMDTFR 306

BLAST of Spg025477 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.9e-82
Identity = 163/299 (54.52%), Postives = 202/299 (67.56%), Query Frame = 0

Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGC 64
           MA + SKA KH WT + DEVLV+CLL LV+ GGWRADNGTF+ GYL QVQKLMKEK+ G 
Sbjct: 1   MASTNSKATKHRWTTI-DEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAAR 124
           +IQVTPNL+SRV+ILK+QY A+ EMMGP CSGFGWN+ERKCIEAEKSVFDDWV+    AR
Sbjct: 61  NIQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVK---TAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVKPVV 184
            +                                   +DD++ ++ED  +P+P  ++P  
Sbjct: 121 DIE----------------------------------EDDMDINLEDFDIPNPHGLEPPS 180

Query: 185 GEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQHKDEIE 244
           GE+   T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W + K EIE
Sbjct: 181 GEDMPSTPTSMAHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIE 240

Query: 245 SARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQP 304
           S+  K+LY +LQ+IPGMD+DDCL+VAE+LL D     +FLDYP EWKY+ CMRILGRQP
Sbjct: 241 SSLHKRLYVDLQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 261

BLAST of Spg025477 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 2.4e-77
Identity = 150/290 (51.72%), Postives = 189/290 (65.17%), Query Frame = 0

Query: 4   QMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPG 63
           +MA + SKA KH WT +EDEVLV+CLL LV+ GGWRADNGTF+ GYL             
Sbjct: 137 EMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLGYL------------- 196

Query: 64  CDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAA 123
                            +QY A+ EMMGP CSGFGWN+ +KCIE EK VFDDWV+GHP A
Sbjct: 197 -----------------KQYTAIAEMMGPACSGFGWNEGQKCIEVEKPVFDDWVKGHPNA 256

Query: 124 RGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPP 183
           +GL NKPFPYF DL +VFG+DRA G    TP EM++       +DD++ ++ED  +P+P 
Sbjct: 257 QGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLEDFDIPNPH 316

Query: 184 IVKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQ 243
            ++P  GE+   T +S     GSSR SK+RR+   D +DTFR  MR  S +I KIA W +
Sbjct: 317 GLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEIGKIATWQR 376

Query: 244 HKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT 289
            K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Sbjct: 377 EKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPT 396

BLAST of Spg025477 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 135/237 (56.96%), Postives = 169/237 (71.31%), Query Frame = 0

Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+  YL QVQKLMKEK+P  
Sbjct: 1   MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 60

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKSVFDDWV+GHP AR
Sbjct: 61  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 120

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 121 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 180

Query: 185 VKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALW 237
           ++P  GE+   T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 181 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237

BLAST of Spg025477 vs. ExPASy TrEMBL
Match: A0A1S3C252 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69
Identity = 135/237 (56.96%), Postives = 169/237 (71.31%), Query Frame = 0

Query: 5   MAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPGC 64
           MA + SKA KH WT ++D+ LV+CLL LV+ GGWRA+N TF+  YL QVQKLMKEK+P  
Sbjct: 33  MASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRS 92

Query: 65  DIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAAR 124
           +IQVT NLESRV+ LK+QY A+ +MMGP CS FGWN+ERKCIEAEKSVFDDWV+GHP AR
Sbjct: 93  NIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNAR 152

Query: 125 GLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPPI 184
           GL NKPF YF DL IVFG+D+A G       EMA+       +DD++ ++ED  +P+P  
Sbjct: 153 GLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTEEDDMDINLEDFDIPNPHG 212

Query: 185 VKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALW 237
           ++P  GE+   T  S     GSSR SK+RR+ P D +DTFR  M+  S +I KIA W
Sbjct: 213 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 269

BLAST of Spg025477 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.0e-64
Identity = 129/222 (58.11%), Postives = 155/222 (69.82%), Query Frame = 0

Query: 4   QMAPSTSKAPKHIWTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKLPG 63
           QMA   SK  KH WT +EDE LV+CLL LV+ G WR DNGTF+ GYL QVQKLMKEK+  
Sbjct: 85  QMASINSKVTKHWWTTIEDEALVECLLQLVEKGCWRVDNGTFKPGYLVQVQKLMKEKILE 144

Query: 64  CDIQVTPNLESRVRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAA 123
            +IQVTPNLES V+ILK+QY  + EMMGP CSGF WN ERKCIEAEKSV +DWV+GH  A
Sbjct: 145 SNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGFSWNKERKCIEAEKSVSNDWVKGHLNA 204

Query: 124 RGLRNKPFPYFDDLAIVFGKDRANGEGASTPNEMATDL-----DDDVNTDVEDCYVPSPP 183
           R L NKPFPYF DL IVFG+DRA G    TP EM +       +DD+  ++ED  +P+P 
Sbjct: 205 RYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEMGSQTARDTEEDDMIINLEDFDIPNPH 264

Query: 184 IVKPVVGEEFYITRSSRIDTPGSSRGSKRRRTVPTDAVDTFR 221
            ++P  GE+   T +S     GSSR SK+RR+   D +DTFR
Sbjct: 265 GLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSYSRDLMDTFR 306

BLAST of Spg025477 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-14
Identity = 64/287 (22.30%), Postives = 116/287 (40.42%), Query Frame = 0

Query: 17  WTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKL-PGCDIQVTPNLESR 76
           W P  D   +  +L   + G      G FR     ++  L   K     D+ V   L++R
Sbjct: 186 WHPPMDRYFIDLMLDQARRG--NQIEGVFRKQAWTEMVNLFNAKFESNFDVDV---LKNR 245

Query: 77  VRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAARGLRNKPFPYFD 136
            + L+RQ+ A+  ++     GF W++ER+ + A+ +V+ D+++ H  AR    +P PY+ 
Sbjct: 246 YKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYK 305

Query: 137 DLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVKPVVGEEFYITRSSR 196
           DL ++ G                     D   +  +C+V           +EF  + ++ 
Sbjct: 306 DLCVLCG---------------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTD 365

Query: 197 IDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQHKDEIESARRKQLYGEL 256
           +        S      P +  D      +  +T    I       DE ++   +     +
Sbjct: 366 LSISAEEEDSNSLLFDPKNKRD------QLANTDTSPINPKKPRVDETQTMSIEDTVEAI 425

Query: 257 QSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQ 303
           Q++P MD D+ +L A  LL D  K ++FL    + + K  +R L  Q
Sbjct: 426 QALPDMD-DELILDACDLLEDKLKAKTFLALDVKLRKKWLLRKLRPQ 437

BLAST of Spg025477 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-14
Identity = 64/287 (22.30%), Postives = 116/287 (40.42%), Query Frame = 0

Query: 17  WTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKEKL-PGCDIQVTPNLESR 76
           W P  D   +  +L   + G      G FR     ++  L   K     D+ V   L++R
Sbjct: 186 WHPPMDRYFIDLMLDQARRG--NQIEGVFRKQAWTEMVNLFNAKFESNFDVDV---LKNR 245

Query: 77  VRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAARGLRNKPFPYFD 136
            + L+RQ+ A+  ++     GF W++ER+ + A+ +V+ D+++ H  AR    +P PY+ 
Sbjct: 246 YKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYK 305

Query: 137 DLAIVFGKDRANGEGASTPNEMATDLDDDVNTDVEDCYVPSPPIVKPVVGEEFYITRSSR 196
           DL ++ G                     D   +  +C+V           +EF  + ++ 
Sbjct: 306 DLCVLCG---------------------DSGIEENECFVAMDWFDPETEFQEFKSSGTTD 365

Query: 197 IDTPGSSRGSKRRRTVPTDAVDTFRTKMRYVSTQIEKIALWPQHKDEIESARRKQLYGEL 256
           +        S      P +  D      +  +T    I       DE ++   +     +
Sbjct: 366 LSISAEEEDSNSLLFDPKNKRD------QLANTDTSPINPKKPRVDETQTMSIEDTVEAI 425

Query: 257 QSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWKYKCCMRILGRQ 303
           Q++P MD D+ +L A  LL D  K ++FL    + + K  +R L  Q
Sbjct: 426 QALPDMD-DELILDACDLLEDKLKAKTFLALDVKLRKKWLLRKLRPQ 437

BLAST of Spg025477 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-14
Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = 0

Query: 17  WTPMEDEVLVQCLLHLVQAGGWRADNGTFRSGYLQQVQKLMKE-KLPGCDIQVTPNLESR 76
           W+P E ++LVQ L+  +    WR  NGT     L    K M E     C  +   +  SR
Sbjct: 17  WSPEETKLLVQLLVEGIN-NNWRDSNGTISK--LTVETKFMPEINKEFCRSKNYNHYLSR 76

Query: 77  VRILKRQYGALVEMMGPTCSGFGWNDERKCIEAEKSVFDDWVRGHPAARGLRNKPFPYFD 136
           ++ LK QY + +++     SGFGW+   K   A   V+ D+++ HP  + LR   F +FD
Sbjct: 77  MKYLKIQYQSCLDLQ-RFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFD 136

Query: 137 DLAIVFGKDRANGEGA 152
           +L I+FG+  A G+ A
Sbjct: 137 ELQIIFGEGVATGKNA 148

BLAST of Spg025477 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-06
Identity = 30/105 (28.57%), Postives = 51/105 (48.57%), Query Frame = 0

Query: 77  RILKRQYGALVEMMGPTCS-----GFGWNDERKCIEAEKSVFDDWVRGHPAARGLRNKPF 136
           R+L+ +Y  L++      +     GF W++ R  I A+ +V+D +++ HP AR  R K  
Sbjct: 221 RVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 280

Query: 137 PYFDDLAIVF------GKD-RANGEGASTPNEMATDLDDDVNTDV 170
           P ++DL  +F      G D R +G  A T    A+   +   T +
Sbjct: 281 PSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRI 325

BLAST of Spg025477 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-06
Identity = 30/105 (28.57%), Postives = 51/105 (48.57%), Query Frame = 0

Query: 77  RILKRQYGALVEMMGPTCS-----GFGWNDERKCIEAEKSVFDDWVRGHPAARGLRNKPF 136
           R+L+ +Y  L++      +     GF W++ R  I A+ +V+D +++ HP AR  R K  
Sbjct: 221 RVLRHRYNKLLKYYKDMEAILKEDGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 280

Query: 137 PYFDDLAIVF------GKD-RANGEGASTPNEMATDLDDDVNTDV 170
           P ++DL  +F      G D R +G  A T    A+   +   T +
Sbjct: 281 PSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRI 325

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0050106.13.9e-8254.52retrotransposon protein [Cucumis melo var. makuwa][more]
TYK07921.15.0e-7751.72hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa][more]
TYJ96933.15.0e-6956.96retrotransposon protein [Cucumis melo var. makuwa][more]
XP_008455678.15.0e-6956.96PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
TYK26842.12.2e-6458.11uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U7F71.9e-8254.52Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C7T42.4e-7751.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BC952.4e-6956.96Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C2522.4e-6956.96uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 P... [more]
A0A5D3DTL01.0e-6458.11Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
Match NameE-valueIdentityDescription
AT4G02210.11.7e-1422.30unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.21.7e-1422.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G27260.11.7e-1433.82unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.11.7e-0628.57unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.21.7e-0628.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 17..114
e-value: 2.5E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 8..297
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 8..297

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg025477.1Spg025477.1mRNA