Spg024676 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024676
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein Ycf2
Location	scaffold12: 11198242 .. 11201965 (+)
RNA-Seq Expression	Spg024676
Synteny	Spg024676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGGCAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGAAAGCTATTCGAAATCTTAGTGAAAGGCTGGATTTGTTATCTCATGTTTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACGAAATGTCTTGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCATTTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCAATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGTAGATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCACGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGCAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGGCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCTGGGATGTGATATGGTTCCGAAGGATGAACTGGATATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGTCTGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGGTATTCAACTCCAGGGATGAATCGAAAAAGAAATATTTATTGGTTCTACCTCCTATTTTTTTTGAAGAGAATGAATCTTTTTATCGAAGGATCAGAAAAAAATGGGTCCGGACCTCCCTCGGGAATGATTTGGAAGATCCAAAAAAAAAATAGTGGTATTTGCTAGCAACAACATAATGGAGGCAGTCAATCAATATAGATTGATCCGAAATCTGATTCAAATACAATATAACACCTATGGGTACATAAGAAATGTATTGAATCGATTCTTTTTAATGAATAGATTCGATCGCAACATCGAATATGGAATTCAAAGGGATCAAATAGGAAATGATACTCTGAATCATAGAACTATAATGAAATATACGATCAACCAACATTTATCAAATTTGAAAAAGGGTCAGAAGAAATGGTTCGATCCTCTTATTTTGATATCTCGAACCGAGAGATCCATGAATCGGGATCCTAATGCATATAGATACAAATGGTCCAATGGGAGCAAGAATTTCCAGGAACATTTCATTTCTGAGCAGAAGAGCCATTTTCATTTTCAAGTAGTGTTCGATCGATTACGTATTAATCAATATTCGATTGATTGGTCTGAGGTTATCGATAAAAAAGATTTGTCTAAGTCACTTCGTTTCTTTTTGTCCAAGTTACTTCTTTTTTTGTCCAAGTTTCTTCTCTTTTTGTCTAACTCACTTCCTTTTTTCTTTGTGAGTTTCGGGAATATCCCCATTCATAGGTCCGAGATCCACATCTATGAATTGAAAGGTCCGAATGATCAACTCTGCAATCAGTTGTTAGAATCAATAGGTCTTCAAATCGTTCATTTGAAAAAATTGAAACCCTTCTTATTGGATGATCATGATACTTCCCAAAAATCGAAATTCTTGATCAATGGAGGAACAATATCACCATTTTTGTTCAATAAGATACCAAAGTGGATGGTTGACTCATTCCATACTAGAAATAATCGCAGGAAATCCTTTGATAACACGGATTCCTATTTCTCAATGATATCCCACGATCAAGAGAATTGGCTAAATCCCGTGAAACCATTTCATAGAAGTTCATTGATATCTTCTTTTTATAAAGCAACTCAACTTCGATTCTTGAATAATCCACATCACTTCTGCTTCTATTGTAACAAAAGATTCCCTTTTTATGTGGATTATGTGGAAAAGGCCCGTATCAATAATTATGATTTTACGTATGGACAATTCCTCAATATCTTGTTCATTCGCAACAAAATATTTTCTTTGTGCGGCGGTAAAAAAAAAAACATGCTTTTTTTGGAGAGAGATACTATTTCACCAATCGAGTCACAGGTATCTAACATATTCATACCTAACGATTTTCCACAAAGTGGTGACGAAAGGTATAACTTGTACAAATCTTTCCATTTTCCAATTCGATCCGATCCATTCGTTCGTCGAGCTATTTACTCGATCGCAGACATTTCTGGAACACCTCTAACAGAGGGACAAATAGTCAATTTTGAAAGAACTTATTGTCAACCTCTTTCAGATATGAATCTATCTGATTCAGAGGGGAAGAACTTGCATCAGTATCTCAATTTCAATTCAAACATGGGTTTGATTCACACTCCATGTTCTGAGAAATATTTACCATCCGAAAAGAGGAAAAAACAGAGTCTTTGTCTAAAGAAATGCCTTGAGAAAGGGTAGATGTATAGAACCTTTCAACGAGATAGTGCTTTTTCAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTTTCTATTTTTAGATACTTTTTCAGACCTATTGTCGATACTAAGTAGCAGCCAAAAATTTGTATCCATTTTTCATGATATTATGCATGGATCAAATATATCATGGCGAATTCTTCAGAAAAAATTATGTCTTCCACAATGGAATTTGATAAGTGAGATTTCGAGTAAATGTTTACATAATCTTCTTCTGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCATCGATATCGACACATCTGAGATCGCCAAATGTTCAGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTTAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTAGGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCGATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATTGA

mRNA sequence

ATGATTGGGCAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGAAAGCTATTCGAAATCTTAGTGAAAGGCTGGATTTGTTATCTCATGTTTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACGAAATGTCTTGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCATTTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCAATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGGCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCTGGGATGTGATATGGTTCCGAAGGATGAACTGGATATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGTCTGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTTAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTAGGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCGATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATTGA

Coding sequence (CDS)

ATGATTGGGCAATTGTTTGATCGTCTTTCTCCGAGGAAGAGGCGAAACATAATCAACTTGAATTCGGGAAAGCTATTCGAAATCTTAGTGAAAGGCTGGATTTGTTATCTCATGTTTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGCTTCTTCAAACAACAAGGAGCTGGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAGAAACAAGTGGGCTATTTCTTTGCAAAATTGTGCTCAATTTCATATGTGGCAATTCCACCAAGATCTCTTCTTTAGTTGGGGGAAGAATCCGCACGAATCGGATTTTTTGAGGAACATATCGAGAGAGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACGAAATGTCTTGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCATTTGAAAGGATCTTCTGATCAATCCAGAGATCATTTCGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATCAATCAAAGAGAGATTCAACAACTAAAAGAAAGATCAATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAACAGAGATAGAATCAGACCGATTCCCTAAATGCTTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAATGGTCAGAACTTCATATGGGTTCGAATCCTATTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGGCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCTGGGATGTGATATGGTTCCGAAGGATGAACTGGATATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGTCTGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGTATATCTCGTTCGTACACATCTTCTCTTTGTTTCTCGAGCCTATAGTGAGTTACAGACAGAGTTCGAAAAGGTTAAATCTTTGATGATTCCATCATACATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCCACATCTGAACTGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATATGGGGTTCTGCTTCTGGTGGCAACATGCTAGGGGGTGGCGGTCCCGCTTATGGGGTCAAATCAATACGTTCGAAGAAGAAAGATTGGAATATCGATCTCATCGATCTCATAAGTATCATACCAAATCCCATCAATTGA

Protein sequence

MIGQLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWLDNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSEYHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREKWSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNEEFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWNIDLIDLISIIPNPIN

Homology

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BLAST of Spg024676 vs. NCBI nr
Match: KAB1208330.1 (Protein Ycf2 [Morella rubra] >KAB1228293.1 Protein Ycf2 [Morella rubra])

HSP 1 Score: 812.0 bits (2096), Expect = 3.0e-231
Identity = 488/867 (56.29%), Postives = 493/867 (56.86%), Query Frame = 0


Query: 4    QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
            +LFDRLSPRKRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQ AGSTIQ
Sbjct: 140  ELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQVAGSTIQ 199

Query: 64   SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
            SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLFFSWGKNPHESDFLRNISRENWIWL
Sbjct: 200  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWL 259

Query: 124  DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
            DNVWLVNKDRFFSKVRNV SNIQYDSTRSSFVQVTDSS LKGSSDQS DHFDSISNEDSE
Sbjct: 260  DNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSGDHFDSISNEDSE 319

Query: 184  YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
            YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSRLFTEREK    
Sbjct: 320  YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSRLFTEREKQMNN 379

Query: 244  -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                     WSEL +GSNP ERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 380  HLLPEEIEEFLGNPTRSIRSFFSDRWSELPLGSNPTERSTRDQKLLKKEQDVSFVPSRRS 439

Query: 304  ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
            ENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPF  LFHL
Sbjct: 440  ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFFDLFHL 499

Query: 364  FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 423
            F   NR GYTLHHDFESEERFQEMADLFTLSITEPDL YHKGF FSIDS  LDQKQFLNE
Sbjct: 500  FRDRNRGGYTLHHDFESEERFQEMADLFTLSITEPDLAYHKGFTFSIDSCRLDQKQFLNE 559

Query: 424  ------------------------------------------------------------ 483
                                                                        
Sbjct: 560  VFNSRDESKKKYLLVLPPIFYEENESFYRRIRKKWVRTSCGNDLEDPKPKIVVFASNNIM 619

Query: 484  ------------------------------------------------------------ 525
                                                                        
Sbjct: 620  EAVNQSRLIRNLIQIQYNTCGYIINVLNRFFLMNRSDRNFEYGIQRDQIGNDTLNHRTIM 679

[Close]

BLAST of Spg024676 vs. NCBI nr
Match: KAF4388016.1 (hypothetical protein G4B88_017049, partial [Cannabis sativa])

HSP 1 Score: 789.6 bits (2038), Expect = 1.6e-224
Identity = 434/586 (74.06%), Postives = 448/586 (76.45%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFD LSPRKR+NIINLNS +LF+ILVK WICYLMFAFREKIPIEV+ FFKQQGAGSTIQ
Sbjct: 339 ELFDFLSPRKRQNIINLNSAQLFKILVKDWICYLMFAFREKIPIEVKSFFKQQGAGSTIQ 398

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNK AISLQNCAQFHMWQF QDLFFS GKNPHE DFLRNI RENWIWL
Sbjct: 399 SNDIEHVSHLFSRNKLAISLQNCAQFHMWQFCQDLFFSSGKNPHEPDFLRNILRENWIWL 458

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWL NKDRFFSKVRNV SNIQYDSTR SFVQVTD   LKGSSD+SR HFDSISNE   
Sbjct: 459 DNVWLENKDRFFSKVRNVSSNIQYDSTRYSFVQVTDYRQLKGSSDRSRYHFDSISNE--- 518

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
                                         EIESDRFPKC SGYSSMSRLFTE EK    
Sbjct: 519 ------------------------------EIESDRFPKCLSGYSSMSRLFTECEKQMII 578

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH+GSNP ERSTRDQKLLKKEQDVSF+PSRRS
Sbjct: 579 HLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFIPSRRS 638

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVN+F IITYLQNTVSIHPISSD GCD+VPKDELDMDSSNKISFLNKNPF  L H 
Sbjct: 639 ENKEIVNMFMIITYLQNTVSIHPISSDPGCDIVPKDELDMDSSNKISFLNKNPFFDLVHP 698

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 423
           FH  N+ GYTLHHDFESEERFQEMADLFTLSITE DLVYHKGFA SIDSY LDQKQFLNE
Sbjct: 699 FHDQNKGGYTLHHDFESEERFQEMADLFTLSITELDLVYHKGFALSIDSYRLDQKQFLNE 758

Query: 424 ---------------------------------EFLYSILFLLLVAVYLVRTHLLFVSRA 483
                                            EFLYSILFLLLVA YLVRTHL FVSRA
Sbjct: 759 CLHNLLLSKEMIHRNNESPLISTHLRSPNIRVREFLYSILFLLLVAGYLVRTHLPFVSRA 818

Query: 484 YSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWG 525
           YSELQTEFE+VKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVA E+LGDSLEEI G
Sbjct: 819 YSELQTEFERVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVAWEKLGDSLEEIQG 878

[Close]

BLAST of Spg024676 vs. NCBI nr
Match: PHT72727.1 (Protein Ycf2 [Capsicum annuum])

HSP 1 Score: 779.6 bits (2012), Expect = 1.7e-221
Identity = 417/567 (73.54%), Postives = 440/567 (77.60%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLS RK +N INLNSG LFEILVK WI YLM AFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 122 ELFDRLSLRKSQNRINLNSGSLFEILVKHWISYLMSAFREKIPIEVEGFFKQQGAGSTIQ 181

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLF SWGKNP ESDFLRN+SRENWIWL
Sbjct: 182 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFVSWGKNPPESDFLRNVSRENWIWL 241

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKV+NV SNIQYDSTRSSFVQVTDSS LKGSSDQSRDH DSISNEDSE
Sbjct: 242 DNVWLVNKDRFFSKVQNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHLDSISNEDSE 301

Query: 184 YHTLINQREIQQLKERSIL--WDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK-- 243
           YHTLINQREIQQ KERSIL  WDPSFLQTER EIES RFPKC SGYSSMSRLFTEREK  
Sbjct: 302 YHTLINQREIQQRKERSILWDWDPSFLQTERKEIESGRFPKCLSGYSSMSRLFTEREKQM 361

Query: 244 ---------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSR 303
                                      WSELH+GSNP ERSTRDQKLLKK+QD+SFVPSR
Sbjct: 362 INHLFPEEIEEFLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSR 421

Query: 304 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLF 363
           RSENKE+VNIFKIITYLQNT+SIHPISSDLGCDMVPKDE DMDSSNKISFLNKNPF  LF
Sbjct: 422 RSENKEMVNIFKIITYLQNTISIHPISSDLGCDMVPKDEPDMDSSNKISFLNKNPFFDLF 481

Query: 364 HLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 423
           HLFH  NR GYTLH+DFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQK+FL
Sbjct: 482 HLFHDRNRGGYTLHYDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKKFL 541

Query: 424 NEEFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYP 483
           N                              E + E +K   L++P    E  +   R  
Sbjct: 542 N------------------------------EARDESKKKSLLVLPPIFYEENESFSR-- 601

Query: 484 TSELNSFWLK---------------NLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYG 525
              +   W++               NLFLVALEQLGDSLEEIWGSASGGNML   GPAYG
Sbjct: 602 --RIRKKWVRISCGNDLEDPKPKIVNLFLVALEQLGDSLEEIWGSASGGNML---GPAYG 651

[Close]

BLAST of Spg024676 vs. NCBI nr
Match: PHT26569.1 (Protein Ycf2 [Capsicum baccatum])

HSP 1 Score: 778.9 bits (2010), Expect = 2.8e-221
Identity = 467/850 (54.94%), Postives = 485/850 (57.06%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLS RK +N INLNSG LFEILVK WI YLM AFRE IPIEVEGFFKQQGAGSTIQ
Sbjct: 122 ELFDRLSLRKSQNRINLNSGPLFEILVKHWISYLMSAFREIIPIEVEGFFKQQGAGSTIQ 181

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QD+F SWGKNP +SDFLRN+SRENWIWL
Sbjct: 182 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDIFVSWGKNPPKSDFLRNVSRENWIWL 241

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKV+NV SNIQYDSTRSSFVQVTDSS LKGSSDQSRDH DSISNEDSE
Sbjct: 242 DNVWLVNKDRFFSKVQNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHLDSISNEDSE 301

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQ KERSILWDPSFLQTER EIES RFPKC SGYSSMSRLFT+REK    
Sbjct: 302 YHTLINQREIQQRKERSILWDPSFLQTERKEIESGRFPKCLSGYSSMSRLFTKREKQMIN 361

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH+G+NP ERSTR QKLLKK+QD+SFVPSRRS
Sbjct: 362 HLFPEEIKEFLGNPTRSVRSFFSDRWSELHLGANPTERSTRYQKLLKKQQDLSFVPSRRS 421

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKE+VNIFKIITYLQNTVSIHPISSDLGCDMVPKDE DMDSSNKISFLNKNPF  LFHL
Sbjct: 422 ENKEMVNIFKIITYLQNTVSIHPISSDLGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHL 481

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 423
           FH  NR GYTLH+DFESEERFQEMADLFTLSITEPDLVYHKGFAFSI S GLDQKQFLNE
Sbjct: 482 FHDRNRGGYTLHYDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIVSCGLDQKQFLNE 541

Query: 424 ------------------------------------------------------------ 483
                                                                       
Sbjct: 542 ARDESKNKSLLVLPPIFYEENESFSRRIRKKWVQISCGNDLEDPKPKIVVSNIFIPNDFP 601

Query: 484 ------------------------------------------------------------ 525
                                                                       
Sbjct: 602 QSGDETYNLYKSFHFPSRSDPFVRRAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLS 661

[Close]

BLAST of Spg024676 vs. NCBI nr
Match: QIT04093.1 (Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX48604.1 hypothetical chloroplast RF21 [Luffa aegyptiaca] >QKX48623.1 hypothetical chloroplast RF21 [Luffa aegyptiaca])

HSP 1 Score: 760.4 bits (1962), Expect = 1.0e-215
Identity = 384/422 (91.00%), Postives = 386/422 (91.47%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSPRKRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 230 ELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 289

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLFFSWGKNPHESDFLRNISRENWIWL
Sbjct: 290 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWL 349

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSS LKGSSDQSRDHFDSISNEDSE
Sbjct: 350 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHFDSISNEDSE 409

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK    
Sbjct: 410 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREKQMNN 469

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 470 HPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 529

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPFIYLFHL
Sbjct: 530 ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 589

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 397
           FH  NRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE
Sbjct: 590 FHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 649

[Close]

BLAST of Spg024676 vs. ExPASy Swiss-Prot
Match: B1A978 (Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 2.3e-210
Identity = 372/422 (88.15%), Postives = 376/422 (89.10%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSP KRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 234 ELFDRLSPSKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 293

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLF SWGKNPHESDFLRNISRENWIWL
Sbjct: 294 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFVSWGKNPHESDFLRNISRENWIWL 353

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKVRNV SNIQYDSTRSSFVQVTDSS LKGSSDQ RDHFDSISNEDSE
Sbjct: 354 DNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQFRDHFDSISNEDSE 413

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQLKERSILWDPSFLQTERTEIESD+FPKC SGYSSM RLFTEREK    
Sbjct: 414 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDQFPKCLSGYSSMPRLFTEREKRMNN 473

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH+GSNP ERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 474 HLLPEEIEEFLGNPTRPIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSRRS 533

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPF  LFHL
Sbjct: 534 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFFDLFHL 593

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 397
           FH  NR G TLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE
Sbjct: 594 FHDRNRGGSTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 653

HSP 2 Score: 213.0 bits (541), Expect = 8.1e-54
Identity = 120/133 (90.23%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 395  EFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 454
            EFLYSILFLLLVA YLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS
Sbjct: 1341 EFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 1400

Query: 455  ELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---ID 514
            ELNSFWLKNLFLVALEQLGDSLEEI G  SGGNML G  PAYGVKSIRSKKK  N   ID
Sbjct: 1401 ELNSFWLKNLFLVALEQLGDSLEEIRG--SGGNMLWGSDPAYGVKSIRSKKKYLNINFID 1460

Query: 515  LIDLISIIPNPIN 525
            +IDLISIIPNPIN
Sbjct: 1461 IIDLISIIPNPIN 1471

[Close]

BLAST of Spg024676 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 2.8e-208
Identity = 370/424 (87.26%), Postives = 377/424 (88.92%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSPRKRRNIINLNSG+LFEILVK WICYLM AFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 234 ELFDRLSPRKRRNIINLNSGQLFEILVKHWICYLMSAFREKIPIEVEGFFKQQGAGSTIQ 293

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLF SWGKNPHESDFLRN+SRENWIWL
Sbjct: 294 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFVSWGKNPHESDFLRNVSRENWIWL 353

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKVRNV SNIQYDSTRSSFVQVTDSS LKGSSDQSRDHFDSISNEDS+
Sbjct: 354 DNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHFDSISNEDSK 413

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYS--SMSRLFTEREK-- 243
           YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYS  SMSRLFTEREK  
Sbjct: 414 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSMSRLFTEREKQM 473

Query: 244 ---------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSR 303
                                      WSELH+GSNPIERSTRDQKLLKK+QDVSFVPSR
Sbjct: 474 IIHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKLLKKQQDVSFVPSR 533

Query: 304 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLF 363
           RSENKE+VNIFKIITYLQNTVSIHPISSD GCDMVPKDE DMDSSNKISFLNKNPF  LF
Sbjct: 534 RSENKEMVNIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMDSSNKISFLNKNPFFDLF 593

Query: 364 HLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 397
           HLFH  NR GYTLHHDFESEERFQEMAD FTLSITEPDLVYHKGFAFSIDSYGLDQKQFL
Sbjct: 594 HLFHDRNRGGYTLHHDFESEERFQEMADRFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 653

HSP 2 Score: 221.9 bits (564), Expect = 1.7e-56
Identity = 123/133 (92.48%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 395  EFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 454
            EFLYSILFLLLVA YLVRTHLLFVSRA SELQTEFEKVKSLMIPSYMIELRKLLDRYPTS
Sbjct: 1341 EFLYSILFLLLVAGYLVRTHLLFVSRASSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 1400

Query: 455  ELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---ID 514
            ELNSFWLKNLFLVALEQLGDSLEEI GSASGGNML GGGPAYGVKSIRSKKK  N   ID
Sbjct: 1401 ELNSFWLKNLFLVALEQLGDSLEEIRGSASGGNMLLGGGPAYGVKSIRSKKKYLNINLID 1460

Query: 515  LIDLISIIPNPIN 525
            +IDLISIIPNPIN
Sbjct: 1461 IIDLISIIPNPIN 1473

[Close]

BLAST of Spg024676 vs. ExPASy Swiss-Prot
Match: Q09WV7 (Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 7.0e-207
Identity = 367/424 (86.56%), Postives = 371/424 (87.50%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSPRKRRNIINLNSG+LFEILVK WICYLMFAFREKIPIE EGFFKQQGAGSTIQ
Sbjct: 236 ELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEAEGFFKQQGAGSTIQ 295

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLFFSWGKNPHESDFLRNISRENWIWL
Sbjct: 296 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWL 355

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWL NKDRFFSKVRNV SNIQYDSTRSSFVQVTD S LKGSSD+SRDHFDSI NEDSE
Sbjct: 356 DNVWLENKDRFFSKVRNVSSNIQYDSTRSSFVQVTDFSQLKGSSDRSRDHFDSIRNEDSE 415

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQLKERSILWDPSFLQ ERTEIESDR PKC SGYSSMSRLFTEREK    
Sbjct: 416 YHTLINQREIQQLKERSILWDPSFLQMERTEIESDRSPKCLSGYSSMSRLFTEREKQMNN 475

Query: 244 ---------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSR 303
                                      WSELH+GSNP ERSTRD KLLKKEQDVSFVPSR
Sbjct: 476 HLLPEEIEEFLVLGNRTRSIRSFFSDRWSELHLGSNPTERSTRDHKLLKKEQDVSFVPSR 535

Query: 304 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLF 363
           RSENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPF  LF
Sbjct: 536 RSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFFDLF 595

Query: 364 HLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 397
           HLFH  NR GYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFA SIDSY LDQKQFL
Sbjct: 596 HLFHDRNRGGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFALSIDSYRLDQKQFL 655

HSP 2 Score: 218.0 bits (554), Expect = 2.5e-55
Identity = 119/133 (89.47%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 395  EFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 454
            EFLYSILFLLLVA YLVRTHLLFVSR YSELQTEFE+VKSLMIPSYMIELRKLLDRYPTS
Sbjct: 1343 EFLYSILFLLLVAGYLVRTHLLFVSRTYSELQTEFERVKSLMIPSYMIELRKLLDRYPTS 1402

Query: 455  ELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---ID 514
            ELNSFWLKNLFLVA EQLGDSLEEI GSASGGNML GGGP YGVKSIRSKKK  N   ID
Sbjct: 1403 ELNSFWLKNLFLVAREQLGDSLEEIRGSASGGNMLWGGGPTYGVKSIRSKKKYLNINLID 1462

Query: 515  LIDLISIIPNPIN 525
            +ID ISIIPNPIN
Sbjct: 1463 IIDFISIIPNPIN 1475

[Close]

BLAST of Spg024676 vs. ExPASy Swiss-Prot
Match: Q2L949 (Protein Ycf2 OS=Gossypium hirsutum OX=3635 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 2.0e-206
Identity = 368/422 (87.20%), Postives = 373/422 (88.39%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSP KRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 234 ELFDRLSPSKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 293

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSR KWAISLQNCAQFHMWQF QDLF SWGKNPHESDFLRNISRENWIWL
Sbjct: 294 SNDIEHVSHLFSRGKWAISLQNCAQFHMWQFRQDLFVSWGKNPHESDFLRNISRENWIWL 353

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVN+DRFFSKVRNV SNIQYDSTRSSFVQVTDS  LKGSSDQSRD FDSISNEDSE
Sbjct: 354 DNVWLVNRDRFFSKVRNVSSNIQYDSTRSSFVQVTDSRQLKGSSDQSRDRFDSISNEDSE 413

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSRLFTEREK    
Sbjct: 414 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSRLFTEREKRMNN 473

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH+GSNP ERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 474 HLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSRRS 533

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDEL   SSNKISFLNKNPF  LFHL
Sbjct: 534 ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDEL--GSSNKISFLNKNPFFDLFHL 593

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 397
           FH  NRRGYTLHHDFESEERFQEMADLFTLSITEPDLVY+KGFAFSIDSYGLDQKQFLNE
Sbjct: 594 FHDQNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYYKGFAFSIDSYGLDQKQFLNE 653

HSP 2 Score: 224.9 bits (572), Expect = 2.1e-57
Identity = 123/134 (91.79%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 394  EEFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPT 453
            +EFLYSILFLLLVA YLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPT
Sbjct: 1336 QEFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPT 1395

Query: 454  SELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---I 513
            SELNSFWLKNLFLVALEQLGDSLEEI GSA GGNML GGGPAYGVKSIRSKKK  N   I
Sbjct: 1396 SELNSFWLKNLFLVALEQLGDSLEEIRGSAFGGNMLWGGGPAYGVKSIRSKKKYLNINLI 1455

Query: 514  DLIDLISIIPNPIN 525
            D+IDLISIIPNPIN
Sbjct: 1456 DIIDLISIIPNPIN 1469

[Close]

BLAST of Spg024676 vs. ExPASy Swiss-Prot
Match: A0ZZ78 (Protein Ycf2 OS=Gossypium barbadense OX=3634 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 1.0e-205
Identity = 367/422 (86.97%), Postives = 371/422 (87.91%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSP KRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 234 ELFDRLSPSKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 293

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSR KWAISLQNCAQFHMWQF QDLF SWGKNPHESDFLRNISRENWIWL
Sbjct: 294 SNDIEHVSHLFSRGKWAISLQNCAQFHMWQFRQDLFVSWGKNPHESDFLRNISRENWIWL 353

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVN+DRFFSKVRNV SNIQYDSTRSSFVQVTDS  LKGSSDQSRD FDSISNEDSE
Sbjct: 354 DNVWLVNRDRFFSKVRNVSSNIQYDSTRSSFVQVTDSRQLKGSSDQSRDRFDSISNEDSE 413

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSRLFTEREK    
Sbjct: 414 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSRLFTEREKRMNN 473

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH GSNP ERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 474 HLLPEEIEEFLGNPTRSIRSFFSDRWSELHQGSNPTERSTRDQKLLKKEQDVSFVPSRRS 533

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVNIFKIITYLQNTVS HPISSD GCDMVPKDEL   SSNKISFLNKNPF  LFHL
Sbjct: 534 ENKEIVNIFKIITYLQNTVSFHPISSDPGCDMVPKDEL--GSSNKISFLNKNPFFDLFHL 593

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 397
           FH  NRRGYTLHHDFESEERFQEMADLFTLSITEPDLVY+KGFAFSIDSYGLDQKQFLNE
Sbjct: 594 FHDQNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYYKGFAFSIDSYGLDQKQFLNE 653

HSP 2 Score: 224.9 bits (572), Expect = 2.1e-57
Identity = 123/134 (91.79%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 394  EEFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPT 453
            +EFLYSILFLLLVA YLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPT
Sbjct: 1336 QEFLYSILFLLLVAGYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPT 1395

Query: 454  SELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---I 513
            SELNSFWLKNLFLVALEQLGDSLEEI GSA GGNML GGGPAYGVKSIRSKKK  N   I
Sbjct: 1396 SELNSFWLKNLFLVALEQLGDSLEEIRGSAFGGNMLWGGGPAYGVKSIRSKKKYLNINLI 1455

Query: 514  DLIDLISIIPNPIN 525
            D+IDLISIIPNPIN
Sbjct: 1456 DIIDLISIIPNPIN 1469

[Close]

BLAST of Spg024676 vs. ExPASy TrEMBL
Match: A0A6A1WUF4 (Protein Ycf2 OS=Morella rubra OX=262757 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.5e-231
Identity = 488/867 (56.29%), Postives = 493/867 (56.86%), Query Frame = 0


Query: 4    QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
            +LFDRLSPRKRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQ AGSTIQ
Sbjct: 140  ELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQVAGSTIQ 199

Query: 64   SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
            SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLFFSWGKNPHESDFLRNISRENWIWL
Sbjct: 200  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWL 259

Query: 124  DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
            DNVWLVNKDRFFSKVRNV SNIQYDSTRSSFVQVTDSS LKGSSDQS DHFDSISNEDSE
Sbjct: 260  DNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSGDHFDSISNEDSE 319

Query: 184  YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
            YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKC SGYSSMSRLFTEREK    
Sbjct: 320  YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCLSGYSSMSRLFTEREKQMNN 379

Query: 244  -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                     WSEL +GSNP ERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 380  HLLPEEIEEFLGNPTRSIRSFFSDRWSELPLGSNPTERSTRDQKLLKKEQDVSFVPSRRS 439

Query: 304  ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
            ENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPF  LFHL
Sbjct: 440  ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFFDLFHL 499

Query: 364  FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 423
            F   NR GYTLHHDFESEERFQEMADLFTLSITEPDL YHKGF FSIDS  LDQKQFLNE
Sbjct: 500  FRDRNRGGYTLHHDFESEERFQEMADLFTLSITEPDLAYHKGFTFSIDSCRLDQKQFLNE 559

Query: 424  ------------------------------------------------------------ 483
                                                                        
Sbjct: 560  VFNSRDESKKKYLLVLPPIFYEENESFYRRIRKKWVRTSCGNDLEDPKPKIVVFASNNIM 619

Query: 484  ------------------------------------------------------------ 525
                                                                        
Sbjct: 620  EAVNQSRLIRNLIQIQYNTCGYIINVLNRFFLMNRSDRNFEYGIQRDQIGNDTLNHRTIM 679

[Close]

BLAST of Spg024676 vs. ExPASy TrEMBL
Match: A0A7J6GYH9 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_017049 PE=3 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 7.7e-225
Identity = 434/586 (74.06%), Postives = 448/586 (76.45%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFD LSPRKR+NIINLNS +LF+ILVK WICYLMFAFREKIPIEV+ FFKQQGAGSTIQ
Sbjct: 339 ELFDFLSPRKRQNIINLNSAQLFKILVKDWICYLMFAFREKIPIEVKSFFKQQGAGSTIQ 398

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNK AISLQNCAQFHMWQF QDLFFS GKNPHE DFLRNI RENWIWL
Sbjct: 399 SNDIEHVSHLFSRNKLAISLQNCAQFHMWQFCQDLFFSSGKNPHEPDFLRNILRENWIWL 458

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWL NKDRFFSKVRNV SNIQYDSTR SFVQVTD   LKGSSD+SR HFDSISNE   
Sbjct: 459 DNVWLENKDRFFSKVRNVSSNIQYDSTRYSFVQVTDYRQLKGSSDRSRYHFDSISNE--- 518

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
                                         EIESDRFPKC SGYSSMSRLFTE EK    
Sbjct: 519 ------------------------------EIESDRFPKCLSGYSSMSRLFTECEKQMII 578

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH+GSNP ERSTRDQKLLKKEQDVSF+PSRRS
Sbjct: 579 HLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFIPSRRS 638

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVN+F IITYLQNTVSIHPISSD GCD+VPKDELDMDSSNKISFLNKNPF  L H 
Sbjct: 639 ENKEIVNMFMIITYLQNTVSIHPISSDPGCDIVPKDELDMDSSNKISFLNKNPFFDLVHP 698

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 423
           FH  N+ GYTLHHDFESEERFQEMADLFTLSITE DLVYHKGFA SIDSY LDQKQFLNE
Sbjct: 699 FHDQNKGGYTLHHDFESEERFQEMADLFTLSITELDLVYHKGFALSIDSYRLDQKQFLNE 758

Query: 424 ---------------------------------EFLYSILFLLLVAVYLVRTHLLFVSRA 483
                                            EFLYSILFLLLVA YLVRTHL FVSRA
Sbjct: 759 CLHNLLLSKEMIHRNNESPLISTHLRSPNIRVREFLYSILFLLLVAGYLVRTHLPFVSRA 818

Query: 484 YSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVALEQLGDSLEEIWG 525
           YSELQTEFE+VKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVA E+LGDSLEEI G
Sbjct: 819 YSELQTEFERVKSLMIPSYMIELRKLLDRYPTSELNSFWLKNLFLVAWEKLGDSLEEIQG 878

[Close]

BLAST of Spg024676 vs. ExPASy TrEMBL
Match: A0A2G2YSI8 (Protein Ycf2 OS=Capsicum annuum OX=4072 GN=T459_23512 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 8.0e-222
Identity = 417/567 (73.54%), Postives = 440/567 (77.60%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLS RK +N INLNSG LFEILVK WI YLM AFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 122 ELFDRLSLRKSQNRINLNSGSLFEILVKHWISYLMSAFREKIPIEVEGFFKQQGAGSTIQ 181

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLF SWGKNP ESDFLRN+SRENWIWL
Sbjct: 182 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFVSWGKNPPESDFLRNVSRENWIWL 241

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKV+NV SNIQYDSTRSSFVQVTDSS LKGSSDQSRDH DSISNEDSE
Sbjct: 242 DNVWLVNKDRFFSKVQNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHLDSISNEDSE 301

Query: 184 YHTLINQREIQQLKERSIL--WDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK-- 243
           YHTLINQREIQQ KERSIL  WDPSFLQTER EIES RFPKC SGYSSMSRLFTEREK  
Sbjct: 302 YHTLINQREIQQRKERSILWDWDPSFLQTERKEIESGRFPKCLSGYSSMSRLFTEREKQM 361

Query: 244 ---------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSR 303
                                      WSELH+GSNP ERSTRDQKLLKK+QD+SFVPSR
Sbjct: 362 INHLFPEEIEEFLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSR 421

Query: 304 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLF 363
           RSENKE+VNIFKIITYLQNT+SIHPISSDLGCDMVPKDE DMDSSNKISFLNKNPF  LF
Sbjct: 422 RSENKEMVNIFKIITYLQNTISIHPISSDLGCDMVPKDEPDMDSSNKISFLNKNPFFDLF 481

Query: 364 HLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 423
           HLFH  NR GYTLH+DFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQK+FL
Sbjct: 482 HLFHDRNRGGYTLHYDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKKFL 541

Query: 424 NEEFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYP 483
           N                              E + E +K   L++P    E  +   R  
Sbjct: 542 N------------------------------EARDESKKKSLLVLPPIFYEENESFSR-- 601

Query: 484 TSELNSFWLK---------------NLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYG 525
              +   W++               NLFLVALEQLGDSLEEIWGSASGGNML   GPAYG
Sbjct: 602 --RIRKKWVRISCGNDLEDPKPKIVNLFLVALEQLGDSLEEIWGSASGGNML---GPAYG 651

[Close]

BLAST of Spg024676 vs. ExPASy TrEMBL
Match: A0A2G2V0S4 (Protein Ycf2 OS=Capsicum baccatum OX=33114 GN=CQW23_33832 PE=4 SV=1)

HSP 1 Score: 778.9 bits (2010), Expect = 1.4e-221
Identity = 467/850 (54.94%), Postives = 485/850 (57.06%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLS RK +N INLNSG LFEILVK WI YLM AFRE IPIEVEGFFKQQGAGSTIQ
Sbjct: 122 ELFDRLSLRKSQNRINLNSGPLFEILVKHWISYLMSAFREIIPIEVEGFFKQQGAGSTIQ 181

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QD+F SWGKNP +SDFLRN+SRENWIWL
Sbjct: 182 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDIFVSWGKNPPKSDFLRNVSRENWIWL 241

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKV+NV SNIQYDSTRSSFVQVTDSS LKGSSDQSRDH DSISNEDSE
Sbjct: 242 DNVWLVNKDRFFSKVQNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHLDSISNEDSE 301

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQ KERSILWDPSFLQTER EIES RFPKC SGYSSMSRLFT+REK    
Sbjct: 302 YHTLINQREIQQRKERSILWDPSFLQTERKEIESGRFPKCLSGYSSMSRLFTKREKQMIN 361

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELH+G+NP ERSTR QKLLKK+QD+SFVPSRRS
Sbjct: 362 HLFPEEIKEFLGNPTRSVRSFFSDRWSELHLGANPTERSTRYQKLLKKQQDLSFVPSRRS 421

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKE+VNIFKIITYLQNTVSIHPISSDLGCDMVPKDE DMDSSNKISFLNKNPF  LFHL
Sbjct: 422 ENKEMVNIFKIITYLQNTVSIHPISSDLGCDMVPKDEPDMDSSNKISFLNKNPFFDLFHL 481

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 423
           FH  NR GYTLH+DFESEERFQEMADLFTLSITEPDLVYHKGFAFSI S GLDQKQFLNE
Sbjct: 482 FHDRNRGGYTLHYDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIVSCGLDQKQFLNE 541

Query: 424 ------------------------------------------------------------ 483
                                                                       
Sbjct: 542 ARDESKNKSLLVLPPIFYEENESFSRRIRKKWVQISCGNDLEDPKPKIVVSNIFIPNDFP 601

Query: 484 ------------------------------------------------------------ 525
                                                                       
Sbjct: 602 QSGDETYNLYKSFHFPSRSDPFVRRAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLS 661

[Close]

BLAST of Spg024676 vs. ExPASy TrEMBL
Match: A0A6M3RUH1 (Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 5.0e-216
Identity = 384/422 (91.00%), Postives = 386/422 (91.47%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSPRKRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGFFKQQGAGSTIQ
Sbjct: 230 ELFDRLSPRKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 289

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQF QDLFFSWGKNPHESDFLRNISRENWIWL
Sbjct: 290 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFRQDLFFSWGKNPHESDFLRNISRENWIWL 349

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSS LKGSSDQSRDHFDSISNEDSE
Sbjct: 350 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHFDSISNEDSE 409

Query: 184 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK---- 243
           YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK    
Sbjct: 410 YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREKQMNN 469

Query: 244 -------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 303
                                    WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS
Sbjct: 470 HPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRS 529

Query: 304 ENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 363
           ENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPFIYLFHL
Sbjct: 530 ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 589

Query: 364 FHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 397
           FH  NRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE
Sbjct: 590 FHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 649

[Close]

BLAST of Spg024676 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 687.2 bits (1772), Expect = 1.0e-197
Identity = 358/424 (84.43%), Postives = 363/424 (85.61%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSP KRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGF KQQGAGSTIQ
Sbjct: 234 ELFDRLSPSKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFCKQQGAGSTIQ 293

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLF SWGKNPHESDF R ISRENWIWL
Sbjct: 294 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFVSWGKNPHESDFFRKISRENWIWL 353

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKVRNV SNIQYDSTRSSFVQVTDSS L GSSDQ  D FDSISNEDSE
Sbjct: 354 DNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLNGSSDQFIDPFDSISNEDSE 413

Query: 184 --YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK-- 243
             YHTLINQREIQQLKERSIL DPSF+QTE  EIESDRFPK  SGYSSM RLFTEREK  
Sbjct: 414 YHYHTLINQREIQQLKERSILLDPSFIQTEGREIESDRFPKYLSGYSSMPRLFTEREKRM 473

Query: 244 ---------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSR 303
                                      WSELH+GSNP ERSTRDQKLLKKEQDVSFVPSR
Sbjct: 474 NNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSR 533

Query: 304 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLF 363
           RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPF  LF
Sbjct: 534 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFFDLF 593

Query: 364 HLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 397
           HLFH   R GYTL H  ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQ+QFL
Sbjct: 594 HLFHERKRGGYTLRH--ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQRQFL 653

HSP 2 Score: 210.7 bits (535), Expect = 2.9e-54
Identity = 117/133 (87.97%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 395  EFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 454
            E LYSILFLLLVA Y+VRTHLLFVSRAYSELQTEFEK+KSLMIPSYMIELRKLLDRYPTS
Sbjct: 1349 EVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTS 1408

Query: 455  ELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---ID 514
            ELNSFWLKNLFLVALEQLGD LEEI G  SGGNML GG PAYGVKSIRSKKKD     ID
Sbjct: 1409 ELNSFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGDPAYGVKSIRSKKKDLKINFID 1468

Query: 515  LIDLISIIPNPIN 525
            +IDLISIIPNPIN
Sbjct: 1469 IIDLISIIPNPIN 1479

[Close]

BLAST of Spg024676 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 687.2 bits (1772), Expect = 1.0e-197
Identity = 358/424 (84.43%), Postives = 363/424 (85.61%), Query Frame = 0


Query: 4   QLFDRLSPRKRRNIINLNSGKLFEILVKGWICYLMFAFREKIPIEVEGFFKQQGAGSTIQ 63
           +LFDRLSP KRRNIINLNSG+LFEILVK WICYLMFAFREKIPIEVEGF KQQGAGSTIQ
Sbjct: 234 ELFDRLSPSKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFCKQQGAGSTIQ 293

Query: 64  SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFFSWGKNPHESDFLRNISRENWIWL 123
           SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLF SWGKNPHESDF R ISRENWIWL
Sbjct: 294 SNDIEHVSHLFSRNKWAISLQNCAQFHMWQFHQDLFVSWGKNPHESDFFRKISRENWIWL 353

Query: 124 DNVWLVNKDRFFSKVRNVLSNIQYDSTRSSFVQVTDSSHLKGSSDQSRDHFDSISNEDSE 183
           DNVWLVNKDRFFSKVRNV SNIQYDSTRSSFVQVTDSS L GSSDQ  D FDSISNEDSE
Sbjct: 354 DNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLNGSSDQFIDPFDSISNEDSE 413

Query: 184 --YHTLINQREIQQLKERSILWDPSFLQTERTEIESDRFPKCFSGYSSMSRLFTEREK-- 243
             YHTLINQREIQQLKERSIL DPSF+QTE  EIESDRFPK  SGYSSM RLFTEREK  
Sbjct: 414 YHYHTLINQREIQQLKERSILLDPSFIQTEGREIESDRFPKYLSGYSSMPRLFTEREKRM 473

Query: 244 ---------------------------WSELHMGSNPIERSTRDQKLLKKEQDVSFVPSR 303
                                      WSELH+GSNP ERSTRDQKLLKKEQDVSFVPSR
Sbjct: 474 NNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSR 533

Query: 304 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFIYLF 363
           RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPF  LF
Sbjct: 534 RSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFFDLF 593

Query: 364 HLFHVWNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFL 397
           HLFH   R GYTL H  ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQ+QFL
Sbjct: 594 HLFHERKRGGYTLRH--ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQRQFL 653

HSP 2 Score: 210.7 bits (535), Expect = 2.9e-54
Identity = 117/133 (87.97%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 395  EFLYSILFLLLVAVYLVRTHLLFVSRAYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTS 454
            E LYSILFLLLVA Y+VRTHLLFVSRAYSELQTEFEK+KSLMIPSYMIELRKLLDRYPTS
Sbjct: 1349 EVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTS 1408

Query: 455  ELNSFWLKNLFLVALEQLGDSLEEIWGSASGGNMLGGGGPAYGVKSIRSKKKDWN---ID 514
            ELNSFWLKNLFLVALEQLGD LEEI G  SGGNML GG PAYGVKSIRSKKKD     ID
Sbjct: 1409 ELNSFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGDPAYGVKSIRSKKKDLKINFID 1468

Query: 515  LIDLISIIPNPIN 525
            +IDLISIIPNPIN
Sbjct: 1469 IIDLISIIPNPIN 1479

The following BLAST results are available for this feature:

BLAST of Spg024676 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB1208330.1	3.0e-231	56.29	Protein Ycf2 [Morella rubra] >KAB1228293.1 Protein Ycf2 [Morella rubra]	[more]
KAF4388016.1	1.6e-224	74.06	hypothetical protein G4B88_017049, partial [Cannabis sativa]	[more]
PHT72727.1	1.7e-221	73.54	Protein Ycf2 [Capsicum annuum]	[more]
PHT26569.1	2.8e-221	54.94	Protein Ycf2 [Capsicum baccatum]	[more]
QIT04093.1	1.0e-215	91.00	Ycf2 protein [Luffa aegyptiaca] >QIT04110.1 Ycf2 protein [Luffa aegyptiaca] >QKX...	[more]

Pages

BLAST of Spg024676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1A978	2.3e-210	88.15	Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1	[more]
Q0ZIV6	2.8e-208	87.26	Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1	[more]
Q09WV7	7.0e-207	86.56	Protein Ycf2 OS=Morus indica OX=248361 GN=ycf2-A PE=3 SV=1	[more]
Q2L949	2.0e-206	87.20	Protein Ycf2 OS=Gossypium hirsutum OX=3635 GN=ycf2-A PE=3 SV=1	[more]
A0ZZ78	1.0e-205	86.97	Protein Ycf2 OS=Gossypium barbadense OX=3634 GN=ycf2-A PE=3 SV=1	[more]

BLAST of Spg024676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1WUF4	1.5e-231	56.29	Protein Ycf2 OS=Morella rubra OX=262757 GN=ycf2 PE=3 SV=1	[more]
A0A7J6GYH9	7.7e-225	74.06	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Cannabis sativa OX=3...	[more]
A0A2G2YSI8	8.0e-222	73.54	Protein Ycf2 OS=Capsicum annuum OX=4072 GN=T459_23512 PE=4 SV=1	[more]
A0A2G2V0S4	1.4e-221	54.94	Protein Ycf2 OS=Capsicum baccatum OX=33114 GN=CQW23_33832 PE=4 SV=1	[more]
A0A6M3RUH1	5.0e-216	91.00	Protein Ycf2 OS=Trichosanthes rosthornii OX=676073 GN=ycf2 PE=3 SV=1	[more]

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BLAST of Spg024676 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	1.0e-197	84.43	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	1.0e-197	84.43	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 394..524 e-value: 1.6E-74 score: 251.0 coord: 4..239 e-value: 4.2E-153 score: 511.5 coord: 239..396 e-value: 1.4E-94 score: 317.5
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 15..239
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 239..392 coord: 461..524
None	No IPR available	PANTHER	PTHR33078:SF69	BNAA06G19310D PROTEIN	coord: 15..239
None	No IPR available	PANTHER	PTHR33078:SF69	BNAA06G19310D PROTEIN	coord: 461..524
None	No IPR available	PANTHER	PTHR33078:SF69	BNAA06G19310D PROTEIN	coord: 239..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024676.1	Spg024676.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015977	carbon fixation
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity