Spg025248 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTTATCCCTTTTATGTAATTCCCTCCTAGAGAAGATTTTCAATTTTAAACTTTCAATTTCGGATTAATCCAACGAAAGCAAGAACTCAAATTGGATATGAATTAGTTTTGCGTAATCCAACCTCGTCCAAAACAATTCCGTCGATGGCACGTAAACAAGCACGACAAACTGCGAACCCGATGAACAAAATTCAATAAAATCTGTCTAGATTTAGATTTAGAAGCCTTCTCGGTCGAAACTGCTCGAATCCTCTTTGTTCATCGAACGCTCTGCGCGAAAGATAGCCACAATCCAAATCCATGTCTTCCTTTTCTTCCTTAGCGATCAGAACATTGTCCGCTTTCCGACGAAAGTCTTACCAAGCTTCTTCTCCACTACCCATTTCCAAGAATTTCATTTCTCTCGTCCGAAAATCTTCATCGGTGCCCTTTTGCTGCAATTCGACATCTCCGTGCAAGCGGTCGTTCTCGATCATGTCCAGCGCTGTACCCGGAAATGGACCGCAAGAATCACGGGTTGAGGTAATTTTTTTTGTTTTCTGTAACTATTAGACTCTTTTTCTGTTCTGTTCTGCATCGAGCTGATTCTGTTTATGAAGAATTGAGTTATGGGTTGTTATAAATTTTGGTAGGGAGCTGAATCCTTTCTTAGGAATGTTTTGGCGAGCATGGAGGCAGTTTATTTGAGTCGTAATCCTACTGCAAAAACCATATTGGAGCTCGTTCGATCGGCCGATAATGACAGAATTTGCTATGATCATCTTGCATTTAGGACTTTTGGGGTATTTTCCTCCGATTTTTTTGTTATTTACTCTCAATTTCCGAAAATCAGGTTGCATTTTCCTTTGTTGGATTGATTTAAGTTTCGTACACGTTGCCATGGATGATTCTTGTTTTGTTAATTTATTACTGTCTCCTCTTTAGAGAGGTGCTTTGTTATCAGTCTAATTTATGTTAAAGTCGTGTTTGTATCTGTGATGAATTAGATGAATGGCCATGGTATTGACTCATTAGCAAACTTTTTTCTGGATTTTGGATATACACGACAAGAAGAATTATCATTCCCAGCCAAAAAGCTAAAAGCATTTTGGTTTTCACCTCCCACCATTTCTCATGCTGCTTATGATGGTGATGGAGTTAATGGACCTCTGCCAAGAGTGTTCATATCAGAACTTCTTGTGGATCAGATGAGTCAACCAACTCAGGTTTGTTTTAGGAACTTCTTGACACAGCAATGCTGCATATCTGCCTGAATGTTTTTATTTTGTTTTGAAATTTAGACAAGAACTTCTATCTTGGGTTCTCTGGAACGATTGCTTTTCATCCTGGTTAATTTATATATATTGTAACACTGGAGTTCGCTAGGCAAAAGTCTTGTTTATAAACAAAAGGATACAGGAATTCTGAATTACGAAATGTAAGGTCCTGACCACTATAAAAGAATGATACAACAATAGGCCTTTTATTAGGCCTCCAATAGTCAATGGCATGTTAGGAAGGGCAAGATGGAAAATGTCCTCCTTGACAGTTAGTTACGGCAATATGTGTTTTGTTTATATAGTTAGGAATGTCGTCTGCAAGAGGTGGCTCAGGTTAAGGCCTACAGTGTCAAAGTATAACATATGGCCAAAGGTCTTGCATCTTTGAATCTTTGAGTGAGCTTAATGTCATGGGCATAAGGTAGGTAGGTTGCATTTTTTATATCATTTGAGACTCGAAAAATTGGCTAGGCTTGCTTCTAAAAGGTGTTCTTGCACCGGTTGGGCCTATTGATGGTACATAATAGAGTTGATTCCCTACACTTTTGTTCTCTATCTAGGTGCATAATTTGGGGAACACGATCATGACTTGAATTACAACTTCGTATTGTTTTTCAGTTTTAATCAATCCATAATATACCTAATCGTCTTACAGAAAACCAAATCTTTTGGTAATTTGCTTTAGCTTTTTCCGACTGTGTTCAGGAAATAATCAGAAAATACACTGAAAGTTCTCACAAGGGGAAGAAGCATGCTGCTCTTGCAAGTGCTCTAGGTTCCTTGACATGGGAAAAGCCTTTGCATTCTGAGTTTGTGCAACTAGCGAGGTTCTTAATCTCCATTGACTTGGAAATTTATGTTATAAAAGTTAATTCGTGATTTTATTACCAGGCCAAATATGAACTCTGCTAGTTTTTTTAAGTTGGAAACTGTATGAAATGTATGGTCTGAGCACCATAACAATGGCTTTTTTTTTTTTTTTTGAATGCATAGGGAGAGTGAATATGCTGCCTGGACTCTCGTGAATGGTTATGCAGTTAATCACGTGACTATTTCGACCCATCGTCTGAAATCTTATCTGAAAAATATCAAAAACCTCAATCAATTCATCGAAGAGAATGGTTATAATCTGAATTCTGAAGGTGGAGTTTTGAAAGGTACACGACACGGCTAGTCTTGTTATCTGATATTGTATGTTTTGATCATCTATTGTTAATAATTACTACCTTGCTAAAATTTGAGCACCGGAGCTAATATACTTGATCATTTCGTTATCAGTAAGCCCGGATGGTCTTCTACTGCAAAGTTCAACCCTGGCTGATTCAATTTGTTTCGAATTTTCTGATGGAATGACTACTTCAGTCCCCTGCTCATACATCGAGTTCGCCGAGCGATTGGTACTGCCTCAATATAAACATCTACCAGAAACAGAGGTACGTAAACTAGCCCCTTTCACAGGTCGTTTCATGCTTTCACTACCCTGCGTGAGTCTTGCTGTGAAAAATCATCCGTAATCTCTAAGAATGATTTGACACTGATACACATCATACTACAAAAAGAACGGAAGATAGAAAGAATGCTTGTACAAATTCAAATCTTATTTTGGTCCCAAACATTTAAATGTTTTGTTTTGGTCCCAAACTTTTAGATGTTCTATTCTAGTTCTTAAACTTTTCATGAAAAATTATTTGTCAATTGTCATTACAGTTAATTTTTCATCTGTCAGATATTCAATAGTGAGAAAGAAAGAGAGTAAAATTAATGGATCCAATTGCTTCACTTAGCAAACTTGGAGGGTTTGATTTTTACCACTTGAAGTTTAGGGGTCCAATTTTTCCACTTATGATAGTTTGAGGGTTTAATTTTTACACTAGAGAGTTTAGAGGTGCAATTGCAAAAGCCTGCCATACTTCGAGAATGGTTGGTGTAATTTGTCCTAAATTTTTAATGCATAATTGAGATGATATTTCAAACTTATTCAGGTGAAAGAGTACCACAGACGGGATGGATTTGAAGTTGGAAATGCTGATAAGATCTTTGAAAGTACATCCAAACAGCAGCAAACGGCAAAGGCTTGAGAACTGTTCCTCCCTTTTGAAGTTCTGCAAGGGGAAACCAAATTGCTGGAGGAACTGCACTGCACTTGAGTTTGAATGCTGATAACATCTTACTGCCCCCACCTCATTCAATTTGATATGATGTTGTATAGAATGATCTAACTTATAGTAACTAAATAAATCTCTTTTACCCACATTTTAACATTTTTTTTCTAATCGTTGAAGTGAG ATGTCTTCCTTTTCTTCCTTAGCGATCAGAACATTGTCCGCTTTCCGACGAAAGTCTTACCAAGCTTCTTCTCCACTACCCATTTCCAAGAATTTCATTTCTCTCGTCCGAAAATCTTCATCGGTGCCCTTTTGCTGCAATTCGACATCTCCGTGCAAGCGGTCGTTCTCGATCATGTCCAGCGCTGTACCCGGAAATGGACCGCAAGAATCACGGGTTGAGGGAGCTGAATCCTTTCTTAGGAATGTTTTGGCGAGCATGGAGGCAGTTTATTTGAGTCGTAATCCTACTGCAAAAACCATATTGGAGCTCGTTCGATCGGCCGATAATGACAGAATTTGCTATGATCATCTTGCATTTAGGACTTTTGGGATGAATGGCCATGGTATTGACTCATTAGCAAACTTTTTTCTGGATTTTGGATATACACGACAAGAAGAATTATCATTCCCAGCCAAAAAGCTAAAAGCATTTTGGTTTTCACCTCCCACCATTTCTCATGCTGCTTATGATGGTGATGGAGTTAATGGACCTCTGCCAAGAGTGTTCATATCAGAACTTCTTGTGGATCAGATGAGTCAACCAACTCAGGAAATAATCAGAAAATACACTGAAAGTTCTCACAAGGGGAAGAAGCATGCTGCTCTTGCAAGTGCTCTAGGTTCCTTGACATGGGAAAAGCCTTTGCATTCTGAGTTTGTGCAACTAGCGAGGGAGAGTGAATATGCTGCCTGGACTCTCGTGAATGGTTATGCAGTTAATCACGTGACTATTTCGACCCATCGTCTGAAATCTTATCTGAAAAATATCAAAAACCTCAATCAATTCATCGAAGAGAATGGTTATAATCTGAATTCTGAAGGTGGAGTTTTGAAAGTAAGCCCGGATGGTCTTCTACTGCAAAGTTCAACCCTGGCTGATTCAATTTGTTTCGAATTTTCTGATGGAATGACTACTTCAGTCCCCTGCTCATACATCGAGTTCGCCGAGCGATTGGTACTGCCTCAATATAAACATCTACCAGAAACAGAGGTACGTAAACTAGCCCCTTTCACAGGTCGTTTCATGCTTTCACTACCCTGCGTGAAAGAGTACCACAGACGGGATGGATTTGAAGTTGGAAATGCTGATAAGATCTTTGAAAGTACATCCAAACAGCAGCAAACGGCAAAGGCTTGA ATGTCTTCCTTTTCTTCCTTAGCGATCAGAACATTGTCCGCTTTCCGACGAAAGTCTTACCAAGCTTCTTCTCCACTACCCATTTCCAAGAATTTCATTTCTCTCGTCCGAAAATCTTCATCGGTGCCCTTTTGCTGCAATTCGACATCTCCGTGCAAGCGGTCGTTCTCGATCATGTCCAGCGCTGTACCCGGAAATGGACCGCAAGAATCACGGGTTGAGGGAGCTGAATCCTTTCTTAGGAATGTTTTGGCGAGCATGGAGGCAGTTTATTTGAGTCGTAATCCTACTGCAAAAACCATATTGGAGCTCGTTCGATCGGCCGATAATGACAGAATTTGCTATGATCATCTTGCATTTAGGACTTTTGGGATGAATGGCCATGGTATTGACTCATTAGCAAACTTTTTTCTGGATTTTGGATATACACGACAAGAAGAATTATCATTCCCAGCCAAAAAGCTAAAAGCATTTTGGTTTTCACCTCCCACCATTTCTCATGCTGCTTATGATGGTGATGGAGTTAATGGACCTCTGCCAAGAGTGTTCATATCAGAACTTCTTGTGGATCAGATGAGTCAACCAACTCAGGAAATAATCAGAAAATACACTGAAAGTTCTCACAAGGGGAAGAAGCATGCTGCTCTTGCAAGTGCTCTAGGTTCCTTGACATGGGAAAAGCCTTTGCATTCTGAGTTTGTGCAACTAGCGAGGGAGAGTGAATATGCTGCCTGGACTCTCGTGAATGGTTATGCAGTTAATCACGTGACTATTTCGACCCATCGTCTGAAATCTTATCTGAAAAATATCAAAAACCTCAATCAATTCATCGAAGAGAATGGTTATAATCTGAATTCTGAAGGTGGAGTTTTGAAAGTAAGCCCGGATGGTCTTCTACTGCAAAGTTCAACCCTGGCTGATTCAATTTGTTTCGAATTTTCTGATGGAATGACTACTTCAGTCCCCTGCTCATACATCGAGTTCGCCGAGCGATTGGTACTGCCTCAATATAAACATCTACCAGAAACAGAGGTACGTAAACTAGCCCCTTTCACAGGTCGTTTCATGCTTTCACTACCCTGCGTGAAAGAGTACCACAGACGGGATGGATTTGAAGTTGGAAATGCTGATAAGATCTTTGAAAGTACATCCAAACAGCAGCAAACGGCAAAGGCTTGA MSSFSSLAIRTLSAFRRKSYQASSPLPISKNFISLVRKSSSVPFCCNSTSPCKRSFSIMSSAVPGNGPQESRVEGAESFLRNVLASMEAVYLSRNPTAKTILELVRSADNDRICYDHLAFRTFGMNGHGIDSLANFFLDFGYTRQEELSFPAKKLKAFWFSPPTISHAAYDGDGVNGPLPRVFISELLVDQMSQPTQEIIRKYTESSHKGKKHAALASALGSLTWEKPLHSEFVQLARESEYAAWTLVNGYAVNHVTISTHRLKSYLKNIKNLNQFIEENGYNLNSEGGVLKVSPDGLLLQSSTLADSICFEFSDGMTTSVPCSYIEFAERLVLPQYKHLPETEVRKLAPFTGRFMLSLPCVKEYHRRDGFEVGNADKIFESTSKQQQTAKA Homology
BLAST of Spg025248 vs. NCBI nr
Match: XP_023538588.1 (uncharacterized protein LOC111799309 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 600.1 bits (1546), Expect = 1.3e-167 Identity = 312/394 (79.19%), Postives = 339/394 (86.04%), Query Frame = 0
BLAST of Spg025248 vs. NCBI nr
Match: XP_022951508.1 (uncharacterized protein LOC111454305 [Cucurbita moschata]) HSP 1 Score: 596.3 bits (1536), Expect = 1.9e-166 Identity = 312/394 (79.19%), Postives = 337/394 (85.53%), Query Frame = 0
BLAST of Spg025248 vs. NCBI nr
Match: KAG6585804.1 (hypothetical protein SDJN03_18537, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020736.1 hypothetical protein SDJN02_17424 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 594.3 bits (1531), Expect = 7.4e-166 Identity = 312/394 (79.19%), Postives = 335/394 (85.03%), Query Frame = 0
BLAST of Spg025248 vs. NCBI nr
Match: XP_023002142.1 (uncharacterized protein LOC111496091 [Cucurbita maxima]) HSP 1 Score: 592.0 bits (1525), Expect = 3.7e-165 Identity = 310/394 (78.68%), Postives = 334/394 (84.77%), Query Frame = 0
BLAST of Spg025248 vs. NCBI nr
Match: XP_038886795.1 (uncharacterized protein LOC120076905 [Benincasa hispida]) HSP 1 Score: 580.5 bits (1495), Expect = 1.1e-161 Identity = 310/393 (78.88%), Postives = 330/393 (83.97%), Query Frame = 0
BLAST of Spg025248 vs. ExPASy TrEMBL
Match: A0A6J1GHV7 (uncharacterized protein LOC111454305 OS=Cucurbita moschata OX=3662 GN=LOC111454305 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 9.4e-167 Identity = 312/394 (79.19%), Postives = 337/394 (85.53%), Query Frame = 0
BLAST of Spg025248 vs. ExPASy TrEMBL
Match: A0A6J1KIM8 (uncharacterized protein LOC111496091 OS=Cucurbita maxima OX=3661 GN=LOC111496091 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.8e-165 Identity = 310/394 (78.68%), Postives = 334/394 (84.77%), Query Frame = 0
BLAST of Spg025248 vs. ExPASy TrEMBL
Match: A0A1S3CME1 (uncharacterized protein LOC103502586 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502586 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 2.5e-159 Identity = 305/393 (77.61%), Postives = 329/393 (83.72%), Query Frame = 0
BLAST of Spg025248 vs. ExPASy TrEMBL
Match: A0A1S3CNV1 (uncharacterized protein LOC103502586 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502586 PE=4 SV=1) HSP 1 Score: 563.9 bits (1452), Expect = 5.2e-157 Identity = 305/402 (75.87%), Postives = 329/402 (81.84%), Query Frame = 0
BLAST of Spg025248 vs. ExPASy TrEMBL
Match: A0A6J1DUS2 (uncharacterized protein LOC111024647 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024647 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 6.8e-157 Identity = 291/352 (82.67%), Postives = 307/352 (87.22%), Query Frame = 0
BLAST of Spg025248 vs. TAIR 10
Match: AT1G07040.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). ) HSP 1 Score: 443.7 bits (1140), Expect = 1.5e-124 Identity = 233/368 (63.32%), Postives = 278/368 (75.54%), Query Frame = 0
BLAST of Spg025248 vs. TAIR 10
Match: AT1G27020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 514 Blast hits to 514 proteins in 175 species: Archae - 0; Bacteria - 311; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). ) HSP 1 Score: 313.5 bits (802), Expect = 2.3e-85 Identity = 161/310 (51.94%), Postives = 214/310 (69.03%), Query Frame = 0
BLAST of Spg025248 vs. TAIR 10
Match: AT1G27030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27020.1); Has 504 Blast hits to 502 proteins in 169 species: Archae - 0; Bacteria - 299; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). ) HSP 1 Score: 308.1 bits (788), Expect = 9.8e-84 Identity = 156/318 (49.06%), Postives = 217/318 (68.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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