Spg025368 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025368
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Thioredoxin
Location	scaffold13: 39621107 .. 39623511 (+)
RNA-Seq Expression	Spg025368
Synteny	Spg025368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATAATGGTGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCAGAGGTAAGCCACTGGTCCATCATTTGTTGCTTTCCCTCGTAAATTTTTCACACCCTTCCTTCTCTTAACAGTTACTTTTCATCTCTCTGAATCGATTATCGAAATTTCCTCCTGCTTTATCATGATTAATGTTAAATAAGATTCATGGGTTTGAAATACTGAATTGAATGCTACATCTGAATCTGTTTTATTAGCTTTCTGACTGAAGTTCATTCACTAAACAAGACCCAAATCGGAATTGTGGGTACATATATGTTGCAATGCAAAGGCAGAACCAGACTGCACTGCAATGTAAAGCATTATTCAGTTTCGGATTAAACCCCAATGAAGAACTCGAATCGAGAATCCCCATTTCAATTCCCTTCTGGTTGCCCGAGAAAGAACATGTTCGATTGTCGATTACAAGACCCGAAGTTCCACCATGTCTGAATATCAGACATGGATTCTTGTTCAAGAGCAAAATCAGGGTCGCTGCTGGAAATCAGGGGGAGTTGTCTGATGAAGATGATGATCTTTGCCCTGTAGATTGTGTGAGAGAATTCAAGACGGATGAAGAGTTCATTAGAATTCTAGACAGGGCAAAGGAAAGTGGTGCTTTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGCTGCAAGTATATAGAACAAGGGTTTGCAAAACTGTGTAAGGGCTCTGGTGATCAAGAGGCTCCGGTTATCTTCTTGAAGCATAATGTGAGTATGTATAACAGCAAAGTTTTTTGTTGGGGAAATGAATTTTCGTTCTGCCATTGAATGCTTATGCTTTGAATGTGTATGTGGTTTTAGGTCATTGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGGTAAGTTTATTTTATCTTCTTGAGGTTTTTTGGTATCTTTGAATGTTGGGTGGTGTTGAACTGAAGTGAAGTTTTGGTTTCTGGACTGGTTTTGGTTTGTTGGGGAACCTTAATGGCTTTTGAGATTGGATCTTTCGGATCAATTTCCATTGGATTTCATCTTACATTTGAGCTTTTTTTTTTCCTTCTCTTGATTTGGAAAGTTTGGGAAAAAATAGAAAACGAAACTTGTTCTGTTCTTCATTATTATTATTATTTTTTTTTTAAAACTTTGGTGCATCTTTTGAGAACTAGTTTATGAACAGCAACTACTTCTGAAAGCAGATTAAAAAATGTATATTGAAAAAAGACATATGTCGTTTCTGTTTCTGTTTTATTTATTTATTTATCTAAAGTTTAGTACTTGAAGAAGGCAAATTAGAAAAAAAATATTAATTTTGTGTCTAGTAAGTGCGTGAATTTTTAAAAATTGTCAAATACATTCGGGACCAATTAAACTCAAAATTAAGGTTTTGCCAGTTGAGCTAAGCTTTTTTTTTTTTTTTTTTTTATCCTACACTTTCATGTTTTTGTCAATAAGTTCCTAAATTTAAAAAAAAAAAAATACATTTTTAATTTTATCTAATATACTCGGAACTTTAAAAGTATCTAATAGATTTATGAACTTTCACTTGTGTGCCTAATAAGTCTCTCTAACATATTTGACATTTTAAAAAATTTAACAGATCTATTAGACATAAAATTAAATCTTGTATCTAACCGATAGTAAGCTTTCAATGTTAATTAGGTCAAGAATCTACAAATACAAAATTGAAAGTTTAGATACTTATTTAACACTAGTTAAAGTTTAGAATTTAATAGATAGTTTATAAAGTTCAAAAATTTATTAAGCAAAGGTATGAAAATTAAGTGTTAAACTTGTAGTACTAAAATAAAACAAAAAGTGTTAAACTTGTAACTTGATTTTTTTTTTCATTTTCCTATTCTTCAACAACAATTTTGGCTAATAGTTATACAAATATTAAGAATTGTACACATCTCCACGATATTTGGATAGCCCTCTCCAGTCTCAAAAAAAAAAAAAAAAAAAAAGAAAAAAGATAGCCCTCTCCCATTACTAAGAATGTATTATAGTTGCTTCATTCATATACTCCCTTTCGATTTTACAAATAAAATGAGCTTTCAAAAGCTATACCGACAGATCAAGAGGTCTGTGGTTCGAACTTGTCACCCTCACATGTTGTCAAAAAAAAAAAAAAAAGCTATACTGACAGGATCATCCAATAGGGAACAAAGAGATTGTGTTTTGTTTTTGCATATTTGTTCACTAATGATGAAAATTGATGGTTGCAGACAGTGCCACTGTTCCATTTCTATAAAGATGGTGTCTTATTAGAAGCATTTCCCACCAGAGACAAAGAGAGGATTCTTGCAGCCATTAGCAAATATTCATCAATTGCACTTCAATTTTGA

mRNA sequence

ATGGTGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCAGAGTTCATTCACTAAACAAGACCCAAATCGGAATTGTGGGTACATATATGTTGCAATGCAAAGGCAGAACCAGACTGCACTGCAATGTAAAGCATTATTCAGTTTCGGATTAAACCCCAATGAAGAACTCGAATCGAGAATCCCCATTTCAATTCCCTTCTGGTTGCCCGAGAAAGAACATGTTCGATTGTCGATTACAAGACCCGAAGTTCCACCATGTCTGAATATCAGACATGGATTCTTGTTCAAGAGCAAAATCAGGGTCGCTGCTGGAAATCAGGGGGAGTTGTCTGATGAAGATGATGATCTTTGCCCTGTAGATTGTGTGAGAGAATTCAAGACGGATGAAGAGTTCATTAGAATTCTAGACAGGGCAAAGGAAAGTGGTGCTTTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGCTGCAAGTATATAGAACAAGGGTTTGCAAAACTGTGTAAGGGCTCTGGTGATCAAGAGGCTCCGGTTATCTTCTTGAAGCATAATGTCATTGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGACAGTGCCACTGTTCCATTTCTATAAAGATGGTGTCTTATTAGAAGCATTTCCCACCAGAGACAAAGAGAGGATTCTTGCAGCCATTAGCAAATATTCATCAATTGCACTTCAATTTTGA

Coding sequence (CDS)

ATGGTGGAGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCAGAGTTCATTCACTAAACAAGACCCAAATCGGAATTGTGGGTACATATATGTTGCAATGCAAAGGCAGAACCAGACTGCACTGCAATGTAAAGCATTATTCAGTTTCGGATTAAACCCCAATGAAGAACTCGAATCGAGAATCCCCATTTCAATTCCCTTCTGGTTGCCCGAGAAAGAACATGTTCGATTGTCGATTACAAGACCCGAAGTTCCACCATGTCTGAATATCAGACATGGATTCTTGTTCAAGAGCAAAATCAGGGTCGCTGCTGGAAATCAGGGGGAGTTGTCTGATGAAGATGATGATCTTTGCCCTGTAGATTGTGTGAGAGAATTCAAGACGGATGAAGAGTTCATTAGAATTCTAGACAGGGCAAAGGAAAGTGGTGCTTTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGCTGCAAGTATATAGAACAAGGGTTTGCAAAACTGTGTAAGGGCTCTGGTGATCAAGAGGCTCCGGTTATCTTCTTGAAGCATAATGTCATTGATGAATATGATGAACAATCTGAGGTTGCTGAACGACTAAGGATCAAGACAGTGCCACTGTTCCATTTCTATAAAGATGGTGTCTTATTAGAAGCATTTCCCACCAGAGACAAAGAGAGGATTCTTGCAGCCATTAGCAAATATTCATCAATTGCACTTCAATTTTGA

Protein sequence

MVESCHFLVRSCSSALLPAQSSFTKQDPNRNCGYIYVAMQRQNQTALQCKALFSFGLNPNEELESRIPISIPFWLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYSSIALQF

Homology

[Close]

BLAST of Spg025368 vs. NCBI nr
Match: XP_022951253.1 (thioredoxin-like 4, chloroplastic [Cucurbita moschata] >KAG6585666.1 Thioredoxin-like 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020572.1 Thioredoxin-like 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 205/248 (82.66%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MVESCHFLVRSCSSALLPAQSSFTKQDPNRNCGYIYVAMQRQNQTALQCKALFSFGLNPN 60
           MVESCHFLVRSCSSALLPAQS   +         +YVAMQRQNQ  L+CKAL S G    
Sbjct: 1   MVESCHFLVRSCSSALLPAQSFPIEVHSLNKTQILYVAMQRQNQNVLKCKALLSVG---- 60

Query: 61  EELESR-IPISIPFWLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKIRVAAGNQGELSDE 120
            +LESR IPISIPFWL E  HVRLSITRPE PP L+IRH  +FKSK RVAAGNQG LSDE
Sbjct: 61  -KLESRIIPISIPFWLSENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQGGLSDE 120

Query: 121 DDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSG 180
           DDDLCPV+CVREFKTDEEFIRIL+RAKESGALVVVDFYRTSCGSCKYIEQGFAKLC+GSG
Sbjct: 121 DDDLCPVECVREFKTDEEFIRILERAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGSG 180

Query: 181 DQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAIS 240
           DQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAI+
Sbjct: 181 DQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAIT 240

Query: 241 KYSSIALQ 248
           KYSS ALQ
Sbjct: 241 KYSSTALQ 243

[Close]

BLAST of Spg025368 vs. NCBI nr
Match: XP_023537391.1 (thioredoxin-like 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 3.4e-108
Identity = 205/248 (82.66%), Postives = 215/248 (86.69%), Query Frame = 0


Query: 1   MVESCHFLVRSCSSALLPAQSSFTKQDPNRNCGYIYVAMQRQNQTALQCKALFSFGLNPN 60
           MVESCHFLVRSCSSALLPAQS   +         +YVAMQRQNQ  L+CKAL S G    
Sbjct: 1   MVESCHFLVRSCSSALLPAQSFPIEVHSLNKTQILYVAMQRQNQNVLKCKALLSVG---- 60

Query: 61  EELESR-IPISIPFWLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKIRVAAGNQGELSDE 120
            +LESR IPISIPFWL E  HVRLSITRPE PP L+IRH  +FKSK RVAAGNQ  LSDE
Sbjct: 61  -KLESRIIPISIPFWLSENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQAGLSDE 120

Query: 121 DDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSG 180
           DDDLCPV+CVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLC+GSG
Sbjct: 121 DDDLCPVECVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGSG 180

Query: 181 DQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAIS 240
           DQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAI+
Sbjct: 181 DQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAIT 240

Query: 241 KYSSIALQ 248
           KYSS ALQ
Sbjct: 241 KYSSTALQ 243

[Close]

BLAST of Spg025368 vs. NCBI nr
Match: XP_023522900.1 (thioredoxin-like 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363.6 bits (932), Expect = 1.3e-96
Identity = 182/210 (86.67%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 39  MQRQNQTALQCKALFSFGLNPNEELESR-IPISIPFWLPEKEHVRLSITRPEVPPCLNIR 98
           MQRQNQ  L+CKAL S G     +LESR IPISIPFWL E  HVRLSITRPE PP L+IR
Sbjct: 1   MQRQNQNVLKCKALLSVG-----KLESRIIPISIPFWLSENPHVRLSITRPEAPPYLSIR 60

Query: 99  HGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFY 158
           H  +FKSK RVAAGNQG LSDEDDDLCPV+CVREFKTDEEFIRILDRAKESGALVVVDFY
Sbjct: 61  HELMFKSKPRVAAGNQGGLSDEDDDLCPVECVREFKTDEEFIRILDRAKESGALVVVDFY 120

Query: 159 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFY 218
           RTSCGSCKYIEQGFAKLC+GSGDQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFY
Sbjct: 121 RTSCGSCKYIEQGFAKLCRGSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFY 180

Query: 219 KDGVLLEAFPTRDKERILAAISKYSSIALQ 248
           KDGVLLEAFPTRDKERILAAI+KYSS ALQ
Sbjct: 181 KDGVLLEAFPTRDKERILAAITKYSSTALQ 205

[Close]

BLAST of Spg025368 vs. NCBI nr
Match: XP_038886222.1 (thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886224.1 thioredoxin-like 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 2.3e-96
Identity = 182/210 (86.67%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 39  MQRQNQTALQCKALFSFGLNPNEELESRIPISIPFWL-PEKEHVRLSITRPEVPPCLNIR 98
           MQRQN+  LQCKAL SFGLNPNEELESRIPISIP WL  EK +VRLSITRPEVP     R
Sbjct: 1   MQRQNRNVLQCKALISFGLNPNEELESRIPISIPRWLSSEKGNVRLSITRPEVP-----R 60

Query: 99  HGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFY 158
              LFKSKIRV AGNQGEL D+DD+LCPVDCVREFKTDEEF++ILDRAKE+G LVVVDFY
Sbjct: 61  QQLLFKSKIRVTAGNQGELFDDDDELCPVDCVREFKTDEEFLKILDRAKENGTLVVVDFY 120

Query: 159 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFY 218
           RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFY
Sbjct: 121 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFY 180

Query: 219 KDGVLLEAFPTRDKERILAAISKYSSIALQ 248
           KDGVLLEAFPTRDKERIL AISKYSS ALQ
Sbjct: 181 KDGVLLEAFPTRDKERILTAISKYSSSALQ 205

[Close]

BLAST of Spg025368 vs. NCBI nr
Match: XP_023001835.1 (thioredoxin-like 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-94
Identity = 179/210 (85.24%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 39  MQRQNQTALQCKALFSFGLNPNEELESR-IPISIPFWLPEKEHVRLSITRPEVPPCLNIR 98
           MQRQNQ  L+CKAL SFG +     ESR IPISIPFWL E  HVRLSI RPE PP L+IR
Sbjct: 1   MQRQNQNVLKCKALPSFGKH-----ESRIIPISIPFWLSENPHVRLSIIRPEAPPYLSIR 60

Query: 99  HGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFY 158
           H  +FKSK RVAAGNQG LSDEDDDLCPV+CVREFKTDEEFIRIL+RAK+SGALVVVDFY
Sbjct: 61  HELMFKSKPRVAAGNQGGLSDEDDDLCPVECVREFKTDEEFIRILERAKKSGALVVVDFY 120

Query: 159 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFY 218
           RTSCGSCKYIEQGFAKLC+GSGDQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFY
Sbjct: 121 RTSCGSCKYIEQGFAKLCRGSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFY 180

Query: 219 KDGVLLEAFPTRDKERILAAISKYSSIALQ 248
           KDGVLLEAFPTRDKERILAAI+KYSS ALQ
Sbjct: 181 KDGVLLEAFPTRDKERILAAITKYSSTALQ 205

[Close]

BLAST of Spg025368 vs. ExPASy Swiss-Prot
Match: Q9C5C5 (Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.7e-60
Identity = 116/172 (67.44%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 74  WLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKI--RVAAGNQGELSDEDDDLCPVDCVRE 133
           W+     VRLS  R E    +NI  G   +  I   ++  N  ELSDE+DDLCPV+CV E
Sbjct: 32  WVWHNNGVRLSFPRAE--SSINITMGCTLQRGIAKSLSQENLVELSDENDDLCPVECVTE 91

Query: 134 FKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHN 193
           FKTD+E + +L+++KE+ +LVVVDFYRT+CGSCKYIEQGF+KLCK SGDQEAPVIFLKHN
Sbjct: 92  FKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHN 151

Query: 194 VIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYSS 244
           V+DEYDEQSEVAERLRIK VPLFHFYK+GVLLE+F TRDKERI AAI KY+S
Sbjct: 152 VVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKYTS 201

[Close]

BLAST of Spg025368 vs. ExPASy Swiss-Prot
Match: Q6YTI3 (Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0567100 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-53
Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 116 LSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLC 175
           + +E+++ CPV+CV EFKT+EE  R+L+RAK +GALVVVDF+R SCGSCKYIEQGF KLC
Sbjct: 72  VEEEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLC 131

Query: 176 KGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERIL 235
           KGSGD  + V+FLKHNVIDEYDEQSEVA+RLRIK VPLFHFYK+GVLLEAF TRDKERI+
Sbjct: 132 KGSGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERII 191

Query: 236 AAISKYSS 244
           AAI KY++
Sbjct: 192 AAIQKYTA 199

[Close]

BLAST of Spg025368 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.6e-10
Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 134 TDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVI 193
           T E++   L  A ES  L+V+DF  T C  C++I   FA L K    +   V+F K +V 
Sbjct: 12  TVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAK----KHLDVVFFKVDV- 71

Query: 194 DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYSSI 245
              DE + VAE  +++ +P F F K+G + E      KE I+A + K+ ++
Sbjct: 72  ---DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114

[Close]

BLAST of Spg025368 vs. ExPASy Swiss-Prot
Match: P10639 (Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3)

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-09
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 129 VREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFL 188
           V+  ++ E F   L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 189 KHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYS 243
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++ A+I++Y+
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEYA 105

[Close]

BLAST of Spg025368 vs. ExPASy Swiss-Prot
Match: P11232 (Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 6.4e-09
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 129 VREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFL 188
           V+  ++ E F   L  A +   LVVVDF  T CG CK I+  F  LC    D+ + V+FL
Sbjct: 2   VKLIESKEAFQEALAAAGDK--LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFL 61

Query: 189 KHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYS 243
           + +V    D+  +VA    +K +P F FYK G  +  F   +KE++ A I++++
Sbjct: 62  EVDV----DDCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEATITEFA 105

[Close]

BLAST of Spg025368 vs. ExPASy TrEMBL
Match: A0A6J1GH82 (thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.7e-109
Identity = 205/248 (82.66%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MVESCHFLVRSCSSALLPAQSSFTKQDPNRNCGYIYVAMQRQNQTALQCKALFSFGLNPN 60
           MVESCHFLVRSCSSALLPAQS   +         +YVAMQRQNQ  L+CKAL S G    
Sbjct: 1   MVESCHFLVRSCSSALLPAQSFPIEVHSLNKTQILYVAMQRQNQNVLKCKALLSVG---- 60

Query: 61  EELESR-IPISIPFWLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKIRVAAGNQGELSDE 120
            +LESR IPISIPFWL E  HVRLSITRPE PP L+IRH  +FKSK RVAAGNQG LSDE
Sbjct: 61  -KLESRIIPISIPFWLSENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQGGLSDE 120

Query: 121 DDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSG 180
           DDDLCPV+CVREFKTDEEFIRIL+RAKESGALVVVDFYRTSCGSCKYIEQGFAKLC+GSG
Sbjct: 121 DDDLCPVECVREFKTDEEFIRILERAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGSG 180

Query: 181 DQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAIS 240
           DQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAI+
Sbjct: 181 DQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAIT 240

Query: 241 KYSSIALQ 248
           KYSS ALQ
Sbjct: 241 KYSSTALQ 243

[Close]

BLAST of Spg025368 vs. ExPASy TrEMBL
Match: A0A6J1KM94 (thioredoxin-like 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495910 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.1e-95
Identity = 179/210 (85.24%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 39  MQRQNQTALQCKALFSFGLNPNEELESR-IPISIPFWLPEKEHVRLSITRPEVPPCLNIR 98
           MQRQNQ  L+CKAL SFG +     ESR IPISIPFWL E  HVRLSI RPE PP L+IR
Sbjct: 1   MQRQNQNVLKCKALPSFGKH-----ESRIIPISIPFWLSENPHVRLSIIRPEAPPYLSIR 60

Query: 99  HGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFY 158
           H  +FKSK RVAAGNQG LSDEDDDLCPV+CVREFKTDEEFIRIL+RAK+SGALVVVDFY
Sbjct: 61  HELMFKSKPRVAAGNQGGLSDEDDDLCPVECVREFKTDEEFIRILERAKKSGALVVVDFY 120

Query: 159 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFY 218
           RTSCGSCKYIEQGFAKLC+GSGDQEAPVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFY
Sbjct: 121 RTSCGSCKYIEQGFAKLCRGSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKTVPLFHFY 180

Query: 219 KDGVLLEAFPTRDKERILAAISKYSSIALQ 248
           KDGVLLEAFPTRDKERILAAI+KYSS ALQ
Sbjct: 181 KDGVLLEAFPTRDKERILAAITKYSSTALQ 205

[Close]

BLAST of Spg025368 vs. ExPASy TrEMBL
Match: A0A6J1CRI9 (thioredoxin-like 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013927 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.9e-95
Identity = 174/201 (86.57%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 47  LQCKALFSFGLNPNEELESRIPISIPFWLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKI 106
           + C ALFS GLNPNEELESRIPISIP    EK HVRLSI+RP++P  LNIRH FLF+S+I
Sbjct: 53  MYCSALFSSGLNPNEELESRIPISIPSRSFEKGHVRLSISRPQLPSSLNIRHQFLFESRI 112

Query: 107 RVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKY 166
           RVAAG+QG LSDEDDDLCPVDCVREFKTDE+F++ILDRAKE+GALVVVDFYRTSCGSCKY
Sbjct: 113 RVAAGSQGGLSDEDDDLCPVDCVREFKTDEDFLKILDRAKETGALVVVDFYRTSCGSCKY 172

Query: 167 IEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAF 226
           IEQGFAKLCKGSGD+E PVIFLKHNVIDEYDEQSEVAERLRI+TVPLFHFYKDGVLLEAF
Sbjct: 173 IEQGFAKLCKGSGDEETPVIFLKHNVIDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAF 232

Query: 227 PTRDKERILAAISKYSSIALQ 248
           PTRDKERILAAISKYSS ALQ
Sbjct: 233 PTRDKERILAAISKYSSSALQ 253

[Close]

BLAST of Spg025368 vs. ExPASy TrEMBL
Match: A0A0A0LP39 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.8e-94
Identity = 177/210 (84.29%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 39  MQRQNQTALQCKALFSFGLNPNEELESRIPISIPFWL-PEKEHVRLSITRPEVPPCLNIR 98
           MQRQNQ  LQCK L SFGLNPNE++E RIPI IP WL  EKE VRLSITRPEVP     R
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVP-----R 60

Query: 99  HGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFY 158
           +  L+KSK+RV AGNQGELSDEDDDLCPVDCVREFKTDEEFI+ILD+AKE+G LVVVDFY
Sbjct: 61  NQLLYKSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFY 120

Query: 159 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFY 218
           RTSCGSCKYIEQGFAKLCKGSGDQ+APVIFLKHNV+DEYDEQSEVAERLRIKTVPLFHFY
Sbjct: 121 RTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFY 180

Query: 219 KDGVLLEAFPTRDKERILAAISKYSSIALQ 248
           KDGVLLEAFPTRDKERIL AI+KYSS  LQ
Sbjct: 181 KDGVLLEAFPTRDKERILTAITKYSSSPLQ 205

[Close]

BLAST of Spg025368 vs. ExPASy TrEMBL
Match: A0A1S3BBI1 (thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.3e-94
Identity = 176/210 (83.81%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 39  MQRQNQTALQCKALFSFGLNPNEELESRIPISIPFWL-PEKEHVRLSITRPEVPPCLNIR 98
           MQRQNQ  LQCK L SFGL+PNE+LESRIPI IP WL  EKE VRLSITRPEVP     R
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVP-----R 60

Query: 99  HGFLFKSKIRVAAGNQGELSDEDDDLCPVDCVREFKTDEEFIRILDRAKESGALVVVDFY 158
           H  L+KSK+RV AGNQGE+ DEDDDLCPVDCVREFKTDEEFI+ILD+AKE+G LVVVDFY
Sbjct: 61  HQLLYKSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFY 120

Query: 159 RTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLRIKTVPLFHFY 218
           RTSCGSCKYIEQGFAKLCKGSGDQ+APVIFLKHNV+DEYDEQSEVAERLRIK+VPLFHFY
Sbjct: 121 RTSCGSCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFY 180

Query: 219 KDGVLLEAFPTRDKERILAAISKYSSIALQ 248
           KDGVLLEAFPTRDKERIL AI+KYSS  LQ
Sbjct: 181 KDGVLLEAFPTRDKERILTAITKYSSSPLQ 205

[Close]

BLAST of Spg025368 vs. TAIR 10
Match: AT1G07700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-61
Identity = 116/172 (67.44%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 74  WLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKI--RVAAGNQGELSDEDDDLCPVDCVRE 133
           W+     VRLS  R E    +NI  G   +  I   ++  N  ELSDE+DDLCPV+CV E
Sbjct: 32  WVWHNNGVRLSFPRAE--SSINITMGCTLQRGIAKSLSQENLVELSDENDDLCPVECVTE 91

Query: 134 FKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHN 193
           FKTD+E + +L+++KE+ +LVVVDFYRT+CGSCKYIEQGF+KLCK SGDQEAPVIFLKHN
Sbjct: 92  FKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHN 151

Query: 194 VIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYSS 244
           V+DEYDEQSEVAERLRIK VPLFHFYK+GVLLE+F TRDKERI AAI KY+S
Sbjct: 152 VVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKYTS 201

[Close]

BLAST of Spg025368 vs. TAIR 10
Match: AT1G07700.3 (Thioredoxin superfamily protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-61
Identity = 116/172 (67.44%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 74  WLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKI--RVAAGNQGELSDEDDDLCPVDCVRE 133
           W+     VRLS  R E    +NI  G   +  I   ++  N  ELSDE+DDLCPV+CV E
Sbjct: 45  WVWHNNGVRLSFPRAE--SSINITMGCTLQRGIAKSLSQENLVELSDENDDLCPVECVTE 104

Query: 134 FKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHN 193
           FKTD+E + +L+++KE+ +LVVVDFYRT+CGSCKYIEQGF+KLCK SGDQEAPVIFLKHN
Sbjct: 105 FKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHN 164

Query: 194 VIDEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYSS 244
           V+DEYDEQSEVAERLRIK VPLFHFYK+GVLLE+F TRDKERI AAI KY+S
Sbjct: 165 VVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDKERIDAAILKYTS 214

[Close]

BLAST of Spg025368 vs. TAIR 10
Match: AT1G07700.2 (Thioredoxin superfamily protein )

HSP 1 Score: 184.9 bits (468), Expect = 8.0e-47
Identity = 91/142 (64.08%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 74  WLPEKEHVRLSITRPEVPPCLNIRHGFLFKSKI--RVAAGNQGELSDEDDDLCPVDCVRE 133
           W+     VRLS  R E    +NI  G   +  I   ++  N  ELSDE+DDLCPV+CV E
Sbjct: 32  WVWHNNGVRLSFPRAE--SSINITMGCTLQRGIAKSLSQENLVELSDENDDLCPVECVTE 91

Query: 134 FKTDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHN 193
           FKTD+E + +L+++KE+ +LVVVDFYRT+CGSCKYIEQGF+KLCK SGDQEAPVIFLKHN
Sbjct: 92  FKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHN 151

Query: 194 VIDEYDEQSEVAERLRIKTVPL 214
           V+DEYDEQSEVAERLRIK +PL
Sbjct: 152 VVDEYDEQSEVAERLRIKVIPL 171

[Close]

BLAST of Spg025368 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-11
Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 0


Query: 134 TDEEFIRILDRAKESGALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVI 193
           T E++   L  A ES  L+V+DF  T C  C++I   FA L K    +   V+F K +V 
Sbjct: 12  TVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAK----KHLDVVFFKVDV- 71

Query: 194 DEYDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAISKYSSI 245
              DE + VAE  +++ +P F F K+G + E      KE I+A + K+ ++
Sbjct: 72  ---DELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114

[Close]

BLAST of Spg025368 vs. TAIR 10
Match: AT4G26160.1 (atypical CYS HIS rich thioredoxin 1 )

HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 140 RILDRAKESG-ALVVVDFYRTSCGSCKYIEQGFAKLCKGSGDQEAPVIFLKHNVIDEYDE 199
           + L+  K++G  LV+VDFY T CGSC+ +   F KLCK +  +   ++FLK N    +DE
Sbjct: 103 QFLNALKDAGDRLVIVDFYGTWCGSCRAM---FPKLCK-TAKEHPNILFLKVN----FDE 162

Query: 200 QSEVAERLRIKTVPLFHFYK 219
              + + L +K +P FHFY+
Sbjct: 163 NKSLCKSLNVKVLPYFHFYR 174

The following BLAST results are available for this feature:

BLAST of Spg025368 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951253.1	2.0e-108	82.66	thioredoxin-like 4, chloroplastic [Cucurbita moschata] >KAG6585666.1 Thioredoxin...	[more]
XP_023537391.1	3.4e-108	82.66	thioredoxin-like 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023522900.1	1.3e-96	86.67	thioredoxin-like 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038886222.1	2.3e-96	86.67	thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxi...	[more]
XP_023001835.1	1.3e-94	85.24	thioredoxin-like 4, chloroplastic [Cucurbita maxima]	[more]

BLAST of Spg025368 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5C5	4.7e-60	67.44	Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 P...	[more]
Q6YTI3	1.9e-53	75.00	Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]
Q42403	7.6e-10	34.23	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]
P10639	1.7e-09	35.96	Thioredoxin OS=Mus musculus OX=10090 GN=Txn PE=1 SV=3	[more]
P11232	6.4e-09	35.09	Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2	[more]

BLAST of Spg025368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GH82	9.7e-109	82.66	thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 ...	[more]
A0A6J1KM94	6.1e-95	85.24	thioredoxin-like 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495910 PE...	[more]
A0A6J1CRI9	7.9e-95	86.57	thioredoxin-like 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013927...	[more]
A0A0A0LP39	1.8e-94	84.29	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300...	[more]
A0A1S3BBI1	2.3e-94	83.81	thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 S...	[more]

BLAST of Spg025368 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07700.1	3.3e-61	67.44	Thioredoxin superfamily protein	[more]
AT1G07700.3	3.3e-61	67.44	Thioredoxin superfamily protein	[more]
AT1G07700.2	8.0e-47	64.08	Thioredoxin superfamily protein	[more]
AT5G42980.1	5.4e-11	34.23	thioredoxin 3	[more]
AT4G26160.1	2.3e-09	40.00	atypical CYS HIS rich thioredoxin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 113..244 e-value: 9.2E-19 score: 69.4
None	No IPR available	CDD	cd02947	TRX_family	coord: 142..238 e-value: 1.19884E-17 score: 73.7464
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 134..238 e-value: 8.5E-11 score: 41.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 104..243 score: 9.947084
IPR044176	Thioredoxin-like 4, chloroplastic	PANTHER	PTHR47912	THIOREDOXIN-LIKE 4, CHLOROPLASTIC	coord: 105..245
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 115..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025368.1	Spg025368.1	mRNA