Spg025048 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGGGGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTGTGAGTTGTGAGAGACTAGAGAGAGATGAAGGAAAGAGAGTGAGAGATAAGACACGGCGTGGCCGCGTGGGTGAAGCAGAGAGAGTGAGAGATGAGAGAAGGCGTGGGTGAAGTGAAGCAGAGAGAGATGAGAGATGGCGTGGGTGTGAGAGATGAGAGGCCGCTGGGTTTTCAAAAATGGAAGAATGAAAAATTCAAAATGTAAATGGCTAGGGTTCTGAGATGAGAAAACTTGGTGGGCTGGGCCTGGGCAATGGGCTGAGAATATGAATTCTAACTAAAAGTATTTTTTTTTAAAAAAATACATATCGGTCGGTCGGTAATATGTAAAATTAATAGATCGACCGACCGACCGATTTGCCAAATGGAAAAACCGACACCGACCGACCAAGTCGGCTAGCCGACCGACCGCCGTCGGTTCGGTCGGTTTCGGTCGGCCGGGTCGGTTTTCGGTTTGAACATGAACACCCCTACCAGGAACCGTTTGGGGTGTGGAAATGGAATGAAACATATACACATGTTTGGTGAGCTGGATTTGGGTGGGGTTGGAATGAAATTGTGGGCATGTGGATTTCATCTATTTCCCACATTTTTGTGGGTCCCATTATTTTCTTCCATTTTTCTTTATAATTTTGATGGGATCCACAATTTCTTTTCTATTTTCTTATAATTTTGGTGGGTCCCACTATTTCTCTCTCCATTAATTCCAACCCAAATCTAGCGCACCAAACACAGACATCATGATTCTTAGGAATCTAGATGCCACCAAAATATTTCCATTGGAATCACATTCCAATCTAATTCCAGCGCACCAAACGGCTAATCAGAGTGACAAAAAAAAAAAAAAAAAAAAAAGCTAAAGAGACCATTTTAATTTTTTTTTTCAAAGTAAATATATTACAAAACAACGGGAGGCGTGAGGTCAAGCACACCAGTAATATATTACCATATCAATTGCAACTCCATACTCACTTTTTTTTTTTGAGAACAACTCCAAACTTACTTAGCATATCAATTTTGTGTAATAACCATTTAATAATCTAAGCTAAAGAGACCCAAACTTAGCATATCAATTTTAATTCCAAACCCTTCAAAACTTATTGTAATGTGACGTTCAGTTAACTTTTTATTTGAATGGCATTAAAATATGTGATAGCATTTCTAATCATATGTTTGTTTATTGTAAGAAATTTGTTGGAGAAATCACTTTTTGAAGAAATCAAACATTCTAGATTGAAAAAGGAAAATCTGAAATTGCTTTGCTTTCATTTTCTACATTTTAACAGGTAAAAACACTACTCTTAACAGCAAAAAAGAAACCCCACAAATTCTTAACTACAAGAAAAAACCAACAAATATTTGAAAAAAAAAACTCCAAAATTGTTTTTCTACATAATCTATTCTTGACAACAGCCAGAAAAACTTCAAAAGTTCTCAACTAGAAAAATTAAAAAATTAATGATCTAAATGAAAAAAAAACTCTAAAATTGTTTTCTAAAGTAGCTAAAAAGTCGATATGTTTGAGGTTAACAATTTTTCAAATAGAAAGTATTCATAGATCTACATTGCAACATTTATGAAATTTGAGGTTAAAATTGATACAATAAGTTTGGTGGTTTAAAATTAATCTTGCTAAGTTTGAGATTCAATTTGATTTTGATTATTCCAAAATTAATTTCAAACATGTCCTAAGAACTTGGAGACAGTTTCATTGGCAATAAGCACTGTCCAACTATAACCTATCTCTTTTTTACAGATGACAGCCTCATTTTCTTCAAAGGTAACAGGGAGGAAGGGGCGTGCATAAAGCTCCTCACACTTACGAGTTAGTGACAGGGCAAAAAATCAATTATGACAAATCCTTTGTATGATGAGTAGGAATACGGACGAGACTATTGTGGATGATATTATCAAAGATTTGGGGGTCAAACAATCGAGCTCCATAGGCAATGTTACCTAGGCCTCCCCGTGGGAAGAATAAAGGATTATGTTCAGCAGGCTTAAGGGGAGAGTTTGGAAGATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCAAAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTAGCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGGTTCTTAGGGACAAATATTTCTCTAGGAATAGTTTCCTAAAAGAGCTAAAGCTAAAGGAAATTATTCTATAGTTTGAAAAAGTATCATTTGGGGGAGATCGCTCCTTGAGAAAGGCTATCGAATCCAGAAATTTACGCCAGGGGGGCACAACTTCATATAAGATTAAATAACTTTAGTCTGTATCCATATAGTTGATGAACTTAAAAAGTGTCTATTAAGTCCTTGATTTTTTTAATTTGTGTCTAATAAATCTCGTAACTTTCAATTTTGTATCTATTAGGTCTCTTTCGTATTTGGAAATTTTAAAAATTAGATGTTATATATTAGACATAAAATTTAATTTTGTATCTAATAGGTCTCATTGCACATTTTTTTTTAAATTAATGTATCTATTAATTCCAACTAAAAGTTTAAGGTTCAATTAGATGCAAAATTTAATTTTATATCTAATGAAATAGTTAATTTTATATATTTTTTTGTTCAACAATTGAGGAGTTGAGTGATTGAATCATTAACTTTTAAGATGATGATTAGTGTCTTTATCTATTGAACTAAGCTCGAATTGGCTGATTTTTAAAAAATTTTGAATATATCTAAAACCTATTATGTTCAAAATAGAAAGTTCGTAGATCAATTAAAATTTTTTAAAAAATTTATAACACAAAACTAGTATAATTGGTCCAAAGTTTACTAAAATTAAAATACTATGTAGAAAAATAAAAATCAAGTATACTAAAAATTATTTATACTCAAAATATCATATGCATTAACATTGAATCGAAATGAAGACTTGGCAACAAGTGTAGTTTGGTGCCCCTACCAATGAGCCAACATAATAGTTTGAAACTTCAGTAGGAAATATAATACATATACATAAAACTCCAAATTTCAGGGGGCAGGCCCCAATGTAAATCCGTCGGTGGCCGCTTCTAATCAAGGAAGATCTTAGAGGCAGAAGAGTTAAAGAAATTTTAAACGAGGACGGCTCGTGGAATGAAGAGATCATCAAGAATGGCTTTCTTCCTGGGGATGCCGATACCATCCTCAATATGCTTAAGAGGAACCTAGCCAAGGAAGATGAAATCATATGGGGCAACACTTGACCGTGCAGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAAGTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGTAACGTTCTCGTTTCTTGTTTCCGTTTCTTCATTTTTAATAAAGAAAAATAGAATTTCATGACCCTAACACCTATACATTCAATAATAATAAACATATATTCTTATTTATGTTTGGAAAAAATTGGAAACAAGAACAAAAAAGGAGAAACTAGTTTTAGTTGTTCCCAAAAATTCTATACAAATTTTGGAGTGTTTCTAAAAAATGAGAAATAAGAAACATACATAGTTATTAAATGCTTTGATTTCTTAATAAAATTGGAAACAAGAAACAAGAAACGAAAACGTTACCAAACGGGCCCTTGATGTGCAGGTCGAAAGTGGAAGACGGTTTCACCTATTCTGGTAGTGCAAAGTGGTAAAGAAAGTTTGGATCAACCTCTTCCCCAACCTTACTCACGTCTTTTCCTCTTGTAGGGACTGGTGGAACTTTAAGGAATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTCAAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGGGTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGGGGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCAAAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTAGCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAAGTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGGACTGGTGGAACTTTAAGGAATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTCAAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGGGTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGGGGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCAAAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTAGCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAAGTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGGACTGGTGGAACTTTAAGGAATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTCAAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGGGTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTTCTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGATTACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGTCTGGCAAATGTGA MPADRPIGRFGWFFNIILVKEATKNLEQRRECDAEGGETTTTMLKEARRGRPYPTKLERKAYFCRRKRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKRMWKSIWNLECWPKVNDIKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAILEWIKKLTEKIKDYPDLIVPPLLVEPDAAGECKTTWKSRWRSMKLKAWRVWQM Homology
BLAST of Spg025048 vs. NCBI nr
Match: XP_030495130.1 (uncharacterized protein LOC115710918 [Cannabis sativa]) HSP 1 Score: 87.0 bits (214), Expect = 3.6e-13 Identity = 75/299 (25.08%), Postives = 116/299 (38.80%), Query Frame = 0
BLAST of Spg025048 vs. NCBI nr
Match: XP_030928675.1 (uncharacterized protein LOC115954851 [Quercus lobata]) HSP 1 Score: 83.2 bits (204), Expect = 5.2e-12 Identity = 73/284 (25.70%), Postives = 121/284 (42.61%), Query Frame = 0
BLAST of Spg025048 vs. NCBI nr
Match: XP_021818901.1 (uncharacterized protein LOC110760860 [Prunus avium]) HSP 1 Score: 83.2 bits (204), Expect = 5.2e-12 Identity = 81/308 (26.30%), Postives = 113/308 (36.69%), Query Frame = 0
BLAST of Spg025048 vs. NCBI nr
Match: CAB4291403.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 82.4 bits (202), Expect = 8.9e-12 Identity = 75/321 (23.36%), Postives = 111/321 (34.58%), Query Frame = 0
BLAST of Spg025048 vs. NCBI nr
Match: XP_039791740.1 (uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum]) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-11 Identity = 63/220 (28.64%), Postives = 91/220 (41.36%), Query Frame = 0
BLAST of Spg025048 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04 Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A803P5I6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.7e-13 Identity = 75/299 (25.08%), Postives = 116/299 (38.80%), Query Frame = 0
BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A6P5SYW2 (uncharacterized protein LOC110760860 OS=Prunus avium OX=42229 GN=LOC110760860 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.5e-12 Identity = 81/308 (26.30%), Postives = 113/308 (36.69%), Query Frame = 0
BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A6J5VSP2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.3e-12 Identity = 75/321 (23.36%), Postives = 111/321 (34.58%), Query Frame = 0
BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A0A803PZ52 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.6e-12 Identity = 59/228 (25.88%), Postives = 97/228 (42.54%), Query Frame = 0
BLAST of Spg025048 vs. ExPASy TrEMBL
Match: A2YY55 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30282 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11 Identity = 70/283 (24.73%), Postives = 114/283 (40.28%), Query Frame = 0
BLAST of Spg025048 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 48.9 bits (115), Expect = 1.0e-05 Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
BLAST of Spg025048 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.3e-05 Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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