Spg025048 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg025048
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold12: 8489084 .. 8493744 (-)
RNA-Seq ExpressionSpg025048
SyntenySpg025048
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGGGGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTGTGAGTTGTGAGAGACTAGAGAGAGATGAAGGAAAGAGAGTGAGAGATAAGACACGGCGTGGCCGCGTGGGTGAAGCAGAGAGAGTGAGAGATGAGAGAAGGCGTGGGTGAAGTGAAGCAGAGAGAGATGAGAGATGGCGTGGGTGTGAGAGATGAGAGGCCGCTGGGTTTTCAAAAATGGAAGAATGAAAAATTCAAAATGTAAATGGCTAGGGTTCTGAGATGAGAAAACTTGGTGGGCTGGGCCTGGGCAATGGGCTGAGAATATGAATTCTAACTAAAAGTATTTTTTTTTAAAAAAATACATATCGGTCGGTCGGTAATATGTAAAATTAATAGATCGACCGACCGACCGATTTGCCAAATGGAAAAACCGACACCGACCGACCAAGTCGGCTAGCCGACCGACCGCCGTCGGTTCGGTCGGTTTCGGTCGGCCGGGTCGGTTTTCGGTTTGAACATGAACACCCCTACCAGGAACCGTTTGGGGTGTGGAAATGGAATGAAACATATACACATGTTTGGTGAGCTGGATTTGGGTGGGGTTGGAATGAAATTGTGGGCATGTGGATTTCATCTATTTCCCACATTTTTGTGGGTCCCATTATTTTCTTCCATTTTTCTTTATAATTTTGATGGGATCCACAATTTCTTTTCTATTTTCTTATAATTTTGGTGGGTCCCACTATTTCTCTCTCCATTAATTCCAACCCAAATCTAGCGCACCAAACACAGACATCATGATTCTTAGGAATCTAGATGCCACCAAAATATTTCCATTGGAATCACATTCCAATCTAATTCCAGCGCACCAAACGGCTAATCAGAGTGACAAAAAAAAAAAAAAAAAAAAAAGCTAAAGAGACCATTTTAATTTTTTTTTTCAAAGTAAATATATTACAAAACAACGGGAGGCGTGAGGTCAAGCACACCAGTAATATATTACCATATCAATTGCAACTCCATACTCACTTTTTTTTTTTGAGAACAACTCCAAACTTACTTAGCATATCAATTTTGTGTAATAACCATTTAATAATCTAAGCTAAAGAGACCCAAACTTAGCATATCAATTTTAATTCCAAACCCTTCAAAACTTATTGTAATGTGACGTTCAGTTAACTTTTTATTTGAATGGCATTAAAATATGTGATAGCATTTCTAATCATATGTTTGTTTATTGTAAGAAATTTGTTGGAGAAATCACTTTTTGAAGAAATCAAACATTCTAGATTGAAAAAGGAAAATCTGAAATTGCTTTGCTTTCATTTTCTACATTTTAACAGGTAAAAACACTACTCTTAACAGCAAAAAAGAAACCCCACAAATTCTTAACTACAAGAAAAAACCAACAAATATTTGAAAAAAAAAACTCCAAAATTGTTTTTCTACATAATCTATTCTTGACAACAGCCAGAAAAACTTCAAAAGTTCTCAACTAGAAAAATTAAAAAATTAATGATCTAAATGAAAAAAAAACTCTAAAATTGTTTTCTAAAGTAGCTAAAAAGTCGATATGTTTGAGGTTAACAATTTTTCAAATAGAAAGTATTCATAGATCTACATTGCAACATTTATGAAATTTGAGGTTAAAATTGATACAATAAGTTTGGTGGTTTAAAATTAATCTTGCTAAGTTTGAGATTCAATTTGATTTTGATTATTCCAAAATTAATTTCAAACATGTCCTAAGAACTTGGAGACAGTTTCATTGGCAATAAGCACTGTCCAACTATAACCTATCTCTTTTTTACAGATGACAGCCTCATTTTCTTCAAAGGTAACAGGGAGGAAGGGGCGTGCATAAAGCTCCTCACACTTACGAGTTAGTGACAGGGCAAAAAATCAATTATGACAAATCCTTTGTATGATGAGTAGGAATACGGACGAGACTATTGTGGATGATATTATCAAAGATTTGGGGGTCAAACAATCGAGCTCCATAGGCAATGTTACCTAGGCCTCCCCGTGGGAAGAATAAAGGATTATGTTCAGCAGGCTTAAGGGGAGAGTTTGGAAGATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCAAAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTAGCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGGTTCTTAGGGACAAATATTTCTCTAGGAATAGTTTCCTAAAAGAGCTAAAGCTAAAGGAAATTATTCTATAGTTTGAAAAAGTATCATTTGGGGGAGATCGCTCCTTGAGAAAGGCTATCGAATCCAGAAATTTACGCCAGGGGGGCACAACTTCATATAAGATTAAATAACTTTAGTCTGTATCCATATAGTTGATGAACTTAAAAAGTGTCTATTAAGTCCTTGATTTTTTTAATTTGTGTCTAATAAATCTCGTAACTTTCAATTTTGTATCTATTAGGTCTCTTTCGTATTTGGAAATTTTAAAAATTAGATGTTATATATTAGACATAAAATTTAATTTTGTATCTAATAGGTCTCATTGCACATTTTTTTTTAAATTAATGTATCTATTAATTCCAACTAAAAGTTTAAGGTTCAATTAGATGCAAAATTTAATTTTATATCTAATGAAATAGTTAATTTTATATATTTTTTTGTTCAACAATTGAGGAGTTGAGTGATTGAATCATTAACTTTTAAGATGATGATTAGTGTCTTTATCTATTGAACTAAGCTCGAATTGGCTGATTTTTAAAAAATTTTGAATATATCTAAAACCTATTATGTTCAAAATAGAAAGTTCGTAGATCAATTAAAATTTTTTAAAAAATTTATAACACAAAACTAGTATAATTGGTCCAAAGTTTACTAAAATTAAAATACTATGTAGAAAAATAAAAATCAAGTATACTAAAAATTATTTATACTCAAAATATCATATGCATTAACATTGAATCGAAATGAAGACTTGGCAACAAGTGTAGTTTGGTGCCCCTACCAATGAGCCAACATAATAGTTTGAAACTTCAGTAGGAAATATAATACATATACATAAAACTCCAAATTTCAGGGGGCAGGCCCCAATGTAAATCCGTCGGTGGCCGCTTCTAATCAAGGAAGATCTTAGAGGCAGAAGAGTTAAAGAAATTTTAAACGAGGACGGCTCGTGGAATGAAGAGATCATCAAGAATGGCTTTCTTCCTGGGGATGCCGATACCATCCTCAATATGCTTAAGAGGAACCTAGCCAAGGAAGATGAAATCATATGGGGCAACACTTGACCGTGCAGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAAGTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGTAACGTTCTCGTTTCTTGTTTCCGTTTCTTCATTTTTAATAAAGAAAAATAGAATTTCATGACCCTAACACCTATACATTCAATAATAATAAACATATATTCTTATTTATGTTTGGAAAAAATTGGAAACAAGAACAAAAAAGGAGAAACTAGTTTTAGTTGTTCCCAAAAATTCTATACAAATTTTGGAGTGTTTCTAAAAAATGAGAAATAAGAAACATACATAGTTATTAAATGCTTTGATTTCTTAATAAAATTGGAAACAAGAAACAAGAAACGAAAACGTTACCAAACGGGCCCTTGATGTGCAGGTCGAAAGTGGAAGACGGTTTCACCTATTCTGGTAGTGCAAAGTGGTAAAGAAAGTTTGGATCAACCTCTTCCCCAACCTTACTCACGTCTTTTCCTCTTGTAGGGACTGGTGGAACTTTAAGGAATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTCAAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGGGTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA

mRNA sequence

ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGGGGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCAAAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTAGCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAAGTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGGACTGGTGGAACTTTAAGGAATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTCAAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGGGTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA

Coding sequence (CDS)

ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGGGGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCAAAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTAGCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAAGTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGGACTGGTGGAACTTTAAGGAATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTCAAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGGGTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA

Protein sequence

MPADRPIGRFGWFFNIILVKEATKNLEQRRECDAEGGETTTTMLKEARRGRPYPTKLERKAYFCRRKRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKRMWKSIWNLECWPKVNDIKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAILEWIKKLTEKIKDYPDLIVPPLLVEPDAAGECKTTWKSRWRSMKLKAWRVWQM
Homology
BLAST of Spg025048 vs. NCBI nr
Match: XP_030495130.1 (uncharacterized protein LOC115710918 [Cannabis sativa])

HSP 1 Score: 87.0 bits (214), Expect = 3.6e-13
Identity = 75/299 (25.08%), Postives = 116/299 (38.80%), Query Frame = 0

Query: 67  KRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA 126
           K NS +G+    G +      +   KE+GGM FR L  FN AMLAK GW++L  P+SL  
Sbjct: 236 KTNSSKGR----GIIWMSWDRLATPKEEGGMGFRHLHDFNLAMLAKQGWQLLCKPDSLAG 295

Query: 127 RLENSNTASRLDIYLS------KRMWKSIWNLECWPKVNDIKKRGINTNLSCLGPVWDWW 186
           R+  +      D   S        +W+SIW  +   ++   +  G  T+   LG  W   
Sbjct: 296 RIYKAKYFPNSDFISSDLGHNPSFVWRSIWGAKDLVRLGVARVIGDGTSTKILGSPWLPS 355

Query: 187 NFKEYWEGAKKSMNKE-------------EAGRVGHLI---------------------- 246
              +Y       ++               +AG V  L                       
Sbjct: 356 TSNKYVSSTHPGLSTHTASSLFTPNMLCWDAGVVRDLFSPQEVDLILNIPLSSTARPDCW 415

Query: 247 -----------------WATWQLRNQIKQSNFKMNPKQLFRELMIKMEQF---QNQFNYL 305
                            WA W+ RN++  +  K   K++     I  E +   QN+   L
Sbjct: 416 SWTAEHNGKFTVKTTLCWALWKARNKVVWNKHKSTVKEVLANSSITFEHWRKAQNKSALL 475

BLAST of Spg025048 vs. NCBI nr
Match: XP_030928675.1 (uncharacterized protein LOC115954851 [Quercus lobata])

HSP 1 Score: 83.2 bits (204), Expect = 5.2e-12
Identity = 73/284 (25.70%), Postives = 121/284 (42.61%), Query Frame = 0

Query: 88  VCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSN---TASRLDIYLSKR 147
           +C SK  GGMDFRD+  FN A+L K  WR++   ++L+ ++ ++      S +D  + ++
Sbjct: 68  LCSSKSIGGMDFRDIQKFNNALLVKQVWRLIHQKDTLLYKVFSAKYFPHGSIMDASVPQK 127

Query: 148 ---MWKS------------IW------NLECW-------PKVNDIKKRGINTNLSCLGP- 207
               W+S            IW       ++ W       P  N I      +++S +   
Sbjct: 128 CSYAWRSILQAREVIEKCAIWRVGSGHGIDVWKHRWLPNPTYNKIVSPRRESSVSRVSEL 187

Query: 208 ------VWDWWNFKEY---WEGAKKS-----------MNKEEAGRVG---HLIWATWQLR 267
                 +WD    +E    WE   K            M K    RV       W+ WQ R
Sbjct: 188 FYPNTRIWDPGKLEENFYPWEAEMKRYRSFRDLLEAVMLKSSQFRVALFCTTAWSLWQRR 247

Query: 268 NQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMD 317
           N++++     N  +L  +    +  F N  NY   S   + ++   W PP +  +K N D
Sbjct: 248 NRLREKQPSWNLHELGSQAKAYVVDFLNA-NY-QPSQVSSWRAQVSWSPPTESVYKGNFD 307

BLAST of Spg025048 vs. NCBI nr
Match: XP_021818901.1 (uncharacterized protein LOC110760860 [Prunus avium])

HSP 1 Score: 83.2 bits (204), Expect = 5.2e-12
Identity = 81/308 (26.30%), Postives = 113/308 (36.69%), Query Frame = 0

Query: 86  QDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYL---- 145
           Q +CM KE GGM FRDL  FN AMLAK GWRI+K P+SL+A           D       
Sbjct: 108 QRLCMMKEAGGMGFRDLRCFNLAMLAKIGWRIIKHPDSLLATTFRDKYFRSSDFMRAVVG 167

Query: 146 --SKRMWKSI------------WN----------LECW-PKVNDIK-----------KRG 205
             S   WK I            W           L+ W PK +  K            +G
Sbjct: 168 CGSSWGWKGIVQGRKILEAGMRWRLGNGHQVHICLDNWVPKPSTFKIYSRHPDMPILVQG 227

Query: 206 INTN-------------LSCLG-------PVWDW-------WN----------------- 265
           +  N              SC+        P+  W       W+                 
Sbjct: 228 LIDNQMKMWNQDLILRCFSCVEAQTILSLPLSRWGCDDKLVWHFTAHGGYTLDVLQLVGE 287

Query: 266 -FKEYWEGA----KKSMNKEEAGRVGHL-IWATWQLRNQIKQSNFKMNPKQLFRELMIKM 297
            F E WE      +K++N +E  +V    +W  W+ RN         +P  + R L  ++
Sbjct: 288 EFSECWESILKKYEKNVNFQEILQVVVFGLWRLWKTRNSAVFEGTVTDPTTMVRSLQAQV 347

BLAST of Spg025048 vs. NCBI nr
Match: CAB4291403.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 82.4 bits (202), Expect = 8.9e-12
Identity = 75/321 (23.36%), Postives = 111/321 (34.58%), Query Frame = 0

Query: 92  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA------------------------- 151
           K+ GG+ FRDL  FN A+LAK GWRIL +P SL+A                         
Sbjct: 27  KKAGGLGFRDLQCFNMALLAKIGWRILHNPSSLLACSLHDKYFVGASFLTATSQKSSSWG 86

Query: 152 -----------------RLENSNTASRLDIYLSKRMWKSIWNLECWPKVNDIKKRGINTN 211
                            R+ +  T           +WKS+W+++  PK+     RG +  
Sbjct: 87  WKGILQGRRLLESGLHWRIGDDTTVQVRSGLAQSSVWKSVWHVDAPPKLKAFIWRGCSNI 146

Query: 212 LS-----------CLGP--------------------VWDWW---------------NFK 271
           L+           C G                        +W               +F 
Sbjct: 147 LAVRHNSHRRSVPCTGECGFCGFQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFI 206

Query: 272 EYWEGAKKSMNKEEAGRVG-----HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQF 318
             W+    ++N  E            +W  W+ RN       + +P +    L+ ++ +F
Sbjct: 207 STWQHMMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQADPTEAVLLLLKQVSEF 266

BLAST of Spg025048 vs. NCBI nr
Match: XP_039791740.1 (uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum])

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-11
Identity = 63/220 (28.64%), Postives = 91/220 (41.36%), Query Frame = 0

Query: 92  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIY------LSKRM 151
           K  GGM FRD+ +FN+AML K  WRIL  P SL AR+           +       S   
Sbjct: 717 KAMGGMGFRDMQIFNQAMLGKQAWRILTVPNSLCARVLKGRYFPCCSFWDASQPRSSSFT 776

Query: 152 WKSI--------WNLE----CWPKVNDIKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSM 211
           W+SI        WN E    C+   N+     I     C  P  D   F  +     ++ 
Sbjct: 777 WRSIMYDGAAGSWNEEMVRACF---NEDDAEKILQIPLCHTPCED---FPAWLHTKSEAA 836

Query: 212 NKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTL 271
              EA      +W  W+ RN ++     M+P+ + +  +  +E F            ++ 
Sbjct: 837 EDHEATVFAITVWHIWESRNAVRNGENMMHPQSIAQRAVAYIEMFLLHVTQPKNQRCESN 896

Query: 272 QSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIG 294
            S   W PP  G   +N+DAA F + +  GVG +IRD  G
Sbjct: 897 FSVSRWTPPPIGRLMLNVDAALFKNPSRIGVGVVIRDHDG 930

BLAST of Spg025048 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0

Query: 86  QDVCMSKE-QGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS 132
           Q +C SKE  GG+ FRDL  FN+A+LAK  +RI+  P +L++RL  S
Sbjct: 45  QKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRS 91

BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A803P5I6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-13
Identity = 75/299 (25.08%), Postives = 116/299 (38.80%), Query Frame = 0

Query: 67   KRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA 126
            K NS +G+    G +      +   KE+GGM FR L  FN AMLAK GW++L  P+SL  
Sbjct: 718  KTNSSKGR----GIIWMSWDRLATPKEEGGMGFRHLHDFNLAMLAKQGWQLLCKPDSLAG 777

Query: 127  RLENSNTASRLDIYLS------KRMWKSIWNLECWPKVNDIKKRGINTNLSCLGPVWDWW 186
            R+  +      D   S        +W+SIW  +   ++   +  G  T+   LG  W   
Sbjct: 778  RIYKAKYFPNSDFISSDLGHNPSFVWRSIWGAKDLVRLGVARVIGDGTSTKILGSPWLPS 837

Query: 187  NFKEYWEGAKKSMNKE-------------EAGRVGHLI---------------------- 246
               +Y       ++               +AG V  L                       
Sbjct: 838  TSNKYVSSTHPGLSTHTASSLFTPNMLCWDAGVVRDLFSPQEVDLILNIPLSSTARPDCW 897

Query: 247  -----------------WATWQLRNQIKQSNFKMNPKQLFRELMIKMEQF---QNQFNYL 305
                             WA W+ RN++  +  K   K++     I  E +   QN+   L
Sbjct: 898  SWTAEHNGKFTVKTTLCWALWKARNKVVWNKHKSTVKEVLANSSITFEHWRKAQNKSALL 957

BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A6P5SYW2 (uncharacterized protein LOC110760860 OS=Prunus avium OX=42229 GN=LOC110760860 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-12
Identity = 81/308 (26.30%), Postives = 113/308 (36.69%), Query Frame = 0

Query: 86  QDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYL---- 145
           Q +CM KE GGM FRDL  FN AMLAK GWRI+K P+SL+A           D       
Sbjct: 108 QRLCMMKEAGGMGFRDLRCFNLAMLAKIGWRIIKHPDSLLATTFRDKYFRSSDFMRAVVG 167

Query: 146 --SKRMWKSI------------WN----------LECW-PKVNDIK-----------KRG 205
             S   WK I            W           L+ W PK +  K            +G
Sbjct: 168 CGSSWGWKGIVQGRKILEAGMRWRLGNGHQVHICLDNWVPKPSTFKIYSRHPDMPILVQG 227

Query: 206 INTN-------------LSCLG-------PVWDW-------WN----------------- 265
           +  N              SC+        P+  W       W+                 
Sbjct: 228 LIDNQMKMWNQDLILRCFSCVEAQTILSLPLSRWGCDDKLVWHFTAHGGYTLDVLQLVGE 287

Query: 266 -FKEYWEGA----KKSMNKEEAGRVGHL-IWATWQLRNQIKQSNFKMNPKQLFRELMIKM 297
            F E WE      +K++N +E  +V    +W  W+ RN         +P  + R L  ++
Sbjct: 288 EFSECWESILKKYEKNVNFQEILQVVVFGLWRLWKTRNSAVFEGTVTDPTTMVRSLQAQV 347

BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A6J5VSP2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-12
Identity = 75/321 (23.36%), Postives = 111/321 (34.58%), Query Frame = 0

Query: 92  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA------------------------- 151
           K+ GG+ FRDL  FN A+LAK GWRIL +P SL+A                         
Sbjct: 27  KKAGGLGFRDLQCFNMALLAKIGWRILHNPSSLLACSLHDKYFVGASFLTATSQKSSSWG 86

Query: 152 -----------------RLENSNTASRLDIYLSKRMWKSIWNLECWPKVNDIKKRGINTN 211
                            R+ +  T           +WKS+W+++  PK+     RG +  
Sbjct: 87  WKGILQGRRLLESGLHWRIGDDTTVQVRSGLAQSSVWKSVWHVDAPPKLKAFIWRGCSNI 146

Query: 212 LS-----------CLGP--------------------VWDWW---------------NFK 271
           L+           C G                        +W               +F 
Sbjct: 147 LAVRHNSHRRSVPCTGECGFCGFQDETQAHIFFECDFARAFWFASPLQLDVSKLAGEDFI 206

Query: 272 EYWEGAKKSMNKEEAGRVG-----HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQF 318
             W+    ++N  E            +W  W+ RN       + +P +    L+ ++ +F
Sbjct: 207 STWQHMMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQADPTEAVLLLLKQVSEF 266

BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A803PZ52 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.6e-12
Identity = 59/228 (25.88%), Postives = 97/228 (42.54%), Query Frame = 0

Query: 87  DVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKRMW 146
           ++C SK  GG+ FR L   N+AM+AK  WR+L +P S +A +  +        Y   R+ 
Sbjct: 293 NLCTSKFFGGLGFRSLVHHNQAMIAKQAWRVLSNPNSTLAAILKAKYFKHTGFY-EARLG 352

Query: 147 KS---IWNLECWPKVNDIKKRGINTNLSCLGPVWDW--------------WNFKEYWEGA 206
            S    W+   W +  D+  +  +  L C      W               + KE+    
Sbjct: 353 HSPSFTWSSLLWGR--DLLSQVTHALLDCSSAAKIWKASPLKHFYVTHRHVDIKEFLISG 412

Query: 207 KKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQ-NQFNYLSRS 266
              +NKE+   +   +WA W LRN+   +N  M+   +   +   +  +   Q N    S
Sbjct: 413 YSHLNKEDLTLLLTTVWAIWNLRNKKLFANLNMSSADVIDWINSYLSDYNAAQLNMRKLS 472

Query: 267 PAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLI 297
           P++ L  HG       G++++N DAA   S    G G +I D  G ++
Sbjct: 473 PSQILHVHGQQKQVNPGYYQLNTDAALCSSQGKLGFGAVINDWHGRIV 517

BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A2YY55 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30282 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11
Identity = 70/283 (24.73%), Postives = 114/283 (40.28%), Query Frame = 0

Query: 88  VCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKR--- 147
           +C  KEQGG+ +RDL LFN AMLA+ GWR++ +P SL A++  +      D+   +    
Sbjct: 243 LCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYFPTGDLMAVREKPG 302

Query: 148 ---MWKS------------IW------NLECWPKV--------NDIKKRG---INTNLSC 207
               W+S            IW      N++ W             I  RG   +N     
Sbjct: 303 ISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLPSGITRRPITPRGRTVVNKVTDL 362

Query: 208 LGPVWDWWNFKE-----YWEGAKKSM------NKEEAGRVG------HLIWATWQLRNQI 267
           + P    W+ KE     +WE   K +         E G+V       HL+W  W  RN+ 
Sbjct: 363 IDPTTGKWD-KELIEGLFWEEDVKQILTIPIRAGVEDGKVTVKTTIFHLLWVWWSARNKA 422

Query: 268 KQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAW 319
                K++  ++   +       +N   +       +++    W  P  G  K+N D A+
Sbjct: 423 NVGEEKLSQGEIEHHVQNTAAYLKNPVLHNKVQSGWSMRKGNTWKAPPPGILKINFDGAY 482

BLAST of Spg025048 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0

Query: 86  QDVCMSKE-QGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS 132
           Q +C SKE  GG+ FRDL  FN+A+LAK  +RI+  P +L++RL  S
Sbjct: 45  QKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRS 91

BLAST of Spg025048 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0

Query: 92  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS---NTASRLDIYLSKR---M 150
           K +GG+ F+D+  FN A+L K  WR+L  PESLMA++  S   + +  L+  L  R   +
Sbjct: 51  KAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFV 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030495130.13.6e-1325.08uncharacterized protein LOC115710918 [Cannabis sativa][more]
XP_030928675.15.2e-1225.70uncharacterized protein LOC115954851 [Quercus lobata][more]
XP_021818901.15.2e-1226.30uncharacterized protein LOC110760860 [Prunus avium][more]
CAB4291403.18.9e-1223.36unnamed protein product [Prunus armeniaca][more]
XP_039791740.11.5e-1128.64uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum][more]
Match NameE-valueIdentityDescription
P932951.4e-0451.06Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A803P5I61.7e-1325.08Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6P5SYW22.5e-1226.30uncharacterized protein LOC110760860 OS=Prunus avium OX=42229 GN=LOC110760860 PE... [more]
A0A6J5VSP24.3e-1223.36Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 S... [more]
A0A803PZ529.6e-1225.88Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A2YY551.3e-1124.73Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30282 PE=4... [more]
Match NameE-valueIdentityDescription
ATMG00310.11.0e-0551.06RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.12.3e-0542.19Ribonuclease H-like superfamily protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg025048.1Spg025048.1mRNA