Spg025313 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg025313
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein GDAP2 homolog
Locationscaffold13: 42087115 .. 42091241 (-)
RNA-Seq ExpressionSpg025313
SyntenySpg025313
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGTTCAACTGATAAGATGATTCGATCTTTATTATCCTTGAAGTTAAAAGAAAAAAAAAAAACATCATTCACTCCTCAATTTTCTAAAACTGGAACTTTTGGCTGGGTGCCATTATTTTTAAATTAAACAGTGCGTTTTAAATTTGGAGACAACAATTGGACTGTGCAACGAACGATATCGCATGTCTTCTCAAAAAAAACGATATCGCATGGAAAAAGACAAAAAGAAACAAATTAAAAAAAAAAAACATTTTTCGAAATAAAGAAAGACGTAATTATCTCCGGATCTCATGTCAAAAAAAAAAAAAAAATCTCCGGATCCGAATGTGCGTCGCTAGCTCATCAACTCGTCGAAATTAGCTGGACCTTTTTTTTTCATCCGAATAACAAAAGTCGGAGAAAAAAAAAAATGAACACTTTCTGAAATCCCGAAAGGAATTTGCAGGTTCTTTATCCTTCTCCCATCATCAATTTCTGTGAATTTCTTCAATTATTTTCATTTTCCTTTTTGTTATTTGCTTCCTGTTTCTTCGGAAAATGTCAGGTTAGGGTTGCAAAATCAAATTGAGTACGTTTTCGGTTGCTATGGAATGATTTGAAATTGAAATCGGTTTTTGTTATACTTTATGAAATTTTCCTTGAATTGCTTCACTGATTGTCTATGGAACTTTATTTGCCTTTTCTTGTCAAAATTTTACAGGGGTTGTTTCAGGGATTTCTCTGATGAATGTTTGTCTTTGCATGGGCAATCGATTTTTGAGGTTCCCAAGGACTTGGTGGGGTTGTTAAAATGTACAGGACAGTGGCTACATCTGCAGCCACAACTACAACAACAGATAGCGTGGATTATGTTGTAAATTTGGATCAAATTCCACGCTGGAGTGATGCAGAACATAGGTCTTCGTTGGATTTCGTGAACGAAGATCCTTCCTCTAATTCGTACTTTCCTGATCCTCTGACGTCTCCATCTGACGCAGATGGTGGTAGCAATGGAGTGGTTTCGAGATTTCCCGTCGATCATGAAATTAATTCCAAAATATATCTGTGGAGGGGGAATCCATGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACGAACGAGGTGAGTGTTAATCTTCTTCCCCTCTTCTTCTTCTCCTTCTTCCGTCTGAAATGGAAAACTTTAATAAATTAACAAAAGGGATGGAAAAGCGATGCCAAAAGTCCCGGATAACTTAATAACAGTTCCAAAGAATAAAAAGAATGTTTCATTTTTTCTCAATGAAAGTTGGCTTTTCATAAAAAAAGGAAAAATCTCAGCCCAGAATTTTGTACATTACAAAGAAAAAGACAAACTAAGAAATAGACGAAAGCACAGAAACCAATTGAAAGTAAGAATTTCAATTCTTTGCTTATAGTCGACAACATCAATGCATACTAATTATCCCACGTAACATGTTTCTTGTTCAAAAAAAAAAAAAAACTAATTATCCCACGTAAAATGTGATTTTATGTGGTTCATCTTTAATGTGAATATCATTTGAAATGTGTTGAACTCAAAAAAAAAAAAAAAAAAAAAAGAATATCATTTGAAATGGGATATACTAGTGGGAAAATTAGTTGAAAGTGGAAGTTTGTTAATTATTGGTTTTTGGCATGTCTATTTGACATGGCATAAAGTATCGATCATGAACATCAAGATCACATTGCCTTTGTGCAATTGCTTCGATTGGAAAGACGTAACTAGATGGTGGTTCCCTTCCCTTACCTAAAGAGGTTCTTGAAAAAATACCCATGATGTGAATACCAAGGAGCCAAAACCTAAATGCCTGAGCTTAAGCAACGTTTAAGTTATGGGTGGATTGGAAGTTTTGTCTAAGAAAGTTGAAAGTACTTAGGTCCTTTCTAACGGAGATAGAAGATGAGAGCTTCATATCCTCCATTAGTGTTAGCTTTTGACTGCTGGAAGACATCTTAAATTCCAAGTACTATGATACTATCATCTTCTAAGAAAATCATCTTCTCTAACAGTGCATCATACCAACCATGACAATCATCTTCATGAAAAGTTGTCCAAAAGATGGAAAAGCAAGTAGAAAACGATAAATGGTTGTATGAGATAACAGAGGATAAATACGTTGATATTTTACCTTTATGAAGAACATGGGGAGATTATCACTTGTTCCTAGATCTAATGATGAAGGATCTTTTGTATAAGACATGCAACTGGAAGTTGTTGGCCAAAGTATATATGTGTGTGTATATATTTTGAGTTTAACAATTGCAGGGTGGGGATCGAATCATCAATCTGCAGGATGGCGATGGTAGTTGTTGTCAGCTAGAGTATAATTGAGTTATTGGTGGGTGAATAGGAATTGATATTGAGAAAGATAGATTAGGGAAGACAACCCTAGCTAGGGAAAACAACAGTGTAGACAAGAAGAGCGTTGTCCTCCCCATGTGCTCTTCTTGACTACTAGGAGATGATTAAAAAAAATGGCAGCATCTTTAAAGAAAGTAAGATAAGTTAAGGTGGTACAAAATTTAAACTAAAATAACAGTACTTGTACCCTTTTCAAACTTGAGATAACCATTTCAAACGTTTTGGGTGCAAACTTTGTGAGTTTAGAGCAAACAAGTATAGGCTAATATTTTTGGTTATGAGAAACAAAGGCTTTAGAGGCTTTATAGGAACCAAGCCTAATATGAAATCTCACCATTCCACATTTGAGCAATTGAAAGGAGTTTAACGAAAGAGTATAGAAATTTCAAATATTCAAGTAACTCCACAAACTCACCATGATTAATCAAACCAACAACTTGACTCTTGATTGAATTCTTTATCTGCTAGACCAAACTAGCATGACCTTGGAACCAAGTTCTTTTAGTGTCATCAGTTGATGGATAAGTCATGTCACATGCGACCATCTATATAGAGGTGAATCTAATCTGGGTGCGCAAAATTAGGATAGAATTACAAACCAGAAACTCTAACCATCTTTTGAAATGGTTCCACATGATGATCAAGCCAAACACACGGACAAAATGAGAATGAGACGATGAGTTAAGAACAAGTGATGAAAGTGGACAGAAGTCTGATTGACTCACTATATTATGATATTTGGTCGCTATTTTTATTGTACTAGGGGAAATTAATCACTTTGTATTTGCTTGGTATGTATGTACTGGAATAACTAAACGTTTGGGGAGGATGAAGACCATAGATGATATGGAAGAGGTTGGGATCTTATCTGAGGATCTTAAGGAGGAGCGCATGTCTTTAAGAATCGAGTTTGCTGAGGTAGTGAGGAAAGAGTCCTGTAGTTGGAGGCAGAAGGCTAAAGTGAAATGGGCTATGGACGGGGATTGTAACTTTTCATTCTTCCATCGGGTGTCTAATGGAAGAAGGAGCAAAAACCTTATCAACTCTTTGATGAATGATCGGGGGGAGGTGGTTAGAGGGAAGAAGGAGATCGAGGAGGAGATGCTCTCTTCCTTCACAACCGTTTATGGTCCCCCCATAGAGAATAAACCTTTCGTAGAAGGAGTGGATTGGAGTTCTATTTCGGACCAGGAGAGGAGTTTTGACTCCCTTTTTTTGTTGGATGAGATCAAAAGGGTCGTTTTCAAGAGCAATAGGAACAAATCCCCCAATCCTGATGGTTTTTCGATGGGATTCTTCTAGGAGAATTGGGAGAGAATTAAACAGGACTTGGAGAGAGTGTTCAGATAATTCTTCGAGAGGGGTATTATAGATAAGAGAATGAATGAAATCTTTGTTTGCCTTATCCCTAAGAAGGAGAGGGTGGAAATAGTGAAGGATTTTAGACCCATTAGTTTGGTTACGAGCGTTTACAAGATTATTTCCAAGGTTCTTGCCAACAGATTGAAAAAGGTTCTCCCTTCTACAATATCCGATTCCCAAGGAGCTTTTATCTAAGGGAGATGATAGGCCTCCGATTAAGTATGTGTACAGTAGGAGAAGGAAGAAGAATAAAAGTGAAGTTGTATGAAGGTACTTAGTGTTAGTTAAAGGTTGTTAATGGTAGTTCTGAAGTAGTTATATCTGTGTGTATATAGTAGCAGGTTGTATAGGGTATGGGTACCTTTTGAGTAGTGAAGTAAGAGGGTCAAGGGGAGAGAATTAG

mRNA sequence

ATGTACAGGACAGTGGCTACATCTGCAGCCACAACTACAACAACAGATAGCGTGGATTATGTTGTAAATTTGGATCAAATTCCACGCTGGAGTGATGCAGAACATAGGTCTTCGTTGGATTTCGTGAACGAAGATCCTTCCTCTAATTCGTACTTTCCTGATCCTCTGACGTCTCCATCTGACGCAGATGGTGGTAGCAATGGAGTGGTTTCGAGATTTCCCGTCGATCATGAAATTAATTCCAAAATATATCTGTGGAGGGGGAATCCATGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACGAACGAGGGTGGGGATCGAATCATCAATCTGCAGGATGGCGATGGGGAAATTAATCACTTTGTATTTGCTTGGTATGTATGTACTGGAATAACTAAACGTTTGGGGAGGATGAAGACCATAGATGATATGGAAGAGGTTGGGATCTTATCTGAGGATCTTAAGGAGGAGCGCATGTCTTTAAGAATCGAGTTTGCTGAGGTAGTGAGGAAAGAGTCCTGTAGTTGGAGGCAGAAGGCTAAAGTGAAATGGGCTATGGACGGGGATTGTAACTTTTCATTCTTCCATCGGGTGTCTAATGGAAGAAGGAGCAAAAACCTTATCAACTCTTTGATGAATGATCGGGGGGAGGTGGTTAGAGGGAAGAAGGAGATCGAGGAGGAGATGCTCTCTTCCTTCACAACCGTTTATGCAGGTTGTATAGGGTATGGGTACCTTTTGAGTAGTGAAGTAAGAGGGTCAAGGGGAGAGAATTAG

Coding sequence (CDS)

ATGTACAGGACAGTGGCTACATCTGCAGCCACAACTACAACAACAGATAGCGTGGATTATGTTGTAAATTTGGATCAAATTCCACGCTGGAGTGATGCAGAACATAGGTCTTCGTTGGATTTCGTGAACGAAGATCCTTCCTCTAATTCGTACTTTCCTGATCCTCTGACGTCTCCATCTGACGCAGATGGTGGTAGCAATGGAGTGGTTTCGAGATTTCCCGTCGATCATGAAATTAATTCCAAAATATATCTGTGGAGGGGGAATCCATGGAATCTCGAGGTAGATGCTGTCGTGAATTCTACGAACGAGGGTGGGGATCGAATCATCAATCTGCAGGATGGCGATGGGGAAATTAATCACTTTGTATTTGCTTGGTATGTATGTACTGGAATAACTAAACGTTTGGGGAGGATGAAGACCATAGATGATATGGAAGAGGTTGGGATCTTATCTGAGGATCTTAAGGAGGAGCGCATGTCTTTAAGAATCGAGTTTGCTGAGGTAGTGAGGAAAGAGTCCTGTAGTTGGAGGCAGAAGGCTAAAGTGAAATGGGCTATGGACGGGGATTGTAACTTTTCATTCTTCCATCGGGTGTCTAATGGAAGAAGGAGCAAAAACCTTATCAACTCTTTGATGAATGATCGGGGGGAGGTGGTTAGAGGGAAGAAGGAGATCGAGGAGGAGATGCTCTCTTCCTTCACAACCGTTTATGCAGGTTGTATAGGGTATGGGTACCTTTTGAGTAGTGAAGTAAGAGGGTCAAGGGGAGAGAATTAG

Protein sequence

MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPSSNSYFPDPLTSPSDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGDRIINLQDGDGEINHFVFAWYVCTGITKRLGRMKTIDDMEEVGILSEDLKEERMSLRIEFAEVVRKESCSWRQKAKVKWAMDGDCNFSFFHRVSNGRRSKNLINSLMNDRGEVVRGKKEIEEEMLSSFTTVYAGCIGYGYLLSSEVRGSRGEN
Homology
[Close]
BLAST of Spg025313 vs. NCBI nr
Match: XP_038890071.1 (protein GDAP2 homolog [Benincasa hispida] >XP_038890072.1 protein GDAP2 homolog [Benincasa hispida])

HSP 1 Score: 205.3 bits (521), Expect = 6.4e-49
Identity = 101/110 (91.82%), Postives = 106/110 (96.36%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTT+SVDYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTESVDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGDRI 110
           SDA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D +
Sbjct: 61  SDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLDEV 110

[Close]
BLAST of Spg025313 vs. NCBI nr
Match: XP_008465697.1 (PREDICTED: protein GDAP2 homolog [Cucumis melo] >XP_016903466.1 PREDICTED: protein GDAP2 homolog [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-48
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTDS+DYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           SDA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. NCBI nr
Match: XP_004143794.1 (protein GDAP2 homolog isoform X1 [Cucumis sativus] >XP_031741405.1 protein GDAP2 homolog isoform X1 [Cucumis sativus] >KGN51197.1 hypothetical protein Csa_008053 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-48
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTDS+DYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           SDA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. NCBI nr
Match: XP_031741406.1 (protein GDAP2 homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-48
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTDS+DYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           SDA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. NCBI nr
Match: XP_022150324.1 (protein GDAP2 homolog [Momordica charantia])

HSP 1 Score: 201.8 bits (512), Expect = 7.0e-48
Identity = 100/108 (92.59%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTV TSAATTTTT+SVDYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVDTSAATTTTTESVDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           +D DGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  TDGDGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06
Identity = 28/84 (33.33%), Postives = 42/84 (50.00%), Query Frame = 0 

Query: 21  VVNLDQIPRWSDAEHRSSLDFVNEDPSSNSYFPDPLTSPSDADGGSNGVVSRFPVDHEIN 80
           +V+++ +P+WS                     P P   P   +  S+  +S FPVD EIN
Sbjct: 10  LVDINSLPKWSTT-------------------PVPNYEPGSNESQSSSFLSPFPVDEEIN 69

Query: 81  SKIYLWRGNPWNLEVDAVVNSTNE 105
           +K+ LW G+   L  DA+VN+TNE
Sbjct: 70  AKVVLWNGDITKLAADAIVNTTNE 74

[Close]
BLAST of Spg025313 vs. ExPASy TrEMBL
Match: A0A1S4E5F4 (protein GDAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103503322 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 5.3e-49
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTDS+DYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           SDA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. ExPASy TrEMBL
Match: A0A0A0KS03 (Macro domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487740 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 5.3e-49
Identity = 101/108 (93.52%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTDS+DYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDSLDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           SDA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. ExPASy TrEMBL
Match: A0A6J1D9R1 (protein GDAP2 homolog OS=Momordica charantia OX=3673 GN=LOC111018520 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.4e-48
Identity = 100/108 (92.59%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTV TSAATTTTT+SVDYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVDTSAATTTTTESVDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  SDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           +D DGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  TDGDGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 108

[Close]
BLAST of Spg025313 vs. ExPASy TrEMBL
Match: A0A6J1KAK4 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493730 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47
Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTD VDYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDIVDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  S-DADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           S DA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 109

[Close]
BLAST of Spg025313 vs. ExPASy TrEMBL
Match: A0A6J1G3J6 (protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450452 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47
Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 0 

Query: 1   MYRTVATSAATTTTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLTSP 60
           MYRTVATSAATTTTTD VDYVVNLDQIPRWSDAEHRSSL+FVNEDPS SNSYFPDPLTSP
Sbjct: 1   MYRTVATSAATTTTTDIVDYVVNLDQIPRWSDAEHRSSLEFVNEDPSFSNSYFPDPLTSP 60

Query: 61  S-DADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           S DA+GG+NGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNE  D
Sbjct: 61  SDDAEGGTNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNENLD 109

[Close]
BLAST of Spg025313 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 131.7 bits (330), Expect = 8.3e-31
Identity = 69/110 (62.73%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 1   MYRTVATSAATT--TTTDSVDYVVNLDQIPRWSDAEHRSSLDFVNEDPS-SNSYFPDPLT 60
           MY+T+ T+      T T+S DYVV LDQIPRWSD E RSSL+    DP  SN  + +PL 
Sbjct: 2   MYQTIPTAPTIRGGTPTESGDYVVTLDQIPRWSDVEQRSSLEDETGDPEHSNPRYANPLA 61

Query: 61  SPSDADGGSNGVVSRFPVDHEINSKIYLWRGNPWNLEVDAVVNSTNEGGD 108
           S S+A    NG+VS+FPVDHEINS+IYLWRG PWNLEVDAVVNSTNE  D
Sbjct: 62  SSSEAGSSGNGMVSKFPVDHEINSRIYLWRGEPWNLEVDAVVNSTNENLD 111

[Close]
BLAST of Spg025313 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-06
Identity = 22/59 (37.29%), Postives = 36/59 (61.02%), Query Frame = 0 

Query: 177 WRQKAKVKWAMDGDCNFSFFHRVSNGRRSKNLINSLMNDRGEVVRGKKEIEEEMLSSFT 236
           +RQK+++KW  DGD N  FFH+V    ++KNLI  L  D    V    +++E +++ +T
Sbjct: 435 YRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYT 493

The following BLAST results are available for this feature:
BLAST of Spg025313 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890071.16.4e-4991.82protein GDAP2 homolog [Benincasa hispida] >XP_038890072.1 protein GDAP2 homolog ... [more]
XP_008465697.11.1e-4893.52PREDICTED: protein GDAP2 homolog [Cucumis melo] >XP_016903466.1 PREDICTED: prote... [more]
XP_004143794.11.1e-4893.52protein GDAP2 homolog isoform X1 [Cucumis sativus] >XP_031741405.1 protein GDAP2... [more]
XP_031741406.11.1e-4893.52protein GDAP2 homolog isoform X2 [Cucumis sativus][more]
XP_022150324.17.0e-4892.59protein GDAP2 homolog [Momordica charantia][more]
BLAST of Spg025313 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A7T1673.1e-0633.33Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1[more]
BLAST of Spg025313 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E5F45.3e-4993.52protein GDAP2 homolog OS=Cucumis melo OX=3656 GN=LOC103503322 PE=3 SV=1[more]
A0A0A0KS035.3e-4993.52Macro domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487740 PE=3 ... [more]
A0A6J1D9R13.4e-4892.59protein GDAP2 homolog OS=Momordica charantia OX=3673 GN=LOC111018520 PE=4 SV=1[more]
A0A6J1KAK42.9e-4792.66protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111493730 PE=3 SV=1[more]
A0A6J1G3J62.9e-4792.66protein GDAP2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450452 PE=3 SV=1[more]
BLAST of Spg025313 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G69340.18.3e-3162.73appr-1-p processing enzyme family protein [more]
AT1G43760.15.4e-0637.29DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043472Macro domain-likeGENE3D3.40.220.10Leucine Aminopeptidase, subunit E, domain 1coord: 2..123
e-value: 3.4E-13
score: 51.2
IPR043472Macro domain-likeSUPERFAMILY52949Macro domain-likecoord: 70..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..69
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 1..107
NoneNo IPR availablePANTHERPTHR11106:SF109APPR-1-P PROCESSING ENZYME FAMILY PROTEINcoord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg025313.1Spg025313.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane