Spg025373 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGATTTAATTTTGAATATAATTGGAAGGTTTTGCGTGTTCAATAATGAAGATTCGTGGTGGCGGTGCCAACTGTAACATAGCTGTCAGTAAGTAAATTCCATTGCTTCAAAATCTCCTTCTTCAACCTCACGCCAGATATTTTATTTCCCTTTTTACCCTTTGCCCTTTTTAAGTTCTCACTCAGCAAAACGCGTCGCCCTCTCTAATGGCCTTTCCATTCAACTCTCCATTTTCACTCTCTTGAACATCTCACTGCAACTCCACTGCTCTCTACAAACATACCAATATCCCTCTCAAGGAGAAGAGCTCCACGGGAAACTGCCACAATGCACGCTAAAACCGACTCCGAAGTCACCAGTATCGCCCCGTCTTCTCCGACGAGATCTCCCCGCCGGCCGGTCTATTACGTTCAGAGCCCTTCCAGAGACTCTCACGATGGGGAGAAGACTGCGACGTCGTTTCACTCTACTCCTGTTCTCACTAGCCCCATGGATTCCCCTCCTCATTCTCGCTCCTCCGTCGGCCGTCACTCCAGAGAATCCTCCTCCAGCAGATTCTCCGGATCTCTGAAACCTGGATCCAGGAAGATCTCTCCCAATGACGTCTCTCGCGGCGGCGCTGGCGGCCATCGGAAGGGACAGAAGCCATGGAAGGAGTGCGATGTCATCGAAGAGGAAGGTCTTCTTGAAGATGAAGATCGGGGGAAATCTCTTCCTCGTCGCTGCTATGTTCTCGCTTTCATTTTGGGATTTTTTGTTCTGTTTTCTATGTTCGCTTTGATTCTCTGGGGTGCTAGCAGGCCGATGAAGCCCAAGGTCACGATGAAGGTACAAATGGCCAGATTTTTCAGATAATGGCTTTCTTTATTTGTTGAATTCCGGATTTAGTTTCTTTCAATTGCAGAGCATTACATTCGAGCAATTCAAAATCCAAGCCGGTTCCGATTTCACCGGCGTCGCCACCGACATGGCCTCTGTAAATTCCACTGTGAAACTCACATTTCGAAACACCGGAACATTCTTCGGCGTCCATGTCTCATCAACTCCCGTCGATCTAACATATTCCGAAATCTCAGTCGCATCAGGAACCGTAAGTTCCCAAAACCCTAACCCCCGAAATTTTGATCATTGAATCTCAACCAATTGTGGAAATTTGCAGGTAAAGAAGTTCTATCAATCACGGAAGAGTCAGAGATCTCTCACCATCAACGTAATCGGCACCAGAATCCCACTGTACGGCAGCGGAGCAAGTCTGAGCAGCTCTACCGGAACTCCGGCGACTCCAGTACCATTGAAACTGAGCTTCGTGATCAGATCCAGAGCCTACGTGTTGGGCCAATTAGTGAAGCCAAAATTCTACAGACATGTTGATTGCCCCATAATTTTCGATCCCAAGAAACTCAACGTCCCCATGTCACTCAAGAATTGCACAGTCAGTTGAAAACGAAATCGAAATCGAAATCAAGAATCTGTTCAACATTTATTAAAATCAGTACTTGTTTATTTGTTCTTGAGGTGTCTAGGAATGGCGAACTGCGACAGCTCGAAAGCGGCAGCAGAACAGAAACGGGCGACGCCGAACGGGAAGGGCAATAGAGGAATAAGCTACAATAACGGGGTTTCGGCTGTCTGCCCGTTTGCCCGAGTAGTGCAGTACAGGTTGGTTTCCGGGCAGCGACACGTGAATGGACGTGGGCTTAATTTTTTTTTATTTATTTTGGTTTTAAATTATCTCATTCTTTTGATTACGGTGTGAGTGAAGATAATCATAATTTATAATATAATTAATTTTAATTTACATTATGCTTGTTCCATCATTGTAGTATTATTATTCTTAATAATGGATTACGTATATTTTTAGAGTCTGATTTGGCCCATAATGAACGGTGGCTGATTGGTAAAATAATTGTGTCTGGAAGGGTCAGTTTGTCTTTTGGATGTTTGTTGTTGAGTACCATTTTAGTCAAACTTGAGATCAATTATTTATACTTTTTTTGTTCTAATTTCTTTCATGAAATTGGTAGAGATTATTAAAATGATTTTTTTTGGTGTCTCATAAGTCACAAGCACTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAGTCACAAGCATAATTTCAAGCATTTTTTTTAATGCATGTAGCAAGGCATGCATGTGATGTTTTTTGACTTCATAATTGTACTAAAAAGAAGGGCTTCATATATAATTTTATTTGTTTGTATATTTGACTTTATGATTGATATCCAAACCTGAATTGTTAATTAGCTAGTAGGATGAATGGGTTTCTTTAGTTATTGGAAAATATATAAACTTATTATTGAAATTATGATTATTCCTGAATTAGTGATCAAAGTTTTTGCCTCTAATGGAGCTTAGGAGGCATTTTGTTCGCTGATGACCCGCCATATGGCAAAACTCATAAATTTATCTATAAAGAAAAATTTTATATGGGTAATTTAAATTCTGAAAGCAAAATCATAATGAAAGATAAAACCCTCCTAACTTTTTTTTTTTTTTTTTTAATTATTATAATTATATGTTAATGCCCACTCAAGAAAAAGTATAGTTTACTAGCTAATGGGAGTATGGTGCAATTGTTAGAAGAGATTGTAGGTTTAAATCTCATAGGACCCACAATTAAAAGAGAGGATTTCAAATCTCCCTTCCCACATGTTAAAGAAACAAAAATATTAGAAGAGGAGATGTAGAAAGAAAGAATGAATATGGTTTTTCTTTATGTGCGCTAATGATTTCTACATTGGTTTTTGATTGCTGACGAGGTTGATGATGTATTTCAAATTCAACTATGCTCATGTCGGTAGAAAATTCATACTTATTGGTAGTAGCAAAGTAATATTCTCCTTTTATGCTCTACTTGATATATTACACATTTCAAGCTACAATTTTCTTTTTCTTTTTCTTTGTTGATGTACTTTTTTTCCTTTTTTTTTTTTTTTTAATATATACTGACATTTAATTTTTTTAAATAATAAGTAAAGAAAAACAAAAGAATAATG ATGCACGCTAAAACCGACTCCGAAGTCACCAGTATCGCCCCGTCTTCTCCGACGAGATCTCCCCGCCGGCCGGTCTATTACGTTCAGAGCCCTTCCAGAGACTCTCACGATGGGGAGAAGACTGCGACGTCGTTTCACTCTACTCCTGTTCTCACTAGCCCCATGGATTCCCCTCCTCATTCTCGCTCCTCCGTCGGCCGTCACTCCAGAGAATCCTCCTCCAGCAGATTCTCCGGATCTCTGAAACCTGGATCCAGGAAGATCTCTCCCAATGACGTCTCTCGCGGCGGCGCTGGCGGCCATCGGAAGGGACAGAAGCCATGGAAGGAGTGCGATGTCATCGAAGAGGAAGGTCTTCTTGAAGATGAAGATCGGGGGAAATCTCTTCCTCGTCGCTGCTATGTTCTCGCTTTCATTTTGGGATTTTTTGTTCTGTTTTCTATGTTCGCTTTGATTCTCTGGGGTGCTAGCAGGCCGATGAAGCCCAAGGTCACGATGAAGAGCATTACATTCGAGCAATTCAAAATCCAAGCCGGTTCCGATTTCACCGGCGTCGCCACCGACATGGCCTCTGTAAATTCCACTGTGAAACTCACATTTCGAAACACCGGAACATTCTTCGGCGTCCATGTCTCATCAACTCCCGTCGATCTAACATATTCCGAAATCTCAGTCGCATCAGGAACCGTAAAGAAGTTCTATCAATCACGGAAGAGTCAGAGATCTCTCACCATCAACGTAATCGGCACCAGAATCCCACTGTACGGCAGCGGAGCAAGTCTGAGCAGCTCTACCGGAACTCCGGCGACTCCAGTACCATTGAAACTGAGCTTCGTGATCAGATCCAGAGCCTACGTGTTGGGCCAATTAGTGAAGCCAAAATTCTACAGACATGTTGATTGCCCCATAATTTTCGATCCCAAGAAACTCAACGTCCCCATGTCACTCAAGAATTGCACAGTCAGTTGA ATGCACGCTAAAACCGACTCCGAAGTCACCAGTATCGCCCCGTCTTCTCCGACGAGATCTCCCCGCCGGCCGGTCTATTACGTTCAGAGCCCTTCCAGAGACTCTCACGATGGGGAGAAGACTGCGACGTCGTTTCACTCTACTCCTGTTCTCACTAGCCCCATGGATTCCCCTCCTCATTCTCGCTCCTCCGTCGGCCGTCACTCCAGAGAATCCTCCTCCAGCAGATTCTCCGGATCTCTGAAACCTGGATCCAGGAAGATCTCTCCCAATGACGTCTCTCGCGGCGGCGCTGGCGGCCATCGGAAGGGACAGAAGCCATGGAAGGAGTGCGATGTCATCGAAGAGGAAGGTCTTCTTGAAGATGAAGATCGGGGGAAATCTCTTCCTCGTCGCTGCTATGTTCTCGCTTTCATTTTGGGATTTTTTGTTCTGTTTTCTATGTTCGCTTTGATTCTCTGGGGTGCTAGCAGGCCGATGAAGCCCAAGGTCACGATGAAGAGCATTACATTCGAGCAATTCAAAATCCAAGCCGGTTCCGATTTCACCGGCGTCGCCACCGACATGGCCTCTGTAAATTCCACTGTGAAACTCACATTTCGAAACACCGGAACATTCTTCGGCGTCCATGTCTCATCAACTCCCGTCGATCTAACATATTCCGAAATCTCAGTCGCATCAGGAACCGTAAAGAAGTTCTATCAATCACGGAAGAGTCAGAGATCTCTCACCATCAACGTAATCGGCACCAGAATCCCACTGTACGGCAGCGGAGCAAGTCTGAGCAGCTCTACCGGAACTCCGGCGACTCCAGTACCATTGAAACTGAGCTTCGTGATCAGATCCAGAGCCTACGTGTTGGGCCAATTAGTGAAGCCAAAATTCTACAGACATGTTGATTGCCCCATAATTTTCGATCCCAAGAAACTCAACGTCCCCATGTCACTCAAGAATTGCACAGTCAGTTGA MHAKTDSEVTSIAPSSPTRSPRRPVYYVQSPSRDSHDGEKTATSFHSTPVLTSPMDSPPHSRSSVGRHSRESSSSRFSGSLKPGSRKISPNDVSRGGAGGHRKGQKPWKECDVIEEEGLLEDEDRGKSLPRRCYVLAFILGFFVLFSMFALILWGASRPMKPKVTMKSITFEQFKIQAGSDFTGVATDMASVNSTVKLTFRNTGTFFGVHVSSTPVDLTYSEISVASGTVKKFYQSRKSQRSLTINVIGTRIPLYGSGASLSSSTGTPATPVPLKLSFVIRSRAYVLGQLVKPKFYRHVDCPIIFDPKKLNVPMSLKNCTVS Homology
BLAST of Spg025373 vs. NCBI nr
Match: KAA0060912.1 (Late embryogenesis abundant protein, LEA-14 [Cucumis melo var. makuwa]) HSP 1 Score: 600.5 bits (1547), Expect = 8.5e-168 Identity = 307/321 (95.64%), Postives = 314/321 (97.82%), Query Frame = 0
BLAST of Spg025373 vs. NCBI nr
Match: XP_008444608.1 (PREDICTED: uncharacterized protein LOC103487879 [Cucumis melo]) HSP 1 Score: 597.4 bits (1539), Expect = 7.2e-167 Identity = 306/321 (95.33%), Postives = 313/321 (97.51%), Query Frame = 0
BLAST of Spg025373 vs. NCBI nr
Match: XP_022132311.1 (uncharacterized protein LOC111005194 [Momordica charantia]) HSP 1 Score: 594.3 bits (1531), Expect = 6.1e-166 Identity = 305/322 (94.72%), Postives = 316/322 (98.14%), Query Frame = 0
BLAST of Spg025373 vs. NCBI nr
Match: XP_038884165.1 (uncharacterized protein LOC120075075 [Benincasa hispida]) HSP 1 Score: 592.0 bits (1525), Expect = 3.0e-165 Identity = 302/321 (94.08%), Postives = 311/321 (96.88%), Query Frame = 0
BLAST of Spg025373 vs. NCBI nr
Match: XP_004142871.1 (uncharacterized protein LOC101203977 [Cucumis sativus] >KGN62494.1 hypothetical protein Csa_018716 [Cucumis sativus]) HSP 1 Score: 586.3 bits (1510), Expect = 1.7e-163 Identity = 299/321 (93.15%), Postives = 309/321 (96.26%), Query Frame = 0
BLAST of Spg025373 vs. ExPASy TrEMBL
Match: A0A5A7UYD8 (Late embryogenesis abundant protein, LEA-14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00450 PE=4 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 4.1e-168 Identity = 307/321 (95.64%), Postives = 314/321 (97.82%), Query Frame = 0
BLAST of Spg025373 vs. ExPASy TrEMBL
Match: A0A1S3BBJ5 (uncharacterized protein LOC103487879 OS=Cucumis melo OX=3656 GN=LOC103487879 PE=4 SV=1) HSP 1 Score: 597.4 bits (1539), Expect = 3.5e-167 Identity = 306/321 (95.33%), Postives = 313/321 (97.51%), Query Frame = 0
BLAST of Spg025373 vs. ExPASy TrEMBL
Match: A0A6J1BRX1 (uncharacterized protein LOC111005194 OS=Momordica charantia OX=3673 GN=LOC111005194 PE=4 SV=1) HSP 1 Score: 594.3 bits (1531), Expect = 2.9e-166 Identity = 305/322 (94.72%), Postives = 316/322 (98.14%), Query Frame = 0
BLAST of Spg025373 vs. ExPASy TrEMBL
Match: A0A0A0LNF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356680 PE=4 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 8.0e-164 Identity = 299/321 (93.15%), Postives = 309/321 (96.26%), Query Frame = 0
BLAST of Spg025373 vs. ExPASy TrEMBL
Match: A0A6J1GJ34 (uncharacterized protein LOC111454665 OS=Cucurbita moschata OX=3662 GN=LOC111454665 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.2e-162 Identity = 299/322 (92.86%), Postives = 307/322 (95.34%), Query Frame = 0
BLAST of Spg025373 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 426.8 bits (1096), Expect = 1.6e-119 Identity = 223/344 (64.83%), Postives = 272/344 (79.07%), Query Frame = 0
BLAST of Spg025373 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 354.8 bits (909), Expect = 7.5e-98 Identity = 193/345 (55.94%), Postives = 252/345 (73.04%), Query Frame = 0
BLAST of Spg025373 vs. TAIR 10
Match: AT1G45688.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 334.3 bits (856), Expect = 1.1e-91 Identity = 172/242 (71.07%), Postives = 205/242 (84.71%), Query Frame = 0
BLAST of Spg025373 vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 177.9 bits (450), Expect = 1.3e-44 Identity = 131/325 (40.31%), Postives = 177/325 (54.46%), Query Frame = 0
BLAST of Spg025373 vs. TAIR 10
Match: AT4G35170.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 162.2 bits (409), Expect = 7.2e-40 Identity = 116/315 (36.83%), Postives = 172/315 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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