Spg024824 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024824
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NERD domain-containing protein
Location	scaffold12: 15322920 .. 15328086 (-)
RNA-Seq Expression	Spg024824
Synteny	Spg024824

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGATCATAGCCTTGTCGGAAGATGGAGGGAGACCTTGATCATAGCCTTGCGAGAAAGATGCTTACTTTGGTTGGCCCATTTTGTTGCATTGAAGATGGAGGGAGACCTTGATCATAGCCTCTGGAGTTGTGATTTTGCCCTGTTTGTTTGGAGCCTTTTCTTTGATGTGTTTGGTTTTCAGGTGGTGAGACATAGAGATTACAAGGAGATGATCAAGGAGTTCCTCTTCCATTCGCTTTTTCGCGAGAAAGGGAGGTTTTTGTGGCAAACTGGGGTGTACGCATTATTGTGGATCTATGGGGGGAGAGCAATAGAGTATTTAGGGGTGTGGAGAGAGGCCCTCGTGATGTGTGGTCCCTTACTAGGTTGCATGTTTCTCTTTGGTTGTCGGTGAGGAAGTTATTTTGCAATTATCCATTAGGTTTTATTTTGCTTGATTGAAGTCCCTCCCTTTAGTGAGATTTCCTTTTGTGGGCTTGCTTTTGTTAGTGCCCTTGTATTATATTTTTATTTTTTATTATTGATTTTTTTCCCTTCTTTTTTCTTAAATGAAAGTTAGTTTGTTATTTTAAAAAATGTAATCTTTGAGGTGGTTCATAAGGAATTATTGTCCTCCCTTTTGTATCTTTCATTACTATTGGAAGTTTCTTTCTTATGAATCTTTGAAAGTTTCCAAATAGAAAAAGAAGAATATGAGATATAGAATGGATTTTTATATCATATGTTCAATTTTAAATACAGGTGGCTGAGACACGAAGATGGGCTTCAATTCTTGAATCATACCTTGAGCTGAGAGGAGTTGCTCTTCCGGAAGGATATTTATCGTGGAAAGTTTTGCTTCCCAACCCAAAATTCCGGTATGTAATGGATAATCCCTATTTTTATGCTTCTGATGTCGGACTTGGTTCCTTACTGAAGAAGGTAATTCAATAGTCTTGAGATGTCGCAACACATTGTCTCTGTTGTTAGTCACTCTTTCTATGAGGCATGCAAAAGCATTTGATAGAGCTCAAATTATGTATTTACTGATTTGGCAATGCCAAGGGAGTTTCAAGAGCTCCCCCCCCTCTCTTCAATGCTCAACAAGAGCTACAATTTAGCCAAAATGCAAAAAGATAAACCTCCCTCTCTCCACAATGTCCTTGTAAAAGGCCTACTAACAGACGCACTCAAAACACATAACTACTCGAATCCCATGGACCCCACAAAATCATCACCCACACACTCTCACGATAACAACCTGAAAACCTCACACAATTACATCATTTGGTCCCCCCTTTCTTCCCTTTCTTTCGTGTATACACTTTGGTAATTCGGGGTCTATCAGTTTTTCTTCAAGTTCAAGTGGCGAAATGAACATTTTACTCATTCAAAATTGGGTTTAGAATAGTTTTTTGAAGCTAGATGATATTCCAATTTATTTAAAATTGATAGTTTACGTATGTCACACGGTATCTACATCACCAAGGTTCACAATGTCAATGTCAATGAAAATATTGAGGTCCTAACTTACGGAAATGTCAATGTCAATTGAAATGTTGGTGGACTAGCTACCTTTAAACAAACTTCGAGAACAAAGGTTGAGGATGGAAAACAGGGTGCTGTCAACACCCTCCTCTTCACTATTACCAAAATGTTTATTGGTGGTCTAGCTCAATTTCAAGAAAGATCTTTAGAAATTCTTCTCAATCTCTGTTGCAATACTCTTCAAGATTTCGGTTGATGTAAAGACAAGTTTGTAGGTAATCTCTTTATATGAACTTATTGCAATCCTCCTTATTGGAAGTAGTTCATTTCAGGACTTCCAAAACTCTTGAGTGAGAGAACTAAATTTAGACTTAATGAAGTCTGATCAATTACCTTCGACACCCTAGCCTATGGAGAATTGATACCCCATTTTCAATGGACTCAAATTATGCTATGACACTAAAATCCAAAACAATATTAGATGCAGCCTAAGATCCAGAAGAGAGAACTGGGATCATTCCGTTGCTTTGCTGTTTTGAGGAAAAGTTAGGATTTCCCAGTTTCTAGCTTGATGGAATCAATGTTGTTGAGGCAAGAGGGAGGGGAGATGAGGCTTCAGCACCATAAAGGTATCCATGACGAGGGCCTTTGACTTGGCGCATGCCATGGTGCGCCATTTATTGTCATTTAGTGCCATCACTTGTCAAAAGCAAGGTGATCACCTTTTAGCATGGGCAACAAGAACCCTATTCATATGAGATTGAAATGGAAGAGTCGGAAGAAGACAAATATTAACATGGAGAAGAAGCATAAGAAGAGTCGGAAGGTCAAGAAAAAAAAGAAAAGAAGAAAAGAGACAGAAGAGAGAAGAACAATAAAACGAAGAAGAAAAGTGAATTAACAATACAGAGAAGAAGAATAAGAAGAATCGGAAGATTAAGAAGAAGAGACAGAAGAGAAGAAGAATAAAAGAAGAAAAGTATGACGCACTAAAGAGTGCTTGCATGCAGTATCTCTGGCAAACTCTCTCTCTTCCAATTAATATAAGTCTTGGCAGTATTTTCTGCCAAGTTAACTGATAGCACTATTTAAAGCTTGTTTTGTTTTGTTTTGTTTAATTCCAAGTGGTTGAAGTTAATCTCAACGAATCTTTAGTACTCACTCGATTGCTTGCGCATAACTCTTGGAAGGTTGTTCAAGATACTCTTGAGGTTTACTTTCAATCTAAGGTCATAATTAATCCTTTTATGGCAGACAAGGCTTTGCTAAAAGTAAATGATGAATTTTCTGAGTTTAACTTTGATGGAAAGTGGAGACTAATTGGAGATTTGCATTTCAAGATTGAGAATTGGTCCACAGAGAAGCATTCTGATCCGAAAGTAATAGAAGGTTATGGAGGTTGGATTTCATTGAAAAACTTACCTTTGTCTTATTGGAAGCGTTCTTCTTTTGAAGCTATTGGAGAACACTTTGGGGGGTTTGGTTAGTATTTCTTCCCAAACCCTTTCTTGGATTGCACAGCTGCTAGAATAGAAGTTAAAAAGAATATTGCTGGTTTCATACTTGTAGAAATTGAAGCAACGGATGGGAATATTTAAAATTTCTCTCTTCGATTTAGGGATATTTCTTCCTTAGATTCTCTTATCAGTGGCCGTGGAGTTTTATCAACTTAGGGGCTGTTTGGGGTGTTGAGTTGGTTATAATAGTTAGTGGTTTTATAGTCTGGGGTTATAATAATCTGTGGAGTTAAATAGTCTGTGTTTGGGGTGTAGATTATTTTAGTCTGGGATAAAATAATATGTGTTTGCGGTGCAGATTATTTTAGTATGTGTTAAAATAGTCTGTGTTTGGGGTGCTGATCTGTTTAACATGGGGTTCTGAATCAAAGGTTCAAGCTGATTGTTTTTTTTCTAGCTTTTTTTTATCTTCCTCGTACAACTTTGTACGTCAAATATCATATTTTGCAAATATCAATAAGAAATGTTTGTTCCATCAATCTTAAGAAATTAGCGAAGGGTTTTAAGTAATGTTATTCTTTGATAATTGGGTTTGTTTGGCTGTATGAATGTGCCCAAAATATGATTAGGAATGTTCTTTTTTTTTTTTTTTTTCCTTAAGTTGTTAACCCTGGTTAACCTTCGATGTTGCCAAAAGTAGGGAAGAAATTTGACCTAAAAAAATTGTAAGTGCTTAGTTCAAAAACCAAAATACACTTTTGGTTCCTGAGATTTGGGTTTGGTTTCATTTTGGTCCATGAGTTTTCAAACTCGACAATTTAGCCCTTGAGGTTTGGATTTCGTTTCATTTTGGTTCCTCCATCCAATTTTCTGCTGACTTGACATGCATTTTTTTTATTAAAAAACTATTTTTAAAAATTTTTAAATAAAAAATATTTTATTATTTTATTTTACTTCTTTTTTCTTCTTCTTCATCTTCTTCCTCCATCTTCATCATCTTCATCTTCTTCCTCCATCTTCATCATCTTCATCTTCTTCCTCCATCTTCATCTTCATCTTCATCTTCATCATCTTCTTCCTCCATTTCCATTAAATCTCCATCATCTTCTTCCTCAACCTCAACCTCCATCTTCATCATCTTCTTCATCTTCTTCCTCAACCTCAACCTCCATCTTCATCATTTCCATTAAATCTCCATCAGAAAAAATACCCACTGTGAGAGCAAAAAAGAAATACCCACGCTGGGAGAAAAAACAACCACGTAACTGAGCAAAATACCCACTCTAGGAGAAAAAACAGCCACGTAAGTGAGCAAAAATACCCATGCTGGGAGCAAAAACAGCCCAGCAACAGATGCTCACGAATCAAAAAACGGCCGAAAAAAAGACTCTCAAACGGAGGATGCTCGTGAATCAATAAACATACTCGAGCACGAGCACAAGCAGAAATACCCATGAACGCGATACTACTCGCAAACGGAAAGACACCCACGCACGCCAAAACGCCTAGATGGAGACAAGGTGTCAAATAAGATTCGCAATGCAGGCTATGAAAGAGATGATCGACAATGAAGGCCGGTCGAAGAAGATAATCAGCAATGAAGGCCAATCGAGAGCTTCAAGGCTCTGATACCATATCAATGCAAAAGAGAGAAAAAATATTCTTCCTTGAATGGAAAAGATGAATACAAAGCTAGTCTAAATAGCAAATCACCCTAGAAAATAAAAGGAAAGTAAAAATACCTACAAAGAAAAATACCTAGCTCCATCAATCATTTACCAATTAGGAGCTAATTACAAAAAAGGAAATAAATAACAAATAGCTGTACAATATAATTTGAAAAAAATAAACTATTAATGATTACAACTACTAATTTAAATATTATTCATTTTCTCTCTTTATTGAACTTCATATCATATTGAGTTCTCACTATCATGGAACACAGAAAAGCAACATTTGATTTTTGTTTCATGGCATCCATGTCACCACTCAACGATTTCCTAAAAGTTGTTTGTTATTAACTGCAGAACGGTCCATTCAAACTATTTTCCTTCTGAAGTCATCACATATGATCAGTGGATACAGTTGAAACCAGAACCAAAAAGCATATTCTCTGGTTGGATAAAGAGTGCTTTGCGTGGAGGGAAAAAAGAGATGCAGGAATCGATGGATCAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGTTTGTACGTGTTGAGATTTGA

mRNA sequence

ATGCTTGATCATAGCCTTGTCGGAAGATGGAGGGAGACCTTGATCATAGCCTTGCGAGAAAGATGCTTACTTTGGTTGGCCCATTTTGTTGCATTGAAGATGGAGGGAGACCTTGATCATAGCCTCTGGAGTTGTGATTTTGCCCTGTTTGTTTGGAGCCTTTTCTTTGATGTGTTTGGTTTTCAGGTGGTGAGACATAGAGATTACAAGGAGATGATCAAGGAGTTCCTCTTCCATTCGCTTTTTCGCGAGAAAGGGAGGTTTTTGTGGCAAACTGGGGTGTACGCATTATTGTGGATCTATGGGGGGAGAGCAATAGAGTATTTAGGGGTGGCTGAGACACGAAGATGGGCTTCAATTCTTGAATCATACCTTGAGCTGAGAGGAGTTGCTCTTCCGGAAGGATATTTATCGTGGAAAGTTTTGCTTCCCAACCCAAAATTCCGGTATGTAATGGATAATCCCTATTTTTATGCTTCTGATGTCGGACTTGGTTCCTTACTGAAGAAGGATTTCCCAGTTTCTAGCTTGATGGAATCAATGTTGTTGAGGCAAGAGGGAGGGGAGATGAGGCTTCAGCACCATAAAGTGGTTGAAGTTAATCTCAACGAATCTTTAGTACTCACTCGATTGCTTGCGCATAACTCTTGGAAGGTTGTTCAAGATACTCTTGAGGTTTACTTTCAATCTAAGGTCATAATTAATCCTTTTATGGCAGACAAGGCTTTGCTAAAAGTAAATGATGAATTTTCTGAGTTTAACTTTGATGGAAAGTGGAGACTAATTGGAGATTTGCATTTCAAGATTGAGAATTGGTCCACAGAGAAGCATTCTGATCCGAAAGTAATAGAAGGTTATGGAGGTTGGATTTCATTGAAAAACTTACCTTTGTCTTATTGGAAGCGTTCTTCTTTTGAAGCTATTGGAGAACACTTTGGGGGAACGGTCCATTCAAACTATTTTCCTTCTGAAGTCATCACATATGATCAGTGGATACAGTTGAAACCAGAACCAAAAAGCATATTCTCTGGTTGGATAAAGAGTGCTTTGCGTGGAGGGAAAAAAGAGATGCAGGAATCGATGGATCAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGTTTGTACGTGTTGAGATTTGA

Coding sequence (CDS)

ATGCTTGATCATAGCCTTGTCGGAAGATGGAGGGAGACCTTGATCATAGCCTTGCGAGAAAGATGCTTACTTTGGTTGGCCCATTTTGTTGCATTGAAGATGGAGGGAGACCTTGATCATAGCCTCTGGAGTTGTGATTTTGCCCTGTTTGTTTGGAGCCTTTTCTTTGATGTGTTTGGTTTTCAGGTGGTGAGACATAGAGATTACAAGGAGATGATCAAGGAGTTCCTCTTCCATTCGCTTTTTCGCGAGAAAGGGAGGTTTTTGTGGCAAACTGGGGTGTACGCATTATTGTGGATCTATGGGGGGAGAGCAATAGAGTATTTAGGGGTGGCTGAGACACGAAGATGGGCTTCAATTCTTGAATCATACCTTGAGCTGAGAGGAGTTGCTCTTCCGGAAGGATATTTATCGTGGAAAGTTTTGCTTCCCAACCCAAAATTCCGGTATGTAATGGATAATCCCTATTTTTATGCTTCTGATGTCGGACTTGGTTCCTTACTGAAGAAGGATTTCCCAGTTTCTAGCTTGATGGAATCAATGTTGTTGAGGCAAGAGGGAGGGGAGATGAGGCTTCAGCACCATAAAGTGGTTGAAGTTAATCTCAACGAATCTTTAGTACTCACTCGATTGCTTGCGCATAACTCTTGGAAGGTTGTTCAAGATACTCTTGAGGTTTACTTTCAATCTAAGGTCATAATTAATCCTTTTATGGCAGACAAGGCTTTGCTAAAAGTAAATGATGAATTTTCTGAGTTTAACTTTGATGGAAAGTGGAGACTAATTGGAGATTTGCATTTCAAGATTGAGAATTGGTCCACAGAGAAGCATTCTGATCCGAAAGTAATAGAAGGTTATGGAGGTTGGATTTCATTGAAAAACTTACCTTTGTCTTATTGGAAGCGTTCTTCTTTTGAAGCTATTGGAGAACACTTTGGGGGAACGGTCCATTCAAACTATTTTCCTTCTGAAGTCATCACATATGATCAGTGGATACAGTTGAAACCAGAACCAAAAAGCATATTCTCTGGTTGGATAAAGAGTGCTTTGCGTGGAGGGAAAAAAGAGATGCAGGAATCGATGGATCAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGTTTGTACGTGTTGAGATTTGA

Protein sequence

MLDHSLVGRWRETLIIALRERCLLWLAHFVALKMEGDLDHSLWSCDFALFVWSLFFDVFGFQVVRHRDYKEMIKEFLFHSLFREKGRFLWQTGVYALLWIYGGRAIEYLGVAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKKDFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQSKVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWISLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSALRGGKKEMQESMDQKLNFVLNTAPMWDRFVRVEI

Homology

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BLAST of Spg024824 vs. NCBI nr
Match: XP_022995191.1 (uncharacterized protein LOC111490811 [Cucurbita maxima])

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-29
Identity = 97/267 (36.33%), Postives = 99/267 (37.08%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGVALPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQWIQLKPE KS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKEMQES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEMQESKDEKLNFVLNTAPMWDR 215

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BLAST of Spg024824 vs. NCBI nr
Match: XP_023534697.1 (uncharacterized protein LOC111796185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.0 bits (354), Expect = 2.2e-29
Identity = 96/267 (35.96%), Postives = 100/267 (37.45%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGVALPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWMQLKPEPKSMFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKE+QES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEIQESKDEKLNFVLNTAPMWDR 215

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BLAST of Spg024824 vs. NCBI nr
Match: XP_022957721.1 (uncharacterized protein LOC111459180 [Cucurbita moschata])

HSP 1 Score: 141.0 bits (354), Expect = 2.2e-29
Identity = 96/267 (35.96%), Postives = 100/267 (37.45%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGVALPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWMQLKPEPKSMFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKE+QES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEIQESKDEKLNFVLNTAPMWDR 215

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BLAST of Spg024824 vs. NCBI nr
Match: KAG6605718.1 (hypothetical protein SDJN03_03035, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-29
Identity = 95/267 (35.58%), Postives = 99/267 (37.08%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGV LPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVELPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWMQLKPEPKSMFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKE+QES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEIQESKDEKLNFVLNTAPMWDR 215

[Close]

BLAST of Spg024824 vs. NCBI nr
Match: KAG7035626.1 (hypothetical protein SDJN02_02424 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.0 bits (349), Expect = 8.3e-29
Identity = 95/267 (35.58%), Postives = 99/267 (37.08%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGV LPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVELPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWMQLKPEPKSMFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKE+QES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEIQESKDEKLNFVLNTAPMWDR 215

[Close]

BLAST of Spg024824 vs. ExPASy TrEMBL
Match: A0A6J1K1B0 (uncharacterized protein LOC111490811 OS=Cucurbita maxima OX=3661 GN=LOC111490811 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.1e-30
Identity = 97/267 (36.33%), Postives = 99/267 (37.08%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGVALPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQWIQLKPE KS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKEMQES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEMQESKDEKLNFVLNTAPMWDR 215

[Close]

BLAST of Spg024824 vs. ExPASy TrEMBL
Match: A0A6J1H014 (uncharacterized protein LOC111459180 OS=Cucurbita moschata OX=3662 GN=LOC111459180 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-29
Identity = 96/267 (35.96%), Postives = 100/267 (37.45%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRWASILESYLE RGVALPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVHSNYFPSEVITYDQW+QLKPEPKS+FSGWIKSAL
Sbjct: 294 ------------------------TVHSNYFPSEVITYDQWMQLKPEPKSMFSGWIKSAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKE+QES D+KLNFVLNTAPMWDR
Sbjct: 354 RGGKKEIQESKDEKLNFVLNTAPMWDR 215

[Close]

BLAST of Spg024824 vs. ExPASy TrEMBL
Match: A0A0A0LKG9 (NERD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G915150 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-27
Identity = 92/267 (34.46%), Postives = 95/267 (35.58%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           VAETRRW SILESY E RGVALPEGYLSWKVLLPNPKFR                     
Sbjct: 114 VAETRRWVSILESYFEQRGVALPEGYLSWKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   T+HSNYFPSEVI YDQWI LKPEPKS+FSGWIKSA 
Sbjct: 294 ------------------------TIHSNYFPSEVIMYDQWIHLKPEPKSMFSGWIKSAW 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
            GGKKEMQ+SMDQKLNFVLNTAPMWDR
Sbjct: 354 LGGKKEMQDSMDQKLNFVLNTAPMWDR 215

[Close]

BLAST of Spg024824 vs. ExPASy TrEMBL
Match: A0A6J1DTU9 (uncharacterized protein LOC111023945 OS=Momordica charantia OX=3673 GN=LOC111023945 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.9e-27
Identity = 94/267 (35.21%), Postives = 96/267 (35.96%), Query Frame = 0


Query: 111 VAETRRWASILESYLELRGVALPEGYLSWKVLLPNPKFRYVMDNPYFYASDVGLGSLLKK 170
           V ETRRWASILESYLE RGVALPEGYLS KVLLPNPKFR                     
Sbjct: 114 VVETRRWASILESYLEQRGVALPEGYLSCKVLLPNPKFR--------------------- 173

Query: 171 DFPVSSLMESMLLRQEGGEMRLQHHKVVEVNLNESLVLTRLLAHNSWKVVQDTLEVYFQS 230
                                                                       
Sbjct: 174 ------------------------------------------------------------ 215

Query: 231 KVIINPFMADKALLKVNDEFSEFNFDGKWRLIGDLHFKIENWSTEKHSDPKVIEGYGGWI 290
                                                                       
Sbjct: 234 ------------------------------------------------------------ 215

Query: 291 SLKNLPLSYWKRSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSAL 350
                                   TVH NYFPSEV+TYDQ+IQLKPEPKS FSGWIK AL
Sbjct: 294 ------------------------TVHLNYFPSEVVTYDQYIQLKPEPKSTFSGWIKGAL 215

Query: 351 RGGKKEMQESMDQKLNFVLNTAPMWDR 378
           RGGKKEMQESMDQKLNFVLNTAPMWDR
Sbjct: 354 RGGKKEMQESMDQKLNFVLNTAPMWDR 215

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BLAST of Spg024824 vs. ExPASy TrEMBL
Match: A0A5J5AUD1 (NERD domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_031110 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-25
Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 0


Query: 250 FSEFNFDGKWRLIGDLHFKIENWSTEKHSDP--------KVIEGYGGWISLKNLPLSYWK 309
           F   + DG W   G+   K     T++H DP         ++E Y   +  +        
Sbjct: 88  FVSIDTDGSWVCTGESRHK-----TKRHPDPVAETKRQAAILESY---LEQRGAAFPEGY 147

Query: 310 RSSFEAIGEHFGGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSALRGGKKEMQESM 369
            S           T+HSNYFPSEVITYDQW+QLKPEPKS+FSGWIK A RGGKKEMQES+
Sbjct: 148 FSCKVVCPNPNFRTIHSNYFPSEVITYDQWVQLKPEPKSMFSGWIKGAFRGGKKEMQESI 207

Query: 370 DQKLNFVLNTAPMWDR 378
            Q LNF+L+TAPMWDR
Sbjct: 208 HQNLNFILSTAPMWDR 215

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BLAST of Spg024824 vs. TAIR 10
Match: AT1G65020.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-18
Identity = 54/125 (43.20%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 256 DGKWRLIGDLHFKIENWS---TEKHSDPKVIEGYGGWISLKNLPLSYWKRSSFEAIGEHF 315
           DG W   G  H   E +     E      V+E Y   +  + + L     S    I    
Sbjct: 94  DGSWVCEGGKHHTTETFPDPLAEVKKQASVLESY---LEQRGVTLLEGNVSCKVVIPNPS 153

Query: 316 GGTVHSNYFPSEVITYDQWIQLKPEPKSIFSGWIKSALRGGKKEMQESMDQKLNFVLNTA 375
             T+H+  FPSEVITY+ W QLKP  KS  SGW+K A   G KEMQES  QKLNF+L TA
Sbjct: 154 FRTIHA--FPSEVITYEDWQQLKPVSKSKISGWVKGAFSTG-KEMQESSHQKLNFILGTA 212

Query: 376 PMWDR 378
           P WDR
Sbjct: 214 PTWDR 212

The following BLAST results are available for this feature:

BLAST of Spg024824 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995191.1	1.7e-29	36.33	uncharacterized protein LOC111490811 [Cucurbita maxima]	[more]
XP_023534697.1	2.2e-29	35.96	uncharacterized protein LOC111796185 [Cucurbita pepo subsp. pepo]	[more]
XP_022957721.1	2.2e-29	35.96	uncharacterized protein LOC111459180 [Cucurbita moschata]	[more]
KAG6605718.1	8.3e-29	35.58	hypothetical protein SDJN03_03035, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7035626.1	8.3e-29	35.58	hypothetical protein SDJN02_02424 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Spg024824 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024824 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1B0	8.1e-30	36.33	uncharacterized protein LOC111490811 OS=Cucurbita maxima OX=3661 GN=LOC111490811...	[more]
A0A6J1H014	1.1e-29	35.96	uncharacterized protein LOC111459180 OS=Cucurbita moschata OX=3662 GN=LOC1114591...	[more]
A0A0A0LKG9	2.2e-27	34.46	NERD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G915150 PE=4 S...	[more]
A0A6J1DTU9	4.9e-27	35.21	uncharacterized protein LOC111023945 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5J5AUD1	1.2e-25	48.53	NERD domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_031110 PE=4 ...	[more]

BLAST of Spg024824 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65020.1	3.2e-18	43.20	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35287	SI:ZFOS-911D5.4	coord: 315..377 coord: 111..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024824.1	Spg024824.1	mRNA