Spg025410 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACAAAAAGGTTTGTGCGCAAGATGTCCCTTTGAGATTTAATCCGAGCAGCAAAAATATTCTCACATAAGGAATCCACGGAGAACGGCATAGGGAGATAGAGGCCGATACCTTGAAATTGGATTCCAATTTAAACAAAATTTTTCAAAATGTGTTTGATAATATATTTACAAATCATAAAAAATAGTTCTAGTTATTACCAAAACTAAATATTATGTTGAATTATTTCAACCAGTATTATTATTATATTTTTTTTTTTTTTAAGAAAAGAGGATACTTTATTAATGATGTATGTGAGCAACATACAATCTAAAAAAAGTTCTCCAAGTTTAGAGCAATATCGGAAGCCTTGTAGTTCAAGAAAGCTTTAGAAGAAGATCAAGACCGTTAATTAATTTTTGAACACATGTTTTATGTTATACAACTTATTATTTTATAATATCATATAGTTTATAATATATTATATAATACAAATTTTAAAATGAGTTTATAACATAAAATACTATATTTAACCAAAAAAAGTATCTTCTTTAATATAATTCTCCATTTTAAAATTTCAAATTCAAAATCTGGATATAATAAAAACATACAAATATTGAAATTTTCATTATTTGGATCACAAAATCTGAAAACAATTCTAAAAAACAAATAATATCAAATGCATATCGATTGAAATCAACAAATCTGAAAACATAAAACATAATGGTCAAGTTTCCGCATGTAAAAGATCTTCTGATACTTATGTAACAGTTGATAAAGAACTAAGTGTGTAGAATTACTCACTACTCCGGACATATTTGTTACTTGTTGTGGCTATTTCCAATGGAATTCTTGTTTGAATTATAACCCAAATTTTCTTGAATCCCACGATTACAGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCGGAGCTCCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAGGACTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGTATGTGTTCTTCTGACTTAGACTTCGTTACTTTATATCAAATTATCAATGATTCAGACATAATATGTTTTACAATGGTTGTAGTGAAGGCTTGGGTACTTCAACTCTCTCTCTCTCTCTCTGTCCTGTAATTGTCTTTGAGTGGTTCTTAATCAAAAATTTTTCTTCAACGCTTTCTTATTTCATGTGTTCTTAGGAAACCGTTTTGCCTTGCCATTCTGTTATCAGATTCAAAGTGAATCCACATTGAGTAGATTTGTTTCTTAAAACTGTTTTAGATCATGTTATCCAAACAGTTAAATTTTTTTGAAAACATACTTTTTATGTTTTCTTTAACTTTTACATTTGAATATGGAGTTGCACTAAAAAAAAAGATAAGAACTTTGATAAATATACGGTTTCATGTTATATACTCATTTTATTTTTGCTTAAAATTAAAACATGTATGACACTATGCATCATACTTTATATAATATTGTAAAATGGTAATTATACAAAATTTATAATTTAAAATATGTTAATAAATTAATTAATAATAGTTGATATTCAACTAAATATTTGGTTAGTATCCACTAATATTTTCATTGTTTGTGAATGTATTACCGAAGACACTTTTGAACGATTTTTTAAAAATGAGATCCGATTTCTAATTCTACAACCAAACACATCTGTAAGTACTGAAAAGTGATAACATGGAACCCAATTCTGCTTATCATTGAATTCCTTGTTTTCAAATCTCATTGCTTGGCAAAAGCACCCATATCTTTTTCGGATATTGGTGATAGGTAGAGTGCAAATACATGCTTTTATATGTTTTATACTAGGAAGTACAAACCCTCATTTCCTTTATATGTTTTAAATATGGGAGTTTTTGTGGTATGTTTTATCTTGGTTATTGTTCTGGATTAAATTTGTATAGCCAATCTCTTTCTCATAATGTTTTGTTACAAATTGTTTACTTGTTATTTTCTCATATCATATGTTTTATACGAGGAAGCACAAACACTTTTGTTTGGGTATTGTGTTTGCTCAATATGTGTTTGACACTCTTGAATATATTGGACACGTGTTGGGTACTTCTCTAACATATAAGACACATGAACGCTGGTTGAACACATTAGATGGACATATATTGGGACAATGATTGAGCACTTCATTTCAAGTGTTAAGCTATGCATTTAATATTGTTTGAAGACTAATCAACCATAAAAATAAATATGGGAGAAGAATAACAAATTTTGATTGTGGAAAGTGCAATACTTTCTTTAAAGCATTTAAGCATGTAAAAGATGGCCGATTTTAATTTCTTTTTCCCATTCAATGTTAGAGTCATTTGGGAACATGTTTAGTTGGTTCTCGATTCTTTTGCTATAAGGTATTGCATCGTTAAATATACGATGTCATAATAAATTAACTTCCTGAAGCATTGTTTCATCACTTTCTTTTTTTGTTAAAAAAATTCTTCACTTCTTTTATATTATCTTCTAAATGAAAATATAATGAACTAAAGCATATTTTTAATGTGAAAACATTATAATGTATGAGATGTTCAAATATATTTTATACATTGTAAATTTAGTGAGCATGCCTTTGCCAATGTCGTGTCCTGATTTTATAGAAAATGATGTGCACAGTGTCTATGGCATGGTGTGGCTTCATAGGTTTTATCTCCCTAATATAGATGAAGGGCTTTCCAAAGGAGCTGTTCTCTTTATGCCTTTTTCAAATTTACAGTATACTTTGGGTTTCTGATTCTATTTCAATGTTTCTGGATTTTTTTAAGCGTAATGTTTCTCGATATTATATTTCACATGTTGACATAAAGTTTAGTTCCGGAGAAACATAAATTATCCCCTGTGAGATTTAATGTTCTACTTGGGTGTCGGGAATTTTTGTAATTATCTGCTAGGCCCTATCATCTTCGATTGAATCACTATTGTATGATTAGTTTGTTTGTCCTTTTGTATTCTTTCATTTGAATGAAAGTTTAGTTTTAACGAACTATGAGTTTGGTTATTTGAGTGAATGAAAAAATAAAGGACTTTGAACTCTGAAGAAATGAGTTCAAATCATAATGGCTACGTACCCAAGATTCAAAATTCTACGAGTTTTCTTGACAACTAAATGTATTAGAGTATGTGTCGTTTCATTAGATTGGACACTCTCATATATAAATGAAAAAAGGAAAGCTTGGTTTTCCATCTCTATATATTTTATTGCTGGGTGTGGAATGAAAAGTTGTTTATTTTCTGTTTGAACTAAGATATGAAGAGTTTAACAATGTGGATTTTGGTGCACCACCAATTTTAGGCATCTGCTATCCTGTCTGCTTAGATTTTTATGTTTGATTGGACTATTGGTCAACTTAGAGGAGTGCAACAGCGACTCAATTTAATATATTAACACCAATAGTTATAGTATCCTCCTTTTATTTCTATTTTTAGGACTAGGTACAATAGCCTCTCTCTCTTAAATGCATAAACGGGACTTGGGCTTTGAGGATTATTAATTTACTTCAGGCTTCATTACTATAAGGGAAAGCCCATGTATTGCATTCTTTGTTTTGTTCCAGATTGGATACTGAATGTAGGATAATGAGGATAAAGATGTGTTTCTTCATACACCAGGGTCCATTATGAGTCTTTTTAGTTTTAGTTCGACTCCTTCTTTGGCTGTATTTTTGTAGGCTCGTTTTCTTTTGGTTTGGGTTTCTGGTCTCGTTTTGAATTTCTTGTATTCTTTCATTTTTATCTCAATGAAAGTTTGGTTTCTTGATGAAGAATCCATGACTGAGTTCATGTTTCTGTTGCTTTTGTTGCAGGAAGCGTCTATTTAATATGATAAATGATCTTCCGACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGGTTTGAAAGAATTTTTTTATCCTGCTTTCTCCCTTCCTTTAGTTTTTTAGCCTCTTGGGCTTAAAATGGTTATAGACACAAAACCACTGGTGATTTTTAATTGCTTTATATGGTTTGGCTGAGGATTAGCCTGTAGAAACCTGTCGACCTGCGTATTATACTAGAGTATTATTTGGTTACTTGTTCTTTTTTGCTTAATATGTGATTCCATCCATGTTGGAGGCACCTTACTAAGCAATATTATTTGGCATATGTTTGCAATATACAGCGAAGTTCTGAACCTCAAATAAAAAATACGAAGGCAGTTCAATCGAAGGACGAGGATGAGGAAGGTTTGGAAGAGGAAGACGAGGAAGAACACGGAGAAACACTTTGCGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGATATTTGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGAGCAGAGCATATCAAGCAGTATAAATGTCCATCTTGCAGCAACAAGAGAATCCGACCCTGATGTTGTTTACACAGAGCACCTGGTATTTTATTAGCAACAACTTCCCCTCCCTCCCCAAACCAAAGGAAAAAGGGACAAAAAGGAAAAAAAAACTAAGAGATGTCAAAGGTTGTTCTCCTTAGGATCTCAGCGTAGACGGCTAATTGTGTATTAGGATTAGTCTAAACTTTAAATTAGGACTGTGGTTAGGTTGGAAATTTACATTCTATGTTATCTGTGGACAGACTCTTTTCTGTTTGTGTATTGTATGAACATGTATTTTGTATGTGGTATAACGTGTTCTTG ATGGCGACAAAAAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCGGAGCTCCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAGGACTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCGACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGAAGTTCTGAACCTCAAATAAAAAATACGAAGGCAGTTCAATCGAAGGACGAGGATGAGGAAGGTTTGGAAGAGGAAGACGAGGAAGAACACGGAGAAACACTTTGCGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGATATTTGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGAGCAGAGCATATCAAGCAGTATAAATGTCCATCTTGCAGCAACAAGAGAATCCGACCCTGA ATGGCGACAAAAAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCGGAGCTCCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAGGACTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCGACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGAAGTTCTGAACCTCAAATAAAAAATACGAAGGCAGTTCAATCGAAGGACGAGGATGAGGAAGGTTTGGAAGAGGAAGACGAGGAAGAACACGGAGAAACACTTTGCGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGATATTTGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGAGCAGAGCATATCAAGCAGTATAAATGTCCATCTTGCAGCAACAAGAGAATCCGACCCTGA MATKSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKNTKAVQSKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRIRP Homology
BLAST of Spg025410 vs. NCBI nr
Match: XP_022997242.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-109 Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Spg025410 vs. NCBI nr
Match: XP_023002572.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 403.7 bits (1036), Expect = 9.6e-109 Identity = 197/199 (98.99%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Spg025410 vs. NCBI nr
Match: XP_022131809.1 (PHD finger protein ALFIN-LIKE 4-like [Momordica charantia]) HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108 Identity = 196/199 (98.49%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Spg025410 vs. NCBI nr
Match: XP_022951575.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita moschata] >KAG7020671.1 PHD finger protein ALFIN-LIKE 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Spg025410 vs. NCBI nr
Match: XP_022962095.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita moschata] >XP_023546198.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG7029537.1 PHD finger protein ALFIN-LIKE 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-108 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2) HSP 1 Score: 331.3 bits (848), Expect = 7.9e-90 Identity = 162/200 (81.00%), Postives = 177/200 (88.50%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 3.2e-83 Identity = 148/206 (71.84%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 4.7e-82 Identity = 151/199 (75.88%), Postives = 175/199 (87.94%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy Swiss-Prot
Match: B8BJV8 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35671 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.6e-80 Identity = 146/199 (73.37%), Postives = 163/199 (81.91%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy Swiss-Prot
Match: Q2R837 (PHD finger protein ALFIN-LIKE 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0244800 PE=2 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.6e-80 Identity = 146/199 (73.37%), Postives = 163/199 (81.91%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy TrEMBL
Match: A0A6J1K4G7 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492205 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109 Identity = 198/199 (99.50%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy TrEMBL
Match: A0A6J1KJW0 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496393 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 4.6e-109 Identity = 197/199 (98.99%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy TrEMBL
Match: A0A6J1BRB4 (PHD finger protein ALFIN-LIKE 4-like OS=Momordica charantia OX=3673 GN=LOC111004878 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.1e-109 Identity = 196/199 (98.49%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy TrEMBL
Match: A0A6J1GJ74 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454350 PE=3 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.1e-109 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Spg025410 vs. ExPASy TrEMBL
Match: A0A6J1HE48 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462656 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 7.9e-109 Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Spg025410 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 ) HSP 1 Score: 331.3 bits (848), Expect = 5.6e-91 Identity = 162/200 (81.00%), Postives = 177/200 (88.50%), Query Frame = 0
BLAST of Spg025410 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 ) HSP 1 Score: 309.3 bits (791), Expect = 2.3e-84 Identity = 148/206 (71.84%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Spg025410 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 ) HSP 1 Score: 305.4 bits (781), Expect = 3.3e-83 Identity = 151/199 (75.88%), Postives = 175/199 (87.94%), Query Frame = 0
BLAST of Spg025410 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 ) HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75 Identity = 144/203 (70.94%), Postives = 160/203 (78.82%), Query Frame = 0
BLAST of Spg025410 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 ) HSP 1 Score: 276.6 bits (706), Expect = 1.6e-74 Identity = 139/197 (70.56%), Postives = 157/197 (79.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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