Spg025331 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025331
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	polyadenylate-binding protein RBP47-like
Location	scaffold13: 39331122 .. 39335575 (-)
RNA-Seq Expression	Spg025331
Synteny	Spg025331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGAACTTAACGACAGCACGTAGAATATAAATTATTAATAAAAATCAACGGCTGAGATCGATTCAGAGGGTTTGATCTAAGGGTTCGAGCAGCCACCGCGTCTACAAATCCAGACATGAATCGGTCGTTCATTGATTTGCATTTGTTTTCGGCTGTTCCACCCTAATTGAGCCTCCTCTCTCATTCCTTTCTCTCTCGTTTATCTCCTCCTCCTTCAGCTTGCGGTTATCAACAACTATCTCACCATGGATTTCATCTCTCACTATTTCTGAGACTTCGATTCATAAGCCCTATTCGTGTTCGCCTCTCTACTCATTCCTCTTCTTATTCTTTCTGCCAATTTGAATCTGTAATTTTGTTTGCCCTTTCAATTTTGAGCGGTACAGAAAGAGTCTGAGAAGATGCCATCGAACGGCCCTGATTCGCAGCCACAGCAGCAGGCGGCGCATCAGACAGAGCAGAATCAGCAACCGCACAAACAGCCCCCGCAGCAGCCACCGCCGCAGCGGTGGATGGCGATGCAGTATCCGGCGGCGGCGATGATAATGCAGCATCCTATGATGCCGCCGCAGCATTACGTGCCTCCGCCTTCTCCCCACTATATTCCATACCGTCAATACCCGCCGCCGCATCAGCTTAACGGCCCGCAGCACCAGCAGCCACACCAAGGATCCACCAGCGAGAACAAGACGGTTTGGGTCGGCGATTTGCAGCATTGGATGGACGAGAATTACCTCCATAGCTGCTTCGCTTCCACCGGCGAGGTTTCCAATTTTACTATTTCGATTTCTGTTTTTTATATTAGAATATTAATGTATAAATAGCTGTTTTACTATTATCTACATGTTTTGGATTTGTTTGGCTAATTTTGTTAACTGTCACTGGTGTCATTTAACTTGCTCAATATAGATAAGAAATTTTTTGATGAAACAACTATTGGTTGTCAACAGCAAAATTGTCAGCTTTTTATTTTTAAATACTATGTCTGTAAGTCATTGTTTTTGTAGTCAGTCTTACAGGTTTACTATTTTTGTTACTTGAGACTGCTTGAAGAAAATTGTAAAAATCTTACTTGGATCTGTTGTTATTATCAGATTAGATTCTTCATTTAATTCTAGAGCATTTATCATCACTAGGGGCCAAATTTTTTTAGTCAATGCACCCGTTTGTTTTACTTTGCATTCCTAAAATGATATTTTATGCTATACGTGTTATGTTTTCCTCAATTGTTACGTTCCAATTTCTTTGTTATTAAATGAAACAAGGTGTGTAAACTTTATTATTTTCCTTTTAGTCTCATTATCTCATCTTGTTTAGATATTTTAGGAAAAAGAAAGTCAAGCAGTGTAGCAACCTAAGAGCATAAGATTATCTGGATATGTTTGAGGCGTGTAGTCCCATTTTAAATTCCTATATCATCAAACATCAACACTTAACTAATTTCATTGAAGTGAAAGATGAAATATTCTGATTTAGCTCTCTTATATTTTATTTTGATTTTGTGATTCCAACAAACAATATATGGGTTATTATGCACATTTCACGTATGTTTAGTCATGATTTGTAAATGGAAGTATTTTGACATTTCATCCTTCAATAAAGTAAGATACGGTACCAACCAAGTTGTTATTGCGGTCCTTGTTCTCTTGTGTGTTTCTTGTATCTTTTATATTTTGCATATTCCTTGTTTGTTGATTTGTTTCATTTCTTAGAAGAGAATCTATCAAAAGGAAGCCTCTAGGAGACTATTTGTTCGTTGTCTTTTGTTCTTTTTCTTGACAGTCTTTGTTATCTCATCTTTAAGCACATTTCTTATGTCCCATGCTTTACGTAACTATTACATGCAGATTTCTTCCATTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCATACAACAGCAGAGAAAGTTCTGCAGAACTATTCTACAATTTTGATGCCTAATACTGAGCAAACTTTCCGGCTAAACTGGGCAACATTTAGCACTGGTGACAAGCGTTCAGAAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCAGATGTTACTGATAGTATACTGCATGAAACTTTTGCTAGTAAATACTCATCTGTCAAAGCAGCTAAAGTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTGAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCGTGTATTGCTCAAGTAGGCCTATGCGTATTGGTGCAGCGACACCCAAAAAATCCTCTGGATATCAGCAGCAATATTCTTCACAAGGTACGTTATACTTTGTTTGTTGTGATTATTAGCTCATAAACAAACACATATTGCATCCATTTGCTCAGTTTTGAGTCAATATTTAATCATGTCCTTAAAAAGGGCATTTGAGGGCATTGAAATGTCACATATAGGTAAGATTTCTGTGTAATTGTATAAGGAGACCACGACTAACCCTTAGCAAATTAAGCTGCTCATACATCAGCTGTAATTTTATATTGTCTTGGTATTAGGATATGCATCAAATGGTTCATTCACCCATGGACACCAGTCTGATGGAGATTCTACAAATACAACAGTGAGTTGGGTTGATTCATTTTGTCTTCATAATATCAAGTGTTATTTCCCTTGCTAATCCTCTCTCCTTTTTCTCTTCGTCCTGTTTTTGGTGGATGTGTAAAAAGATTTTCATTGGAGGGCTTGATCCCAATGTTACTGATGACGATCTTAGGCAGCTCTTTTCTCAGCATGGTGACATAGTATCTGTTAAGATACCAGTTGGAAAAGGTTGTGGTTTTATTCAATTTGCAAACAGGTAATTTTCATGGCCTTGAGTTGTTTGACCATATACTAGCCTTTTTAGTTTCTTTGTCTATTTGAATTACTCAAGTATCCTCTTGAATTCTGCTGTGTAGAAAGAATGCTGAAGAGGCATTGCAGAAATTAAATGGAACTGTGATTGGCAAGCAAACAGTACGTCTTTCTTGGGGACGAAGTCCGGCAATTAAGCAGGTAATTTTCTTTTGTGTGTATGAAAATGGTAGAGATATAAGTACTTCATTTTCCGATGGCTTTTGGAATAGCTATTTCTTCTTTTTTTTTTTTGCAAAACGAGCCTACCATCTTCTTGAGAGTGCACTCTTCTTACTTACATGGCAAATGGCAAATCTATCATTCCTTTTTATATTGTCTGTCTAAGGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTAGAAAAAAAAAAATCATTTAAAAAAAAATTCTGGTGTTTGGCCACCACTGAAAATGACTCATTAAAAAATGAGATTGAGAAATAAACCATTTTGAGAGAAACACTTGAAAGCAACTTTTTTGAAAAGAGTTTATCAGTATATAATAACTTGTGTATAAAAACACTTATGAAGAAATGTAACCAAACATATGAGTGTTTAAATTCTAAACAATTTATGTACAAAATGTTTAAAATAAAATGCATTCTTGAAAAACATTTAAATTAAAAGGTATTCCAAATGGACCCCATGTGTCTTGTCTTTCCTAATGTAAATTTAACTACAGCTATTGTGCACTATGTAATCTGAAGGAACAACTGGAAACATCCCTACGAAATTATAATACCAGGATTTACTAAATAACCCACATAAAATATTATTACATTCAGAGATACAAAAAGGATGAAGGAAATGGAAGGAAACATGCTTAGAACTTTCTTGGTGTTGATTTGATTGAGTGAATAGGTGTCTGGATTTAGTTGCTTCAAATTACTTGAAACGTTGGTATACTAGCAGATTAGATTTCTGTCTCTATTGTCAATTATCTTAACAAGTACTTATTGACAGTACCGGGCTGATTATAACAATCACTGGAGTGGAGCCTACTATGGAGGGCAGGTCTATGGTGGATATGGATATGCACTGCCGCTACCTTACGACCCACCAACCATGTATGCTACAGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGATTTGGAAGGCAGAGGAAACAGTCTTTAGTTCTAATACGAGGCAATTGTCCCGCCGGAAGCCTGGGGTGGGCAAATCTTCTACGTTTCTCTGTAGGATCTCACTATCTATAATGGGCAAAGTTGCTTCATTTCTGAAGGTTCAACTTTGTTCTAGAGGTTTTCTATAAATCCCTCCATCCGTGGAGCGGAACCGAATTTTGATGGACCGGGTTATGTAGAATATGATTTACTAACTATTCGTTTGAGACTGCGAGAACTAATAAGGAACTTAAATGTTTATTAGAATATATAATGTTATGGCTTGTAGCTTTAGCTAATATTATTCTGCACGTGCTCAAAATTAGCATGAATTTGAAGCTACCATAGTTAAGATTTCTGATTGCTGTTCTGTCCTTGTCC

mRNA sequence

ATGTCCCATGCTTTACGTAACTATTACATGCAGATTTCTTCCATTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCATACAACAGCAGAGAAAGTTCTGCAGAACTATTCTACAATTTTGATGCCTAATACTGAGCAAACTTTCCGGCTAAACTGGGCAACATTTAGCACTGGTGACAAGCGTTCAGAAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCAGATGTTACTGATAGTATACTGCATGAAACTTTTGCTAGTAAATACTCATCTGTCAAAGCAGCTAAAGTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTGAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCGTGTATTGCTCAAGTAGGCCTATGCGTATTGGTGCAGCGACACCCAAAAAATCCTCTGGATATCAGCAGCAATATTCTTCACAAGGATATGCATCAAATGGTTCATTCACCCATGGACACCAGTCTGATGGAGATTCTACAAATACAACAAATGCTGAAGAGGCATTGCAGAAATTAAATGGAACTGTGATTGGCAAGCAAACAGTACGTCTTTCTTGGGGACGAAGTCCGGCAATTAAGCAGTACCGGGCTGATTATAACAATCACTGGAGTGGAGCCTACTATGGAGGGCAGGTCTATGGTGGATATGGATATGCACTGCCGCTACCTTACGACCCACCAACCATGTATGCTACAGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA

Coding sequence (CDS)

ATGTCCCATGCTTTACGTAACTATTACATGCAGATTTCTTCCATTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCATACAACAGCAGAGAAAGTTCTGCAGAACTATTCTACAATTTTGATGCCTAATACTGAGCAAACTTTCCGGCTAAACTGGGCAACATTTAGCACTGGTGACAAGCGTTCAGAAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCAGATGTTACTGATAGTATACTGCATGAAACTTTTGCTAGTAAATACTCATCTGTCAAAGCAGCTAAAGTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTGAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCGTGTATTGCTCAAGTAGGCCTATGCGTATTGGTGCAGCGACACCCAAAAAATCCTCTGGATATCAGCAGCAATATTCTTCACAAGGATATGCATCAAATGGTTCATTCACCCATGGACACCAGTCTGATGGAGATTCTACAAATACAACAAATGCTGAAGAGGCATTGCAGAAATTAAATGGAACTGTGATTGGCAAGCAAACAGTACGTCTTTCTTGGGGACGAAGTCCGGCAATTAAGCAGTACCGGGCTGATTATAACAATCACTGGAGTGGAGCCTACTATGGAGGGCAGGTCTATGGTGGATATGGATATGCACTGCCGCTACCTTACGACCCACCAACCATGTATGCTACAGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA

Protein sequence

MSHALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTTNAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAYGAYPMYGTHQQQVN

Homology

[Close]

BLAST of Spg025331 vs. NCBI nr
Match: XP_022144139.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 506.5 bits (1303), Expect = 1.4e-139
Identity = 259/314 (82.48%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD
Sbjct: 121 EISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 180

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKY SVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 181 KRSENGSDLSIFVGDLAADVTDSLLHETFASKYPSVKAAKVVYDPNTGCSKGYGFVRFGD 240

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAM EMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST
Sbjct: 241 DNERSQAMAEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 300

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNG 
Sbjct: 301 NTTIFIGGLDPNVTDEDLRQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGA 360

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSPA KQYRADYNNHW+G YYGGQVYGGYGYALPLPYDPPTMYA AAY
Sbjct: 361 VIGKQTVRLSWGRSPANKQYRADYNNHWNGTYYGGQVYGGYGYALPLPYDPPTMYAAAAY 420

[Close]

BLAST of Spg025331 vs. NCBI nr
Match: XP_008444645.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo] >KAA0060870.1 polyadenylate-binding protein RBP47-like [Cucumis melo var. makuwa])

HSP 1 Score: 497.3 bits (1279), Expect = 8.7e-137
Identity = 256/314 (81.53%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGD
Sbjct: 117 EISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 176

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 177 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 236

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD T
Sbjct: 237 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 296

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 297 NTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 356

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Sbjct: 357 VIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYA-AAY 416

[Close]

BLAST of Spg025331 vs. NCBI nr
Match: XP_004152729.1 (polyadenylate-binding protein RBP47 [Cucumis sativus] >KGN62542.1 hypothetical protein Csa_022317 [Cucumis sativus])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 256/314 (81.53%), Postives = 262/314 (83.44%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGD
Sbjct: 117 EISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 176

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 177 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 236

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD T
Sbjct: 237 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 296

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 297 NTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 356

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSP  KQYR DY NHWSGAYYGGQVYGGYGYALPLPYDPPTMYA AAY
Sbjct: 357 VIGKQTVRLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMYA-AAY 416

[Close]

BLAST of Spg025331 vs. NCBI nr
Match: XP_038885237.1 (polyadenylate-binding protein RBP47-like [Benincasa hispida])

HSP 1 Score: 495.0 bits (1273), Expect = 4.3e-136
Identity = 255/314 (81.21%), Postives = 262/314 (83.44%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGD
Sbjct: 119 EISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 178

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 179 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 238

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD T
Sbjct: 239 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 298

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNG 
Sbjct: 299 NTTIFIGGLDPNVTDDDLKQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGI 358

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Sbjct: 359 VIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYA-AAY 418

[Close]

BLAST of Spg025331 vs. NCBI nr
Match: XP_023002570.1 (polyadenylate-binding protein RBP47-like [Cucurbita maxima] >XP_023002571.1 polyadenylate-binding protein RBP47-like [Cucurbita maxima])

HSP 1 Score: 476.5 bits (1225), Expect = 1.6e-130
Identity = 247/315 (78.41%), Postives = 257/315 (81.59%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           ++SSIKVIRNKQTGISEGYGFVEF SHTTAEKVL NYST+LMPNTE TFRLNWAT STGD
Sbjct: 123 EVSSIKVIRNKQTGISEGYGFVEFLSHTTAEKVLHNYSTVLMPNTELTFRLNWATSSTGD 182

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSE GSDLSIFVGDLAADVTDSIL ETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 183 KRSEKGSDLSIFVGDLAADVTDSILQETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 242

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMT+MNGVYCSSRPMRIGAATPKKSSGYQ QYSSQGY SNGSFTHGHQSDGDST
Sbjct: 243 DNERSQAMTDMNGVYCSSRPMRIGAATPKKSSGYQHQYSSQGYGSNGSFTHGHQSDGDST 302

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 303 NTTIFIGGLDPNVTDDDLRQLFSQHGDIVSVKIPIGKGCGFIQFANRKNAEEALQKLNGT 362

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYATAA 280
            IGKQTVRLSWGRSPA KQ+RADY+N WSG AYYGGQ+YGGYGYA+PLPYDPPTMYA A+
Sbjct: 363 EIGKQTVRLSWGRSPANKQHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS 422

[Close]

BLAST of Spg025331 vs. ExPASy Swiss-Prot
Match: Q9SX80 (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-88
Identity = 186/315 (59.05%), Postives = 213/315 (67.62%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +I S+KVIRNK  G SEGYGFVEF SH  A+KVLQ ++   MPNT+Q FRLNWA+FSTG+
Sbjct: 130 EIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGE 189

Query: 71  KRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFG 130
           KR E NG DLSIFVGDLA DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFG
Sbjct: 190 KRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 249

Query: 131 DDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDS 190
           D+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  +G+FT   +S+GD+
Sbjct: 250 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPSGAFT---RSEGDT 309

Query: 191 TNTT---------------------------------------------NAEEALQKLNG 250
            NTT                                             NAEEAL+KLNG
Sbjct: 310 INTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNG 369

Query: 251 TVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA 280
           TVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Sbjct: 370 TVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAAP 429

[Close]

BLAST of Spg025331 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.1e-88
Identity = 187/322 (58.07%), Postives = 218/322 (67.70%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           ++ S+K+IRNKQTG SE YGFVEF +H  AEKVLQ+Y+  +MPNTEQ FRLNWA FSTG+
Sbjct: 109 EVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGE 168

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KR+E GSD SIFVGDLA+DVTD++L +TFAS+Y S+K AKVV D NTG SKGYGFVRFGD
Sbjct: 169 KRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGD 228

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQ 190
           ++ERS+AMTEMNGVYCSSR MRIG ATPKK S + +QYSSQ      GYASNG+ THG Q
Sbjct: 229 ESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAH-EQYSSQAVILSGGYASNGAATHGSQ 288

Query: 191 SDGDSTNTT---------------------------------------------NAEEAL 250
           SDGDS+NTT                                             +A+EA+
Sbjct: 289 SDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAI 348

Query: 251 QKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTM 280
           QKL+G +IGKQ VRLSWGRSPA KQ R D  + W+G Y G Q YGGYGY      D   M
Sbjct: 349 QKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQD-SGM 408

[Close]

BLAST of Spg025331 vs. ExPASy Swiss-Prot
Match: Q9SX79 (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.3e-87
Identity = 183/315 (58.10%), Postives = 211/315 (66.98%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +I S+KVIRNK  G+SEGYGFVEF SH  A+KVL+ ++   MPNT+Q FRLNWA+FSTG+
Sbjct: 128 EIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGE 187

Query: 71  KRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFG 130
           KR E NG DLSIFVGDL+ DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFG
Sbjct: 188 KRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 247

Query: 131 DDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDS 190
           D+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  NG+ T   + +GD 
Sbjct: 248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPNGTLT---RPEGDI 307

Query: 191 TNTT---------------------------------------------NAEEALQKLNG 250
            NTT                                             NAEEAL+KLNG
Sbjct: 308 MNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNG 367

Query: 251 TVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA 280
           TVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Sbjct: 368 TVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAAP 427

[Close]

BLAST of Spg025331 vs. ExPASy Swiss-Prot
Match: Q0WW84 (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 8.9e-76
Identity = 161/300 (53.67%), Postives = 198/300 (66.00%), Query Frame = 0


Query: 3   HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLN 62
           H+  ++  ++SS+KVIRNK T  SEGYGFVEF S   AE+VLQNYS  +MPN++Q FR+N
Sbjct: 125 HSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRIN 184

Query: 63  WATFSTGDKRS-ENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSK 122
           WA+FSTG+KR+ ENG DLS+FVGDL+ DVTD +LHETF+ +Y SVK+AKVV D NTG SK
Sbjct: 185 WASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 244

Query: 123 GYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYAS 182
           GYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATPK++   QQQ+SSQ      G+ S
Sbjct: 245 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGS 304

Query: 183 NGSFTHGHQSDGDSTNTT------------------------------------------ 242
           NGS  +G QSDG+STN T                                          
Sbjct: 305 NGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFA 364

Query: 243 ---NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVY-GGYGYA 250
              +AE+A++ LNGTVIGK TVRLSWGRSP  KQ+R D    W+G Y  G  Y  G GYA
Sbjct: 365 DRKSAEDAIESLNGTVIGKNTVRLSWGRSPN-KQWRGDSGQQWNGGYSRGHGYNNGGGYA 423

[Close]

BLAST of Spg025331 vs. ExPASy Swiss-Prot
Match: F4I3B3 (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.4e-74
Identity = 165/309 (53.40%), Postives = 197/309 (63.75%), Query Frame = 0


Query: 3   HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLN 62
           H   ++  ++SS+KVIRNKQT  SEGYGFVEF S + AE+ LQ++S + MPN EQ FRLN
Sbjct: 136 HTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLN 195

Query: 63  WATFSTGDKR-SENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSK 122
           WA+FSTG+KR SENG DLSIFVGDLA DV+D++L ETFA +Y SVK AKVV D NTG SK
Sbjct: 196 WASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSK 255

Query: 123 GYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFT 182
           GYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ Y QQ  SQ    + G   
Sbjct: 256 GYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG 315

Query: 183 HGHQSDGDSTNTT---------------------------------------------NA 242
           +G  SDG+S N+T                                             +A
Sbjct: 316 NGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSA 375

Query: 243 EEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYD 265
           EEA+  LNGTVIGK TVRLSWGRSP  KQ+R+D  N W+G Y  GQ Y   GYA      
Sbjct: 376 EEAIGNLNGTVIGKNTVRLSWGRSPN-KQWRSDSGNQWNGGYSRGQGYNN-GYA----NQ 435

[Close]

BLAST of Spg025331 vs. ExPASy TrEMBL
Match: A0A6J1CRE8 (polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC111013897 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.0e-140
Identity = 259/314 (82.48%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD
Sbjct: 121 EISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 180

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKY SVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 181 KRSENGSDLSIFVGDLAADVTDSLLHETFASKYPSVKAAKVVYDPNTGCSKGYGFVRFGD 240

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAM EMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST
Sbjct: 241 DNERSQAMAEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 300

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNG 
Sbjct: 301 NTTIFIGGLDPNVTDEDLRQLFSQHGDIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGA 360

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSPA KQYRADYNNHW+G YYGGQVYGGYGYALPLPYDPPTMYA AAY
Sbjct: 361 VIGKQTVRLSWGRSPANKQYRADYNNHWNGTYYGGQVYGGYGYALPLPYDPPTMYAAAAY 420

[Close]

BLAST of Spg025331 vs. ExPASy TrEMBL
Match: A0A5A7V0L8 (Polyadenylate-binding protein RBP47-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00020 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.2e-137
Identity = 256/314 (81.53%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGD
Sbjct: 117 EISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 176

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 177 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 236

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD T
Sbjct: 237 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 296

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 297 NTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 356

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Sbjct: 357 VIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYA-AAY 416

[Close]

BLAST of Spg025331 vs. ExPASy TrEMBL
Match: A0A1S3BBK1 (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103487914 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.2e-137
Identity = 256/314 (81.53%), Postives = 263/314 (83.76%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGD
Sbjct: 117 EISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 176

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 177 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 236

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD T
Sbjct: 237 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 296

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 297 NTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 356

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Sbjct: 357 VIGKQTVRLSWGRSPTNKQYRADYGNHWSGAYYGGQMYGGYGYALPLPYDPPTMYA-AAY 416

[Close]

BLAST of Spg025331 vs. ExPASy TrEMBL
Match: A0A0A0LP64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360590 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.5e-137
Identity = 256/314 (81.53%), Postives = 262/314 (83.44%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGD
Sbjct: 117 EISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILMPNTEQAFRLNWATFSTGD 176

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 177 KRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 236

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD T
Sbjct: 237 DNERSQAMTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFSHGHQSDGDFT 296

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 297 NTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGT 356

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY 280
           VIGKQTVRLSWGRSP  KQYR DY NHWSGAYYGGQVYGGYGYALPLPYDPPTMYA AAY
Sbjct: 357 VIGKQTVRLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMYA-AAY 416

[Close]

BLAST of Spg025331 vs. ExPASy TrEMBL
Match: A0A6J1KPB2 (polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC111496391 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.7e-131
Identity = 247/315 (78.41%), Postives = 257/315 (81.59%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           ++SSIKVIRNKQTGISEGYGFVEF SHTTAEKVL NYST+LMPNTE TFRLNWAT STGD
Sbjct: 123 EVSSIKVIRNKQTGISEGYGFVEFLSHTTAEKVLHNYSTVLMPNTELTFRLNWATSSTGD 182

Query: 71  KRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 130
           KRSE GSDLSIFVGDLAADVTDSIL ETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD
Sbjct: 183 KRSEKGSDLSIFVGDLAADVTDSILQETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFGD 242

Query: 131 DNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDST 190
           DNERSQAMT+MNGVYCSSRPMRIGAATPKKSSGYQ QYSSQGY SNGSFTHGHQSDGDST
Sbjct: 243 DNERSQAMTDMNGVYCSSRPMRIGAATPKKSSGYQHQYSSQGYGSNGSFTHGHQSDGDST 302

Query: 191 NTT---------------------------------------------NAEEALQKLNGT 250
           NTT                                             NAEEALQKLNGT
Sbjct: 303 NTTIFIGGLDPNVTDDDLRQLFSQHGDIVSVKIPIGKGCGFIQFANRKNAEEALQKLNGT 362

Query: 251 VIGKQTVRLSWGRSPAIKQYRADYNNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYATAA 280
            IGKQTVRLSWGRSPA KQ+RADY+N WSG AYYGGQ+YGGYGYA+PLPYDPPTMYA A+
Sbjct: 363 EIGKQTVRLSWGRSPANKQHRADYSNQWSGAAYYGGQMYGGYGYAMPLPYDPPTMYAAAS 422

[Close]

BLAST of Spg025331 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 327.8 bits (839), Expect = 8.5e-90
Identity = 186/315 (59.05%), Postives = 213/315 (67.62%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +I S+KVIRNK  G SEGYGFVEF SH  A+KVLQ ++   MPNT+Q FRLNWA+FSTG+
Sbjct: 130 EIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGE 189

Query: 71  KRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFG 130
           KR E NG DLSIFVGDLA DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFG
Sbjct: 190 KRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 249

Query: 131 DDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDS 190
           D+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  +G+FT   +S+GD+
Sbjct: 250 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPSGAFT---RSEGDT 309

Query: 191 TNTT---------------------------------------------NAEEALQKLNG 250
            NTT                                             NAEEAL+KLNG
Sbjct: 310 INTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNG 369

Query: 251 TVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA 280
           TVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Sbjct: 370 TVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAAP 429

[Close]

BLAST of Spg025331 vs. TAIR 10
Match: AT1G47490.1 (RNA-binding protein 47C )

HSP 1 Score: 324.3 bits (830), Expect = 9.4e-89
Identity = 183/315 (58.10%), Postives = 211/315 (66.98%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +I S+KVIRNK  G+SEGYGFVEF SH  A+KVL+ ++   MPNT+Q FRLNWA+FSTG+
Sbjct: 128 EIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGE 187

Query: 71  KRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFG 130
           KR E NG DLSIFVGDL+ DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFG
Sbjct: 188 KRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 247

Query: 131 DDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDS 190
           D+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  NG+ T   + +GD 
Sbjct: 248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPNGTLT---RPEGDI 307

Query: 191 TNTT---------------------------------------------NAEEALQKLNG 250
            NTT                                             NAEEAL+KLNG
Sbjct: 308 MNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNG 367

Query: 251 TVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA 280
           TVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Sbjct: 368 TVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP--DPRMYPAAP 427

[Close]

BLAST of Spg025331 vs. TAIR 10
Match: AT3G19130.1 (RNA-binding protein 47B )

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-77
Identity = 161/300 (53.67%), Postives = 198/300 (66.00%), Query Frame = 0


Query: 3   HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLN 62
           H+  ++  ++SS+KVIRNK T  SEGYGFVEF S   AE+VLQNYS  +MPN++Q FR+N
Sbjct: 125 HSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRIN 184

Query: 63  WATFSTGDKRS-ENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSK 122
           WA+FSTG+KR+ ENG DLS+FVGDL+ DVTD +LHETF+ +Y SVK+AKVV D NTG SK
Sbjct: 185 WASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSK 244

Query: 123 GYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYAS 182
           GYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATPK++   QQQ+SSQ      G+ S
Sbjct: 245 GYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGS 304

Query: 183 NGSFTHGHQSDGDSTNTT------------------------------------------ 242
           NGS  +G QSDG+STN T                                          
Sbjct: 305 NGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFA 364

Query: 243 ---NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVY-GGYGYA 250
              +AE+A++ LNGTVIGK TVRLSWGRSP  KQ+R D    W+G Y  G  Y  G GYA
Sbjct: 365 DRKSAEDAIESLNGTVIGKNTVRLSWGRSPN-KQWRGDSGQQWNGGYSRGHGYNNGGGYA 423

[Close]

BLAST of Spg025331 vs. TAIR 10
Match: AT1G49600.1 (RNA-binding protein 47A )

HSP 1 Score: 278.9 bits (712), Expect = 4.6e-75
Identity = 165/309 (53.40%), Postives = 197/309 (63.75%), Query Frame = 0


Query: 3   HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLN 62
           H   ++  ++SS+KVIRNKQT  SEGYGFVEF S + AE+ LQ++S + MPN EQ FRLN
Sbjct: 136 HTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLN 195

Query: 63  WATFSTGDKR-SENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSK 122
           WA+FSTG+KR SENG DLSIFVGDLA DV+D++L ETFA +Y SVK AKVV D NTG SK
Sbjct: 196 WASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSK 255

Query: 123 GYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFT 182
           GYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ Y QQ  SQ    + G   
Sbjct: 256 GYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGG 315

Query: 183 HGHQSDGDSTNTT---------------------------------------------NA 242
           +G  SDG+S N+T                                             +A
Sbjct: 316 NGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSA 375

Query: 243 EEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYD 265
           EEA+  LNGTVIGK TVRLSWGRSP  KQ+R+D  N W+G Y  GQ Y   GYA      
Sbjct: 376 EEAIGNLNGTVIGKNTVRLSWGRSPN-KQWRSDSGNQWNGGYSRGQGYNN-GYA----NQ 435

[Close]

BLAST of Spg025331 vs. TAIR 10
Match: AT1G47490.2 (RNA-binding protein 47C )

HSP 1 Score: 236.1 bits (601), Expect = 3.4e-62
Identity = 124/184 (67.39%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 11  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGD 70
           +I S+KVIRNK  G+SEGYGFVEF SH  A+KVL+ ++   MPNT+Q FRLNWA+FSTG+
Sbjct: 128 EIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGE 187

Query: 71  KRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRFG 130
           KR E NG DLSIFVGDL+ DV+D++LHETF+ KY SVKAAKVV D NTG SKGYGFVRFG
Sbjct: 188 KRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 247

Query: 131 DDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDS 190
           D+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  NG+ T   + +GD 
Sbjct: 248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQ---GGYMPNGTLT---RPEGDI 305

Query: 191 TNTT 194
            NTT
Sbjct: 308 MNTT 305

The following BLAST results are available for this feature:

BLAST of Spg025331 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144139.1	1.4e-139	82.48	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]
XP_008444645.1	8.7e-137	81.53	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo] >KAA0060870.1...	[more]
XP_004152729.1	1.1e-136	81.53	polyadenylate-binding protein RBP47 [Cucumis sativus] >KGN62542.1 hypothetical p...	[more]
XP_038885237.1	4.3e-136	81.21	polyadenylate-binding protein RBP47-like [Benincasa hispida]	[more]
XP_023002570.1	1.6e-130	78.41	polyadenylate-binding protein RBP47-like [Cucurbita maxima] >XP_023002571.1 poly...	[more]

BLAST of Spg025331 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX80	1.2e-88	59.05	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
Q9LEB3	2.1e-88	58.07	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q9SX79	1.3e-87	58.10	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
Q0WW84	8.9e-76	53.67	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
F4I3B3	6.4e-74	53.40	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of Spg025331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRE8	7.0e-140	82.48	polyadenylate-binding protein RBP47-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7V0L8	4.2e-137	81.53	Polyadenylate-binding protein RBP47-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BBK1	4.2e-137	81.53	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103487914...	[more]
A0A0A0LP64	5.5e-137	81.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360590 PE=4 SV=1	[more]
A0A6J1KPB2	7.7e-131	78.41	polyadenylate-binding protein RBP47-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Spg025331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47500.1	8.5e-90	59.05	RNA-binding protein 47C'	[more]
AT1G47490.1	9.4e-89	58.10	RNA-binding protein 47C	[more]
AT3G19130.1	6.4e-77	53.67	RNA-binding protein 47B	[more]
AT1G49600.1	4.6e-75	53.40	RNA-binding protein 47A	[more]
AT1G47490.2	3.4e-62	67.39	RNA-binding protein 47C	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 80..154 e-value: 6.3E-16 score: 68.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 81..150 e-value: 1.4E-12 score: 47.2 coord: 11..55 e-value: 2.4E-7 score: 30.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 1..66 score: 9.473308
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 79..158 score: 16.568354
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 68..192 e-value: 1.4E-20 score: 75.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..65 e-value: 1.3E-12 score: 49.6
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 11..193
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 11..193
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 194..278
None	No IPR available	PANTHER	PTHR47640:SF16	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 194..278
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 12..67 e-value: 3.9012E-26 score: 96.1776
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 78..157 e-value: 1.42153E-46 score: 148.966
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 11..68
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 193..247
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 63..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025331.1	Spg025331.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding