Spg025077 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025077
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein of unknown function (DUF3511)
Location	scaffold12: 10134495 .. 10134809 (+)
RNA-Seq Expression	Spg025077
Synteny	Spg025077

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCAGAGGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAGTGAGAATCAACAGCGGTTTCCGGCGTCGGCGACGGCGGCATGGAATACGCAGAGCCATTTGCACGGTGGTTCGTCGTTTTCGAATTCCAACGGCGGCGGGTACGATGAACCGGAGGCTAAAAGGCAACGGCGGATTGCCAAGTACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTCATCGTTGA

mRNA sequence

ATGGCTGCCAGAGGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAGTGAGAATCAACAGCGGTTTCCGGCGTCGGCGACGGCGGCATGGAATACGCAGAGCCATTTGCACGGTGGTTCGTCGTTTTCGAATTCCAACGGCGGCGGGTACGATGAACCGGAGGCTAAAAGGCAACGGCGGATTGCCAAGTACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTCATCGTTGA

Coding sequence (CDS)

ATGGCTGCCAGAGGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAGTGAGAATCAACAGCGGTTTCCGGCGTCGGCGACGGCGGCATGGAATACGCAGAGCCATTTGCACGGTGGTTCGTCGTTTTCGAATTCCAACGGCGGCGGGTACGATGAACCGGAGGCTAAAAGGCAACGGCGGATTGCCAAGTACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTAGTGAGCTTCTTCATCGTTGA

Protein sequence

MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR

Homology

[Close]

BLAST of Spg025077 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.1 bits (357), Expect = 2.7e-30
Identity = 76/104 (73.08%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
           MAARG+ E RGG LKSPCRSDTY+ +ENQQ+FPA+ TAA N  SHLHGGS+FS    GG 
Sbjct: 1   MAARGHTE-RGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSK---GGS 60

Query: 61  DEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           DE E KRQ+RIAKYKAYAVESK KAS+R+GIRWVKIKC +LL R
Sbjct: 61  DESEVKRQKRIAKYKAYAVESKFKASIRSGIRWVKIKCGDLLRR 100

[Close]

BLAST of Spg025077 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 6.1e-27
Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
           MAA+GNRE RGG LKSPCRSDTY           +A  AWNT SHLHGGSS   S   G+
Sbjct: 1   MAAKGNRE-RGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSS---SVSNGH 60

Query: 61  DEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           DEPE KRQRRIAKYKAYAVESKLK+SLR+GIRWVKIKC+ELL R
Sbjct: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

[Close]

BLAST of Spg025077 vs. NCBI nr
Match: KAG6593998.1 (hypothetical protein SDJN03_13474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-24
Identity = 67/92 (72.83%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
          MAARG+ E RGG LKSPCRSDTY+ +ENQQ+FPA+ TAA N  SHLHGGS+FS    GG 
Sbjct: 1  MAARGHTE-RGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSK---GGS 60

Query: 61 DEPEAKRQRRIAKYKAYAVESKLKASLRTGIR 93
          DE E KRQ+RIAKYKAYAVESK KAS+R+GIR
Sbjct: 61 DESEVKRQKRIAKYKAYAVESKFKASIRSGIR 88

[Close]

BLAST of Spg025077 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia])

HSP 1 Score: 117.5 bits (293), Expect = 7.0e-23
Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSP--CRSDTYMSSEN-----QQRFPASATAAW-NTQSHLHGGSSF 60
           MA  GNRE RG   KS   C SD Y +  N      QRFP    AAW NT  H+HGGSSF
Sbjct: 1   MATGGNRE-RGSEFKSAYICSSDNYGNEMNGRSQVNQRFP----AAWNNTHGHMHGGSSF 60

Query: 61  SNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           S    GGYDEPEAKRQRRIAKYKAYAVESKLK+S R GIRWVKIKC+++ HR
Sbjct: 61  S----GGYDEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

[Close]

BLAST of Spg025077 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21
Identity = 72/105 (68.57%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSPCRSDTY-MSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGG 60
           MA +GNRE  GG LKS CRSD Y  SS+N QRF A+ T AWNT       SS SN    G
Sbjct: 1   MAGKGNRE-GGGVLKSTCRSDMYTSSSDNPQRFTAAPT-AWNT-------SSVSN----G 60

Query: 61  YDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           +DE E KRQRRIAKYKAYAVESKLK+SLR GIRWVKIK SELLHR
Sbjct: 61  HDEQEVKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

[Close]

BLAST of Spg025077 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-27
Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSPCRSDTYMSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGGY 60
           MAA+GNRE RGG LKSPCRSDTY           +A  AWNT SHLHGGSS   S   G+
Sbjct: 1   MAAKGNRE-RGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSS---SVSNGH 60

Query: 61  DEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           DEPE KRQRRIAKYKAYAVESKLK+SLR+GIRWVKIKC+ELL R
Sbjct: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

[Close]

BLAST of Spg025077 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.4e-23
Identity = 72/112 (64.29%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSP--CRSDTYMSSEN-----QQRFPASATAAW-NTQSHLHGGSSF 60
           MA  GNRE RG   KS   C SD Y +  N      QRFP    AAW NT  H+HGGSSF
Sbjct: 1   MATGGNRE-RGSEFKSAYICSSDNYGNEMNGRSQVNQRFP----AAWNNTHGHMHGGSSF 60

Query: 61  SNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           S    GGYDEPEAKRQRRIAKYKAYAVESKLK+S R GIRWVKIKC+++ HR
Sbjct: 61  S----GGYDEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

[Close]

BLAST of Spg025077 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.4e-22
Identity = 72/105 (68.57%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MAARGNRERRGGALKSPCRSDTY-MSSENQQRFPASATAAWNTQSHLHGGSSFSNSNGGG 60
           MA +GNRE  GG LKS CRSD Y  SS+N QRF A+ T AWNT       SS SN    G
Sbjct: 1   MAGKGNRE-GGGVLKSTCRSDMYTSSSDNPQRFTAAPT-AWNT-------SSVSN----G 60

Query: 61  YDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           +DE E KRQRRIAKYKAYAVESKLK+SLR GIRWVKIK SELLHR
Sbjct: 61  HDEQEVKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

[Close]

BLAST of Spg025077 vs. ExPASy TrEMBL
Match: A0A444CXT1 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=BHM03_00011113 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 5.6e-10
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 48  GGSSFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           G SS S S+   + +PE KR+RR+A YKAYAVE K+KAS+R G RW+KIKCSEL+H
Sbjct: 71  GASSSSRSSAWCFGDPEMKRRRRVASYKAYAVEGKVKASIRKGFRWIKIKCSELIH 126

[Close]

BLAST of Spg025077 vs. ExPASy TrEMBL
Match: M0TP99 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103993342 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.6e-10
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 0


Query: 50  SSFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           SS S S+   + +PE KR+RR+AKYKAYAVE K+K+S+R G RW+KIKCSEL+H
Sbjct: 74  SSSSRSSAWCFGDPEMKRRRRVAKYKAYAVEGKVKSSIRKGFRWIKIKCSELIH 127

[Close]

BLAST of Spg025077 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 60.8 bits (146), Expect = 7.3e-10
Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0


Query: 58  GGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLHR 105
           GG  + E KR++RIA+YKAY VE K+K++L+ G RW+K KC +++HR
Sbjct: 63  GGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHR 109

[Close]

BLAST of Spg025077 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.8 bits (138), Expect = 6.1e-09
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 23  YMSSENQQRFPASATAAWNTQSHL------HGGSSFSNSNGGGYDEPEAKRQRRIAKYKA 82
           Y+  E+++      T  W   S+          SS S    G +++PE KR+RR+AKYK 
Sbjct: 36  YVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKL 95

Query: 83  YAVESKLKASLRTGIRWVKIKCSELLH 104
           Y+ E K+K +LR   +W+KI+CS+++H
Sbjct: 96  YSAEGKMKITLRKSYKWIKIQCSKIIH 122

[Close]

BLAST of Spg025077 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07
Identity = 22/51 (43.14%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 53  SNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           S+S+  G+ +P+ +R++R+  Y+AY VE KLK S R   +W+K KC++LL+
Sbjct: 66  SSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

[Close]

BLAST of Spg025077 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 18/42 (42.86%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 62  EPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           + E KR++RIA YK YA+E K+K++++ G  W+K + S ++H
Sbjct: 68  DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIH 109

[Close]

BLAST of Spg025077 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 46.2 bits (108), Expect = 1.9e-05
Identity = 20/53 (37.74%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 51  SFSNSNGGGYDEPEAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSELLH 104
           S + S   G  +PE +R++R+A YK Y VE K+K S R   RW+K + +++++
Sbjct: 50  SIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVY 102

The following BLAST results are available for this feature:

BLAST of Spg025077 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026338.1	2.7e-30	73.08	hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KGN47400.1	6.1e-27	71.15	hypothetical protein Csa_023055 [Cucumis sativus]	[more]
KAG6593998.1	2.8e-24	72.83	hypothetical protein SDJN03_13474, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022138799.1	7.0e-23	64.29	uncharacterized protein LOC111009876 [Momordica charantia]	[more]
TYK02938.1	1.3e-21	68.57	hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa]	[more]

BLAST of Spg025077 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025077 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCE9	3.0e-27	71.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1	[more]
A0A6J1CB45	3.4e-23	64.29	uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A5D3BVC0	6.4e-22	68.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A444CXT1	5.6e-10	62.50	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=BHM03_00011113 PE=4 SV=...	[more]
M0TP99	9.6e-10	62.96	Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103993...	[more]

BLAST of Spg025077 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47480.1	7.3e-10	53.19	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	6.1e-09	35.63	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	2.0e-07	43.14	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	1.9e-05	42.86	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	1.9e-05	37.74	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 61..103 e-value: 2.9E-21 score: 75.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 27..103
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 27..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025077.1	Spg025077.1	mRNA