Spg025093 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGCCTTACTGTTAATATTTAAATAATTCTCTAATTTCCTATTTTTCTTTTTGCTAAATTTACCAGGCTGTCACATAGCGATGGGTGTTTTCAGTTACGAAAACGAAGTGGCGACAGTCATTCCTCCAGCCAAGTTCTTCAAGGCATTTATTCTTGATGCCGACCGACTTTTCCCCAAGATTGTGCCACATCAGCCCCAAACCGAAATTCTCGAAGGAAATGGAGGGCCTGGAACTATCAAGAAAATCACCTTCACTCACGGTAAGGTTAAATTAGCATCAATCTCAATAACATGGGTTTATTTAACCTTTTAATTTTTTTTAAAAAGAAAATCATTTTCTTGAAATTAACATTAATTATTTCTTCATATTTTCCTATCAAGCTCTGTTCATACTAGAGAACTTGATCCTATCCTAGTTTTGAAATTCTTCATTAATGGTCCGAACAAAATGATATATGTGAATAAATTATTTCATTACATTATTTTCAAACTTCGTTGTTATTTGGGTGTGTGAGTATAGCGGTAAATTGACATATACCACTACAACAATTTGGGACTACGATGTCGGATTGTATTTTTACAACAAGGACGGATTGACTCTAAGATGACGGATTGTGAAAAAAACGTCACTTTTCTCGAAAAAAAATGTTAACTTTCGAAAATTTGAGATACAATGACAATTTCTAACCGTAATTAAAGAAGACCCTTCCACGATAGTTTTAAACTGTTATTGTTGTAATCTGTTATCGTAGGAGTTCAATCACACCCAGAACAACAACGGATTCAAATCCGTGATCATAGGAGTTTAATAACGGTGCAAAACCGACATCTAAGTCCAAAATTGTTGTAGTGTACCTTCGACTTTGGTTTGAATCAATCAAAATGATATTTTAACCTTTTATGAACGACATGTATATATTGATCGAAAATGTTGCATCTTCAGGGGGCGAAGTGAAATCAATAAAGCACAGAGTGGAGATAGTGGACGAAGCATCGTTGACGTTCAAATACACAGTGTTAGAGGGAGATCATTTATCGGACAGTATAGACCAAATTTCAAAGGAAATAAAGGTGACGGCAGGTCCCGACGGGGGATCCATTTTGAAGAGCAAGAGCGTTTACCACACGAAAGGAGACCACCAAATCAACGAGGAGAAGCTCAAGGCCGCCGAGGAGAAGGGATTGGCCCTTCTTAAGGCGGCCGAGACCTACCTCTTGGCCAACCCCGCCGAATACAACTAAACCAATAACAAAGTTTCAAGCTTTGTTATTTATATTCGAATATTTATGTATTGAGGTTGTGTGTGTTTCATTTGGTTTTTTTAAGGGCGTGGGTGGCTTTTTGAAATGCTTTTTCTTCTAATTAATAAGGGTTTGGTTTGGATTTTATGTTTGTGGATGGAGGGTTTTTATCGTATGCTTGTGAGTTGTTGTGATTGTATTTTCCAAGGGTAAAAGATAATGTATTATTTGGTTTTCAATAAAATTATTGAATAATGAATGTTAAAAATCACACTTTTCTGTC ATGGGTGTTTTCAGTTACGAAAACGAAGTGGCGACAGTCATTCCTCCAGCCAAGTTCTTCAAGGCATTTATTCTTGATGCCGACCGACTTTTCCCCAAGATTGTGCCACATCAGCCCCAAACCGAAATTCTCGAAGGAAATGGAGGGCCTGGAACTATCAAGAAAATCACCTTCACTCACGGAGTTCAATCACACCCAGAACAACAACGGATTCAAATCCGTGATCATAGGAGGGGCGAAGTGAAATCAATAAAGCACAGAGTGGAGATAGTGGACGAAGCATCGTTGACGTTCAAATACACAGTGTTAGAGGGAGATCATTTATCGGACAGTATAGACCAAATTTCAAAGGAAATAAAGGTGACGGCAGGTCCCGACGGGGGATCCATTTTGAAGAGCAAGAGCGTTTACCACACGAAAGGAGACCACCAAATCAACGAGGAGAAGCTCAAGGCCGCCGAGGAGAAGGGATTGGCCCTTCTTAAGGCGGCCGAGACCTACCTCTTGGCCAACCCCGCCGAATACAACTAA ATGGGTGTTTTCAGTTACGAAAACGAAGTGGCGACAGTCATTCCTCCAGCCAAGTTCTTCAAGGCATTTATTCTTGATGCCGACCGACTTTTCCCCAAGATTGTGCCACATCAGCCCCAAACCGAAATTCTCGAAGGAAATGGAGGGCCTGGAACTATCAAGAAAATCACCTTCACTCACGGAGTTCAATCACACCCAGAACAACAACGGATTCAAATCCGTGATCATAGGAGGGGCGAAGTGAAATCAATAAAGCACAGAGTGGAGATAGTGGACGAAGCATCGTTGACGTTCAAATACACAGTGTTAGAGGGAGATCATTTATCGGACAGTATAGACCAAATTTCAAAGGAAATAAAGGTGACGGCAGGTCCCGACGGGGGATCCATTTTGAAGAGCAAGAGCGTTTACCACACGAAAGGAGACCACCAAATCAACGAGGAGAAGCTCAAGGCCGCCGAGGAGAAGGGATTGGCCCTTCTTAAGGCGGCCGAGACCTACCTCTTGGCCAACCCCGCCGAATACAACTAA MGVFSYENEVATVIPPAKFFKAFILDADRLFPKIVPHQPQTEILEGNGGPGTIKKITFTHGVQSHPEQQRIQIRDHRRGEVKSIKHRVEIVDEASLTFKYTVLEGDHLSDSIDQISKEIKVTAGPDGGSILKSKSVYHTKGDHQINEEKLKAAEEKGLALLKAAETYLLANPAEYN Homology
BLAST of Spg025093 vs. NCBI nr
Match: XP_023549146.1 (major allergen Pru ar 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67 Identity = 132/176 (75.00%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Spg025093 vs. NCBI nr
Match: XP_023006045.1 (major allergen Pru ar 1-like [Cucurbita maxima]) HSP 1 Score: 265.8 bits (678), Expect = 2.7e-67 Identity = 132/176 (75.00%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Spg025093 vs. NCBI nr
Match: XP_022959065.1 (major allergen Pru ar 1-like [Cucurbita moschata]) HSP 1 Score: 264.2 bits (674), Expect = 7.9e-67 Identity = 132/176 (75.00%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Spg025093 vs. NCBI nr
Match: KAG7013661.1 (hypothetical protein SDJN02_23828, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261.2 bits (666), Expect = 6.6e-66 Identity = 131/176 (74.43%), Postives = 148/176 (84.09%), Query Frame = 0
BLAST of Spg025093 vs. NCBI nr
Match: XP_038876264.1 (major allergen Pru ar 1-like [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.5e-65 Identity = 130/176 (73.86%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy Swiss-Prot
Match: O50001 (Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.2e-43 Identity = 93/177 (52.54%), Postives = 118/177 (66.67%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy Swiss-Prot
Match: P43186 (Major pollen allergen Bet v 1-M/N OS=Betula pendula OX=3505 GN=BETV1M PE=1 SV=2) HSP 1 Score: 169.9 bits (429), Expect = 2.6e-41 Identity = 88/177 (49.72%), Postives = 114/177 (64.41%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy Swiss-Prot
Match: P15494 (Major pollen allergen Bet v 1-A OS=Betula pendula OX=3505 GN=BETVIA PE=1 SV=2) HSP 1 Score: 168.3 bits (425), Expect = 7.7e-41 Identity = 86/177 (48.59%), Postives = 114/177 (64.41%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy Swiss-Prot
Match: P43184 (Major pollen allergen Bet v 1-K OS=Betula pendula OX=3505 GN=BETV1K PE=1 SV=2) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40 Identity = 87/177 (49.15%), Postives = 114/177 (64.41%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy Swiss-Prot
Match: P45431 (Major pollen allergen Bet v 1-B OS=Betula pendula OX=3505 GN=BETV1B PE=1 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 1.3e-40 Identity = 87/177 (49.15%), Postives = 113/177 (63.84%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy TrEMBL
Match: A0A6J1KZ37 (major allergen Pru ar 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498919 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.3e-67 Identity = 132/176 (75.00%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy TrEMBL
Match: A0A6J1H587 (major allergen Pru ar 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460167 PE=3 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 3.8e-67 Identity = 132/176 (75.00%), Postives = 149/176 (84.66%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy TrEMBL
Match: A0A6J1CDT7 (major allergen Pru ar 1-like OS=Momordica charantia OX=3673 GN=LOC111009801 PE=3 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 4.6e-65 Identity = 125/176 (71.02%), Postives = 150/176 (85.23%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy TrEMBL
Match: A0A6J1CC17 (major allergen Pru ar 1-like OS=Momordica charantia OX=3673 GN=LOC111009841 PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.6e-63 Identity = 124/176 (70.45%), Postives = 145/176 (82.39%), Query Frame = 0
BLAST of Spg025093 vs. ExPASy TrEMBL
Match: A0A5D3BVU0 (Major allergen Pru ar 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00120 PE=3 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 5.7e-63 Identity = 125/176 (71.02%), Postives = 147/176 (83.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|