Spg025388 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025388
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	calmodulin-like
Location	scaffold13: 39532313 .. 39532573 (-)
RNA-Seq Expression	Spg025388
Synteny	Spg025388

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAATGCATCCAGCGGACTGCGACTCTCCAGGGAGCAGATGAAGGAGATCTTCAGAGAGCACGACATCAACGGAGATGGTGTATTGAGCATGAGCGAGATGATGAAGTGCTTCAGTTTCCTCGGCAGTGTGCTTCCTTTCTACAAAGCTCACTATGGAATGGCTTATGCTGATACTGATGGTGATGGCTACATCGATGAGGACGAGCTCGACAAGCTCGTCGACTATGCAGAGAGGTTTCAGCGCAAGAAGTGCTGA

mRNA sequence

ATGTCTAATGCATCCAGCGGACTGCGACTCTCCAGGGAGCAGATGAAGGAGATCTTCAGAGAGCACGACATCAACGGAGATGGTGTATTGAGCATGAGCGAGATGATGAAGTGCTTCAGTTTCCTCGGCAGTGTGCTTCCTTTCTACAAAGCTCACTATGGAATGGCTTATGCTGATACTGATGGTGATGGCTACATCGATGAGGACGAGCTCGACAAGCTCGTCGACTATGCAGAGAGGTTTCAGCGCAAGAAGTGCTGA

Coding sequence (CDS)

ATGTCTAATGCATCCAGCGGACTGCGACTCTCCAGGGAGCAGATGAAGGAGATCTTCAGAGAGCACGACATCAACGGAGATGGTGTATTGAGCATGAGCGAGATGATGAAGTGCTTCAGTTTCCTCGGCAGTGTGCTTCCTTTCTACAAAGCTCACTATGGAATGGCTTATGCTGATACTGATGGTGATGGCTACATCGATGAGGACGAGCTCGACAAGCTCGTCGACTATGCAGAGAGGTTTCAGCGCAAGAAGTGCTGA

Protein sequence

MSNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGYIDEDELDKLVDYAERFQRKKC

Homology

[Close]

BLAST of Spg025388 vs. NCBI nr
Match: KAA0060892.1 (putative calcium-binding protein CML10 [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28
Identity = 63/85 (74.12%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MSNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADT 60
          MS A+S L+LSRE +KEIFREHDI+GDG LS+SEM+K F F GS+LPFYKAHYGMA+AD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGYIDEDELDKLVDYAERFQRKK 86
          +GDGYI+E+ELDKLVDYAE+FQ K+
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKR 85

[Close]

BLAST of Spg025388 vs. NCBI nr
Match: KGN62516.1 (hypothetical protein Csa_022521 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26
Identity = 59/85 (69.41%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADT 60
          MS A++ L+LSRE +KEIFREHDI+GDG LSM+EM+K F   GS+LPFYKAHYGMA+AD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGYIDEDELDKLVDYAERFQRKK 86
          +GDG+I+E+ELDKLVDYA++FQ K+
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKR 85

[Close]

BLAST of Spg025388 vs. NCBI nr
Match: XP_004152805.1 (probable calcium-binding protein CML10 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-25
Identity = 57/81 (70.37%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 5   SSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDG 64
           S+ L+LSRE +KEIFREHDI+GDG LSM+EM+K F   GS+LPFYKAHYGMA+AD +GDG
Sbjct: 86  STRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADENGDG 145

Query: 65  YIDEDELDKLVDYAERFQRKK 86
           +I+E+ELDKLVDYA++FQ K+
Sbjct: 146 FIEEEELDKLVDYAQKFQHKR 166

[Close]

BLAST of Spg025388 vs. NCBI nr
Match: KGN62525.1 (hypothetical protein Csa_022453 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 4.0e-24
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 6  SGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGY 65
          S    SRE+MKEIFREHDI+GDG LS+SE++K   FLG  +PFYKAHYGMAY D +GDG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 IDEDELDKLVDYAERFQRKK 86
          I EDELDKL+DYAERFQ+++
Sbjct: 67 ISEDELDKLIDYAERFQKRR 86

[Close]

BLAST of Spg025388 vs. NCBI nr
Match: XP_023002888.1 (calmodulin-like [Cucurbita maxima])

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-23
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 6   SGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGY 65
           + ++LSR Q+KEIF EHDI+GDG LS+SE+ K FSF GS++P YKAHYG+AYAD DGDG 
Sbjct: 81  ASMKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGL 140

Query: 66  IDEDELDKLVDYAERFQRKK 86
           I E+EL+KLVDYAER  +KK
Sbjct: 141 ISEEELEKLVDYAERTNKKK 160

[Close]

BLAST of Spg025388 vs. ExPASy Swiss-Prot
Match: Q9FIH9 (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-06
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 2   SNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTD 61
           SN+S    L+  +++ +F   D N DG +S  E+  C S LG  L   +    +  +D D
Sbjct: 37  SNSSGSSSLNVNELRTVFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVD 96

Query: 62  GDGYIDEDELDKLVD 77
           GDG+ID +E  KL++
Sbjct: 97  GDGFIDFEEFLKLME 111

[Close]

BLAST of Spg025388 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-05
Identity = 29/73 (39.73%), Postives = 37/73 (50.68%), Query Frame = 0


Query: 2   SNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTD 61
           S   S      E+M+ +FR+ D NGDG +S SE+   F  LG      +    MA AD D
Sbjct: 28  SGGGSPAPTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADAD 87

Query: 62  GDGYIDEDELDKL 75
           GDG+I  DE   L
Sbjct: 88  GDGFISLDEFAAL 100

[Close]

BLAST of Spg025388 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-05
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 10 LSREQMKEIFREHDINGDGVLSMSEMMKCF-SFLGSVLPFYKAHYGMAYADTDGDGYIDE 69
          ++ ++ + +F   D +GDG +S +E+  C  + LG  +P  +    MA ADTDGDG +DE
Sbjct: 2  VASDEFRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDE 61

Query: 70 DELDKLVDYAE 80
          +E  +LV   E
Sbjct: 62 EEFVRLVTEME 72

[Close]

BLAST of Spg025388 vs. ExPASy Swiss-Prot
Match: A0T2M3 (Polcalcin Cup a 4 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-05
Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 3  NASSGLRL---SREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYAD 62
          +ASSG R+   S  +++E+F++ D NGDG +S SE+      +GS +   +    M  AD
Sbjct: 12 SASSGKRVLEQSVHELEEVFKKFDANGDGKISGSELADILRSMGSEVDEAEVKAMMEEAD 71

Query: 63 TDGDGYIDEDE 71
          TDGDGY+   E
Sbjct: 72 TDGDGYVSLQE 82

[Close]

BLAST of Spg025388 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.3e-05
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 3   NASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDG 62
           N+S+G   +RE ++ +F   D N DG +S  E+ K F  LG  L   +A   +  +DTDG
Sbjct: 33  NSSNGEDKNRE-LEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDG 92

Query: 63  DGYIDEDELDKLVDYAERFQRK 85
           DG +D +E  +L+   +  ++K
Sbjct: 93  DGMLDFEEFSQLIKVDDEEEKK 113

[Close]

BLAST of Spg025388 vs. ExPASy TrEMBL
Match: A0A5A7UYC0 (Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00250 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 63/85 (74.12%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MSNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADT 60
          MS A+S L+LSRE +KEIFREHDI+GDG LS+SEM+K F F GS+LPFYKAHYGMA+AD 
Sbjct: 1  MSRAASKLQLSREDIKEIFREHDIDGDGRLSLSEMVKAFGFFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGYIDEDELDKLVDYAERFQRKK 86
          +GDGYI+E+ELDKLVDYAE+FQ K+
Sbjct: 61 NGDGYIEEEELDKLVDYAEKFQHKR 85

[Close]

BLAST of Spg025388 vs. ExPASy TrEMBL
Match: A0A0A0LRC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 59/85 (69.41%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MSNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADT 60
          MS A++ L+LSRE +KEIFREHDI+GDG LSM+EM+K F   GS+LPFYKAHYGMA+AD 
Sbjct: 1  MSRAATRLQLSREDIKEIFREHDIDGDGRLSMNEMVKAFGCFGSILPFYKAHYGMAHADE 60

Query: 61 DGDGYIDEDELDKLVDYAERFQRKK 86
          +GDG+I+E+ELDKLVDYA++FQ K+
Sbjct: 61 NGDGFIEEEELDKLVDYAQKFQHKR 85

[Close]

BLAST of Spg025388 vs. ExPASy TrEMBL
Match: A0A0A0LKX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-24
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0


Query: 6  SGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGY 65
          S    SRE+MKEIFREHDI+GDG LS+SE++K   FLG  +PFYKAHYGMAY D +GDG 
Sbjct: 7  SKFNFSREEMKEIFREHDIDGDGYLSISELIKAMGFLGHSIPFYKAHYGMAYCDENGDGL 66

Query: 66 IDEDELDKLVDYAERFQRKK 86
          I EDELDKL+DYAERFQ+++
Sbjct: 67 ISEDELDKLIDYAERFQKRR 86

[Close]

BLAST of Spg025388 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-24
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 6   SGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGY 65
           + ++LSR Q+KEIF EHDI+GDG LS+SE+ K FSF GS++P YKAHYG+AYAD DGDG 
Sbjct: 81  ASMKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGL 140

Query: 66  IDEDELDKLVDYAERFQRKK 86
           I E+EL+KLVDYAER  +KK
Sbjct: 141 ISEEELEKLVDYAERTNKKK 160

[Close]

BLAST of Spg025388 vs. ExPASy TrEMBL
Match: A0A6J1GK16 (calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-24
Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0


Query: 6   SGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGY 65
           + ++LSR Q+KEIF EHDI+GDG LS+SE+ K FSF GS++P YKAHYG+AYAD DGDG 
Sbjct: 81  ASMKLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGL 140

Query: 66  IDEDELDKLVDYAERFQRKK 86
           I E+EL+KLVDYAER  +KK
Sbjct: 141 ISEEELEKLVDYAERTNKKK 160

[Close]

BLAST of Spg025388 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 )

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 2   SNASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTD 61
           SN+S    L+  +++ +F   D N DG +S  E+  C S LG  L   +    +  +D D
Sbjct: 37  SNSSGSSSLNVNELRTVFDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVD 96

Query: 62  GDGYIDEDELDKLVD 77
           GDG+ID +E  KL++
Sbjct: 97  GDGFIDFEEFLKLME 111

[Close]

BLAST of Spg025388 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 3   NASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDG 62
           N+S+G   +RE ++ +F   D N DG +S  E+ K F  LG  L   +A   +  +DTDG
Sbjct: 33  NSSNGEDKNRE-LEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDG 92

Query: 63  DGYIDEDELDKLVDYAERFQRK 85
           DG +D +E  +L+   +  ++K
Sbjct: 93  DGMLDFEEFSQLIKVDDEEEKK 113

[Close]

BLAST of Spg025388 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 3   NASSGLRLSREQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDG 62
           N+S+G   +RE ++ +F   D N DG +S  E+ K F  LG  L   +A   +  +DTDG
Sbjct: 33  NSSNGEDKNRE-LEAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDG 92

Query: 63  DGYIDEDELDKLVDYAERFQRK 85
           DG +D +E  +L+   +  ++K
Sbjct: 93  DGMLDFEEFSQLIKVDDEEEKK 113

[Close]

BLAST of Spg025388 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 44.3 bits (103), Expect = 5.8e-05
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 13 EQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGYIDEDELD 72
          E++K++F + D NGDG +S+ E+   F  +G+     + +  +   DTD DGYI+ DE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 73 KL 75
           L
Sbjct: 82 TL 83

[Close]

BLAST of Spg025388 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 44.3 bits (103), Expect = 5.8e-05
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 13 EQMKEIFREHDINGDGVLSMSEMMKCFSFLGSVLPFYKAHYGMAYADTDGDGYIDEDELD 72
          E++K++F + D NGDG +S+ E+   F  +G+     + +  +   DTD DGYI+ DE  
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 73 KL 75
           L
Sbjct: 82 TL 83

The following BLAST results are available for this feature:

BLAST of Spg025388 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060892.1	2.1e-28	74.12	putative calcium-binding protein CML10 [Cucumis melo var. makuwa]	[more]
KGN62516.1	2.5e-26	69.41	hypothetical protein Csa_022521 [Cucumis sativus]	[more]
XP_004152805.1	3.6e-25	70.37	probable calcium-binding protein CML10 [Cucumis sativus]	[more]
KGN62525.1	4.0e-24	68.75	hypothetical protein Csa_022453 [Cucumis sativus]	[more]
XP_023002888.1	1.2e-23	67.50	calmodulin-like [Cucurbita maxima]	[more]

BLAST of Spg025388 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FIH9	5.1e-06	34.67	Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1	[more]
Q8RZB5	1.1e-05	39.73	Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8RYJ9	1.9e-05	36.62	Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A0T2M3	1.9e-05	39.44	Polcalcin Cup a 4 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=1	[more]
Q9SRE6	3.3e-05	34.15	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1	[more]

BLAST of Spg025388 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYC0	1.0e-28	74.12	Putative calcium-binding protein CML10 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LRC1	1.2e-26	69.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G358870 PE=4 SV=1	[more]
A0A0A0LKX1	1.9e-24	68.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359940 PE=4 SV=1	[more]
A0A6J1KUW2	5.7e-24	67.50	calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1	[more]
A0A6J1GK16	5.7e-24	67.50	calmodulin-like OS=Cucurbita moschata OX=3662 GN=LOC111454616 PE=4 SV=1	[more]

BLAST of Spg025388 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42380.1	3.6e-07	34.67	calmodulin like 37	[more]
AT1G76650.1	2.4e-06	34.15	calmodulin-like 38	[more]
AT1G76650.3	2.4e-06	34.15	calmodulin-like 38	[more]
AT1G18210.1	5.8e-05	35.48	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	5.8e-05	35.48	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 14..42 e-value: 0.031 score: 23.4 coord: 50..78 e-value: 45.0 score: 4.4
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 58..75 e-value: 1.7E-4 score: 20.9
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 14..43 e-value: 9.5E-7 score: 28.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 10..45 score: 13.286007
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 59..81 score: 8.54379
None	No IPR available	GENE3D	1.10.238.10		coord: 2..81 e-value: 7.2E-13 score: 50.8
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 23..35
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 59..71
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 8..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025388.1	Spg025388.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding