Spg025474 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg025474
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionACT domain-containing protein ACR8-like
Locationscaffold13: 32453651 .. 32457976 (+)
RNA-Seq ExpressionSpg025474
SyntenySpg025474
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGGCGCGGCGGAGGGCGAGGCACAGCGGGACAGCGAAGCGCGGCGGAGAGCGAGGCACTGTGGGACGACGAGGAGCGGCGGAGAGCGGGGCGAGGAGCGGTGGAGGGCAATTCGTGAGGGAGAAACACAGAAAGTTGGAGGGATGGGGACTGTCGAGTGAGATGAACGAAAATGGGGATTTAGGGCTTTTTTATCAACATCTCTACTGACGCTGTCCTTAACGGCGTCGGCAGAAGTGCGTTTCTCTCGACGCTGTATACATGGCGTCGAGAGAAACACCTTTTCTCTCGACGCCGTGTATACGACGTCGAGAGAGAGTCTTCCATGCCTTTCATTGGGAGACTTTCTCTCGACGCCGTATACAAGACATCGAGAGAGACTGTGTTAAGGTGTTTCTCTCGACGCCTTGTATATGGCATCGAGAGAAACACAGTCTCTCTCGACACCGTATACACGACGTCGAGAGAGAGTCTCCCAAGCCTCTCGTTGGGAGACTTTCTACGGCGTCGAGAGAGAGTCACCCAATCCACTTTCTCCCGACGTCGTTTTCTTAACGTCGGGAGAAATGTCTTCTCTCGACGCGTTTTGCATGCTTCGAGAGAAAGTTCGTTAGCAGAACTAGATTTTCTTGTAGTGTGTCAAACCCATGAGTTATGATGCCCGAGGTCCTTGCTAGAAGACTAAATTCTAACCTTAGTTAGACATCAAACGCATTTGTGTTTGAAGAGATTTCACCCTATTTTCACCTTGTATAAGGAGAGTAGAGTTTCGTGAGAACTCTAGAGGGATTGGATAAAGAGAAAAAACCCTAATTTTAGCTACTGCACATTATTTTCCAGCATCTTTTTCTTTTCATTAATTCTTGTACTTATCATTTATTTATTCAATGAAAAGTTATTTGTTTACACTTTTATCCATCGTGCGTAGCTAAATTCCATTGAGAGGTTCAGTTTAATGAATTCCCTTGTGGATGGAATAACTTGAAAGTTGTTTGTTTGCCTAAGCTTTATTTATGCATGTCTTCCTTTATTGATTATCATTCTAATCTTGTTAAGTTTAACTTGATCACTTAGACTTAGCACGCAATGTGAGTTTGGTACCGAAATGGTCAAACAATATCGGTTCTCATAAAGGTGATATAGGAGAAAGGGTTCGAAAGATAGTGTATTCGCTGTTATAAGGGGTGATCGCTTATAACAACTATACAGTTATAGGTTGCATGCATGAATCATCTATGTCGGAGTCGAGTCACAAATATGTGCATAACGGTACTCGCTAAGTCTTCTAACAGTTCTTGGGAGCAAGGCCAAATAGGAGTTAAACCTGACCCAATACATATCTAGACTTAGGTTAAACAAGCTATTATTAGAGTTATTTGCCCTTGGGTTGAAGCTTTACTAAATTCCTCGCTATTATTATTGTTTGTTATTCTTTTTACTACTTGCTTTATTATTTTCCAAAACCCCAACATCAATTATTTTATCTTGGTTACCTACCTTACAATTTAAGAGCAGTTTCTTCTTCAAATCTGTGTTTAGTTAGTCGCTTGTGGGATCAATACTTTTGGAATACTTCAAGAGTTTTTATTACTACATGTGATAGTGTATACTTGAACTTAGCTTGACTTAATCCATCTTTAATTCTTATTTTTCATCTTATTCCTACCTCCATCTTCAGTCGACATCTGCATCAGGTACCTAGCTTTATCCTTATACTATAGACCCTTTAGGTTGTTTCTTGAACATCGATCCTCGTATGTCCCCACATACTGTTCAAGCTATATAATACAACTTAAGATGTTAGTTTATTGGATTTAGAGTTATTTAATGCAAATTTTTTTTTTAAAAGTATTTAATGCAAATCTAATACAACACATTCAACAATAATATATTGAATAACCTCAATAACATTTTATTGATAATATCAAAATGTTTATATTTACTATCTACGAGTTTTAGGACATAAAACCCAACAGGGAGATCCCTACATACCAATATGCAGCCAAGTTTTTTCCTTTCAAGAACACAACCCCATTTTCAAAACTAAAAGAGACACTGTTTCTTTTAGAAATGTTGTTAATGGCAATTTTGTCTAAGAGCCTTCTGTCAATCCACTTGCAGAGTTTTTTAAAACCTTTTTTCCCTTGCGATTCTTTGTTTCACTCGGCCCCAAATTGTCCTCATTTGGGTTTCTTTGATTTTTCTTGGTGTGTATTTAAGGAGTGTTTGGAAGTTGGAACGCGGTGTCGATTTGGGTTCTTGAAAATGATGATGGAGATGGAATGACCTTCTTGTCTTGATGAATACGAAAAACCTTGTTATAAGGATGACCACTCCCAAGTTTGTGTGATCGATTCTTTTTTCTTTTATTCGATTTATAAGCAAATCCACTATCTCTTTGATGTTTTCCCCTGCTTTTGATGAATTTCTTTGTTGATTCTTGAAATTTCTGAAGATTTTGGGGTTTTGCTTGTTTTCCTCTATTCAAGGTTGTGATTGACAATGGCACTTGCTCTACGGCCACTTTGGTGAAGGTAAAGAAATCTCCATTAAAACGTTCTCTCTTATTCTGAAACTGTGTTTAATTCTGTGGCTGAAACTTCCTTTTTGGTGGGTGTGTTTTTGTGTTGAAGGTTAATAGTGTTAGAAGATGTGGAAATCTCTTGAAGGTCGTACAGGTTTTCACTGATTTGAAAAAAGGGTTGGGTGTTTTGGAAATCCCTCTTTGGATTTGAAACGGGGGAGGGAAGGGAGAAGAATATCAATACTTACCAAAAGCAGAATTAATCTTATTTAGTTTTTTAAACTCATTTTACTTCAAATATATTTTACTAAAATTATTACACGTGCAACACACGTGGTAAAAACCTAGTGCAAATGAATGAGAAGAAGATCAAGACTTACCAAAAGCAGAAAGCAAAGCTTGAGAAAGAAGATGAACACAGTGATTAAGTGGTTCGACAAGGAACTTGCATCCACGGTACAAGAGCAGTCATGGGATCTTTTAGTAACCTTCTTCAAGAATGGAAAAATACAAGGTACATGATACTTTTTCTTCCTCTTTCTACACTCATTCTTGTTCTTGAAACAAAAACAATAATGATATTCATCCACTTCAACTTAGAGCAATTATTTTCATAGAAACAGAAAGCTAGCAAACTTTCTTCTGTTTTTCTGTTGAGGTCAATAATTGCATGGAGTAAATCTTCCCCAACCTTAACTAATCAACAAACTAATTTCAATTCATCCTTTTAACATCCCTCTCCTTAAATTCTTCTGGTCTTTCCTTTCTTCTCATTTCTCCCCTTCTTCCCCATATATTTTTAAAAAAAAATGAAGGAGATTTTTCCTTGTTCCAAATTTGAAACAAACGGGAAATTCCCTTTGTTTTTTTTTTTTTTTTTTTTTCAAGTATGGGTAATGGGAGAAAGAAGGAGACAAATAGGGAAAGAGAAGAAGAAAGAAATGACAAGGAAGAAGAAAAAGAGAAAGAAGGAAAAAAAATAAGAAAAAAAAACTACGAGCGATGACGACAAGCAATAGACGACACTGGTCAGCGATGGCGCCTATAGTGGAAGAAGAAGAAAAAAAAGAAGGGAAAATATATAACTATTATATTTTAATTTATTTTTATTATTGGTGATGAAGGTGGATTGTGGTGGATCATGAAGGTGGGGGGTTAAAAAAATAAAAGAAGAAAAAAAAATTTAAATTTAATTTTTTAATATTAATAAATAATTTAAAAAATCAATTGGACATATCCATATGTATGACATTGTTCACACATCATTTCAAAGAAATAGAACACGGTAGAAATAACTTGTATTTGTATTGATTTTGTTGGGTGCAATACAATCTCTAACATATATATGATCCTCTGTTTCTCTCTCTTGCCTGTGTGTTTCACTCGAGACCTGAAATGCTTATTTTTTAGTTTGAATCTTCAATTGATCCTTGGGGTCTTGAAGTTTTCAAGTCTTGAAAGGTCGTTTAGCACTCAAGAACTTAAGTCGCCAGTCTTCTACCTACTCTTTAGAGTTTCTCTAGATTCTCTTGTCTTGGTTGAGAGTTTACTTTTCTATTTATAGAGTTTTCATGGATAGGTAAACTTGTGCTTTGATGACTTTAGGCTCAATCATTTGGACTTGGGCTTCGTTGGCTTTGGGCTTAACTATTTGATAGCACACATAGCGAGCTATTTTTCTCGGTTTATTTTAGTTAGTCTTTGAGTATTATTTGACCGAATTATGCACTTTGATGTTTATTTTGTAGGAAATTGAGTTTTGAAGATAAAATAGAGAAATTGGAGTTGATCGGGTGCT

mRNA sequence

ATGCGAGGCGCGGCGGAGGGCGAGGCACAGCGGGACAGCGAAGCGCGGCGGAGAGCGAGGCACTGTGGGACGACGAGGAGCGGCGGAGAGCGGGGCGAGGAGCGGTGGAGGGCAATTCGTGAGGGAGAAACACAGAAAGTTGGAGGGATGGGGACTGTCGATCGACATCTGCATCAGGTTGTGATTGACAATGGCACTTGCTCTACGGCCACTTTGGTGAAGGTTAATAGTGTTAGAAGATGTGGAAATCTCTTGAAGGTCGTACAGGTTTTCACTGATTTGAAAAAAGGGTTGGGTGTTTTGGAAATCCCTCTTTGGATTTGA

Coding sequence (CDS)

ATGCGAGGCGCGGCGGAGGGCGAGGCACAGCGGGACAGCGAAGCGCGGCGGAGAGCGAGGCACTGTGGGACGACGAGGAGCGGCGGAGAGCGGGGCGAGGAGCGGTGGAGGGCAATTCGTGAGGGAGAAACACAGAAAGTTGGAGGGATGGGGACTGTCGATCGACATCTGCATCAGGTTGTGATTGACAATGGCACTTGCTCTACGGCCACTTTGGTGAAGGTTAATAGTGTTAGAAGATGTGGAAATCTCTTGAAGGTCGTACAGGTTTTCACTGATTTGAAAAAAGGGTTGGGTGTTTTGGAAATCCCTCTTTGGATTTGA

Protein sequence

MRGAAEGEAQRDSEARRRARHCGTTRSGGERGEERWRAIREGETQKVGGMGTVDRHLHQVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDLKKGLGVLEIPLWI
Homology
[Close]
BLAST of Spg025474 vs. NCBI nr
Match: XP_016900581.1 (PREDICTED: ACT domain-containing protein ACR8-like [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 3.0e-05
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNGTCSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGTCSTATLVKVDSARRFGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. NCBI nr
Match: TYK19465.1 (ACT domain-containing protein ACR8-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 3.0e-05
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNGTCSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 33 RVVIDNGTCSTATLVKVDSARRFGNLLEAVQVLTDL 68

[Close]
BLAST of Spg025474 vs. NCBI nr
Match: XP_022152724.1 (ACT domain-containing protein ACR8-like [Momordica charantia])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGACSTATLVKVDSARRYGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. NCBI nr
Match: XP_004147955.2 (ACT domain-containing protein ACR8 [Cucumis sativus] >KGN55928.1 hypothetical protein Csa_009736 [Cucumis sativus])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. NCBI nr
Match: XP_038876807.1 (ACT domain-containing protein ACR8-like [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-04
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGACSTATLVKVDSARRYGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. ExPASy Swiss-Prot
Match: Q9LNA5 (ACT domain-containing protein ACR8 OS=Arabidopsis thaliana OX=3702 GN=ACR8 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.4e-05
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CS+AT+VKV+S RR G LL+ VQ+ TDL
Sbjct: 21 RVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDL 56

[Close]
BLAST of Spg025474 vs. ExPASy TrEMBL
Match: A0A5D3D7F1 (ACT domain-containing protein ACR8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001190 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNGTCSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 33 RVVIDNGTCSTATLVKVDSARRFGNLLEAVQVLTDL 68

[Close]
BLAST of Spg025474 vs. ExPASy TrEMBL
Match: A0A1S4DX74 (ACT domain-containing protein ACR8-like OS=Cucumis melo OX=3656 GN=LOC103490944 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNGTCSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGTCSTATLVKVDSARRFGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. ExPASy TrEMBL
Match: A0A0A0L2H3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036540 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.6e-05
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGACSTATLVKVDSARRFGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. ExPASy TrEMBL
Match: A0A6J1DGW3 (ACT domain-containing protein ACR8-like OS=Momordica charantia OX=3673 GN=LOC111020379 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.6e-05
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CSTATLVKV+S RR GNLL+ VQV TDL
Sbjct: 25 RVVIDNGACSTATLVKVDSARRYGNLLEAVQVLTDL 60

[Close]
BLAST of Spg025474 vs. ExPASy TrEMBL
Match: A0A6J1KUW1 (ACT domain-containing protein ACR8-like OS=Cucurbita maxima OX=3661 GN=LOC111498405 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.3e-05
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CSTATLVKV+S RR GNLL+ VQ+ TDL
Sbjct: 25 RVVIDNGACSTATLVKVDSARRYGNLLEAVQILTDL 60

[Close]
BLAST of Spg025474 vs. TAIR 10
Match: AT1G12420.1 (ACT domain repeat 8 )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDNG CS+AT+VKV+S RR G LL+ VQ+ TDL
Sbjct: 21 RVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDL 56

[Close]
BLAST of Spg025474 vs. TAIR 10
Match: AT4G22780.1 (ACT domain repeat 7 )

HSP 1 Score: 42.7 bits (99), Expect = 2.1e-04
Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 53 VDRHLHQVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          V  ++ +VVIDNG C  +T+VK++S R  G LL+ VQ+ TD+
Sbjct: 15 VRMNMPRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDM 56

[Close]
BLAST of Spg025474 vs. TAIR 10
Match: AT1G69040.1 (ACT domain repeat 4 )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDN +C  AT+++V+S    G LL+VVQ+ TDL
Sbjct: 22 RVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDL 57

[Close]
BLAST of Spg025474 vs. TAIR 10
Match: AT1G69040.2 (ACT domain repeat 4 )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0 

Query: 59 QVVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          +VVIDN +C  AT+++V+S    G LL+VVQ+ TDL
Sbjct: 26 RVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDL 61

[Close]
BLAST of Spg025474 vs. TAIR 10
Match: AT1G76990.1 (ACT domain repeat 3 )

HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0 

Query: 60 VVIDNGTCSTATLVKVNSVRRCGNLLKVVQVFTDL 95
          V IDN +C   TLVKV+S+ + G LL+VVQV TDL
Sbjct: 25 VSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDL 59

The following BLAST results are available for this feature:
BLAST of Spg025474 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016900581.13.0e-0580.56PREDICTED: ACT domain-containing protein ACR8-like [Cucumis melo][more]
TYK19465.13.0e-0580.56ACT domain-containing protein ACR8-like [Cucumis melo var. makuwa][more]
XP_022152724.11.2e-0477.78ACT domain-containing protein ACR8-like [Momordica charantia][more]
XP_004147955.21.2e-0477.78ACT domain-containing protein ACR8 [Cucumis sativus] >KGN55928.1 hypothetical pr... [more]
XP_038876807.11.2e-0477.78ACT domain-containing protein ACR8-like [Benincasa hispida][more]
BLAST of Spg025474 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LNA52.4e-0566.67ACT domain-containing protein ACR8 OS=Arabidopsis thaliana OX=3702 GN=ACR8 PE=2 ... [more]
BLAST of Spg025474 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D7F11.5e-0580.56ACT domain-containing protein ACR8-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S4DX741.5e-0580.56ACT domain-containing protein ACR8-like OS=Cucumis melo OX=3656 GN=LOC103490944 ... [more]
A0A0A0L2H35.6e-0577.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036540 PE=4 SV=1[more]
A0A6J1DGW35.6e-0577.78ACT domain-containing protein ACR8-like OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A6J1KUW17.3e-0575.00ACT domain-containing protein ACR8-like OS=Cucurbita maxima OX=3661 GN=LOC111498... [more]
BLAST of Spg025474 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G12420.11.7e-0666.67ACT domain repeat 8 [more]
AT4G22780.12.1e-0447.62ACT domain repeat 7 [more]
AT1G69040.13.6e-0452.78ACT domain repeat 4 [more]
AT1G69040.23.6e-0452.78ACT domain repeat 4 [more]
AT1G76990.16.1e-0460.00ACT domain repeat 3 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg025474.1Spg025474.1mRNA