Spg025003 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg025003
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RT_RNaseH_2 domain-containing protein
Location	scaffold12: 14451693 .. 14460782 (-)
RNA-Seq Expression	Spg025003
Synteny	Spg025003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGAGAATTTCAATCATAACGCATTCTTTGATGACCCTCTGTTTGAGAATGAGCTAATTGATGTAGAATTGCCTGATTTTGAAAATGAATTAGACATGCTTGCTTTTGAGAATGAAATGTCTGCAATTGATGACTTACCTTCTTTTGAGAATGAATTGGAATTGCCTGAAATTGATAATTTTGAAAATGAAATCGAATTGCCTGATTTGTCTAAGAATGAGCATGATTTGTCTGATAATGTGCGTAATTTGCATGGAGATGACTACTTGATAGATGATAATTCTGAGTCTAATCATGATAATGCTGAATCTATTGAGTCTGATCCAGATGAGTACATAGAATCAGACCCTGAAAGTGTGGATAATGTTGATTCGGGTCCTGATGATGTAGATAGTATAGAATCTGACCCAGAGGAGCTTATATTCTTTAATTCTTCTGACAGTGAGTCATATGATAGCTTAGTTGAATCATTTTTTAATTCTGAGTCTGGGGAATCTTCTGAGCATATAGATTTTATATCTGATGAATGGACTGGCATGGTTGATAGGCCACCTTTAGATCCTAGACCGGTAGATATCATAACGTTTGATGACTCTGTTATCAACTGTTTTGTGAATAGAGATTTAGAAAAGAGATTTGATGCTGCTACATATTTTCTGAAATGTTATTATAACAATCTCTTTAGTGATGATGGGCCAGGGGAAAGTTTTTTTTCTCCCCTGTTTGCAGTGTGCAATTTGGTGCGAGATTTTCTGCAGGGCCCGGAGGATGATGAAAACTTTTATTTCGAGCCTCCGTGATCGTGTTGAGCCTCGTCTAGCTAAAGACGTTAAAGAAAGCGCTGCTTGGGAGGCAACCCAAGGATTTAAGTTTAGGTAGTTGTTTTTGCGGTAAATAATTTTCTTTGCTTCGTGATCAAATTTTGTTTTGCAGGATCACCTTAGCAAATCCCAAAACTCCATGATTCCCATTTTTTTTTAACAAAAGGAAGCGGATGAATCGCTCCTAACTCAGGGAAGTCTCAGTATCCCTCTTTATGCTTTATTGTTCATAAACATTAGGGACAATGTTTAATTTAAGTTTGGGGGGGAGGCTTTCGCTGTGTTGAGCATATCTGAATTCTGTTGGATGCATGAATAGTTAGCTATGATAGCCAAGGATGTGATTTTAGAAGTTTTGGGAGAAAATGGTTTATATGTTGTGGAATCTGGGAGCATAGTAGAAATTGTGAAATTTTAAAATTTTTTGATACTTAATTTTGATGTATAAAGCATGTGAAAGACTTATCTAATGAAGTCTTTAAAAATCTAGATTCTTATTATGATTTTTAAAGTTTGTTGTCACCCTGATAGGCTTAGTTTCTAATATTAGGAAGTTCATGCTTGATTGTTCTAAAGAGCTAGGTAGAAGAAATGCTATGCCTGCTGAGAGAAAAGCAAAAGCAACAAAAGAAAATGAGAGAAAAAGAAAAATCTGTTGAAAAAGAAAATATTTTTGCTTGCACAAAAGAAAAAAGCCTAGGGGTAAAAAGAGCTCCCTGCGGTGTGATCAGTTAGGCCAACCAGAGAATAAAATTCGGGTTAAGGGTCCCTGCACCGTAGTGTGAAAGCTAGTACCATTAGATATCAAAATGCAAGTTTGGGGGAGTAGCAAAAGAAAAAGAAAAAGAAAGTGAAAAATCAATTGAGAGTTTTGCTCTCCCATGAAAAAGAAAAATGACAGGCGCCCTAGTTTCTTTTTTTTTTTTTTTTTTTGAATGATAGAAGAACTCCGACCTATTAGGGGCTCTTAGCCAGTGTAGGGGGAAAGCAAATGGAGAAAGCCATAAGACTAATCTAGGTTAGTAAAAGAATCAATAGATAAGTCTTGAGCATGCTATTCATTAATCTTAAGTTCAAACTATTTTAAGATTTCTTCATGAGTATGCGGTGCTTGCTTATTCCACTTGCATGTTTTCCATTCCATCTTAAAAAATTCCAAAATCATTGAGGCTTGAGTGATTCTATTTCATGCATCTTTAGAATTTATTTTGCTCGGGACTAGCAAAAGCTTAAGCTTGGGGGTGTGATAGCAGACAAAAATGTCGCTATTTTAGTCCCAATTTATTAAGCTTTTTAGTGCTTTAATTGTGTTTTTATTGAAAATATCTAATTTAATTTAGTACTTTGTCCTAAGGAGCAAATTATGGAAATTTGTGGAAAAAAGCCCAAAAAATGAGCAATCCAAGCCAAGTTTCCATACATGGGTCAAGGGGAAGCCCAAGAAGTCATCCATGAGGAAAAGGCCCAAAAAGAATTGAAGTTGGCCCAAGAAATGAAGCCCAGCCCGCGTGGACTGTTCTAGAAATCGCCTAGCGTCGAGACGCTGTAGGGATAGCGTCGATTTCTTGGCCGGCAAGTCGATGACGTCACAGTGTCGCGACACTGTCCATTTTCCAGGCCTATATAACGCGCCCCTTGGAGCCCTTTTTCATCATCAACCATCATTTATTCCTTCATTCTTTTCTTTCTAAGGCTCCTTTGGAGCCTTCTCTCAAAGGCTCTCTAGCCTTTTTTAGAGTTCTTTAGTGGGAAAGTTTTGGGAAGTTTTTGGGGAGCGCTCTAGGAGGCTCAAGGGAAGCTCGGAGGGACTCCAAGTGTCAGCGACGGGGTTTTCGACGGTCATTTCCTTCCCTTTTATTGTGCTTCTATTTATGCTTTCCATTGTAAATTTTGTGAATATTTTAGCTATGTATAGCTAAACCCCAATTTTGGGTCTTGAAATGAAATTATAGTTGAATATTGTTATAATTGCCTATCTCTTGCCCTTTTTCCTAATTATTTGTATGGATGCTCGTAATGCTGTATGCAATCTGGCCAGTTGTATATTGATCTGATTCTTGATGGAGACTCGACGGAGAGAAGTTAGGATAGATCGTAATCCATGCAACTAGTTTAATTGCCCGTCGTGACAACGGGATTAGTTGATTAAACTTAGATTCCTAAAATGAATCAATTAGGGGAGACCGACAGGAGAACATATGTGATTAACGGAGATTCTAGGAGTATAATTAGTTGGGCAATGAGATAGGATAATTATAATAATTATTTAGCTAATAATTGAGTTTCAAGACCCCACTTCCCATTAAAAGCTCTTTCTCCACATTTTATTTTTCTGTGGTTGATCAAATTTCCTCTTTAATTGCTTTAATTTTTTAATTCATTTTAATTGCATGTTTTTTACCCTAGATATTATTTCTCCCAAGTATTTTTAGTGTTCAAGAGTCTTTTTGCTTGCTTAAATTTCGTTTCGCCTCCCTGTGGATTTGATACTCGGTATTACCTACCGTTTTATATTACTTGCGGCCCGTGCACTTTGCGGTCCATCAATAATAAAAATTTTCCATGAATCCATGTGGTTAAAACAGTAACTTAAATTAATTAGGAGATGATTAGGGGCTCTAATTATTCGTTGAAGATCTTTGAGTTAGTGCCCTATTTATACAATCTCCTATCAGGTACGTTTTTCACTCTAATTTTTTATCTAATCTGATGTGATTTTTTTTTCTTTGTGTATTATTATTGTGAGGGAAAAAAAGCTCGAGCAAGGAAAGAAAGAGAGACGAAAGAAGAAGTGCCGGGAGATGAGGATACAATGGAAGAGAGGGTTTAAGAGTTTCGTAGAGACTAAAGAAAAGAAGAAGAGGTCTAAGAAAATAAAAAAAGGAAGAACCCCTACCCTAACCCCTTTTCCTGACCATCTGTTTTTGAAAAAGAAAAGCAGGTAGAGGAAAAACAAGATGAGGGGATTGAAGTTGAGACTGAGAGAGAACTAAGTGAAGAAGTTGAGCTTGATGAAAGATTTTGGAGGTTCATTAATGAAGAGACAAGACAAAAATATCAAGAAGTCCTAAAGCAAAATGTTCTAATGGAGCGCGGCTTCGATGGTGGCAAAAAGCTCCCACATTTTCCTTTAGCGGACATCACTAATCACAGTTGGGAACGGTTGTGCGCAAAGCCGGAGCCCACTGTTGCTGAGCTAGTACGAGAGTTTTACGTCAACATTGATGAAAATAAAGGATTCTTGGTTATTGTTCATGGAGTTGCTCTCGACTGGAGCCCTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCCCAATGATATTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTAAATGCCCAGTGGAGGTTGTCTAGGACAAGGGCAAAAACATTCCAGTCAGCATACCTGAAGTGTGAGGCTAACACTTGGCTCGACTTTATCAAGCAGAGATTATTACCTACAACGTATGACTTCACTATCCCCCGTGATCGAGTGCACTTGAAGGCTCAGAGTCCCAAAGAGTTCCAATAATATAAACTTGTTTGATAAGGGGATTATTGACACTGCCAATCTGGCTAGGCTTCAAAAAGGTGAGGTGTGCCAGGGTGGTTTGTTGTGCGGTGTCCATTGAGTGCTGGAGCAACTTGAGATAGTTCTCAGTAGGCTAGAATTCACTGAGAGACAACTTCAAACCTACTAGAGCTATGATCTTAGAAGGGACACAACACTAAAGAGGCTATGCAAGTGAATTTTTCTAAGCCATATCAAGCCTTCCTAATTTTCCTTGATGATTTTATGAACTCATGCATTTCACCTCGCCCATCATTTGAGAAGAAGAAGAAAACCCAGAGCCTGAACGTAAAGAAGAATTAAAGGGAAGTTTCAGTTTCTTCGAGCAAATATTTTGATGAATGATTTTGTGTTTTCGCCTTGCTTGTCTTTTGTTCTTTCTCCTTATGTTATGTTCTGTTTCTTTTTTTTTTTTATCCGTTGCTTTAAAATCTATCTCTGTCATGATTACGTAAATATGTGATCTTGATCTTTAATGAAATCAAATATTGTTTTGTTTGGCACATCTGAGTATCTAACTTATTTTTCTTCTGAATTTTTGGAAGCTTGGACTAGTTAGCTTAGTTAGATCAAGGTATTCTGATCTCCAGAACCTTTTGCTTGAGCATTCCTTCTTGCCTAGTCATGACTGCTGCAAAAGTTCTGAGGTAGCATTTATTTGTTGATCCACCTTAAGCTTAGTCCAAGTCCCACACTTAGTATACATTGAGAGAAAAAAGTAAGTTTGGGGGAGTTCATTTAAATTTTGAAAATTCATTGAGGACAATGAATAATTTAAGTTTGGGGGACTTAGAGGCACTCCTCTTGTTTGCACCAAGCATTCCTCTCCTTCTTAATTTTTCTAGGTTGTTGAGTAACCAGGGACATTTGTGACACCCATAGTTTGTCTTTGCGTCAAAAGATGGCCTAGCGAAATGCTGGAAGAAAAAAGAGAAAGGAAAAAAAAATGTGTTCAAAAGAAAAGAATTTTACTCAAAATATTGAAAAAAACAAAACTTTTGAAGGATGAATGATGGTCTAGCAGTTTTCTATCTCCCAGGGCTTAGGTGAGCTTCATCATAACATGTCGCCATTTTGAGAAGCAAGGGATAGATAACTAAGGATTTTTTGTGCTTAGCAATGAGTGTTTAGCCTAATTAGTGATAAGCTTGAGGGCAAAGGTATACTGCATCATAAAATGGGTCATCCAATGCATAAGAGTTTATGACTAAAAGGCAACTCTAAGTCTGAAAAACAAAAGAAAAATTCTTCAATTTTATGAAAAATCTTTTAATGTTGCTGGGTTGTGGTAGTTCTTAGGATTCAGTTAAAGGTGGTGATTATTTGTTCAATGCTGAAAGAACTATTTTGCTGCGACAATGCGTGGTTTTGCAGGATGCTCAGGTAAAGGAAGAAGGAAGTGTTGGATTATCTGTTTTAATTAACTTGTCCTATGTCCATGGTTCTGAATTTCTTAGAGAGATGAGTTAGTATTGCTCGGGACGCGCAATGGTTCAAGTTTTGGGGTGTGATAACTCTCCAAAAGGGAGTTATTTATACCTTATTCTATGATGATTTATATCTTAATTGTTCCATTTGGGTGTGATATTAGATGAATATAATGTGTTTTAACCTAATTGAACGAATTGATGCTTTGGAGTTTCTTTTGCAGAAAAATGAAAGCTGACAAGTTTAAGAGAGCAAAGTTGATGATCCAGCAAAATATCAGCAAAACGGGTCACGTGAGCTGCACGTGATTCATTAAATGAGGTGGCGTTTTAAGCATAGATCTCGGACTAATCCGGCTGGGAAGTCACTCCACGTGTCTAAATTAACCTAATTTGGTTAAACCTCATCTTTTAAAAGGAAGAGCCGTCATAGATGAATTGATTCCCGATTGGGAAACTAAATCAATCGGCTGAAGGTCGAGTTGACAGCAGAATGGAAATCTAAGAAGACCAAGTACAATTCCTCTCAAGAAGACGAAGTCCTTCCATGTTCTTGGTGGTTTGGAGCCGCTGTTTCATCCCTAATTGCTAAAAGGATTAGTATTTCTTGTGTATTTTGCATTATGGATGTGCTTATCGAGATTGTAACGTATTTTATGTTTTTAATCATGAACTAATTGCTTTGTAGGCATGGGTTAAGAATTATGTGATTGTTATCTTTATAAAATCTAGAAATTCTATTTGATTATATCATCTTGAGTTATTGTTGTTCTTCAATTTCATTATGTGCCCGCCTAGCTAGCCGATATGTATAGCTTCTCCTAGTTTCAGGGATGATTTAGGAGTTGTGTGGCGATAATTCACGTTAGACCATTATGAGTTGGTGGACGTCAGCAGTTGAACTAGGGATAGTCAATTGCCTAACGCTTGATCGATAGAGCTTCATTGGAGTTGAAACATATTCCAAAAAATCTAGAGTTCCAGGAGGATCCCACTGATAAGACTGCATGAGATTGACTGATCAAAAGAATTGCTGGATCATCTTTATAAACAATTACAGAAGTCTTAACCTATGTCTGTTTCCATTCTGTTTTCTCTAGTCGTAATCATTTACTGCTTTCTTATTTATTTTGTTTCAGCATTTCAAAAACCCAATCAATTTAACCAACCATTTGAAATCACTAAAAAGCCAAATTAAATCAATAGAGGTAGGCAATTTCAAGACCCTGTGGATACGATAAATACTTATCACTAGCTGCTAGATCGTGTATACTTGCACAGTATTTTGAGGTGAATTCTATCTGTAATTTTAATCACTTCAGAATTGCAACAGTGTTCCATTTTCTTGTCGTTTTTCTTTTGAAGATGGCTGGAGAAGAATTGTGTTTACAACTATAAATTCTTCTGTATTCGCTTCGACGTTCTTTCCTTCTTTCTTTAAGTTAGGGAGTAGAAGGTCCTGGTTTTCTCGATTAGCAATACTTAGCTCCATATCGTTGGCGCGAGTTGCTAGTTCTTCAAAGATGTGAGGCTTTATACCTTGAAGGATGTAGAGGAGTTCCCAGTGCATGCCTTGAATGCACATCTCAACAGAAGAGAGTTCAGTAAGACGATCTTTGCAATCTAGACTCATAGCTCTCCAGCGAATTATATAGTTAACAACGAGTTCACCTTTTTGTTGTTTAGTGTTGGTGAGCTAAAACATGATAATGGTTCGTCTAATGCTGTAGAAGCGATTCAAAAACTCTCTTTCGAATTCCTCCCAACTGTCTTGTTCATGACAACGACCATTGAGGAAGTCTGGAACGACATGTTTACACTTGTGTTTTGAGATAAGAGAGAGATGAGAGGTAGAGATGGTCCCACTAGGCGTGCCAATTTGTTCACATGTAACTTCGAAGATGGGACACGTGGAATAAAATATATATTTGTATTGATGTAATATGTGTGTGAGTGTACAATCTCTAACTTTAATCCTCTGATTCTCTCTCTTGTGTGTGTGTTGGTTTCACTCGAGGGCGGTAGCGCTTGTTCTCGAGTCTGAAGCTTCAATTGATTCTTTGAGCTTTTGAAGTCTTGGAGTCTTGAAAAGTCTTTGGTCTTCATGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGTTCTTAAAGTCTTGAAGAGTCTTTGGTCTTCAAAGATTGTTGAAGTCTTCTAGTCTTGAAAGGTCTTCAGTCTTCAAGAAGTCTTGGGGTCTTGAAGTCTTGAAGCCTTGGAGTCTTGAAATCTTGAAGAGTCTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTCAGTCTTCAAAAAGTCTTGGGGTCTTGAAGCCTTGAAGAGTTTTTGGTTTTCAAAAATTGTTGAAGTCTTCTAGTCTTGAGAGGTCTTCAGTCTTCAAGAAGTCTTGAAGAGTCTTTCTCTGGATTCTTTGACTCTGGCTATAAGCTTCCAAAATTCTGATCCCTTGAAATGGAGGAGAAGCTCTCTATTTATAGAGTTCTCCATTGATGGGCCCTGGTGACTTTTGGGCCTAACAACTTGGGCTTCGGCTTTATTGGTCTTGGGTTCAACTATTTGGTTTTGGGTCTGGTTTATATTTGACCCAAATATTTAAAAGACCCGAAATTGATCCAATTAATTTTTTTTAATTAATTGGTCAAATTTATCAATTTAATCAAAATAATTTATTTTTAATTAATTGATCAAATGGGCATTTGACTTTAAAAAATTATAATTGGCTAACTTTGTCTTCAAATTAAATTTGGGACACATGTCAATTTATAATTGGTCCCAAATTTAATTATTTATAATTTCGTCATTAATTTTAAGTAATGACGTGGCAATCTGTCATTGGCCAAAATTTCTCCTTCAACAGCATCATGTCGACAACTTATGATGCGACGCTGGCGCTGCAAAGAGTCACCCTCTGCCATTGCATCATGAGGGGCATTGTGATCGACTAGGGGAAAATCATTGTTGAAGGCCTTCACGCAACAACCTTCAAACCCTGCGGCGCAATGTGTTGCTCGGGTATGGTAACGCAGCTTTGCCTGCAGTCAAGAGTCAACCCTACGCCAGAGAAGGAAAGGCAGCCAATCCGCCAGATGTTTGATGGGTGCTGGCTGACGCGCATAAAAGCCAACGTCAATAGTAGAATTATAGCCCCCGCGTCAATGCTAGAAGAAGCGCTTGCGGCAGAGAACCCTTAG

mRNA sequence

ATGGATGATGAGAATTTCAATCATAACGCATTCTTTGATGACCCTCTGTTTGAGAATGAGCTAATTGATGTAGAATTGCCTGATTTTGAAAATGAATTAGACATGCTTGCTTTTGAGAATGAAATGTCTGCAATTGATGACTTACCTTCTTTTGAGAATGAATTGGAATTGCCTGAAATTGATAATTTTGAAAATGAAATCGAATTGCCTGATTTGTCTAAGAATGAGCATGATTTGTCTGATAATGTGCGTAATTTGCATGGAGATGACTACTTGATAGATGATAATTCTGAGTCTAATCATGATAATGCTGAATCTATTGAGTCTGATCCAGATGAGTACATAGAATCAGACCCTGAAAGTGTGGATAATGTTGATTCGGGTCCTGATGATGTAGATAGTATAGAATCTGACCCAGAGGAGCTTATATTCTTTAATTCTTCTGACAGTGAGTCATATGATAGCTTAGTTGAATCATTTTTTAATTCTGAGTCTGGGGAATCTTCTGAGCATATAGATTTTATATCTGATGAATGGACTGGCATGGTTGATAGGCCACCTTTAGATCCTAGACCGGTAGATATCATAACGTTTGATGACTCTGTAGAGGAAAAACAAGATGAGGGGATTGAAGTTGAGACTGAGAGAGAACTAAGTGAAGAAGTTGAGCTTGATGAAAGATTTTGGAGGTTCATTAATGAAGAGACAAGACAAAAATATCAAGAAGTCCTAAAGCAAAATGTTCTAATGGAGCGCGGCTTCGATGGTGGCAAAAAGCTCCCACATTTTCCTTTAGCGGACATCACTAATCACAGTTGGGAACGGTTGTGCGCAAAGCCGGAGCCCACTGTTGCTGAGCTAGTACGAGAGTTTTACGTCAACATTGATGAAAATAAAGGATTCTTGGTTATTGTTCATGGAGTTGCTCTCGACTGGAGCCCTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCCCAATGATATTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTAAATGCCCAGTGGAGGCTCAGAGTCCCAAAGAGTTCCAATAATATAAACTTGTTTGATAAGGGGATTATTGACACTGCCAATCTGGCTAGGCTTCAAAAAGGTGAGCTTGGACTAGTTAGCTTAGTTAGATCAAGGTATTCTGATCTCCAGAACCTTTTGCTTGAGCATTCCTTCTTGCCTAGTCATGACTGCTGCAAAAGTTCTGAGGATTCAGTTAAAGGTGGTGATTATTTGTTCAATGCTGAAAGAACTATTTTGCTGCGACAATGCGTGGTTTTGCAGGATGCTCAGGGGAAAATCATTGTTGAAGGCCTTCACGCAACAACCTTCAAACCCTGCGGCGCAATGTGTTGCTCGGGTATGGTAACGCAGCTTTGCCTGCAGTCAAGAGTCAACCCTACGCCAGAGAAGGAAAGGCAGCCAATCCGCCAGATGTTTGATGGGTGCTGGCTGACGCGCATAAAAGCCAACGTCAATAGTAGAATTATAGCCCCCGCGTCAATGCTAGAAGAAGCGCTTGCGGCAGAGAACCCTTAG

Coding sequence (CDS)

ATGGATGATGAGAATTTCAATCATAACGCATTCTTTGATGACCCTCTGTTTGAGAATGAGCTAATTGATGTAGAATTGCCTGATTTTGAAAATGAATTAGACATGCTTGCTTTTGAGAATGAAATGTCTGCAATTGATGACTTACCTTCTTTTGAGAATGAATTGGAATTGCCTGAAATTGATAATTTTGAAAATGAAATCGAATTGCCTGATTTGTCTAAGAATGAGCATGATTTGTCTGATAATGTGCGTAATTTGCATGGAGATGACTACTTGATAGATGATAATTCTGAGTCTAATCATGATAATGCTGAATCTATTGAGTCTGATCCAGATGAGTACATAGAATCAGACCCTGAAAGTGTGGATAATGTTGATTCGGGTCCTGATGATGTAGATAGTATAGAATCTGACCCAGAGGAGCTTATATTCTTTAATTCTTCTGACAGTGAGTCATATGATAGCTTAGTTGAATCATTTTTTAATTCTGAGTCTGGGGAATCTTCTGAGCATATAGATTTTATATCTGATGAATGGACTGGCATGGTTGATAGGCCACCTTTAGATCCTAGACCGGTAGATATCATAACGTTTGATGACTCTGTAGAGGAAAAACAAGATGAGGGGATTGAAGTTGAGACTGAGAGAGAACTAAGTGAAGAAGTTGAGCTTGATGAAAGATTTTGGAGGTTCATTAATGAAGAGACAAGACAAAAATATCAAGAAGTCCTAAAGCAAAATGTTCTAATGGAGCGCGGCTTCGATGGTGGCAAAAAGCTCCCACATTTTCCTTTAGCGGACATCACTAATCACAGTTGGGAACGGTTGTGCGCAAAGCCGGAGCCCACTGTTGCTGAGCTAGTACGAGAGTTTTACGTCAACATTGATGAAAATAAAGGATTCTTGGTTATTGTTCATGGAGTTGCTCTCGACTGGAGCCCTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCCCAATGATATTTTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTAAATGCCCAGTGGAGGCTCAGAGTCCCAAAGAGTTCCAATAATATAAACTTGTTTGATAAGGGGATTATTGACACTGCCAATCTGGCTAGGCTTCAAAAAGGTGAGCTTGGACTAGTTAGCTTAGTTAGATCAAGGTATTCTGATCTCCAGAACCTTTTGCTTGAGCATTCCTTCTTGCCTAGTCATGACTGCTGCAAAAGTTCTGAGGATTCAGTTAAAGGTGGTGATTATTTGTTCAATGCTGAAAGAACTATTTTGCTGCGACAATGCGTGGTTTTGCAGGATGCTCAGGGGAAAATCATTGTTGAAGGCCTTCACGCAACAACCTTCAAACCCTGCGGCGCAATGTGTTGCTCGGGTATGGTAACGCAGCTTTGCCTGCAGTCAAGAGTCAACCCTACGCCAGAGAAGGAAAGGCAGCCAATCCGCCAGATGTTTGATGGGTGCTGGCTGACGCGCATAAAAGCCAACGTCAATAGTAGAATTATAGCCCCCGCGTCAATGCTAGAAGAAGCGCTTGCGGCAGAGAACCCTTAG

Protein sequence

MDDENFNHNAFFDDPLFENELIDVELPDFENELDMLAFENEMSAIDDLPSFENELELPEIDNFENEIELPDLSKNEHDLSDNVRNLHGDDYLIDDNSESNHDNAESIESDPDEYIESDPESVDNVDSGPDDVDSIESDPEELIFFNSSDSESYDSLVESFFNSESGESSEHIDFISDEWTGMVDRPPLDPRPVDIITFDDSVEEKQDEGIEVETERELSEEVELDERFWRFINEETRQKYQEVLKQNVLMERGFDGGKKLPHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGELGLVSLVRSRYSDLQNLLLEHSFLPSHDCCKSSEDSVKGGDYLFNAERTILLRQCVVLQDAQGKIIVEGLHATTFKPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTRIKANVNSRIIAPASMLEEALAAENP

Homology

[Close]

BLAST of Spg025003 vs. NCBI nr
Match: PON85987.1 (hypothetical protein TorRG33x02_181920, partial [Trema orientale])

HSP 1 Score: 68.2 bits (165), Expect = 2.4e-07
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 230 RFINEETRQKYQE-VLKQNVLMERGF--DGGKKLPHFP-LADITN-HSWERLCAKPEPTV 289
           +F  EE   +Y+E + KQ +  E+GF  +  + +   P +A + N H+W + CA PE  +
Sbjct: 47  KFETEEAETRYEENIQKQPLNAEKGFLLNNSETMGQQPFIAQVINQHNWRQFCAHPEDPI 106

Query: 290 AELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQL 344
             LVREFY N+ + +   V V GV + W+   IN++F L D P D  +E +   + ++L
Sbjct: 107 VPLVREFYANLTDPEEDTVYVRGVQVPWTEEAINTVFGLGD-PVDEHSEFVADITEQEL 164

[Close]

BLAST of Spg025003 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii])

HSP 1 Score: 64.3 bits (155), Expect = 3.5e-06
Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 233 NEETRQKYQEVLKQNVL-MERGF--DGGKKLPHFPLAD--ITNHSWERLCAKPEPTVAEL 292
           +E    +Y+E ++   L  E+GF  D  K L   P  +  IT H+W+  CA PE  +A L
Sbjct: 18  SEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNWQLFCAHPEDLIAPL 77

Query: 293 VREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQL 344
           VREFY N+       V V GV +  S   IN+++ L D P D  +E + A +  +L
Sbjct: 78  VREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGD-PVDEHSEFVEAITEPEL 132

[Close]

BLAST of Spg025003 vs. NCBI nr
Match: PON65868.1 (hypothetical protein PanWU01x14_113570 [Parasponia andersonii])

HSP 1 Score: 63.5 bits (153), Expect = 6.0e-06
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 230 RFINEETRQKYQEVLKQNVL-MERGF--DGGKKL--PHFPLADITNHSWERLCAKPEPTV 289
           +F +E    +Y+E ++   L  E+GF  D  K L  P F    IT H+W+  CA PE  +
Sbjct: 15  KFKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIADVITQHNWQLFCAHPEDPI 74

Query: 290 AELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQL 344
             LVREFY N+       V V GV +  S   IN+++ L D P D  +E + A +  +L
Sbjct: 75  VPLVREFYANMTNPDDDTVYVRGVQVLLSSEAINTIYGLGD-PIDEHSEFVEAITEPEL 132

[Close]

BLAST of Spg025003 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale])

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-05
Identity = 36/101 (35.64%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 230 RFINEETRQKYQEVLKQNVL-MERGFDGGKK----LPHFPLADITNHSWERLCAKPEPTV 289
           +F +E    +Y+E +K   L  E+GF          P F    I  H+W+  CA  E  +
Sbjct: 15  KFDSEAAEARYEEHIKNQPLGAEKGFAWNNNEPLGQPPFIADVIIQHNWQLFCAHHEDPI 74

Query: 290 AELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQD 326
             LVREFY N+ + +   V V GV + WS   IN+LF L D
Sbjct: 75  VPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGLGD 115

[Close]

BLAST of Spg025003 vs. NCBI nr
Match: XP_004514776.1 (uncharacterized protein LOC101493401 isoform X3 [Cicer arietinum])

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-05
Identity = 70/286 (24.48%), Postives = 118/286 (41.26%), Query Frame = 0


Query: 228 FWRFINEETRQKYQEVLK-QNVLMERGFDGGKKLPHFPL-----ADITNHSWERLCAKPE 287
           F +FIN++T+ K+  ++K +N  +E GF      P + L     + I  H+W+       
Sbjct: 72  FPKFINKQTQNKHDNLIKHRNFHLELGFSLNNNEPLYGLPIKLASTIDKHNWKTFVNHSG 131

Query: 288 PTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNE 347
              A +VREFY  I E K   V+V GV + ++P  +N  FNL         + L  + N+
Sbjct: 132 NPYASIVREFYSCILERKQNFVLVRGVRVCFTPKTLNFHFNL--------IKDLKCNDND 191

Query: 348 QLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGE-------LGLVSLVRSRYSDLQN 407
            ++    L+   S   +N   K +       + +KG+       L L ++ +  Y  +  
Sbjct: 192 VVDEYQCLKNTVSDEKLNSIMKTLTVRGTNWKTEKGKNVWKIPFLALKAIPKVWYRLICT 251

Query: 408 LLLEHSFLPSHDCCKSSEDSVKGGDYLFNAERTILLRQCVV--LQDAQGKIIVEGLHATT 467
            LL +S   S D                  +  +LL  CVV       GKII + + A  
Sbjct: 252 KLLPNSNFQSVD------------------KDRLLLLYCVVEGFSINVGKIIYDEIIACA 311

Query: 468 F--KPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTR 497
           F  K    +    +++ LC+++ V    + E    R+    C L R
Sbjct: 312 FKKKKKERLLFPSLISDLCVRNGVRVEDDDEVVINREAIGLCDLER 331

[Close]

BLAST of Spg025003 vs. ExPASy TrEMBL
Match: A0A2P5EK98 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_181920 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-07
Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 230 RFINEETRQKYQE-VLKQNVLMERGF--DGGKKLPHFP-LADITN-HSWERLCAKPEPTV 289
           +F  EE   +Y+E + KQ +  E+GF  +  + +   P +A + N H+W + CA PE  +
Sbjct: 47  KFETEEAETRYEENIQKQPLNAEKGFLLNNSETMGQQPFIAQVINQHNWRQFCAHPEDPI 106

Query: 290 AELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQL 344
             LVREFY N+ + +   V V GV + W+   IN++F L D P D  +E +   + ++L
Sbjct: 107 VPLVREFYANLTDPEEDTVYVRGVQVPWTEEAINTVFGLGD-PVDEHSEFVADITEQEL 164

[Close]

BLAST of Spg025003 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-06
Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 233 NEETRQKYQEVLKQNVL-MERGF--DGGKKLPHFPLAD--ITNHSWERLCAKPEPTVAEL 292
           +E    +Y+E ++   L  E+GF  D  K L   P  +  IT H+W+  CA PE  +A L
Sbjct: 18  SEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIEDVITQHNWQLFCAHPEDLIAPL 77

Query: 293 VREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQL 344
           VREFY N+       V V GV +  S   IN+++ L D P D  +E + A +  +L
Sbjct: 78  VREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYGLGD-PVDEHSEFVEAITEPEL 132

[Close]

BLAST of Spg025003 vs. ExPASy TrEMBL
Match: A0A2P5CXV1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-06
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 230 RFINEETRQKYQEVLKQNVL-MERGF--DGGKKL--PHFPLADITNHSWERLCAKPEPTV 289
           +F +E    +Y+E ++   L  E+GF  D  K L  P F    IT H+W+  CA PE  +
Sbjct: 15  KFKSEAAETRYEENIQNRPLSAEKGFVGDNSKPLEKPPFIADVITQHNWQLFCAHPEDPI 74

Query: 290 AELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNEQL 344
             LVREFY N+       V V GV +  S   IN+++ L D P D  +E + A +  +L
Sbjct: 75  VPLVREFYANMTNPDDDTVYVRGVQVLLSSEAINTIYGLGD-PIDEHSEFVEAITEPEL 132

[Close]

BLAST of Spg025003 vs. ExPASy TrEMBL
Match: A0A2P5EYL5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.5e-06
Identity = 36/101 (35.64%), Postives = 50/101 (49.50%), Query Frame = 0


Query: 230 RFINEETRQKYQEVLKQNVL-MERGFDGGKK----LPHFPLADITNHSWERLCAKPEPTV 289
           +F +E    +Y+E +K   L  E+GF          P F    I  H+W+  CA  E  +
Sbjct: 15  KFDSEAAEARYEEHIKNQPLGAEKGFAWNNNEPLGQPPFIADVIIQHNWQLFCAHHEDPI 74

Query: 290 AELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQD 326
             LVREFY N+ + +   V V GV + WS   IN+LF L D
Sbjct: 75  VPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGLGD 115

[Close]

BLAST of Spg025003 vs. ExPASy TrEMBL
Match: A0A1S2Z475 (uncharacterized protein LOC101493401 isoform X3 OS=Cicer arietinum OX=3827 GN=LOC101493401 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-05
Identity = 70/286 (24.48%), Postives = 118/286 (41.26%), Query Frame = 0


Query: 228 FWRFINEETRQKYQEVLK-QNVLMERGFDGGKKLPHFPL-----ADITNHSWERLCAKPE 287
           F +FIN++T+ K+  ++K +N  +E GF      P + L     + I  H+W+       
Sbjct: 72  FPKFINKQTQNKHDNLIKHRNFHLELGFSLNNNEPLYGLPIKLASTIDKHNWKTFVNHSG 131

Query: 288 PTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDIFNEILVASSNE 347
              A +VREFY  I E K   V+V GV + ++P  +N  FNL         + L  + N+
Sbjct: 132 NPYASIVREFYSCILERKQNFVLVRGVRVCFTPKTLNFHFNL--------IKDLKCNDND 191

Query: 348 QLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGE-------LGLVSLVRSRYSDLQN 407
            ++    L+   S   +N   K +       + +KG+       L L ++ +  Y  +  
Sbjct: 192 VVDEYQCLKNTVSDEKLNSIMKTLTVRGTNWKTEKGKNVWKIPFLALKAIPKVWYRLICT 251

Query: 408 LLLEHSFLPSHDCCKSSEDSVKGGDYLFNAERTILLRQCVV--LQDAQGKIIVEGLHATT 467
            LL +S   S D                  +  +LL  CVV       GKII + + A  
Sbjct: 252 KLLPNSNFQSVD------------------KDRLLLLYCVVEGFSINVGKIIYDEIIACA 311

Query: 468 F--KPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTR 497
           F  K    +    +++ LC+++ V    + E    R+    C L R
Sbjct: 312 FKKKKKERLLFPSLISDLCVRNGVRVEDDDEVVINREAIGLCDLER 331

The following BLAST results are available for this feature:

BLAST of Spg025003 vs. NCBI nr


Match Name	E-value	Identity	Description
PON85987.1	2.4e-07	33.61	hypothetical protein TorRG33x02_181920, partial [Trema orientale]	[more]
PON42276.1	3.5e-06	35.34	hypothetical protein PanWU01x14_283280 [Parasponia andersonii]	[more]
PON65868.1	6.0e-06	35.29	hypothetical protein PanWU01x14_113570 [Parasponia andersonii]	[more]
PON90635.1	1.3e-05	35.64	hypothetical protein TorRG33x02_134920 [Trema orientale]	[more]
XP_004514776.1	3.0e-05	24.48	uncharacterized protein LOC101493401 isoform X3 [Cicer arietinum]	[more]

BLAST of Spg025003 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5EK98	1.2e-07	33.61	Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_181...	[more]
A0A2P5B0K0	1.7e-06	35.34	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE...	[more]
A0A2P5CXV1	2.9e-06	35.29	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE...	[more]
A0A2P5EYL5	6.5e-06	35.64	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV...	[more]
A0A1S2Z475	1.4e-05	24.48	uncharacterized protein LOC101493401 isoform X3 OS=Cicer arietinum OX=3827 GN=LO...	[more]

BLAST of Spg025003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg025003.1	Spg025003.1	mRNA