
Spg024794 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCCACTCGAGAGTGGACGAACAAAATCACAAGGAGGAGCAAAGCAATGGTGTCGTTGAAGCTCCAGAAGCGCCTCGCCTCGAGCGTCCTCAAATGTGGAAGAGGCAAGGTCTGGCTTGATCCCAACGAAGTCAATGAGATCTCAATGGCCAATTCCAGTACGTTCCTCCATATCTTTTCTCCCATACGAACTCTTGCTCTGCAATTAGGGCACAATTGAATCCATATACATTTTCGCTGCAATACGCTAACTTATCTGAAGTTCTAGTTCTGTAGTTTTGAGTTTTCTAGTTTGATTTTTTGGAATTTTGAAGCATCATCGATAGCTTTATGGTTTGATTATTTCTGATCGTCAGAGATCGTAAATTTTCAATACGCTCATGCTGTATTGAAATTTCGTACGTTTATCTTCTCTTAAAACAGAAAAACAGGCAAGTTTTGTTCTTAGCACTATCTTCAATTCAACCTAGAAACGAGATTGAATTGCAAGCTAATATAGTTATTTACACGACCAATGAATATTGTTGGCTTTCAAATCGACAGTAGCATTTGGATGCAATTGATGATCAAGATTACTATACGCCATTCGACCTAATACGTCTCCGTTCATACGTTTTTGTCTACCAAGTTTGGATTCTAGTTCATTATACATTCTGAAAATTCTGCATTCCTTGATTTTCTATTTCTCTTGGTTTTAACCATGTATCCCTTTTATTATTTTCTAGGATATCATTCTACCGAAGATTTATTGGTCTGTATATTTGGAGTTTACTCCATTTGTTTGATGCTTCTCTCATTTTGTAATATGTAAATCGTAATGGTTGCAGGGCAGAATATCAGGAAGCTAGTAAAAGATGGGTTCATTATAAGAAAACCAACCAAGATTCATTCTCGGTCCCGTGCACGCAGAATGAAGGAAGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTATGATTTGCTTATTTTGTGTGAGTTTCTTATTTCATTGGTTTGCTGGGCATGCCTTGAGGAGTGTATGTGTATCTGATTGAAAATTATGGGGGAAAGATAATCAAATTTTACCCCTGAACTTGGCAAGGGGTATTGATTTTTACCCTTTAACTTTCAATTTCATCAAATTAATTCACCATGGTAAAAAACTCCAAACATTCATTAACTTCAATGAAATCGTGTTTTGCACAAAATCACTTTGAAGTTGAATATCTCTCCCAAAACTTAATATATTTCAAATAAGAAAAGAGCTATAATTTCATTTTCTCGAAAGTCTTATCAATTTCTCATTGGACATATGTTTTAGTGTTCATTAAACAATAGCTTGTTATAAGGTAAAAAGTGCAACACCTAAATTGCAATACTTGTTTAAACATTAAAGTGCAATTCGATGAAATTGGAAATTTAGGATAAAAGTTGATACACCTTGCCAAATTTAGGGGTAAAAGTTTATATTGTCCCAAAATTATATTGCTTGAAAATGTTTTTAGTTCATGTGAGGAGGTGAAGATTACTTCTTTAATGTTATTGCAAACATTTAAGATATTTATCGTTTTTTTCCCTCTCTCTAGGTAAGCGCAGGGGAACTAGGGAGGCAAGGCTACCGACCAAGGTTCTTTGGATGAGAAGAATGCGCGTATTGAGGCGCCTTCTTCGTAAGTACCGAGAGTCCAAAAAAATTGATAAGCACATGTATCATGACATGTATATGAAGGTCAAGGGTAATGTCTTCAAGAACAAGAGAGTACTAATGGAGAGTATTCACAAATCAAAAGCCGAAAAAGCCAGAGAGAAGACACTTTCTGATCAATTCGAGGCCAAACGAGCTAAGAACAAGGCAAGCAGAGAACGTAAGATTGCTCGCAGGGAGGAACGCTTAGCACAGGTAAGAACTAGATCTTAAAGTTATCTTGTATTCAAAATCATTATTTTTGAAATTGCTGGGAATTACCAATCATGGTGTATAACTTATATCTTTAATTGACTTTTAGTTTTTAGCCATAAAGATATACGTTATAGTTAAAAGTTTTGGACCAACATGAGCCTAGCTCAATTGACATAAAACTTGTACTAATGATCAAGAGGCATGTGGTTTGAATCCCCCAACCTACATGTCAAAAAAAAAAAAAAAAAAAGTTAAAAGCTTTGGAATTATTGGGTGCACACTGCGGATCTGTTTACTCTCCTATTTTAATGGCTATAAGAGTTTCTGTATCCACATGTCCATCTTCTTTTCCATCTATTTAATGCAATGAGTTTCTTAGACCTTTGGCTTATTATGTTATGTGCTAATGCATTCACAGGGTCCTGGAGAAAGAGGAATTCAACCAGCAGAGTAAGAACTTTGTGTTATACTTATTGTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTATTATTATTATTATTATTATTGAAATAATTGTTGGGTCGGTATCGAACCATCAACTTTTGAAAGAGTTATAACTTATAAGTGTCTTATCTATTTAGCTAGGTTGGAACTAGGTTGGAACTGATATATATGATCATCTATTTGAAATAGAGATTAATTGCTAATAATCTCCATTCATTCTTGCAGGGGAGGTAAGAAGCTCAAGAAATGAGAGTTTCTCTATCCAAACCCATTTTTGTCAGGTTTCATTAGTATAATTTAACCATTTGAAAAAAAATAATTTAAGGCCTATGCCTCGTAAGCTTATTATATCTTTTTGATGACTTCAAACTCAGAGGATTATGCCAGACGTTTATTTGGCATAATTTTTTGAGTTTCTTTTTGTTATCTTTTGGATTTTTGAGGAAAATTTCCCCCAATATCGTGTACTGTTCCTGCTGCGTTATACGTGTTGGAGTTTTATAGGGTCCGTTTGGTGATGTTCTCGTTTCTTGTTTCCGTTTCTTCATTGAAAAATATAATTTCAT ATGGTGTCGTTGAAGCTCCAGAAGCGCCTCGCCTCGAGCGTCCTCAAATGTGGAAGAGGCAAGGTCTGGCTTGATCCCAACGAAGTCAATGAGATCTCAATGGCCAATTCCAGGCAGAATATCAGGAAGCTAGTAAAAGATGGGTTCATTATAAGAAAACCAACCAAGATTCATTCTCGGTCCCGTGCACGCAGAATGAAGGAAGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTAAGCGCAGGGGAACTAGGGAGGCAAGGCTACCGACCAAGGTTCTTTGGATGAGAAGAATGCGCGTATTGAGGCGCCTTCTTCGTAAGTACCGAGAGTCCAAAAAAATTGATAAGCACATGTATCATGACATGTATATGAAGGTCAAGGGTAATGTCTTCAAGAACAAGAGAGTACTAATGGAGAGTATTCACAAATCAAAAGCCGAAAAAGCCAGAGAGAAGACACTTTCTGATCAATTCGAGGCCAAACGAGCTAAGAACAAGGCAAGCAGAGAACGTAAGATTGCTCGCAGGGAGGAACGCTTAGCACAGGGTCCTGGAGAAAGAGGAATTCAACCAGCAGAGGGAGGTAAGAAGCTCAAGAAATGA ATGGTGTCGTTGAAGCTCCAGAAGCGCCTCGCCTCGAGCGTCCTCAAATGTGGAAGAGGCAAGGTCTGGCTTGATCCCAACGAAGTCAATGAGATCTCAATGGCCAATTCCAGGCAGAATATCAGGAAGCTAGTAAAAGATGGGTTCATTATAAGAAAACCAACCAAGATTCATTCTCGGTCCCGTGCACGCAGAATGAAGGAAGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTAAGCGCAGGGGAACTAGGGAGGCAAGGCTACCGACCAAGGTTCTTTGGATGAGAAGAATGCGCGTATTGAGGCGCCTTCTTCGTAAGTACCGAGAGTCCAAAAAAATTGATAAGCACATGTATCATGACATGTATATGAAGGTCAAGGGTAATGTCTTCAAGAACAAGAGAGTACTAATGGAGAGTATTCACAAATCAAAAGCCGAAAAAGCCAGAGAGAAGACACTTTCTGATCAATTCGAGGCCAAACGAGCTAAGAACAAGGCAAGCAGAGAACGTAAGATTGCTCGCAGGGAGGAACGCTTAGCACAGGGTCCTGGAGAAAGAGGAATTCAACCAGCAGAGGGAGGTAAGAAGCTCAAGAAATGA MVSLKLQKRLASSVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGERGIQPAEGGKKLKK Homology
BLAST of Spg024794 vs. NCBI nr
Match: XP_031277145.1 (60S ribosomal protein L19-1 [Pistacia vera]) HSP 1 Score: 354.8 bits (909), Expect = 5.0e-94 Identity = 193/204 (94.61%), Postives = 197/204 (96.57%), Query Frame = 0
BLAST of Spg024794 vs. NCBI nr
Match: KDO71764.1 (hypothetical protein CISIN_1g028783mg [Citrus sinensis]) HSP 1 Score: 354.4 bits (908), Expect = 6.6e-94 Identity = 191/204 (93.63%), Postives = 198/204 (97.06%), Query Frame = 0
BLAST of Spg024794 vs. NCBI nr
Match: XP_006419496.1 (60S ribosomal protein L19-1 [Citrus clementina] >XP_006489028.1 60S ribosomal protein L19-1 [Citrus sinensis] >ESR32736.1 hypothetical protein CICLE_v10005909mg [Citrus clementina] >GAY35819.1 hypothetical protein CUMW_018720 [Citrus unshiu]) HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93 Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0
BLAST of Spg024794 vs. NCBI nr
Match: XP_015899890.1 (60S ribosomal protein L19-3 [Ziziphus jujuba] >XP_015900046.1 60S ribosomal protein L19-3 [Ziziphus jujuba]) HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93 Identity = 194/206 (94.17%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of Spg024794 vs. NCBI nr
Match: XP_027099038.1 (60S ribosomal protein L19-1-like [Coffea arabica] >XP_027149386.1 60S ribosomal protein L19-1 [Coffea eugenioides]) HSP 1 Score: 352.4 bits (903), Expect = 2.5e-93 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 8.1e-87 Identity = 171/186 (91.94%), Postives = 182/186 (97.85%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3) HSP 1 Score: 318.5 bits (815), Expect = 5.3e-86 Identity = 171/186 (91.94%), Postives = 181/186 (97.31%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 1.5e-85 Identity = 167/186 (89.78%), Postives = 177/186 (95.16%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy Swiss-Prot
Match: P36241 (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2) HSP 1 Score: 240.4 bits (612), Expect = 1.8e-62 Identity = 127/182 (69.78%), Postives = 153/182 (84.07%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy Swiss-Prot
Match: Q7ZYS1 (60S ribosomal protein L19 OS=Xenopus laevis OX=8355 GN=rpl19 PE=2 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.0e-61 Identity = 127/181 (70.17%), Postives = 151/181 (83.43%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy TrEMBL
Match: A0A067FWK2 (Ribosomal protein L19 OS=Citrus sinensis OX=2711 GN=CISIN_1g028783mg PE=3 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.2e-94 Identity = 191/204 (93.63%), Postives = 198/204 (97.06%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy TrEMBL
Match: V4S773 (Ribosomal protein L19 OS=Citrus clementina OX=85681 GN=CICLE_v10005909mg PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 7.1e-94 Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy TrEMBL
Match: A0A2H5N6H4 (Ribosomal protein L19 OS=Citrus unshiu OX=55188 GN=CUMW_018720 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 7.1e-94 Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy TrEMBL
Match: A0A6P4ASQ2 (Ribosomal protein L19 OS=Ziziphus jujuba OX=326968 GN=LOC107433150 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 9.3e-94 Identity = 194/206 (94.17%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of Spg024794 vs. ExPASy TrEMBL
Match: A0A068VBP6 (Ribosomal protein L19 OS=Coffea canephora OX=49390 GN=GSCOC_T00005022001 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93 Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Spg024794 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein ) HSP 1 Score: 321.2 bits (822), Expect = 5.8e-88 Identity = 171/186 (91.94%), Postives = 182/186 (97.85%), Query Frame = 0
BLAST of Spg024794 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein ) HSP 1 Score: 318.5 bits (815), Expect = 3.7e-87 Identity = 171/186 (91.94%), Postives = 181/186 (97.31%), Query Frame = 0
BLAST of Spg024794 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein ) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-86 Identity = 167/186 (89.78%), Postives = 177/186 (95.16%), Query Frame = 0
BLAST of Spg024794 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein ) HSP 1 Score: 72.8 bits (177), Expect = 3.6e-13 Identity = 63/133 (47.37%), Postives = 77/133 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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