Spg025122 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025122
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Zinc finger CCCH domain-containing protein 1
Location	scaffold12: 10340189 .. 10341253 (-)
RNA-Seq Expression	Spg025122
Synteny	Spg025122

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTTTCACGATTGCATTATGATTTACTCTGTGATTGCTGTGTTTTGTTTACTTGATTTCGAATCGGTTTGCTGCAATGTGAAAGAACCTGAGGTAGATCTAGGATTGTTTGAGAAAACGTGAAGAATTGCATTCTATGCTTAAAACAAACGTATTTGCAGATTTTTTTTTTCATTATCTATTTCAGAGCAAGTGCTTACGACGGTGAGCCTAGATCTGACGCCACTATTCCTAGTCACAACCCAGCCAATGGTACAAAGCCCTCGTTGCCCATTGTGATCATTGGAGAGCTTGAGAGATAAGTTAATTCAACTTGTTCTTTCTTGTTTTCCATTGTAGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGGTATTAGCGATTATTGTTCCATCCAATTTTTTTTTATGTGTATATATAAATTTCCCCGTTTTCATCATGACTTTTTTTTATATTTACAATTTTTCTGATAGTAGTCGTTCTCTATACGTTTTTAACCCTTTGATCTTCAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACAGACGGTTGATGAAGATGAAGAGGAGGACACTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCTGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGACTTTAAAAGGGAACACGCAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCTGCTTAGAGCTTCTGCTCATATAAGAGCTTCATAA

mRNA sequence

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTTTCACGATTGCATTATGATTTACTCTGTGATTGCTGTGTTTTGTTTACTTGATTTCGAATCGGTTTGCTGCAATGTGAAAGAACCTGAGAGCAAGTGCTTACGACGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACAGACGGTTGATGAAGATGAAGAGGAGGACACTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCTGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGACTTTAAAAGGGAACACGCAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCTGCTTAGAGCTTCTGCTCATATAAGAGCTTCATAA

Coding sequence (CDS)

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTTTCACGATTGCATTATGATTTACTCTGTGATTGCTGTGTTTTGTTTACTTGATTTCGAATCGGTTTGCTGCAATGTGAAAGAACCTGAGAGCAAGTGCTTACGACGCATCTATTCTGAATCCGGCTGGTCTTACTCGTATACAATGACAGATACAGGTGAAAATCAGCAGCCTGAACAAGTCTGTAGCTTCTTCAGAAAACCCACGAAGAATAAAAACATCAGAAAACAGACGGTTGATGAAGATGAAGAGGAGGACACTAAAACTGAGACTTCGTTCCTGGCTAATCAGAAAAAAGCTCCCAAGACTGAGAGCAAGCTTTATTTCTCTTCTGGACCCTCAAAAAGTTCCTTGTCTAATGAGTCAAATGCGGAGCCTGAAAAACCAATTTTCCAATTTGAGTCTTCAAAAGAAATTCAAGTTCACCATGACAGCAGAGCAACTGCAACTCTGGAAACAGAGACTGAGTTCTCAAGAGATGCACGAGCTATCTGTGAGAGAGTTTTGAAGCAAGCTGAGGAGGCTGAGAAGTTGTATAAAGGGGTCAATGCTTATGTGGATTACAAGGCTGACTTTAAAAGGGAACACGCAATTTCAAGTGAAAAAGCTGGTGGAGCACATGGGCTGCTTAGAGCTTCTGCTCATATAAGAGCTTCATAA

Protein sequence

MEEICYLFQSKCFHDCIMIYSVIAVFCLLDFESVCCNVKEPESKCLRRIYSESGWSYSYTMTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLYFSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVLKQAEEAEKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS

Homology

[Close]

BLAST of Spg025122 vs. NCBI nr
Match: XP_008466746.1 (PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_008466747.1 PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-72
Identity = 154/181 (85.08%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTG+ Q  EQVCSFFRKPTKNKNIRK+TVDEDEEED+K ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. NCBI nr
Match: KAA0055485.1 (zinc finger CCCH domain-containing protein 1 [Cucumis melo var. makuwa] >TYK08965.1 zinc finger CCCH domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-72
Identity = 154/181 (85.08%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTG+ Q  EQVCSFFRKPTKNKNIRK+TVDEDEEED+K ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. NCBI nr
Match: XP_004149426.1 (zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypothetical protein Csa_018272 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-71
Identity = 153/181 (84.53%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTG+ Q  EQVCSFFRKPTKNKNIRK+TVDEDEEED+K ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSK+S SNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. NCBI nr
Match: XP_022958735.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 3.1e-71
Identity = 152/181 (83.98%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTGENQQPEQVCSFF+KPTKNKNIRK+TVDEDEEE   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. NCBI nr
Match: XP_022971769.1 (zinc finger CCCH domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 278.1 bits (710), Expect = 6.9e-71
Identity = 151/181 (83.43%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTGENQQPEQVCSFF+KPTKNKNIRK+TVDEDEE+   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. ExPASy Swiss-Prot
Match: Q8GX84 (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g01350 PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 3.8e-48
Identity = 109/177 (61.58%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 66  ENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEE-DTKTETSFLANQKKAPKTESKLYFSSG 125
           +  Q +QVC+FF+KPTK+KNIRK+T+D DEE+ D+K+E+S L N KK  K +SKLYFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 126 PSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVLKQA 185
           PSKSS +  ++  PE+ +F ++SSKEIQV +DS ATATLETET+F++DARAI ERVLK+A
Sbjct: 82  PSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 186 EEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS 232
           +EA          EKLYKG++ Y D+KA F+RE  ISSEKAGG+HG LRASAHIR S
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 196

[Close]

BLAST of Spg025122 vs. ExPASy Swiss-Prot
Match: Q9FNG6 (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=At5g06420 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.5e-48
Identity = 107/180 (59.44%), Postives = 136/180 (75.56%), Query Frame = 0


Query: 63  DTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEE-DTKTETSFLANQKKAPKTESKLYF 122
           D   NQ+ +QVC+FF+KPTK+KNIRK+T+D DEE+ D+K+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 123 SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVL 182
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAI ERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 183 KQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS 232
           K+A+ A          EKLYKG++ Y D+KA F+RE  ISSEKAGG+HG LRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 231

[Close]

BLAST of Spg025122 vs. ExPASy Swiss-Prot
Match: Q6K4V3 (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0301000 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-32
Identity = 92/178 (51.69%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 73  VCSFFRKPTKNKNIRKQ---TVDEDEEEDTKTETSFLANQKKAPKTESKLYFSSGPSKSS 132
           VCSF RKP   KNIRK+       D++++  +     A  KKAP + SKL+FSS      
Sbjct: 18  VCSFVRKPP--KNIRKRPTAPAGSDDDDEDGSGAIAAARAKKAPSSTSKLFFSSA----- 77

Query: 133 LSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVLKQAEEAEK 192
              + ++EP +  FQ+ESS+ IQ   DSRATATLETETEF RDARAI ER LKQAEE+ K
Sbjct: 78  ---DGSSEPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQAEESLK 137

Query: 193 ----------------LYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS 232
                           +YKG++ Y DYKA F+REH +SSEKAGG+HG LRASAHIR S
Sbjct: 138 KNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHIRLS 183

[Close]

BLAST of Spg025122 vs. ExPASy TrEMBL
Match: A0A1S3CS03 (zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103504086 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72
Identity = 154/181 (85.08%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTG+ Q  EQVCSFFRKPTKNKNIRK+TVDEDEEED+K ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. ExPASy TrEMBL
Match: A0A5D3CBS9 (Zinc finger CCCH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00590 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72
Identity = 154/181 (85.08%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTG+ Q  EQVCSFFRKPTKNKNIRK+TVDEDEEED+K ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSK+SLSNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKNSLSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. ExPASy TrEMBL
Match: A0A0A0KFS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.1e-71
Identity = 153/181 (84.53%), Postives = 159/181 (87.85%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTG+ Q  EQVCSFFRKPTKNKNIRK+TVDEDEEED+K ETSFL NQKKAPKTESKLY
Sbjct: 1   MTDTGDTQPSEQVCSFFRKPTKNKNIRKRTVDEDEEEDSKAETSFLLNQKKAPKTESKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSK+S SNESN EP KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKNSSSNESNVEPNKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. ExPASy TrEMBL
Match: A0A6J1H4B5 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459918 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 152/181 (83.98%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTGENQQPEQVCSFF+KPTKNKNIRK+TVDEDEEE   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEESKSTETSVLQNQKKAPKTDSKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. ExPASy TrEMBL
Match: A0A6J1I9H7 (zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111470453 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.3e-71
Identity = 151/181 (83.43%), Postives = 160/181 (88.40%), Query Frame = 0


Query: 61  MTDTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEEDTKTETSFLANQKKAPKTESKLY 120
           MTDTGENQQPEQVCSFF+KPTKNKNIRK+TVDEDEE+   TETS L NQKKAPKT+SKLY
Sbjct: 1   MTDTGENQQPEQVCSFFKKPTKNKNIRKRTVDEDEEDSKSTETSVLQNQKKAPKTDSKLY 60

Query: 121 FSSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERV 180
           FSSGPSKS+L+NESN E +KPIFQFESSKEIQVHHDSRATATLETET+FSRDARAI ERV
Sbjct: 61  FSSGPSKSNLTNESNVESDKPIFQFESSKEIQVHHDSRATATLETETDFSRDARAIRERV 120

Query: 181 LKQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRA 232
           LKQAEEA          EKLYKGVNAYVDYKA F+REH ISSEKAGGAHG LRASAHIRA
Sbjct: 121 LKQAEEALKGKGKSSGGEKLYKGVNAYVDYKAGFRREHTISSEKAGGAHGPLRASAHIRA 180

[Close]

BLAST of Spg025122 vs. TAIR 10
Match: AT1G01350.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-49
Identity = 109/177 (61.58%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 66  ENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEE-DTKTETSFLANQKKAPKTESKLYFSSG 125
           +  Q +QVC+FF+KPTK+KNIRK+T+D DEE+ D+K+E+S L N KK  K +SKLYFSSG
Sbjct: 22  QETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSG 81

Query: 126 PSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVLKQA 185
           PSKSS +  ++  PE+ +F ++SSKEIQV +DS ATATLETET+F++DARAI ERVLK+A
Sbjct: 82  PSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKA 141

Query: 186 EEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS 232
           +EA          EKLYKG++ Y D+KA F+RE  ISSEKAGG+HG LRASAHIR S
Sbjct: 142 DEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 196

[Close]

BLAST of Spg025122 vs. TAIR 10
Match: AT5G06420.1 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 191.8 bits (486), Expect = 6.1e-49
Identity = 107/180 (59.44%), Postives = 136/180 (75.56%), Query Frame = 0


Query: 63  DTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEE-DTKTETSFLANQKKAPKTESKLYF 122
           D   NQ+ +QVC+FF+KPTK+KNIRK+T+D DEE+ D+K+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 123 SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVL 182
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAI ERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 183 KQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS 232
           K+A+ A          EKLYKG++ Y D+KA F+RE  ISSEKAGG+HG LRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 231

[Close]

BLAST of Spg025122 vs. TAIR 10
Match: AT5G06420.2 (Zinc finger (CCCH-type/C3HC4-type RING finger) family protein )

HSP 1 Score: 191.8 bits (486), Expect = 6.1e-49
Identity = 107/180 (59.44%), Postives = 136/180 (75.56%), Query Frame = 0


Query: 63  DTGENQQPEQVCSFFRKPTKNKNIRKQTVDEDEEE-DTKTETSFLANQKKAPKTESKLYF 122
           D   NQ+ +QVC+FF+KPTK+KNIRK+T+D DEE+ D+K+E+S L N KK  K +S LYF
Sbjct: 57  DNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYF 116

Query: 123 SSGPSKSSLSNESNAEPEKPIFQFESSKEIQVHHDSRATATLETETEFSRDARAICERVL 182
           SSGP     S  ++  PE+P+F ++SSKEIQV +DS ATATLETET+F++DARAI ERVL
Sbjct: 117 SSGP-----STRTSGAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVL 176

Query: 183 KQAEEA----------EKLYKGVNAYVDYKADFKREHAISSEKAGGAHGLLRASAHIRAS 232
           K+A+ A          EKLYKG++ Y D+KA F+RE  ISSEKAGG+HG LRASAHIR S
Sbjct: 177 KKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVS 231

The following BLAST results are available for this feature:

BLAST of Spg025122 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466746.1	4.8e-72	85.08	PREDICTED: zinc finger CCCH domain-containing protein 1 [Cucumis melo] >XP_00846...	[more]
KAA0055485.1	4.8e-72	85.08	zinc finger CCCH domain-containing protein 1 [Cucumis melo var. makuwa] >TYK0896...	[more]
XP_004149426.1	2.4e-71	84.53	zinc finger CCCH domain-containing protein 1 [Cucumis sativus] >KGN47699.1 hypot...	[more]
XP_022958735.1	3.1e-71	83.98	zinc finger CCCH domain-containing protein 1 [Cucurbita moschata]	[more]
XP_022971769.1	6.9e-71	83.43	zinc finger CCCH domain-containing protein 1 [Cucurbita maxima]	[more]

BLAST of Spg025122 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX84	3.8e-48	61.58	Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9FNG6	8.5e-48	59.44	Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6K4V3	5.0e-32	51.69	Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Spg025122 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CS03	2.3e-72	85.08	zinc finger CCCH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A5D3CBS9	2.3e-72	85.08	Zinc finger CCCH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0KFS0	1.1e-71	84.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G382870 PE=4 SV=1	[more]
A0A6J1H4B5	1.5e-71	83.98	zinc finger CCCH domain-containing protein 1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1I9H7	3.3e-71	83.43	zinc finger CCCH domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Spg025122 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01350.1	2.7e-49	61.58	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.1	6.1e-49	59.44	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]
AT5G06420.2	6.1e-49	59.44	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..138
None	No IPR available	PANTHER	PTHR12930:SF9	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 61..231
IPR039971	Pre-mRNA-splicing factor CWC24-like	PANTHER	PTHR12930	ZINC FINGER PROTEIN 183	coord: 61..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025122.1	Spg025122.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034247	snoRNA splicing
cellular_component	GO:0000932	P-body
cellular_component	GO:0005684	U2-type spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding