Spg025329 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025329
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein FAR1-RELATED SEQUENCE 4-like
Location	scaffold13: 42186973 .. 42189888 (-)
RNA-Seq Expression	Spg025329
Synteny	Spg025329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGACATGGAATATGATGGTGGAGAGTTGAGGGGTTTCGACATAGACATTGGTAGTGCATATAATGACTTTTTAAGTCGATTATATGCATTGACCAGTATAAATTCAGAGGAATTTGACCTTACAATAAGATGTGTACTCCAATTGATGGTCAAGGCACCCGCGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACCTGGAATAGGGTCTCTGACGTACCCATATACATATCCACAATCCCAAAGTGTCCTAGTAACCAAGCCTCGCGACCATTTCCCATCCCATGCGTCATGCCAAATAATTCGTATAAGGTGGAGCAGAATTTATCATCGGCATCGGTCCCAAACAATATACCATCGGCATCTACATCCTTCCCATGCGATGAATCAAAAAATATTCTTGTGTATAACTTGGGGGACGATGAAGACCATGATAGTGAACTTTATGGTGGCCAAGATTGGGGGGACTATAGACATGATGAGGAGTACGATGATGACGAGGACACAGACACGGAGGTTGATGTAGCTGTGGGAGATAATGAGGAAGAGATTCACGTACAGTACACTGAGGTTCCTTCTGCGCTTGAACAGGTGGCGACATGCTCTTCCATTCCAAATGCTTCATCGAAGGCAATCATCATGACAGGTCAGTCTTCCTCTTCTAAAGATGTAGAAGTTGGAGAAGTATTCATGTGTAAAATAGACTTGTACATGAGAATGTCTGTGATTGCAATGAGAAGGAATTTCCAGTTTAGGGTTAAAAAGTCAATGAAGAACATATGGGTAGCTAACTGTGTAATTGAAGGATGCAAATGGAGGGTTCGCGCTATGAGTGTTACTAAGGGGTGTGAAATATTTAAGATCACGAAGTACTGCAATATTCATGCCTGTGTACGTGAAATGTTGACAGATGATCATAGGCAGGCCAAGAGTTGGGTTATTGGAAATTTGATCAAGTCGAGGTTCCAAGACGTCGGTCGTACTTATAGGCCAAAGGATATTGTGAACGATATTAGACAAGATTTTGGTGTGAATTTAAGCTATGACAAGGCTTGGCGGACTAGAGAAGAAGCTTTTATTCTTGCTAGAGGGTCTCCAGAAGAATCTTATAGACTGTTACCAAGATTTGGTGAAGCATTGAAAGTCGAAAATCCCGGTACAGTGTTCGACTTAGAACTTGAAGATGATGGACACTTTAAGCATGTGTTTATGGCACTAGGTGCTTCTATTGGAGGGTTCAAGAGCTCCATTCGTCCAGTGCTAGTTGTTGATGGAACACACTTACGGGGAAAATTTTGTGGAAAACTACTTCTTGCGACCGGTGTAGATGGAAACAACCAGTTATATCCTGTAGGGTGGGCCTTTGCCGGGGGAGAAACTGATCAATCATGGACGTATTTTTTTCGACAGATGGAACGTGCAGTTGGACAGGTTCCTGGTCTGGTCATTGTGTCTGATAGACATGCCAGCATCGGTAAGGCTATGAAAACCGTGTTCCCTAATGCATTTCACTGCGTGTGTATCCGGCACTTAGGGGAGAACCTGAAAACGCATTTTAAGACCGGGAACTTTATGAAAGTATTTGAAGGAGCTGCTAGGGCATTTCCTGTGGTTAAATTCAATGAGTACTGGCAGCAACTACCAGAAAATATCAGGACATACCTACAGGGGGTTGGAGTTGAGAGGTGGCCTCGAGCATACCAGTGTGGTCGTCGGTATAACCAAATGACCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGGATCATATCAGAGGGTGGCTCCAAGGAAAATACTACAAACGCAGGAATAAGCACTCCAGTAACCCGAGCCAGTGGTCGAAGTTTGCTACAGAAATCTTGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGGTCAAACCTATTGCTCGATATGAGTTTCAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACGTGCACCTGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTACATGCACTTATCGACATATCGAATATCATACTCTTTGTTCCAAAGTCTACCATGTCGACTCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCGGAGTGGAAGAGATCACCTCAGTTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGGGTTGGTCGTCGTCAGACGTTGAGAATACCGTCTACGGGAGAAGTGCAGCATGTCCGCAAATGCAGTCGGTGCGGGAATAGGGGTCATAACAGAAAAACATGCAGACAACCACTGAACAATTTTTTATGTTTTTTTGTACGACTATTTTGACATGAATTTTTGTTTCCTGGATGTTTTAGTCATGAATTTCATTTCTATATTTTGAAGTTAGATATTTTATATCCGTTCATTTATTTTATATAAATAAAAGGAAAAAAAAGAGGCATAATACGCTCACTGTCATTTTTCCCTGTCCAACGAGACCGAGAACGAAACCGGGAACGAGACCGAGAAAAGTGACAAATGACAGTGGGTTCTTAATGTGGGTAGCATCTTACTGTCAAATTTCCCGATCATCGAGACCGGGACCGCGACCGAGAACGGGACCAAGAAAAATACAAATGACAGTGACTAAATCTCGGTAGCATCTTACTGTCAAATTTCCCGATCAACGAGACCGGGACTAAGATCGAGAACGGGACCGGGAATATTGACAGTGGGTTCCAACATCTTGTATGTCGTGAGCTTCTCTGTGTCAATGTTCCCGGGCGAAATCGTGACCGGGAAGAGCGGGAAATTTGGCAGTAA

mRNA sequence

ATGCCTCGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGACATGGAATATGATGGTGGAGAGTTGAGGGGTTTCGACATAGACATTGGTAGTGCATATAATGACTTTTTAAGTCGATTATATGCATTGACCAGTATAAATTCAGAGGAATTTGACCTTACAATAAGATGTGTACTCCAATTGATGGTCAAGGCACCCGCGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACCTGGAATAGGGTCTCTGACGTACCCATATACATATCCACAATCCCAAAGTGTCCTAGTAACCAAGCCTCGCGACCATTTCCCATCCCATGCGTCATGCCAAATAATTCGTATAAGGTGGAGCAGAATTTATCATCGGCATCGGTCCCAAACAATATACCATCGGCATCTACATCCTTCCCATGCGATGAATCAAAAAATATTCTTGTGTATAACTTGGGGGACGATGAAGACCATGATAGTGAACTTTATGGTGGCCAAGATTGGGGGGACTATAGACATGATGAGGAGTACGATGATGACGAGGACACAGACACGGAGGTTGATGTAGCTGTGGGAGATAATGAGGAAGAGATTCACGTACAGTACACTGAGGTTCCTTCTGCGCTTGAACAGCAACTACCAGAAAATATCAGGACATACCTACAGGGGGTTGGAGTTGAGAGGTGGCCTCGAGCATACCAGTGTGGTCGTCGGTATAACCAAATGACCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGGATCATATCAGAGGGTGGCTCCAAGGAAAATACTACAAACGCAGGAATAAGCACTCCAGTAACCCGAGCCAGTGGTCGAAGTTTGCTACAGAAATCTTGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGGTCAAACCTATTGCTCGATATGAGTTTCAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACGTGCACCTGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTACATGCACTTATCGACATATCGAATATCATACTCTTTGTTCCAAAGTCTACCATGTCGACTCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCGGAGTGGAAGAGATCACCTCAGTTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGGGTTGGTCGTCGTCAGACGTTGAGAATACCGTCTACGGGAGAAGTGCAGCATGTCCGCAAATGCAGTCGCATCTTACTGTCAAATTTCCCGATCAACGAGACCGGGACTAAGATCGAGAACGGGACCGGGAATATTGACAGTGGGTTCCAACATCTTGTATGTCGTGAGCTTCTCTGTGTCAATGTTCCCGGGCGAAATCGTGACCGGGAAGAGCGGGAAATTTGGCAGTAA

Coding sequence (CDS)

ATGCCTCGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGACATGGAATATGATGGTGGAGAGTTGAGGGGTTTCGACATAGACATTGGTAGTGCATATAATGACTTTTTAAGTCGATTATATGCATTGACCAGTATAAATTCAGAGGAATTTGACCTTACAATAAGATGTGTACTCCAATTGATGGTCAAGGCACCCGCGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACCTGGAATAGGGTCTCTGACGTACCCATATACATATCCACAATCCCAAAGTGTCCTAGTAACCAAGCCTCGCGACCATTTCCCATCCCATGCGTCATGCCAAATAATTCGTATAAGGTGGAGCAGAATTTATCATCGGCATCGGTCCCAAACAATATACCATCGGCATCTACATCCTTCCCATGCGATGAATCAAAAAATATTCTTGTGTATAACTTGGGGGACGATGAAGACCATGATAGTGAACTTTATGGTGGCCAAGATTGGGGGGACTATAGACATGATGAGGAGTACGATGATGACGAGGACACAGACACGGAGGTTGATGTAGCTGTGGGAGATAATGAGGAAGAGATTCACGTACAGTACACTGAGGTTCCTTCTGCGCTTGAACAGCAACTACCAGAAAATATCAGGACATACCTACAGGGGGTTGGAGTTGAGAGGTGGCCTCGAGCATACCAGTGTGGTCGTCGGTATAACCAAATGACCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGGATCATATCAGAGGGTGGCTCCAAGGAAAATACTACAAACGCAGGAATAAGCACTCCAGTAACCCGAGCCAGTGGTCGAAGTTTGCTACAGAAATCTTGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGGTCAAACCTATTGCTCGATATGAGTTTCAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACGTGCACCTGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCATGCGATCGCTACATGCACTTATCGACATATCGAATATCATACTCTTTGTTCCAAAGTCTACCATGTCGACTCTTTGATAGATGCATATGCACAACCCATACAACCCCTTGGGCATGAGTCGGAGTGGAAGAGATCACCTCAGTTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGGGTTGGTCGTCGTCAGACGTTGAGAATACCGTCTACGGGAGAAGTGCAGCATGTCCGCAAATGCAGTCGCATCTTACTGTCAAATTTCCCGATCAACGAGACCGGGACTAAGATCGAGAACGGGACCGGGAATATTGACAGTGGGTTCCAACATCTTGTATGTCGTGAGCTTCTCTGTGTCAATGTTCCCGGGCGAAATCGTGACCGGGAAGAGCGGGAAATTTGGCAGTAA

Protein sequence

MPRVWVCYGGLWNERDMEYDGGELRGFDIDIGSAYNDFLSRLYALTSINSEEFDLTIRCVLQLMVKAPAFVIRNDEDLNTFLTWNRVSDVPIYISTIPKCPSNQASRPFPIPCVMPNNSYKVEQNLSSASVPNNIPSASTSFPCDESKNILVYNLGDDEDHDSELYGGQDWGDYRHDEEYDDDEDTDTEVDVAVGDNEEEIHVQYTEVPSALEQQLPENIRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGKYYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSRILLSNFPINETGTKIENGTGNIDSGFQHLVCRELLCVNVPGRNRDREEREIWQ

Homology

[Close]

BLAST of Spg025329 vs. NCBI nr
Match: XP_022145820.1 (uncharacterized protein LOC111015181 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-58
Identity = 112/219 (51.14%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY QMTTN+AE  N++ + AR+LP+TA +DHIRG LQ  
Sbjct: 295 VREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNTLFRHARKLPVTALLDHIRGKLQNW 354

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   +S  +  S +A  +  +     RRHVV  I ++ FQV+D +L G V+L+A T
Sbjct: 355 FYDRRTLAASRSTTLSDYAENMYAEYSNSVRRHVVDNIDQFHFQVQDDNLDGIVDLNAMT 414

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C CREF+Y+++PCSHAIA  T R+I  ++LC + Y  +S I AYA+PI P+GH S W  S
Sbjct: 415 CNCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSS 474

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P+FV++ V PP+ VPRVGRR+T RIPSTGEV+  RKC R
Sbjct: 475 PEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGR 513

[Close]

BLAST of Spg025329 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 237.3 bits (604), Expect = 2.9e-58
Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +  YL+ +G+++W R YQ G RYNQMT+NLAE  N+VL  AR+LPITA  ++ R  LQ  
Sbjct: 605 VHKYLEDIGLDKWARTYQPGMRYNQMTSNLAESMNAVLVHARDLPITALFENCRSLLQQW 664

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   SS  +  +++A  IL++V E+AR H V+PI R+EF+V DG    RVN++++T
Sbjct: 665 FYDRRTAGSSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGATKVRVNINSKT 724

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           CTC++F YYE+PCSHAIA    R+I  HTLCS  Y +D+LI AY +P+ PLG E +W   
Sbjct: 725 CTCKQFYYYEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYPLGDEEDWILP 784

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
             +V   + PPR VPRVGR QT RIPS GEV+ V KC R
Sbjct: 785 YDYVPTTIQPPRFVPRVGRCQTARIPSVGEVRQVHKCGR 823

[Close]

BLAST of Spg025329 vs. NCBI nr
Match: XP_022154610.1 (uncharacterized protein LOC111021833 [Momordica charantia])

HSP 1 Score: 234.6 bits (597), Expect = 1.9e-57
Identity = 110/219 (50.23%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY QMTTN+AE  N+  + AR+LP+TA +DHIRG L   
Sbjct: 88  VREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNAFFRHARKLPVTALLDHIRGKLHNW 147

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   +S  +  S +A  +  +  + ARRHVV  I ++ FQV DG+  G V+L+A T
Sbjct: 148 FYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFDGIVDLNAMT 207

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C+CREF+Y+++PCSH IA    R+I  ++LC + Y  +S I AYA+PI P+GH S W  S
Sbjct: 208 CSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSS 267

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P+FV++ V PP+ VPRVGRR T RIPSTGEV+  RKC R
Sbjct: 268 PEFVNIPVEPPKTVPRVGRRNTTRIPSTGEVRQTRKCGR 306

[Close]

BLAST of Spg025329 vs. NCBI nr
Match: XP_022146373.1 (uncharacterized protein LOC111015601 [Momordica charantia])

HSP 1 Score: 232.6 bits (592), Expect = 7.1e-57
Identity = 110/219 (50.23%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY  MTTN+ E  N++ K AR+LP+TA +DHI G LQ  
Sbjct: 218 VREYLDDIGKERWARCFQTQLRYTHMTTNITESVNALFKHARKLPVTALLDHIIGKLQNW 277

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   +S  +  S +A  +  +  + ARRHVV  I ++ FQV D +L G V+L+A T
Sbjct: 278 FYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDDNLDGIVDLNAMT 337

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C+CREF+Y+++PCSHAIA  T R+I  ++LC + Y  +  I AYA+PI P+GH S W  S
Sbjct: 338 CSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNFWILAYAEPIFPVGHVSTWNSS 397

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P+FV++ V PP+ VPRVGRR+T RIPSTGEV+  RKC R
Sbjct: 398 PEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGR 436

[Close]

BLAST of Spg025329 vs. NCBI nr
Match: XP_022153146.1 (uncharacterized protein LOC111020715 [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-56
Identity = 112/219 (51.14%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY QMT+N AE  N++ + AR+LP+TA +DHIRG LQ  
Sbjct: 401 VREYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARKLPVTALLDHIRGLLQTW 460

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   SS  +  S +A   L +  + ARRHVV  I ++  QV DG+L G V+ ++RT
Sbjct: 461 FYDRRTLASSRSTTLSYYAENKLAEYSDNARRHVVVNIDQFHVQVRDGNLDGIVDFNSRT 520

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C CREF+Y+++PCSHAIA    R+I  +TLC + Y  +S + AYA+PI P+GH S W  S
Sbjct: 521 CNCREFDYFKIPCSHAIAEAMMRNINPYTLCDEAYTTNSWVMAYAEPIFPIGHVSTWNSS 580

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P FVD  V  P  VPRVGRR+T+RIPSTGEV+  RKC R
Sbjct: 581 PDFVDTPVEAPYMVPRVGRRRTVRIPSTGEVRQTRKCGR 619

[Close]

BLAST of Spg025329 vs. ExPASy TrEMBL
Match: A0A6J1CVL4 (uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015181 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.2e-59
Identity = 112/219 (51.14%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY QMTTN+AE  N++ + AR+LP+TA +DHIRG LQ  
Sbjct: 295 VREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNTLFRHARKLPVTALLDHIRGKLQNW 354

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   +S  +  S +A  +  +     RRHVV  I ++ FQV+D +L G V+L+A T
Sbjct: 355 FYDRRTLAASRSTTLSDYAENMYAEYSNSVRRHVVDNIDQFHFQVQDDNLDGIVDLNAMT 414

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C CREF+Y+++PCSHAIA  T R+I  ++LC + Y  +S I AYA+PI P+GH S W  S
Sbjct: 415 CNCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSS 474

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P+FV++ V PP+ VPRVGRR+T RIPSTGEV+  RKC R
Sbjct: 475 PEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGR 513

[Close]

BLAST of Spg025329 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-58
Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +  YL+ +G+++W R YQ G RYNQMT+NLAE  N+VL  AR+LPITA  ++ R  LQ  
Sbjct: 605 VHKYLEDIGLDKWARTYQPGMRYNQMTSNLAESMNAVLVHARDLPITALFENCRSLLQQW 664

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   SS  +  +++A  IL++V E+AR H V+PI R+EF+V DG    RVN++++T
Sbjct: 665 FYDRRTAGSSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGATKVRVNINSKT 724

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           CTC++F YYE+PCSHAIA    R+I  HTLCS  Y +D+LI AY +P+ PLG E +W   
Sbjct: 725 CTCKQFYYYEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYPLGDEEDWILP 784

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
             +V   + PPR VPRVGR QT RIPS GEV+ V KC R
Sbjct: 785 YDYVPTTIQPPRFVPRVGRCQTARIPSVGEVRQVHKCGR 823

[Close]

BLAST of Spg025329 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 9.0e-58
Identity = 110/219 (50.23%), Postives = 148/219 (67.58%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY QMTTN+AE  N+  + AR+LP+TA +DHIRG L   
Sbjct: 88  VREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNAFFRHARKLPVTALLDHIRGKLHNW 147

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   +S  +  S +A  +  +  + ARRHVV  I ++ FQV DG+  G V+L+A T
Sbjct: 148 FYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFDGIVDLNAMT 207

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C+CREF+Y+++PCSH IA    R+I  ++LC + Y  +S I AYA+PI P+GH S W  S
Sbjct: 208 CSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPVGHVSTWNSS 267

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P+FV++ V PP+ VPRVGRR T RIPSTGEV+  RKC R
Sbjct: 268 PEFVNIPVEPPKTVPRVGRRNTTRIPSTGEVRQTRKCGR 306

[Close]

BLAST of Spg025329 vs. ExPASy TrEMBL
Match: A0A6J1CYE7 (uncharacterized protein LOC111015601 OS=Momordica charantia OX=3673 GN=LOC111015601 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-57
Identity = 110/219 (50.23%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY  MTTN+ E  N++ K AR+LP+TA +DHI G LQ  
Sbjct: 218 VREYLDDIGKERWARCFQTQLRYTHMTTNITESVNALFKHARKLPVTALLDHIIGKLQNW 277

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   +S  +  S +A  +  +  + ARRHVV  I ++ FQV D +L G V+L+A T
Sbjct: 278 FYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDDNLDGIVDLNAMT 337

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C+CREF+Y+++PCSHAIA  T R+I  ++LC + Y  +  I AYA+PI P+GH S W  S
Sbjct: 338 CSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNFWILAYAEPIFPVGHVSTWNSS 397

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P+FV++ V PP+ VPRVGRR+T RIPSTGEV+  RKC R
Sbjct: 398 PEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGR 436

[Close]

BLAST of Spg025329 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.8e-57
Identity = 112/219 (51.14%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 220 IRTYLQGVGVERWPRAYQCGRRYNQMTTNLAECTNSVLKDARELPITAFMDHIRGWLQGK 279
           +R YL  +G ERW R +Q   RY QMT+N AE  N++ + AR+LP+TA +DHIRG LQ  
Sbjct: 401 VREYLDDIGKERWARCFQTELRYTQMTSNNAESVNALFRHARKLPVTALLDHIRGLLQTW 460

Query: 280 YYKRRNKHSSNPSQWSKFATEILEKVEEKARRHVVKPIARYEFQVEDGHLGGRVNLHART 339
           +Y RR   SS  +  S +A   L +  + ARRHVV  I ++  QV DG+L G V+ ++RT
Sbjct: 461 FYDRRTLASSRSTTLSYYAENKLAEYSDNARRHVVVNIDQFHVQVRDGNLDGIVDFNSRT 520

Query: 340 CTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEWKRS 399
           C CREF+Y+++PCSHAIA    R+I  +TLC + Y  +S + AYA+PI P+GH S W  S
Sbjct: 521 CNCREFDYFKIPCSHAIAEAMMRNINPYTLCDEAYTTNSWVMAYAEPIFPIGHVSTWNSS 580

Query: 400 PQFVDVEVLPPRRVPRVGRRQTLRIPSTGEVQHVRKCSR 439
           P FVD  V  P  VPRVGRR+T+RIPSTGEV+  RKC R
Sbjct: 581 PDFVDTPVEAPYMVPRVGRRRTVRIPSTGEVRQTRKCGR 619

[Close]

BLAST of Spg025329 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 52.0 bits (123), Expect = 1.6e-06
Identity = 56/225 (24.89%), Postives = 97/225 (43.11%), Query Frame = 0


Query: 204 QYTEVPSALEQQLPENIRTYLQGVGVERWPRAYQCGRRYNQMTTN----LAECTNSVLKD 263
           ++    + ++++ PE  R +L      RW  A+  GRRY  M  N     A C  +  + 
Sbjct: 509 EFVSYMNDIKEKNPE-ARKWLDQFPQNRWALAHDNGRRYGIMEINTKALFAVC--NAFEQ 568

Query: 264 ARELPITAFMDHIRGWLQGKYYKRRNKHSSNPSQWSKFATEILEKVEE-----KARRHVV 323
           A  + +T  +  +   L+ K+ K  +   S+ +    +   +++K+EE         ++V
Sbjct: 569 AGHV-VTGSVLLLFDELRSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTYSYIV 628

Query: 324 KPIARYEFQVEDGHLGGR--VNLHARTCTCREFEYYELPCSHAIATC---TYRHIEYHTL 383
            P+    FQV      G   V L   +CTC +F+ Y+ PC HA+A C    +  ++Y   
Sbjct: 629 TPLDNNAFQVATALDKGECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDD 688

Query: 384 CSKVYHVDSLIDAYAQPIQPLGHESEWKRSPQFVDVEVLPPRRVP 415
           C   Y ++ L   YA     +   S W   P+   V  L P  +P
Sbjct: 689 C---YTLERLKRTYATIFSHVPEMSAW---PEASGVPRLLPPVIP 723

[Close]

BLAST of Spg025329 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 45.1 bits (105), Expect = 1.9e-04
Identity = 25/83 (30.12%), Postives = 35/83 (42.17%), Query Frame = 0


Query: 331 GRVNLHARTCTCREFEYYELPCSHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPL 390
           G V L+  TCTC EF+  + PC HA+A C    I         Y V+     Y+    P+
Sbjct: 650 GIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSPV 709

Query: 391 GHESEWKRS---PQFVDVEVLPP 411
              S W  +   P  +   + PP
Sbjct: 710 PELSAWPEAYGVPTLIPPVIEPP 732

[Close]

BLAST of Spg025329 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 43.9 bits (102), Expect = 4.3e-04
Identity = 47/224 (20.98%), Postives = 97/224 (43.30%), Query Frame = 0


Query: 183 DEDTDTEVDVAVGDNEEEIHVQYTEVPSALEQQLPENIRTYLQGVGVERWPRAYQCGRRY 242
           D + ++ V+ A   N++E   ++    + ++++ PE  + +L  +   +W  A+  G RY
Sbjct: 484 DYNLESLVEQAGSTNQKE---EFDSYMNDIKEKNPEAWK-WLDQIPRHKWALAHDSGLRY 543

Query: 243 NQMTTNLAECTNSVLKDARELP-----ITAFMDHIRGWLQGKYYKRRNKHSSNPSQWSKF 302
             +  +      ++    R  P     +T  +  +   L+  + K  +   S+ ++   +
Sbjct: 544 GIIEID----REALFAVCRGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVY 603

Query: 303 ATEILEKVEE---KARRHVVKPIARYEFQVEDGHLGGR--VNLHARTCTCREFEYYELPC 362
               ++K+EE    +  +V+  + R  F+V +        V L+  TCTCR+F+ Y+ PC
Sbjct: 604 TEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPC 663

Query: 363 SHAIATCTYRHIEYHTLCSKVYHVDSLIDAYAQPIQPLGHESEW 397
            HA+A      I       + Y V+     YA    P+   + W
Sbjct: 664 LHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAW 699

The following BLAST results are available for this feature:

BLAST of Spg025329 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145820.1	1.3e-58	51.14	uncharacterized protein LOC111015181 [Momordica charantia]	[more]
XP_022154803.1	2.9e-58	51.60	uncharacterized protein LOC111021969 [Momordica charantia]	[more]
XP_022154610.1	1.9e-57	50.23	uncharacterized protein LOC111021833 [Momordica charantia]	[more]
XP_022146373.1	7.1e-57	50.23	uncharacterized protein LOC111015601 [Momordica charantia]	[more]
XP_022153146.1	1.2e-56	51.14	uncharacterized protein LOC111020715 [Momordica charantia]	[more]

BLAST of Spg025329 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVL4	6.2e-59	51.14	uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1DLB0	1.4e-58	51.60	uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1DK35	9.0e-58	50.23	uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1CYE7	3.4e-57	50.23	uncharacterized protein LOC111015601 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1DJT1	5.8e-57	51.14	uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Spg025329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64255.1	1.6e-06	24.89	MuDR family transposase	[more]
AT1G49920.1	1.9e-04	30.12	MuDR family transposase	[more]
AT1G64260.1	4.3e-04	20.98	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 338..365 e-value: 2.1E-7 score: 40.6
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 334..361 e-value: 1.9E-7 score: 30.6
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 331..363 score: 9.556961

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025329.1	Spg025329.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding