Spg025402 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025402
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CCHC-type domain-containing protein
Location	scaffold13: 41984145 .. 41989069 (+)
RNA-Seq Expression	Spg025402
Synteny	Spg025402

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAAAACCAAAGCCAAAATCTTCCGTACGATACTTCCATTTTCGTTCTTCAGTTCGCGCCGTGGCCGTTGGTAGTGGTGGCGTTTTTGCCTTTTCAGTTCTTGCCATGTAATGCAACACATTCCTATCCGAACAGATTTTTGAGATGTCCTCGTCACTCTGTTCATCAATTCGGGCATTGGCGCCGCAGTACTGGCCACAGAAGAACTTGAGATTCTACATATTGCTTCAATCCAAGAGATGTATATGCTTCGCACCTCGCTTCCTTGCCTGTTTGAGCAGCAACGACGACTCTGTTGCAATCCCCAAACCCGCTCCGGTATTCACTCTTTCATACTTTGTTCAGAATTCGACCACTAATCGTCTTTTTCACTTCTTCTTGTTTTCATTTTGGGTCGCAGCTGGCTTTCGATCCTGCGGAGGAGTTGTACGGACTTGGCGTCGATTTAAAGCCAAGGTTTAGTATAATCTTCAGTTACTCTACTACTGGGCTTTAATTCTTGTGATTTGAAGTATATTTTATGCTGAATTTTTCTATGGTTTCTGTCAGTTCTACATTGACGAATTTTCTTGATTATTGGGCTTTAATTCTTTTGATTTGAAGAAGATTTTATGCCGAATTTTTATGTGGTTTGCTGCCACTTCGACATCGACGATTTAATTTGACACGGGACTTAGATTTGAAATCAAAGCTGAGAAATTAATTGTGCATTTCAGGAATTCAGCTTCTAGCTCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGCTCCCATGTCCAAGTTGCCGTGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAAAGGAAAGGTATATGCTCTAGTAGACTAATTGACCATGCATCCTCAATTCTAATTCCAATTATGTGGTTGATTTATAGTATATTTTGTCACATCCAAAAAGTACTTCCCACTTCCCACTTAAAATCATCACGTCAAAAGTAATTTATATTTAGATTTATAGGTGCTTCTAGAAAAAGTCATAAGCATTTTAAGGACTTGATGAGAAAAGTGCTTTTTTCCTAACTAATTGTTTGGGAAGTATTTAAAAACACCTTCAAGAACATAGAACAAAACATCGAACCAAACAAACCATTACTTTAACTTCTTCTACTCTCATGAAGAGTGTTGGAATTTAATATGTAAAATAAAGGTGCCCAAGGATACGGACCTGTTGAACTGAATTTAGAAGGCTTAGTGGTTGACCTCGACGGTAACAGCTAACAGATGGCTGTCAGATGATTTGTAGGACCTGAAATACTCGTCAAAACTGTTTCACCTAGTGTCAGCACATTCATCTCGATTTGGAATTAATCATACAGCATGCAAATGTTGGTTGTTCTGCCAGGTTCTATTTGTTTGTTTACCTTTACCTCATGCTGCCAGGGTATAGTGACCTGCCACCAGTGCTTGGGAGATCGTGTCATATGGGAAGAGTCCATTGATGAACAACCGTGGGAGAAAGCCCGCTCCACGTAACTAACATCTTCTCTTTCTTTTGTTCCTGTTGGTTTTCGTTTTTGTTGTAATTTTCATTGAATGCTAGCTTTTAGGCAGTAAAGGAGTTGGCTCAAAGAAAATTTATTTCTGGCGTTATTCTCTATTTTACTGGTAGAAATAATCATGGATGATAAATAATCATACCTCTTTTCAATTCCTAAAATCCAGAACCAAAAGACATGATTATTTAGATTTATTCCCTCAACTAGAGAATCTCTTTCCAATGAGGAGTGAGAATACTCTGCTCTAGATTCTTAGAATAGATCATAGAGTTTGGTTGAATTCAATAAGAAATCATAGGGAAAATGGAAAATATCTTTTTTGTTTTAAGAAGAGAAGAAGACAAAGAATATAGTTACATAAAACGTAGAAATATTTTGTGGACATTTGAAAAGGTGCGGGTGAGGCTTTTTAGACTAATCTTGATGTTGGTTTAGGGTTTTATGATCAATCTTGATGAGGGTTCAGGTTTTTGAAATCAATTTTGATGTAATGTAAATAATCAACTTTGTGCACTTTCAGTGAGGGGCACAACGCTATTGCCACATTTTCATTGTTTGCTCCCTTGCAACCGAACGTAGTGGGTTAGCAGCTGTCTCGTGACTTGTGAGAATACTCAAGGTGCACAGAAGTTGGTCGACTCACATAGATGTAAAAAAAAAAAAAAAAGCTCCCTTTCTGAGACTTTCTGGAGGCAAATGCTTTCCTCCAACTGGCATATGGTTCTCCCTCTTTATAAGGAAAAACCATTTTATATTTGATATTTTTTGGATCATTGTCCTTTTTGGCTCTCGCTTGGTGTAAAAGCTCCCCTCTATTTCATAGTTATAGTATGAACCCCCTTTTGCCTAAGTGGAGGCATTTTCTGTTATCTTCTGTGGCTTGAGGTGTGGTTTCCTCCCCACCCAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAAGAGAAAGAGAAGCATACCACTTTTGTGCTCCAAACGGTTAGGGACCTTCACAAATCAATGCAATGCCTCCTTTTCTCTTGGTTAGGCAATCAACTTCTTTTTGCCCGTCGATTAGGTAATCGATGACTCAGTGTCCTTCCTCTGGTCCTCCAAAGGAGCATGATCACCTTTAATTGCTACACACCCCTCTTCATCTTCTTTTAAATTCTTGTCCTTCTCCCCATATCGATATTAAGTTGTCCCTTTATTTTTTGTTAATCGTTCTTTTTTCTTCTGGCCATAGTAGATGATCCGGACCCCAATTTCTTTATGTTTTTGAAATTTGTTTCCATTTATAAATTTTATTTGTTTATAATTCAACAATCTAATTACTAATTTGTTTTTTCAATTTTCCAACTAATTTTTTTTAATGTCTTAATGTTTGTATGGAACCTTGAGTATTGTTTGGCACTTGGCTTTACTTTTTATCAACATTTTCATGTCCTGATTATTAGTATTTTATGTTCTGACATTCTATAATTGTATTCTATCATTATGTAAAACAAGGGTGGTTTTTCAACTTTACAACTCAAATGATAAGTAATATTCTACATACTAACATCAGTATCAAATTATCAATCAATTTTGTCCAATTGATCTTTAAACCTAAAGCAATTTCAAGGGCTCTAATTTTTTGAATAAATTCTCGATCATTATGTCTTATGTCACCATACCTGCAAAAGAGAAGCATTTCTTTTGTCTTGCGATCAGTTATCTCTTGATGACTTTGTTTCTCTTCTAAAAAATGGTTATCTCTTAAATGAAATTTCTTTTATTGGTTCCTTTCTTGTAGCAATATTGCCATGATAGTTTTTAATCGTAATCCAGACAGCTATAATAGTGAATGTGTAGTCATGCATTCTGACTTCGTAACAGTGACATATAGCCTATGAGTACCCTATTTCCCGGACCCAGTTCTGACTAATGTTTCTCTCAAGTTGTTTGTATTCAAGATTTATCAATTTTCCTTACTTTGCTATGCAATCTTGGTTCTATAATTCTAATTCCAGATAAATCTTAGAGGTTTTGGGTATTTAAGTTTTTTCATGTGTTTATATCATGTTAGTTCTCCATTAAGAATGAAGGAAGACGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTAAAGATCAGTCGATCATTAAAAGTTTGTTCTCTACCTTCCCTTACTGTGACCTGTTAACTATTTCATGCGTGCTGCATTATTGGAAAGATAACCTAAATGACCAAGGATGAACATATGCACACTGAGATCCGTCATATCATATATAGAACAAGCATGTAGTCTCTCGACTCTCCAGTTGATGTTGATGAATACGGTTATAGTCAATAAAGTAATTTTAAACTTGAGACTTAACAGAAGTATTGCTCTCAAAATATACTTGTTTGCTAGTTACCAATTCATGAATTTAATCTTTGTTGTTTAGTTGAATGATTGCAGAGTCTCAATGCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCCACTCTTCATGCTCAGAGAGTGGCTGCAATTAAGGTATGTTCTTGAGGTAATTTGTCTTCTAGCATTCTGTTTCTGAATATTGTAACAACCCCCACTGTTTTTAACCTACTAGTTAGGTTTACTTACTACAATGCAATGAGCTGAAGTGTAGTAACTTAATAAAATAAAATAACTGGGGTCTCATAAAACCAAATTAGTTCAGTCACTTTTATATTACTGAAGTTTAATGATATATTGATATTTAACTGTTTGAGAAATTAATGAGACAGAAACGTAAACAGAGTTATCTATTGTGACCCCACCTAAAAAAGCTTGAATTTAGACACTTCTATATTGCTAGAAACTTTGTGAATATTTAATCTTCAAGAAATCAATGGGACTGAAATGTAATGGAGTTCATACCACTACTCACATGATGCAATAACAAGCAAACCATGATCACATGTCAAATATCTTTGTTATCATTAGTTCCATCTTCCTTGAACATGTGAAATCTTTAAGTAAAGTCGTAAGGGGTTCCATACTTGAGGAGCTGATTGTATTTAACTGAATTGACGAGCCTATCATCTTATATATATTTTAATATCTAGGAGTGTTTGGCCCAATTTACATGCACCTTGACTAAACTTGTTGAGCAACCGTTGACCCTACTACATTTGACCAAGGAAACTTAGGGTGTGTTTGAAATGTTTTTATAACGTACTTTAGTCTGCTAATGATTATTAGCGAGTGGAAGACTTTGTTAAAGTAGTTGCCGGGCATGGGTTTTCTCCACCCATGGCCCTTAGGTTGTTCGCCCCTTTTGTGATTAATATATCTCTTTGA

mRNA sequence

ATGTCCTCGTCACTCTGTTCATCAATTCGGGCATTGGCGCCGCAGTACTGGCCACAGAAGAACTTGAGATTCTACATATTGCTTCAATCCAAGAGATGTATATGCTTCGCACCTCGCTTCCTTGCCTGTTTGAGCAGCAACGACGACTCTGTTGCAATCCCCAAACCCGCTCCGCTGGCTTTCGATCCTGCGGAGGAGTTGTACGGACTTGGCGTCGATTTAAAGCCAAGGAATTCAGCTTCTAGCTCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGCTCCCATGTCCAAGTTGCCGTGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAAAGGAAAGGGTATAGTGACCTGCCACCAGTGCTTGGGAGATCGTGTCATATGGGAAGAGTCCATTGATGAACAACCGTGGGAGAAAGCCCGCTCCACTTCTCCATTAAGAATGAAGGAAGACGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCCACTCTTCATGCTCAGAGAGTGGCTGCAATTAAGCGAGTGGAAGACTTTGTTAAAGTAGTTGCCGGGCATGGGTTTTCTCCACCCATGGCCCTTAGGTTGTTCGCCCCTTTTGTGATTAATATATCTCTTTGA

Coding sequence (CDS)

ATGTCCTCGTCACTCTGTTCATCAATTCGGGCATTGGCGCCGCAGTACTGGCCACAGAAGAACTTGAGATTCTACATATTGCTTCAATCCAAGAGATGTATATGCTTCGCACCTCGCTTCCTTGCCTGTTTGAGCAGCAACGACGACTCTGTTGCAATCCCCAAACCCGCTCCGCTGGCTTTCGATCCTGCGGAGGAGTTGTACGGACTTGGCGTCGATTTAAAGCCAAGGAATTCAGCTTCTAGCTCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAGCTCCCATGTCCAAGTTGCCGTGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAAAGGAAAGGGTATAGTGACCTGCCACCAGTGCTTGGGAGATCGTGTCATATGGGAAGAGTCCATTGATGAACAACCGTGGGAGAAAGCCCGCTCCACTTCTCCATTAAGAATGAAGGAAGACGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCAAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTAAAGATCAGTCGATCATTAAAAAGTCTCAATGCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCCACTCTTCATGCTCAGAGAGTGGCTGCAATTAAGCGAGTGGAAGACTTTGTTAAAGTAGTTGCCGGGCATGGGTTTTCTCCACCCATGGCCCTTAGGTTGTTCGCCCCTTTTGTGATTAATATATCTCTTTGA

Protein sequence

MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLAFDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVEDFVKVVAGHGFSPPMALRLFAPFVINISL

Homology

[Close]

BLAST of Spg025402 vs. NCBI nr
Match: XP_023002096.1 (uncharacterized protein LOC111496065 isoform X2 [Cucurbita maxima])

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. NCBI nr
Match: XP_022951581.1 (uncharacterized protein LOC111454354 isoform X2 [Cucurbita moschata])

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. NCBI nr
Match: KAG6585819.1 (DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. NCBI nr
Match: XP_022951579.1 (uncharacterized protein LOC111454354 isoform X1 [Cucurbita moschata] >XP_022951580.1 uncharacterized protein LOC111454354 isoform X1 [Cucurbita moschata])

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. NCBI nr
Match: XP_023002093.1 (uncharacterized protein LOC111496065 isoform X1 [Cucurbita maxima] >XP_023002095.1 uncharacterized protein LOC111496065 isoform X1 [Cucurbita maxima])

HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. ExPASy TrEMBL
Match: A0A6J1KMZ5 (uncharacterized protein LOC111496065 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496065 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. ExPASy TrEMBL
Match: A0A6J1GJ81 (uncharacterized protein LOC111454354 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454354 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. ExPASy TrEMBL
Match: A0A6J1KKD0 (uncharacterized protein LOC111496065 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496065 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. ExPASy TrEMBL
Match: A0A6J1GHY9 (uncharacterized protein LOC111454354 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454354 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.4e-124
Identity = 219/239 (91.63%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSS LCSSIRALAPQ W + NLRF+ILLQSKRC+ FAPRF+ACLSSNDDSVAIPKP PLA
Sbjct: 1   MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDP EE+YGLGVDLKPRNS SS+PEPRSWFGPNGQYI+ELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAK 239

[Close]

BLAST of Spg025402 vs. ExPASy TrEMBL
Match: A0A1S3CPF7 (uncharacterized protein LOC103503314 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503314 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.4e-121
Identity = 215/239 (89.96%), Postives = 224/239 (93.72%), Query Frame = 0


Query: 1   MSSSLCSSIRALAPQYWPQKNLRFYILLQSKRCICFAPRFLACLSSNDDSVAIPKPAPLA 60
           MSSSLC SI AL P YW  KN  F++LLQS RCICFAPRF+ACL  NDDSVAIPKPAPLA
Sbjct: 1   MSSSLCFSIPALTPHYWRSKNFGFFLLLQSNRCICFAPRFVACL-KNDDSVAIPKPAPLA 60

Query: 61  FDPAEELYGLGVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120
           FDPAEELYGL VDLKPRNSASS+PEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER
Sbjct: 61  FDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIER 120

Query: 121 SRADCSVCKGKGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLE 180
           SRADCSVC GKGIVTCHQCLGDRVIWEESIDE+PWEKARSTSPLRMKEDDEVDNLEIKLE
Sbjct: 121 SRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLE 180

Query: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTG+FSKRM+IIHRDP LHAQRVAAIK+ +
Sbjct: 181 EKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMRIIHRDPALHAQRVAAIKKAK 238

[Close]

BLAST of Spg025402 vs. TAIR 10
Match: AT5G20220.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 301.2 bits (770), Expect = 8.2e-82
Identity = 152/229 (66.38%), Postives = 176/229 (76.86%), Query Frame = 0


Query: 19  QKNLRFYILLQSKRCICFAPRFLACLSS------NDDSVAIPKP--APLAFDPAEELYGL 78
           +K  RF  LL       F PR ++  SS      ND SV+  +     + +DP+EEL+  
Sbjct: 3   KKKTRFQFLLNPNSKFVFFPRAISSSSSSSSDNNNDGSVSSSRQNNRQMGYDPSEELF-- 62

Query: 79  GVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCKG 138
           GVD KPR  +  S EPRSWFGPNGQYI+ELPCP+CRGRGY  C+ CGIERSR DC  CKG
Sbjct: 63  GVDFKPRFISGDSREPRSWFGPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCKG 122

Query: 139 KGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQ 198
           KGI+TC +CLGD VIWEESIDE+PWEKARS+SP R+KEDDEVDNLEIK  +++KSKR+YQ
Sbjct: 123 KGIMTCLRCLGDCVIWEESIDERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIYQ 182

Query: 199 SPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           SP PEVG KISRSLKSLNAKTGLFSKRMKIIHRDP LHAQRVAAIK+ +
Sbjct: 183 SPTPEVGQKISRSLKSLNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAK 229

[Close]

BLAST of Spg025402 vs. TAIR 10
Match: AT5G20220.2 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 301.2 bits (770), Expect = 8.2e-82
Identity = 152/229 (66.38%), Postives = 176/229 (76.86%), Query Frame = 0


Query: 19  QKNLRFYILLQSKRCICFAPRFLACLSS------NDDSVAIPKP--APLAFDPAEELYGL 78
           +K  RF  LL       F PR ++  SS      ND SV+  +     + +DP+EEL+  
Sbjct: 3   KKKTRFQFLLNPNSKFVFFPRAISSSSSSSSDNNNDGSVSSSRQNNRQMGYDPSEELF-- 62

Query: 79  GVDLKPRNSASSSPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCKG 138
           GVD KPR  +  S EPRSWFGPNGQYI+ELPCP+CRGRGY  C+ CGIERSR DC  CKG
Sbjct: 63  GVDFKPRFISGDSREPRSWFGPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCKG 122

Query: 139 KGIVTCHQCLGDRVIWEESIDEQPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQ 198
           KGI+TC +CLGD VIWEESIDE+PWEKARS+SP R+KEDDEVDNLEIK  +++KSKR+YQ
Sbjct: 123 KGIMTCLRCLGDCVIWEESIDERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIYQ 182

Query: 199 SPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKRVE 240
           SP PEVG KISRSLKSLNAKTGLFSKRMKIIHRDP LHAQRVAAIK+ +
Sbjct: 183 SPTPEVGQKISRSLKSLNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAK 229

[Close]

BLAST of Spg025402 vs. TAIR 10
Match: AT3G44020.1 (thylakoid lumenal P17.1 protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.1e-04
Identity = 18/47 (38.30%), Postives = 23/47 (48.94%), Query Frame = 0


Query: 100 LPCPSCRGRGYAPCTEC-----GIERSRADCSVCKGKGIVTCHQCLG 142
           +PC  C G G   C  C      +E    DC VCKG G++ C +C G
Sbjct: 106 VPCERCGGNGGTKCVFCLEGKMKVESGMVDCKVCKGSGLIFCKKCGG 152

The following BLAST results are available for this feature:

BLAST of Spg025402 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002096.1	2.8e-124	91.63	uncharacterized protein LOC111496065 isoform X2 [Cucurbita maxima]	[more]
XP_022951581.1	2.8e-124	91.63	uncharacterized protein LOC111454354 isoform X2 [Cucurbita moschata]	[more]
KAG6585819.1	2.8e-124	91.63	DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022951579.1	2.8e-124	91.63	uncharacterized protein LOC111454354 isoform X1 [Cucurbita moschata] >XP_0229515...	[more]
XP_023002093.1	2.8e-124	91.63	uncharacterized protein LOC111496065 isoform X1 [Cucurbita maxima] >XP_023002095...	[more]

BLAST of Spg025402 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025402 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KMZ5	1.4e-124	91.63	uncharacterized protein LOC111496065 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GJ81	1.4e-124	91.63	uncharacterized protein LOC111454354 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KKD0	1.4e-124	91.63	uncharacterized protein LOC111496065 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GHY9	1.4e-124	91.63	uncharacterized protein LOC111454354 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3CPF7	1.4e-121	89.96	uncharacterized protein LOC103503314 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Spg025402 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20220.1	8.2e-82	66.38	zinc knuckle (CCHC-type) family protein	[more]
AT5G20220.2	8.2e-82	66.38	zinc knuckle (CCHC-type) family protein	[more]
AT3G44020.1	3.1e-04	38.30	thylakoid lumenal P17.1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..185
None	No IPR available	PANTHER	PTHR23002:SF109	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 8..238
None	No IPR available	PANTHER	PTHR23002	ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN	coord: 8..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025402.1	Spg025402.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000767	positive regulation of cytoplasmic translation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003727	single-stranded RNA binding
molecular_function	GO:0045182	translation regulator activity
molecular_function	GO:0008270	zinc ion binding