Spg024677 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGAATTCAAAGACAATTGCTTCATCAACCATGTTCTGTTGCATTATGCCTAGAGTTCCATGAAGAATTGGAAGATCATTGGGTTAGCAAGGGAGGTGATCGCTACAACGCTGCGACTTCGGCATCTTCATTTGAAGATTCATCGATTTCGAGCGAATCGGTTTCTTCGTTGGACTTGGCAGATGATGCGTGTTCATCGACTTCGAATGCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTCTTGCTCAACTGCCAATCAAGTAAGTGTTGATGAGATTGCTTGAAATTTCCTTTCCTTCGCGATGAATGAATAGATTCATAAATAAATTATATTCTAAATGAAAGCATCAAGCTAAGCTAGGTTTCAATCTGAACATAGTTCAATTGGTTAAGGTTTAAAAGGTTCGAATTCCCACCCTCACATATTGTTAAACTTGAAAACATCAAGCTAGGTCTTCCCTCGACTACATCCTGCAATTATGAATTCAAATCTACAAGCTAAATATGACTTCTTAAACTACTGTTGGATCAATTTCTAATAGCAATTACTCTATGTGCAGGAGAGGGCTATCCATGTTCTATCAGGGAAAATCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCTTACAGCAGGAGACTGAATGCATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATGCTCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAGAAGTTCTCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTTCATTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGA ATGGGTGGAATTCAAAGACAATTGCTTCATCAACCATGTTCTGTTGCATTATGCCTAGAGTTCCATGAAGAATTGGAAGATCATTGGGTTAGCAAGGGAGGTGATCGCTACAACGCTGCGACTTCGGCATCTTCATTTGAAGATTCATCGATTTCGAGCGAATCGGTTTCTTCGTTGGACTTGGCAGATGATGCGTGTTCATCGACTTCGAATGCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTCTTGCTCAACTGCCAATCAAGAGAGGGCTATCCATGTTCTATCAGGGAAAATCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCTTACAGCAGGAGACTGAATGCATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATGCTCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAGAAGTTCTCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTTCATTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGA ATGGGTGGAATTCAAAGACAATTGCTTCATCAACCATGTTCTGTTGCATTATGCCTAGAGTTCCATGAAGAATTGGAAGATCATTGGGTTAGCAAGGGAGGTGATCGCTACAACGCTGCGACTTCGGCATCTTCATTTGAAGATTCATCGATTTCGAGCGAATCGGTTTCTTCGTTGGACTTGGCAGATGATGCGTGTTCATCGACTTCGAATGCTTCATCTCAATCTAATGGACCATTGGAGGATTTCACAGAGCTTCTTGCTCAACTGCCAATCAAGAGAGGGCTATCCATGTTCTATCAGGGAAAATCTCAGTCTTTTACATCTCTATCAAGTGTAAAGAGCATAGAAGACCTTCCAAAGAAGGAAAATCCTTACAGCAGGAGACTGAATGCATGTAAGAGCTATGCAGGTGGCTTGGACACCCACAAGTCTTCTTATGCTCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAGAAGTTCTCTGTCTTTTGTCCAAGTTAGGAGAGGCAGTTCATTGGCTGGTTGTAGACCTCCTTCCATTCCTGTATATGATGAGAGCTTTTGA MGGIQRQLLHQPCSVALCLEFHEELEDHWVSKGGDRYNAATSASSFEDSSISSESVSSLDLADDACSSTSNASSQSNGPLEDFTELLAQLPIKRGLSMFYQGKSQSFTSLSSVKSIEDLPKKENPYSRRLNACKSYAGGLDTHKSSYALPKAPTFKKASRSSLSFVQVRRGSSLAGCRPPSIPVYDESF Homology
BLAST of Spg024677 vs. NCBI nr
Match: XP_008447561.1 (PREDICTED: uncharacterized protein LOC103489976 [Cucumis melo] >KAA0050854.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa] >TYK08498.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81 Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Spg024677 vs. NCBI nr
Match: XP_038877919.1 (uncharacterized protein LOC120070129 [Benincasa hispida]) HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79 Identity = 162/191 (84.82%), Postives = 171/191 (89.53%), Query Frame = 0
BLAST of Spg024677 vs. NCBI nr
Match: XP_004149181.1 (uncharacterized protein LOC101218329 [Cucumis sativus] >KGN58023.1 hypothetical protein Csa_011606 [Cucumis sativus]) HSP 1 Score: 298.1 bits (762), Expect = 5.3e-77 Identity = 153/190 (80.53%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of Spg024677 vs. NCBI nr
Match: XP_022153661.1 (uncharacterized protein LOC111021114 [Momordica charantia]) HSP 1 Score: 285.0 bits (728), Expect = 4.6e-73 Identity = 152/189 (80.42%), Postives = 164/189 (86.77%), Query Frame = 0
BLAST of Spg024677 vs. NCBI nr
Match: XP_023524906.1 (uncharacterized protein LOC111788696 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 215.7 bits (548), Expect = 3.4e-52 Identity = 123/167 (73.65%), Postives = 133/167 (79.64%), Query Frame = 0
BLAST of Spg024677 vs. ExPASy TrEMBL
Match: A0A5D3CBD2 (Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00260 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 5.9e-82 Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Spg024677 vs. ExPASy TrEMBL
Match: A0A1S3BH50 (uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 5.9e-82 Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 0
BLAST of Spg024677 vs. ExPASy TrEMBL
Match: A0A0A0L8C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G435530 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.6e-77 Identity = 153/190 (80.53%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of Spg024677 vs. ExPASy TrEMBL
Match: A0A6J1DLD1 (uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021114 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73 Identity = 152/189 (80.42%), Postives = 164/189 (86.77%), Query Frame = 0
BLAST of Spg024677 vs. ExPASy TrEMBL
Match: A0A6J1GAT2 (uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC111452482 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.4e-51 Identity = 120/168 (71.43%), Postives = 128/168 (76.19%), Query Frame = 0
BLAST of Spg024677 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 82.0 bits (201), Expect = 5.5e-16 Identity = 59/130 (45.38%), Postives = 77/130 (59.23%), Query Frame = 0
BLAST of Spg024677 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 81.3 bits (199), Expect = 9.4e-16 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Spg024677 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 58.2 bits (139), Expect = 8.6e-09 Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Spg024677 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 57.4 bits (137), Expect = 1.5e-08 Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 0
BLAST of Spg024677 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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