Spg024704 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024704
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L29
Location	scaffold12: 10308497 .. 10310312 (+)
RNA-Seq Expression	Spg024704
Synteny	Spg024704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGATTAACTGAGCTGAGGCAAGGGAAACCCTAGCATTTGCAGGCAGCCACCGCAGAGTCTAAGGTTTGTTCAATTTAAATCCTCTCTTTCTATTGATTGCTTTTATAACAAGGATCGGCATCATCAGTTTCCTGATCTCACTATCTCTTCTCTGATTTTTTGGTTTAGAGATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGGTAAGGGAGTCATCGATAGAATCGCTTCTGTTTGTTCATTTGTTTTTTAATAGAATGCTTCAGCAGAATAGTCTTAATTCTTGTCTCGTCGATCTGTGTATAGATGGACCCGAAGTTCCTTAGGAATCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACGGCTTCTGAGGAAGAGTAAAGTAGAACGCCATGAAGCGGCAAGTTTAGGGTTTTTATGATATAAGTTTGCTATCTATTGAACCTTTTGTTTTCTCTGTTCTTTTTGCTCAGTAGTCTTGTAATTTTGACTTTGTAGCGATTTCTATTTCAATGTGGAAACCGTTGCTTCTGAGGCCTGGTTATTATACATTATCTGTTTTTCATTTTTAAGGTTTTAACTATTGGTTACATCTTTATACATAACCACTTGTGCCACTGATATTCTCTTCACTCTTATTGATTAGCCAAGGCATTATCTTCTCGATTGTTTTATCTTGTGTTGTTAGTCTTGCTGAAAAGCGTAGTTATAGGTATAGATTAGATTTGTATGGTAGGACGTGGGTTTGATGTACTGGGTCTTAATTTTTTTAGCTCATTCTTCCGCACGTCAAAAACAATGTTCCCAAATTTAGACTTGAAGAAGAGTATTATGATTCAATGCTCTATTAGAGCTGTTTCTTGAGATGTTTTCCTAGAGATATTTGAATTTAACTTTTTTTTTTTTTAGTTTCTCCCTTCTTTTTTTATATGCTTCATTACTTCATAGGAATGTTCATGGCATCTTGATTTGGAACGAAAAGTGAGGTCATAGTTATAAGAATGTCAGGCTACAAATTTAAGATTTCTATGCCTTCGAGAAAATGTGCTCAACCCATGAGTGTGGAATTTAAAATTTTCTGACTTTTCATCCTATTAAAGAAAATCTGTGTCAAAGGATCAATTAGTTGTAGAGTTTTCTGCTTTAGCGATCAATGTATTACAAGCTGGGCAAATTTTTTTTGTTGCTTTTAAGATTTTTGTGACAATACATTTATGGGATGGTTAAATCTATATGTTGGTGCGATTTATACGCTAGCAATTGTTGTGACGATTTCCAGGAGCAAACCCTTCTTTGATTCATATGGTTTGTACTTGCTAGTACACGTCTGCTATTCCCATTTTTTTTTTCACAAAAAAGCATTATGTAATTTGAAAGTAGCATGTTCAGGGATGGATGTTAGGATAAAAGGTGATTCCCTTTGATCAGTCCAAGTATCTCTCGATTGTGGGGTCTATATATCAACTGGTTGAGGCTCAACTAATGGAATTCTCACCAGCTGAAAACCATCATCAATATATTGTTGAAGTCTGAAGAAAGTGCTTGGTTTTCTGCAAGGGCCTTTGTGTTTGACCTGAAACTTGTCTTTATCCAAGACCGTTGGTGAATGAGGCTCTTCCAGTTGCAATCGCAAAGGCTCAATATTTGAAGATAGTATCAACAATGCAGCCAATCGCTTTACGAGAGACAACAGCATTTATTCTTGCAATGCAGATGGAGTTGAAGAATCGACTATGA

mRNA sequence

ATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCCGAAGTTCCTTAGGAATCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACGGCTTCTGAGGAAGACGATTTCTATTTCAATGTGGAAACCGTTGCTTCTGAGGCCTGCCAAGGCATTATCTTCTCGATTGTTTTATCTTGTGTTGTTAGTCTTGCTGAAAAGCGTAGTTATAGACCGTTGGTGAATGAGGCTCTTCCAGTTGCAATCGCAAAGGCTCAATATTTGAAGATAGTATCAACAATGCAGCCAATCGCTTTACGAGAGACAACAGCATTTATTCTTGCAATGCAGATGGAGTTGAAGAATCGACTATGA

Coding sequence (CDS)

ATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCCGAAGTTCCTTAGGAATCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACGGCTTCTGAGGAAGACGATTTCTATTTCAATGTGGAAACCGTTGCTTCTGAGGCCTGCCAAGGCATTATCTTCTCGATTGTTTTATCTTGTGTTGTTAGTCTTGCTGAAAAGCGTAGTTATAGACCGTTGGTGAATGAGGCTCTTCCAGTTGCAATCGCAAAGGCTCAATATTTGAAGATAGTATCAACAATGCAGCCAATCGCTTTACGAGAGACAACAGCATTTATTCTTGCAATGCAGATGGAGTTGAAGAATCGACTATGA

Protein sequence

MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEDDFYFNVETVASEACQGIIFSIVLSCVVSLAEKRSYRPLVNEALPVAIAKAQYLKIVSTMQPIALRETTAFILAMQMELKNRL

Homology

[Close]

BLAST of Spg024704 vs. NCBI nr
Match: XP_038875325.1 (60S ribosomal protein L29-1-like [Benincasa hispida])

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-23
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. NCBI nr
Match: XP_023000055.1 (60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal protein L29-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. NCBI nr
Match: XP_022930218.1 (60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

[Close]

BLAST of Spg024704 vs. NCBI nr
Match: XP_038875270.1 (60S ribosomal protein L29-1 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. NCBI nr
Match: KAG7013674.1 (60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-22
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1   MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
           MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Sbjct: 58  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 117

Query: 61  D 62
           +
Sbjct: 118 E 118

[Close]

BLAST of Spg024704 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-21
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 7.2e-21
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Spg024704 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Spg024704 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Spg024704 vs. ExPASy TrEMBL
Match: A0A6J1KHA4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. ExPASy TrEMBL
Match: A0A6J1EUF7 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.1e-23
Identity = 59/60 (98.33%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

[Close]

BLAST of Spg024704 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. ExPASy TrEMBL
Match: A0A6J1CB13 (60S ribosomal protein L29 OS=Momordica charantia OX=3673 GN=LOC111009591 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.0e-22
Identity = 58/60 (96.67%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETASEE
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSAETASEE 60

[Close]

BLAST of Spg024704 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family )

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family )

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family )

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

[Close]

BLAST of Spg024704 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family )

HSP 1 Score: 101.7 bits (252), Expect = 5.1e-22
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Sbjct: 23 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 82

Query: 61 D 62
          +
Sbjct: 83 E 83

[Close]

BLAST of Spg024704 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family )

HSP 1 Score: 101.7 bits (252), Expect = 5.1e-22
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 D 62
          +
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Spg024704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875325.1	3.3e-23	98.36	60S ribosomal protein L29-1-like [Benincasa hispida]	[more]
XP_023000055.1	7.4e-23	96.72	60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal pro...	[more]
XP_022930218.1	1.3e-22	98.33	60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal pro...	[more]
XP_038875270.1	1.3e-22	96.72	60S ribosomal protein L29-1 [Benincasa hispida]	[more]
KAG7013674.1	2.1e-22	95.08	60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Spg024704 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7X7	4.2e-21	83.61	60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1	[more]
Q84WM0	7.2e-21	83.61	60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2	[more]
Q58DW3	2.9e-14	76.92	60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3	[more]
P47914	2.9e-14	76.92	60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2	[more]
Q8HXB8	2.9e-14	76.92	60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3	[more]

BLAST of Spg024704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHA4	3.6e-23	96.72	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1	[more]
A0A6J1EUF7	6.1e-23	98.33	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=...	[more]
A0A6J1L4P4	1.0e-22	95.08	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1	[more]
A0A6J1H4N3	1.0e-22	95.08	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=...	[more]
A0A6J1CB13	3.0e-22	96.67	60S ribosomal protein L29 OS=Momordica charantia OX=3673 GN=LOC111009591 PE=3 SV...	[more]

BLAST of Spg024704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06700.1	3.0e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06700.2	3.0e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06700.3	3.0e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06680.1	5.1e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06680.2	5.1e-22	83.61	Ribosomal L29e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1730		coord: 1..62 e-value: 2.0E-29 score: 103.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	PANTHER	PTHR12884:SF30	60S RIBOSOMAL PROTEIN L29	coord: 1..61
IPR002673	Ribosomal protein L29e	PFAM	PF01779	Ribosomal_L29e	coord: 3..42 e-value: 2.6E-22 score: 78.8
IPR002673	Ribosomal protein L29e	PANTHER	PTHR12884	60S RIBOSOMAL PROTEIN L29	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024704.1	Spg024704.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome