Spg024995 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024995
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Gag-pro-like protein
Location	scaffold12: 10104677 .. 10107226 (-)
RNA-Seq Expression	Spg024995
Synteny	Spg024995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAACTGGAGAGAGAATCGAGTACGGAATTAAGCATGGAAAGATAACTGATACGGCTGGATCATCGACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGGGAAGTTCAGATGATTGGTTTTAATTCAAGACAACCATACCCTAATGCCGGAGTGCCACAATATCACTATCCACCTCCATATGTTTACCCTCAACCCTATATCAATAATACGTCAGCCCAATACTCATCCCCTTACGTCCAAAATCATCGTCCTACTCAATGCTACCAGCCTCGGAATCAACAGAACACTCCTTATGTCCAAGGACACCAAAACAATAAAAGCGTCCGTAGACAGACTCATTTTGATACGATTCCAATGACATATACCGAACTTCTACCCCAACTCTTCCAGAATAATCAGCTGGCACCCGTGCCAATGGACCAAGTAAAGCCACCTTACCCAAAATGGTATGACCCAAATGCCAATTGCGACTACCATGCAGGAGCAATTGGACATTCCACTGAAAACTGTACTGCACTCAAGCATAGGGTGCAAGCATTGATCAAGGCAAGATGGTTGAACATTAAGAAAGAAAATGGTCCAGATGTCAACAACAATCCTCTGCCAAACCATCAGAATGCACAAGTAAATGCGATAGAGGTTCGTGGAACTGATTTGAAAAAGAATGCTAAGAGCGTAGTGACTCCCATGGGAGAACTATTCGAAATATTATTCAGTAATGGATACATTGGTGTAGAACGCCCCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAGCTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGCTCAAGGTTTTCTCTCAAGCCAAAACTGTTAACAATATCTTATCGCGAGAAGCCCAGTACCCCAAATTCCAAGCCAAGACCGATTACCATCCAGATTCCGACTCCCTTTGAATATCAAAGTTCAAAAGCAGTACCTTGGAACTATGAATACAAGGTAACTGTTGGTTCTGAACCCCTTCCAATCCATAATATCAGTGGGATAGGAGGTCTAACACGAAGCGGGAAGTGTTATACACCAGAAGACTTATTGAAACCCAAGGGTAAAGAAAAAGGAAAGGCCAAGATCACTGAAGATATCAAGGAAAAAACAGAAGAGCCCATTGCAGTGAAGAACCTGGATGTTAAACAGCCAGCATCTGAAGAGGACATCCAAGAATTTTTAAAGTTGGTTAAGCAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCCCTGCAAAGATTTCCATACTGGCTTTGTTATTGGCTTCAGATACGCATCGTAGGACCTTGTTGGACATATTGAATCAAACTTATGTTCCGCAGGATATTACGGTGGACAACTTGGATAACATCGTTGGAAACATAACTGCATCCAGTTCAGTAACTTTCACAGATGATGAGTTACCACCAGAAGGCACCGGACACACTAATGCCTTGCACATTACAGTTAAGTGCAAAAAATTTGTTGTGGCAAAAGTTTTAGTTGATAATGGTTCCTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGATATATCTCATGTAAGACCCAGTACTATGATCGTACGAGCTTTTGATGGGGCACGTGGTGAAGTTGTTGGAGACATAGAAGTGCCCATTCAGATAGGTCCATGCACCTTCGATATAACCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTTAGGGCGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAACTTAAATTTGTGGTCAACCGCAAACTAGTGATCATATCTGGACAAGAGGATATCTTAGTGTCAAGACCCTCCTCAATGCCCTACATTGAAGCAGCAGAAGAGGTTTTTGAGTCATCATTTCAAGCTTTTGAGATTGCGAATGCCACAACTTTGTACGGAGAGATAGGGAAAATGGAGCTGCAACTTTCAAAACTCTCCTTAACAGGAAGCAACCAAAGCCTCGAAAATTTGCTAAATATGTCGAAAAATATGAAGAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCCGTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAGTCATGGCTATAATCGAACAGAAGAAAGAAGCTGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA

mRNA sequence

ATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAACTGGAGAGAGAATCGAGTACGGAATTAAGCATGGAAAGATAACTGATACGGCTGGATCATCGACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGGGAAAGCGTAGTGACTCCCATGGGAGAACTATTCGAAATATTATTCAGTAATGGATACATTGGTGTAGAACGCCCCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAGCTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGCTCAAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCCGTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAGTCATGGCTATAATCGAACAGAAGAAAGAAGCTGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA

Coding sequence (CDS)

ATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAACTGGAGAGAGAATCGAGTACGGAATTAAGCATGGAAAGATAACTGATACGGCTGGATCATCGACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGGGAAAGCGTAGTGACTCCCATGGGAGAACTATTCGAAATATTATTCAGTAATGGATACATTGGTGTAGAACGCCCCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCATTCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAGCTCCCTCAGTATGGGGAAGTTGATATTATAGAAGAATGCTCAAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCCGTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAGTCATGGCTATAATCGAACAGAAGAAAGAAGCTGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA

Protein sequence

MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKEGESVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK

Homology

[Close]

BLAST of Spg024995 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28
Identity = 91/245 (37.14%), Postives = 111/245 (45.31%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKK 60
           MFINTLK PFYD+MIGSASTNFSDIMT GERIEYG++H +IT TA     AKKA  SKKK
Sbjct: 298 MFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKK 357

Query: 61  EGE--------------------------------------------------------- 120
           EGE                                                         
Sbjct: 358 EGELTPVPVDPIQPLYPRWYDANARCDYHAGAIGHSTENCTALKYRVQALLKAGWLNFKK 417

Query: 121 ----------------------------------SVVTPMGELFEILFSNGYIGVERPQL 154
                                              + TP  ELFEIL  +GY+ VE    
Sbjct: 418 ENEPDVSKNPLSNHQNVQINAIECQGIESKSKVADIRTPKEELFEILLGSGYVSVEYLCP 477

[Close]

BLAST of Spg024995 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-28
Identity = 91/263 (34.60%), Postives = 114/263 (43.35%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKK 60
           MFINTLK PFYD+M+GSASTNFSDIM  GERIEYG++HG+IT TA     AKK   SKKK
Sbjct: 240 MFINTLKHPFYDRMVGSASTNFSDIMAIGERIEYGVRHGRITSTADEPLAAKKTSHSKKK 299

Query: 61  EGE--------------------------------------------------------- 120
           EGE                                                         
Sbjct: 300 EGELAHVPVDPIQPPYPRWCDANARCDYHTGAIGHSIENCTALKYRVQALIKAGWLNFKK 359

Query: 121 ----------------------------------SVVTPMGELFEILFSNGYIGVERPQL 172
                                              + TPM ELFEIL  +GY+ VE    
Sbjct: 360 ENGPBVSNNPLPNHXNVQINAIECQEIESKSKVADITTPMEELFEILLGSGYVSVEYLCP 419

[Close]

BLAST of Spg024995 vs. NCBI nr
Match: XP_022131653.1 (uncharacterized protein LOC111004780 [Momordica charantia])

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-26
Identity = 77/197 (39.09%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKK-------- 60
           MFINTLK PFYD+MIGSASTNFS+IMT GE IEYG+KHG+IT T     A K        
Sbjct: 45  MFINTLKHPFYDRMIGSASTNFSNIMTIGETIEYGVKHGQITSTTEELLAAKRQVIPRRK 104

Query: 61  --------------------------------------------------AVPSKKKEGE 120
                                                              + SK K G+
Sbjct: 105 LAPVPVDLIQPPYPRWYDVNARCDYHAGAIGHSTKNCTALKYRVQALIRVGIESKSKVGD 164

Query: 121 SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKV 140
            +  P+ ELFE L  +GY+ VE    +L  + YD S  C +H GAKGHS++QC  F+ +V
Sbjct: 165 -ITIPLEELFENLLGSGYVSVEYLCPNLKYKEYDGSQTCPFHAGAKGHSLEQCNRFQKRV 224

[Close]

BLAST of Spg024995 vs. NCBI nr
Match: XP_022131653.1 (uncharacterized protein LOC111004780 [Momordica charantia])

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-06
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 154 RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDP 213
           +FGL YKPS+  +I+    E+ KRL+R E+ E  Y   I+P L+ +F  AGIIH E  + 
Sbjct: 617 KFGLRYKPSRGYIIRVRSLEKAKRLSRFENEERDYPRRIVPRLNHSFRSAGIIHQEYDES 676

Query: 214 AVMAII-EQKKEAGPLV 230
           + +A++ E++++ GP V
Sbjct: 677 SAVAVVTEEREQVGPFV 693

HSP 2 Score: 121.3 bits (303), Expect = 1.2e-23
Identity = 89/273 (32.60%), Postives = 138/273 (50.55%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKE 60
           MFI+TL++P+YD+M+GSASTNFSD++  G+ IE+G+K+G+ITD+  SS  ++ + SKKK+
Sbjct: 45  MFISTLQAPYYDRMVGSASTNFSDVIKIGKGIEFGVKNGRITDS--SSETRRMMTSKKKD 104

Query: 61  GE-----------SVVTP-MGE-------LFEILFSNGY-IGVERPQLDLGVRAYDDSLM 120
            E            V +P +G+       L ++L S+   I +  P     ++ YD +  
Sbjct: 105 EEIHELSSTKRVVHVFSPNVGQTNYSPKLLLQLLKSHQVAIVLREPLQPPYLKWYDPNTK 164

Query: 121 CSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQ-------KMVQLPQYGEVDIIEECS 180
           C YH GA GHS + C   + KVQ L+   +L   +           LP Y +   IE+C 
Sbjct: 165 CEYHAGAVGHSTENCFPLKAKVQCLVKGGWLKFKKTGEEPDINQNPLPNYEDDHSIEDCF 224

Query: 181 RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDP 240
            F    K   + ++ A      K L   +    + ++NII         A      S D 
Sbjct: 225 EF----KNEAQKLMDA------KILLIGQMGMQEIKVNIITD-------ASSNKETSNDT 284

Query: 241 AVMAIIEQKKEAGPLVYLCPEDFELNNWTVMEL 247
           +++ I E    + PLVY CP  FELNNW + ++
Sbjct: 285 SIVVISENTIPSHPLVYQCPPKFELNNWKIKKM 298

[Close]

BLAST of Spg024995 vs. NCBI nr
Match: KAA0066013.1 (uncharacterized protein E6C27_scaffold32G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-21
Identity = 95/355 (26.76%), Postives = 148/355 (41.69%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITD-TAGSSTAKKAVPSKKK 60
           +F+NTL++ FYD+M G+ASTNFS+I+  GERIEYGIKHGK+ + T      +K   SKKK
Sbjct: 104 IFMNTLRASFYDRMSGNASTNFSNIIVIGERIEYGIKHGKLAEATTEYGGKEKGTISKKK 163

Query: 61  EGE--------------------------------------------------------- 120
           EGE                                                         
Sbjct: 164 EGEVHAIGFPNSGNYVSTHTFFETPKPVNSNSPQPFVQGQGSKTNSDTWREKPNVNENPL 223

Query: 121 -----------------------SVVTPMGELFEILFSNGYIGVERPQLDL---GVRAYD 180
                                   ++ PM  LFE LF  GY+  E    D+   G+R Y+
Sbjct: 224 PNHENPKVNVVDGLVEKCRNEVHEIMMPMEALFEGLFEAGYVSREYLDPDIRYEGLRPYE 283

Query: 181 DSLMCSYHTGAKGHSIDQCPHFRLKVQEL----LDSHFLTVSQKMVQLPQYGEVDIIEEC 240
            +           +S +     + KV+ +    +     +++Q +  L +    D     
Sbjct: 284 ST----------AYSNEMIKQHKSKVEVMTTRTMGGGGYSLNQNLETLLKTPSND----- 343

Query: 241 SRFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIH----- 256
            RFGLGYK S  D I+ + ++++K L +LE RE    + +IP L+DTF   GI +     
Sbjct: 344 GRFGLGYKSSIYDKIRLYEEKKKKCLVKLEMREFDPSIKLIPELYDTFKIVGISYSSHNS 403

[Close]

BLAST of Spg024995 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 7.8e-29
Identity = 91/245 (37.14%), Postives = 111/245 (45.31%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKK 60
           MFINTLK PFYD+MIGSASTNFSDIMT GERIEYG++H +IT TA     AKKA  SKKK
Sbjct: 298 MFINTLKHPFYDRMIGSASTNFSDIMTIGERIEYGVRHKRITSTADEPLAAKKASHSKKK 357

Query: 61  EGE--------------------------------------------------------- 120
           EGE                                                         
Sbjct: 358 EGELTPVPVDPIQPLYPRWYDANARCDYHAGAIGHSTENCTALKYRVQALLKAGWLNFKK 417

Query: 121 ----------------------------------SVVTPMGELFEILFSNGYIGVERPQL 154
                                              + TP  ELFEIL  +GY+ VE    
Sbjct: 418 ENEPDVSKNPLSNHQNVQINAIECQGIESKSKVADIRTPKEELFEILLGSGYVSVEYLCP 477

[Close]

BLAST of Spg024995 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 91/263 (34.60%), Postives = 114/263 (43.35%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKK 60
           MFINTLK PFYD+M+GSASTNFSDIM  GERIEYG++HG+IT TA     AKK   SKKK
Sbjct: 240 MFINTLKHPFYDRMVGSASTNFSDIMAIGERIEYGVRHGRITSTADEPLAAKKTSHSKKK 299

Query: 61  EGE--------------------------------------------------------- 120
           EGE                                                         
Sbjct: 300 EGELAHVPVDPIQPPYPRWCDANARCDYHTGAIGHSIENCTALKYRVQALIKAGWLNFKK 359

Query: 121 ----------------------------------SVVTPMGELFEILFSNGYIGVERPQL 172
                                              + TPM ELFEIL  +GY+ VE    
Sbjct: 360 ENGPDVSNNPLPNHXNVQINAIECQEIESKSKVADITTPMEELFEILLGSGYVSVEYLCP 419

[Close]

BLAST of Spg024995 vs. ExPASy TrEMBL
Match: A0A6J1BU14 (uncharacterized protein LOC111004780 OS=Momordica charantia OX=3673 GN=LOC111004780 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.8e-26
Identity = 77/197 (39.09%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKK-------- 60
           MFINTLK PFYD+MIGSASTNFS+IMT GE IEYG+KHG+IT T     A K        
Sbjct: 45  MFINTLKHPFYDRMIGSASTNFSNIMTIGETIEYGVKHGQITSTTEELLAAKRQVIPRRK 104

Query: 61  --------------------------------------------------AVPSKKKEGE 120
                                                              + SK K G+
Sbjct: 105 LAPVPVDLIQPPYPRWYDVNARCDYHAGAIGHSTKNCTALKYRVQALIRVGIESKSKVGD 164

Query: 121 SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKV 140
            +  P+ ELFE L  +GY+ VE    +L  + YD S  C +H GAKGHS++QC  F+ +V
Sbjct: 165 -ITIPLEELFENLLGSGYVSVEYLCPNLKYKEYDGSQTCPFHAGAKGHSLEQCNRFQKRV 224

[Close]

BLAST of Spg024995 vs. ExPASy TrEMBL
Match: A0A6J1BU14 (uncharacterized protein LOC111004780 OS=Momordica charantia OX=3673 GN=LOC111004780 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.4e-07
Identity = 31/77 (40.26%), Postives = 50/77 (64.94%), Query Frame = 0


Query: 154 RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDP 213
           +FGL YKPS+  +I+    E+ KRL+R E+ E  Y   I+P L+ +F  AGIIH E  + 
Sbjct: 617 KFGLRYKPSRGYIIRVRSLEKAKRLSRFENEERDYPRRIVPRLNHSFRSAGIIHQEYDES 676

Query: 214 AVMAII-EQKKEAGPLV 230
           + +A++ E++++ GP V
Sbjct: 677 SAVAVVTEEREQVGPFV 693

HSP 2 Score: 121.3 bits (303), Expect = 5.8e-24
Identity = 89/273 (32.60%), Postives = 138/273 (50.55%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKE 60
           MFI+TL++P+YD+M+GSASTNFSD++  G+ IE+G+K+G+ITD+  SS  ++ + SKKK+
Sbjct: 45  MFISTLQAPYYDRMVGSASTNFSDVIKIGKGIEFGVKNGRITDS--SSETRRMMTSKKKD 104

Query: 61  GE-----------SVVTP-MGE-------LFEILFSNGY-IGVERPQLDLGVRAYDDSLM 120
            E            V +P +G+       L ++L S+   I +  P     ++ YD +  
Sbjct: 105 EEIHELSSTKRVVHVFSPNVGQTNYSPKLLLQLLKSHQVAIVLREPLQPPYLKWYDPNTK 164

Query: 121 CSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQ-------KMVQLPQYGEVDIIEECS 180
           C YH GA GHS + C   + KVQ L+   +L   +           LP Y +   IE+C 
Sbjct: 165 CEYHAGAVGHSTENCFPLKAKVQCLVKGGWLKFKKTGEEPDINQNPLPNYEDDHSIEDCF 224

Query: 181 RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDP 240
            F    K   + ++ A      K L   +    + ++NII         A      S D 
Sbjct: 225 EF----KNEAQKLMDA------KILLIGQMGMQEIKVNIITD-------ASSNKETSNDT 284

Query: 241 AVMAIIEQKKEAGPLVYLCPEDFELNNWTVMEL 247
           +++ I E    + PLVY CP  FELNNW + ++
Sbjct: 285 SIVVISENTIPSHPLVYQCPPKFELNNWKIKKM 298

[Close]

BLAST of Spg024995 vs. ExPASy TrEMBL
Match: A0A5D3DUW8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00170 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-20
Identity = 66/183 (36.07%), Postives = 86/183 (46.99%), Query Frame = 0


Query: 1   MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITD-TAGSSTAKKAVPSKKK 60
           MF+NTL++PFY++MIG+ASTN  DI+  GERIEYGIKHG++ + T      KK   SKKK
Sbjct: 128 MFMNTLRAPFYERMIGNASTNVFDIIVIGERIEYGIKHGRLAEATTEYGGIKKGTISKKK 187

Query: 61  EGE-------------------------------------------------SVVTPMGE 120
           E E                                                  +V PM  
Sbjct: 188 EEEVQSLINAGWLSFKKSGEKPNVNENPLPDHENPKVNVVDSLVEKCKNEVHEIVMPMEA 247

Query: 121 LFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHF 134
            FE LF  GY+  E    ++    YD+S  C ++    GH + QC  FR KVQ+L+DS  
Sbjct: 248 FFEGLFEVGYVSHEYLDPNIRYEGYDESRHCRFYQRVAGHVVQQCQKFRSKVQQLMDSKI 307

The following BLAST results are available for this feature:

BLAST of Spg024995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157796.1	1.6e-28	37.14	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022143495.1	3.6e-28	34.60	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]
XP_022131653.1	5.7e-26	39.09	uncharacterized protein LOC111004780 [Momordica charantia]	[more]
XP_022131653.1	1.3e-06	40.26	uncharacterized protein LOC111004780 [Momordica charantia]	[more]
KAA0066013.1	1.1e-21	26.76	uncharacterized protein E6C27_scaffold32G00020 [Cucumis melo var. makuwa]	[more]

BLAST of Spg024995 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ90	7.8e-29	37.14	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1CNY7	1.7e-28	34.60	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]
A0A6J1BU14	2.8e-26	39.09	uncharacterized protein LOC111004780 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A6J1BU14	6.4e-07	40.26	uncharacterized protein LOC111004780 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A5D3DUW8	5.1e-20	36.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg024995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024995.1	Spg024995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process