Spg024674 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024674
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein, chloroplastic
Locationscaffold12: 12985847 .. 12987752 (-)
RNA-Seq ExpressionSpg024674
SyntenySpg024674
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCATGGCTTCCTTTTCCTTCTCCTTCTCCTTCTCTTCCTCGCTCCTGCCTTCTTCGCTTTCTTTCGATCATGGCTCCACTTCCTTTTCCCCCATCTTTCTTTCATCTTCTTCAGACTCCAATACTCGCATTGTTCGCTGTGCATTTGCAGCCCCCGCTAGAAAATCCCCTCCTCCTCCTCCTCCTTCTTCTTCCTCCCCTGTTAAGAAGAGGCACTGGAAGCAAGGTGAATTTCCAGGCATTACAGAGACATCCGCTCCGAAGAAGACCCCTCTCAAGAATGTCAAAAAGAAATTAGACCGCAAGAACAACGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTGTCGGACCATATCGCGAACAAACGGTGGTTTCAAGCTCTTGAGGTCGCTTCCCCTTTCTTTAATTTCACTTTTCGTTTTAGGTTCATTTTCTGCCTCAGCGATTCCTTAACTCTGCAATAATAGTTTTCTTATGTTCTGCACCCCCTCTTTTTGTTACTCCCTCTTCGGTTCTGTTTAATGTTTTGATTTCTTTTCTAACACTGTGATTTGAGACAAAATCGATGAGAGATTGCATAATTTTGTATTATACACTAGACAAAGACTACTTGTTTGGGGATTTCAGGGAAATCCATTATATGCTTTGCAAAGCCTAATTGAAAACGTGAACATTCATGTGCCTTAGTTTGTAGGAATGAAGTGATAATTTGAAGAGTCTGCATAAACTTCTGGCGCTATTGTTTTCACCTCTAACAATTGTAGCTGCTTTAATTCAACCGTTCAGGTGTTTGAAATGCTCCGCGAACAGCCGTTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGAAGATCTGGCCAACCACAGCGTGCACGTAAGCTTTTTGACACAATGGTTGAAGAAAGATGTGAACCTACCTCCGAACTTTACACTGCTTTGCTTGCTGCTTATTGTCGGAACAATCTCATTGATGATGCATTCTCCACTCTTAATCTCATGAAAACCCTCCCTGGCTGCCAGCCTGACGTTTACACTTATAGTACTTTAATCAAGGCTTGTGTCGATGATTCTCGCTTTGAACTAGTTGAATCTTTGTATGAGGAAATGGCCGAACGACTGATAACTCCAAATACGGTAACCCAGAATATAGTCTTAAGTGGGTATGGCAAGATAGGGAAGTATGACCAGATGGAGAAAGTTCTATTAGGAATGCTTGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTTAGTGTGTTTGGTAACAAGGGGCAGATTGAAATGATGGAAAGATGGTATGAAAAATTTCGCAATTTTGGCATCGAGCCAGAAACTCGTACATTTAATATTTTGATCGGTGCTTATGGGAAGAAAAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAACTGCAGTTTCCTTGGACGACCTCGACATACAACAACGTGATTGAAGCTTTTGCAGATGTGGGAGATGCAAAGAACATGGAGTACACATTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGACACCAAGACATTCTGTTGCCTTATAAATGGATATGCCAATGCAGGTCTCTTCCATAAGGTAATTAGCTCAGTTAAGTTGGCAGGAAAATATGAGATTCCCGAGAATACCTCATTTTACAATGCGGTTATATCTGCATGTGCTAAGGCAGAGGATCTGATGGAAATGGACAGAGTATTTAAGCGAATGAAAGATAAACATTGTCAGCCAGATAGCAAAACGTATTCTGTTATGATAGAAGCATATGGAAAGGAAGGCATGAATGACAGGGTTCATTACTTGGAGCTGGAAAAAAAGCAGGTGATTGATGATGCTTCCAATAACGAGTGA

mRNA sequence

ATGGCTGCCATGGCTTCCTTTTCCTTCTCCTTCTCCTTCTCTTCCTCGCTCCTGCCTTCTTCGCTTTCTTTCGATCATGGCTCCACTTCCTTTTCCCCCATCTTTCTTTCATCTTCTTCAGACTCCAATACTCGCATTGTTCGCTGTGCATTTGCAGCCCCCGCTAGAAAATCCCCTCCTCCTCCTCCTCCTTCTTCTTCCTCCCCTGTTAAGAAGAGGCACTGGAAGCAAGGTGAATTTCCAGGCATTACAGAGACATCCGCTCCGAAGAAGACCCCTCTCAAGAATGTCAAAAAGAAATTAGACCGCAAGAACAACGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTCTGCTTTAATTCAACCGTTCAGGTGTTTGAAATGCTCCGCGAACAGCCGTTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGAAGATCTGGCCAACCACAGCGTGCACGTAAGCTTTTTGACACAATGGTTGAAGAAAGATGTGAACCTACCTCCGAACTTTACACTGCTTTGCTTGCTGCTTATTGTCGGAACAATCTCATTGATGATGCATTCTCCACTCTTAATCTCATGAAAACCCTCCCTGGCTGCCAGCCTGACGTTTACACTTATAGTACTTTAATCAAGGCTTGTGTCGATGATTCTCGCTTTGAACTAGTTGAATCTTTGTATGAGGAAATGGCCGAACGACTGATAACTCCAAATACGGTAACCCAGAATATAGTCTTAAGTGGGTATGGCAAGATAGGGAAGTATGACCAGATGGAGAAAGTTCTATTAGGAATGCTTGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTTAGTGTGTTTGGTAACAAGGGGCAGATTGAAATGATGGAAAGATGGTATGAAAAATTTCGCAATTTTGGCATCGAGCCAGAAACTCGTACATTTAATATTTTGATCGGTGCTTATGGGAAGAAAAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAACTGCAGTTTCCTTGGACGACCTCGACATACAACAACGTGATTGAAGCTTTTGCAGATGTGGGAGATGCAAAGAACATGGAGTACACATTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGACACCAAGACATTCTGTTGCCTTATAAATGGATATGCCAATGCAGGTCTCTTCCATAAGGTAATTAGCTCAGTTAAGTTGGCAGGAAAATATGAGATTCCCGAGAATACCTCATTTTACAATGCGGTTATATCTGCATGTGCTAAGGCAGAGGATCTGATGGAAATGGACAGAGTATTTAAGCGAATGAAAGATAAACATTGTCAGCCAGATAGCAAAACGTATTCTGTTATGATAGAAGCATATGGAAAGGAAGGCATGAATGACAGGGTTCATTACTTGGAGCTGGAAAAAAAGCAGGTGATTGATGATGCTTCCAATAACGAGTGA

Coding sequence (CDS)

ATGGCTGCCATGGCTTCCTTTTCCTTCTCCTTCTCCTTCTCTTCCTCGCTCCTGCCTTCTTCGCTTTCTTTCGATCATGGCTCCACTTCCTTTTCCCCCATCTTTCTTTCATCTTCTTCAGACTCCAATACTCGCATTGTTCGCTGTGCATTTGCAGCCCCCGCTAGAAAATCCCCTCCTCCTCCTCCTCCTTCTTCTTCCTCCCCTGTTAAGAAGAGGCACTGGAAGCAAGGTGAATTTCCAGGCATTACAGAGACATCCGCTCCGAAGAAGACCCCTCTCAAGAATGTCAAAAAGAAATTAGACCGCAAGAACAACGCCAAGGCTTGGGCCAACACCGTCACTGAAGCCTTCTGCTTTAATTCAACCGTTCAGGTGTTTGAAATGCTCCGCGAACAGCCGTTTTATGAACCAAAAGAAGGAACTTACATGAAGCTGCTTGTTCTACTTGGAAGATCTGGCCAACCACAGCGTGCACGTAAGCTTTTTGACACAATGGTTGAAGAAAGATGTGAACCTACCTCCGAACTTTACACTGCTTTGCTTGCTGCTTATTGTCGGAACAATCTCATTGATGATGCATTCTCCACTCTTAATCTCATGAAAACCCTCCCTGGCTGCCAGCCTGACGTTTACACTTATAGTACTTTAATCAAGGCTTGTGTCGATGATTCTCGCTTTGAACTAGTTGAATCTTTGTATGAGGAAATGGCCGAACGACTGATAACTCCAAATACGGTAACCCAGAATATAGTCTTAAGTGGGTATGGCAAGATAGGGAAGTATGACCAGATGGAGAAAGTTCTATTAGGAATGCTTGAGAGCACAACTTGTAGACCGGATGTGTGGACAATGAATATAATTCTTAGTGTGTTTGGTAACAAGGGGCAGATTGAAATGATGGAAAGATGGTATGAAAAATTTCGCAATTTTGGCATCGAGCCAGAAACTCGTACATTTAATATTTTGATCGGTGCTTATGGGAAGAAAAGGATGTATGATAAAATGTCTTCTGTGATGGAGTATATGCGCAAACTGCAGTTTCCTTGGACGACCTCGACATACAACAACGTGATTGAAGCTTTTGCAGATGTGGGAGATGCAAAGAACATGGAGTACACATTTGAGCAGATGCGTGCTGAGGGCATGAGAGCAGACACCAAGACATTCTGTTGCCTTATAAATGGATATGCCAATGCAGGTCTCTTCCATAAGGTAATTAGCTCAGTTAAGTTGGCAGGAAAATATGAGATTCCCGAGAATACCTCATTTTACAATGCGGTTATATCTGCATGTGCTAAGGCAGAGGATCTGATGGAAATGGACAGAGTATTTAAGCGAATGAAAGATAAACATTGTCAGCCAGATAGCAAAACGTATTCTGTTATGATAGAAGCATATGGAAAGGAAGGCATGAATGACAGGGTTCATTACTTGGAGCTGGAAAAAAAGCAGGTGATTGATGATGCTTCCAATAACGAGTGA

Protein sequence

MAAMASFSFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPPPPSSSSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLELEKKQVIDDASNNE
Homology
[Close]
BLAST of Spg024674 vs. NCBI nr
Match: XP_038875824.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Benincasa hispida])

HSP 1 Score: 897.1 bits (2317), Expect = 6.7e-257
Identity = 452/492 (91.87%), Postives = 467/492 (94.92%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPPPPSSSSP 69
           SFSFSSSLLPSS+SFDHG+T F PIF+SSSS SN+ IVRCAFAAP RKS PPP  SSSSP
Sbjct: 3   SFSFSSSLLPSSVSFDHGATFFFPIFVSSSSHSNSPIVRCAFAAPTRKS-PPPSISSSSP 62

Query: 70  VKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNST------ 129
            KK+HWKQGEFPGITETS P+KTPLKNVKKKLDRKNNAKAWANTVTEA   + T      
Sbjct: 63  AKKKHWKQGEFPGITETSTPRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHITNKRWLQ 122

Query: 130 -VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALL 189
            ++VFEMLREQPFYEPKEGTYMKLLVLLGRSGQP RAR LFDTM+EERCEPTSELYTALL
Sbjct: 123 ALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARSLFDTMLEERCEPTSELYTALL 182

Query: 190 AAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAERLI 249
           AAYCRNNLID+AFSTLNLMKTLPGCQPDVYTYSTLIKACVD SRFE+VESLYEEMAERLI
Sbjct: 183 AAYCRNNLIDEAFSTLNLMKTLPGCQPDVYTYSTLIKACVDASRFEIVESLYEEMAERLI 242

Query: 250 TPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMME 309
           TPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLES+TCRPDVWTMNIILSVFGNKGQIEMME
Sbjct: 243 TPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESSTCRPDVWTMNIILSVFGNKGQIEMME 302

Query: 310 RWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAF 369
           RWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAF
Sbjct: 303 RWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAF 362

Query: 370 ADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPENT 429
           ADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK+EIPENT
Sbjct: 363 ADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKFEIPENT 422

Query: 430 SFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLELE 489
           SFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYS+MIEAYGKEGMNDRVHYLELE
Sbjct: 423 SFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYGKEGMNDRVHYLELE 482

Query: 490 KKQVIDDASNNE 495
           KKQVID ASNNE
Sbjct: 483 KKQVIDYASNNE 493

[Close]
BLAST of Spg024674 vs. NCBI nr
Match: XP_008458291.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis melo])

HSP 1 Score: 872.5 bits (2253), Expect = 1.8e-249
Identity = 443/497 (89.13%), Postives = 460/497 (92.56%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDS-----NTRIVRCAFAAPARKSPPPPPP 69
           SFSFSSSLLPSS+SFDH ST   PIF+SSSS S     N+RIVRCAFAAP RKS  P P 
Sbjct: 3   SFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSHPNSRIVRCAFAAPTRKS--PVPS 62

Query: 70  SSSSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFC----- 129
           +SSSP KKRHWKQGEFPGITET   +KTPLKNVKKKLDRKNNAKAWANTVTEA       
Sbjct: 63  TSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISN 122

Query: 130 --FNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSEL 189
             +   ++VFEMLREQPFYEPKEGTYMKLLVLLGRSGQP RAR LFDTM++ERCEPTSEL
Sbjct: 123 KRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSEL 182

Query: 190 YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEM 249
           YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYS LIKACVD SRFE+VESLYEEM
Sbjct: 183 YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEM 242

Query: 250 AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ 309
           A+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFGNKGQ
Sbjct: 243 AQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQ 302

Query: 310 IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 369
           IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN
Sbjct: 303 IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 362

Query: 370 VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYE 429
           VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK E
Sbjct: 363 VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLE 422

Query: 430 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVH 489
           IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTY++M+EAYGKEGMNDRVH
Sbjct: 423 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVH 482

Query: 490 YLELEKKQVIDDASNNE 495
           YLELEKK+VID ASNNE
Sbjct: 483 YLELEKKEVIDYASNNE 497

[Close]
BLAST of Spg024674 vs. NCBI nr
Match: XP_023514865.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 870.2 bits (2247), Expect = 8.8e-249
Identity = 441/501 (88.02%), Postives = 465/501 (92.81%), Query Frame = 0 

Query: 1   MAAMASFSFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPP 60
           MAAMASFSFSFSFSSSLLPSS+S DHG  SFSPI    S  SNT IVRCAFAAPARKSPP
Sbjct: 1   MAAMASFSFSFSFSSSLLPSSVSIDHGFVSFSPIV--PSPHSNTLIVRCAFAAPARKSPP 60

Query: 61  PPPPSSSSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFC- 120
           P P  SSSP KK HWKQGEFPGIT+TSAPKKTPLKNVKKKLDR+N+AKAWANTVTEA   
Sbjct: 61  PSP--SSSPFKKTHWKQGEFPGITQTSAPKKTPLKNVKKKLDRENHAKAWANTVTEALSD 120

Query: 121 ------FNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEP 180
                 +   ++VFEMLREQPFYEPKEGTYMKL+VLLG+SGQP RAR++FD MVEERCE 
Sbjct: 121 HIANKRWLPALEVFEMLREQPFYEPKEGTYMKLIVLLGKSGQPHRARQIFDIMVEERCEA 180

Query: 181 TSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESL 240
           TSELYTAL+AAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVES+
Sbjct: 181 TSELYTALIAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESV 240

Query: 241 YEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFG 300
           YEEMAERLI+PNTVTQNIVLSGYGKIGKY+QMEKVLLGMLEST+CRPDVWTMNIIL VFG
Sbjct: 241 YEEMAERLISPNTVTQNIVLSGYGKIGKYEQMEKVLLGMLESTSCRPDVWTMNIILGVFG 300

Query: 301 NKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTS 360
           N+GQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKM SVMEYMRKLQFPWTTS
Sbjct: 301 NEGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMCSVMEYMRKLQFPWTTS 360

Query: 361 TYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA 420
           TYNNVIEAFADVGDA +MEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA
Sbjct: 361 TYNNVIEAFADVGDATSMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLA 420

Query: 421 GKYEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMN 480
           GKYEIPENTSFYNAVI ACAKAEDLMEMDRVFKRMK+KH QPD+KTYS+MIEAYGK+GMN
Sbjct: 421 GKYEIPENTSFYNAVIYACAKAEDLMEMDRVFKRMKNKHRQPDTKTYSIMIEAYGKQGMN 480

Query: 481 DRVHYLELEKKQVIDDASNNE 495
           DRVHYLE+EKKQVIDDA +NE
Sbjct: 481 DRVHYLEIEKKQVIDDALDNE 497

[Close]
BLAST of Spg024674 vs. NCBI nr
Match: XP_004138596.2 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis sativus] >KGN45620.2 hypothetical protein Csa_005310 [Cucumis sativus])

HSP 1 Score: 866.3 bits (2237), Expect = 1.3e-247
Identity = 440/496 (88.71%), Postives = 456/496 (91.94%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDS----NTRIVRCAFAAPARKSPPPPPPS 69
           SFSFSSSLLPSS+SFDH ST   PIF+SSS  S    N+RIVRCAFAAP RKS  P P +
Sbjct: 13  SFSFSSSLLPSSVSFDHVSTFLFPIFVSSSCSSSSHPNSRIVRCAFAAPTRKS--PVPST 72

Query: 70  SSSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNST-- 129
           SSSP KKRHWKQGEFPG TETS  ++ PLK VKKKLDRKNNAKAWANTVTEA   + T  
Sbjct: 73  SSSPAKKRHWKQGEFPGTTETSTRRRAPLKRVKKKLDRKNNAKAWANTVTEALSDHITNK 132

Query: 130 -----VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELY 189
                ++VFEMLREQPFYEPKEGTYMKLLVLLGRSGQP RAR LFDTMV+ERCEPT ELY
Sbjct: 133 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPTPELY 192

Query: 190 TALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMA 249
           TALLAAYCRNNLIDDAFSTLNLMKTLP CQPDVYTYS LIKACVDDSRFE+VESLYEEMA
Sbjct: 193 TALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYEEMA 252

Query: 250 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQI 309
           ERLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFGNKG I
Sbjct: 253 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHI 312

Query: 310 EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 369
           EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV
Sbjct: 313 EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 372

Query: 370 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEI 429
           IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI SVKLAGK EI
Sbjct: 373 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEI 432

Query: 430 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHY 489
           PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPD+KTYS+M+EAYGKEGMNDRVHY
Sbjct: 433 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDRVHY 492

Query: 490 LELEKKQVIDDASNNE 495
           LELEKKQVID+ASNNE
Sbjct: 493 LELEKKQVIDNASNNE 506

[Close]
BLAST of Spg024674 vs. NCBI nr
Match: XP_022958884.1 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 866.3 bits (2237), Expect = 1.3e-247
Identity = 438/495 (88.48%), Postives = 456/495 (92.12%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPP---PPSS 69
           +FSFSSSLLPSS+SFDHGS+SF PI LS S DSN+R VRC FAAPARKSPPPP     SS
Sbjct: 3   AFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDSNSRAVRCTFAAPARKSPPPPSSSSSSS 62

Query: 70  SSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNST--- 129
           SSPVKK+HWKQGEFPG+TET   +KTPLKNVKKKLDRK NAKAWANTVTEA   + T   
Sbjct: 63  SSPVKKKHWKQGEFPGVTETFDARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITNKR 122

Query: 130 ----VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYT 189
               ++VFEMLR+QPFYEPKEGTYMKLLVLLGRSGQPQRAR LFDTMVEE+CEPT+ELYT
Sbjct: 123 WIQALEVFEMLRKQPFYEPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYT 182

Query: 190 ALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAE 249
           ALLAAYCRNNLIDDAFS LNLMKTLP CQPD+YTYS LIKACVD SRFELVESLYEEMAE
Sbjct: 183 ALLAAYCRNNLIDDAFSLLNLMKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAE 242

Query: 250 RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE 309
           RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE
Sbjct: 243 RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE 302

Query: 310 MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI 369
           MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI
Sbjct: 303 MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI 362

Query: 370 EAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIP 429
           EAFADVGDAKNMEYTF QMRAEGM+ADTKTFCCLINGY+NAGLFHKVI SVKLAGK EIP
Sbjct: 363 EAFADVGDAKNMEYTFTQMRAEGMKADTKTFCCLINGYSNAGLFHKVIGSVKLAGKCEIP 422

Query: 430 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYL 489
           ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYS+MIEAY KE MNDRVHYL
Sbjct: 423 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYL 482

Query: 490 ELEKKQVIDDASNNE 495
           ELE+KQVID A  NE
Sbjct: 483 ELERKQVIDHAPTNE 497

[Close]
BLAST of Spg024674 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 8.7e-191
Identity = 339/488 (69.47%), Postives = 397/488 (81.35%), Query Frame = 0 

Query: 8   SFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPPPPSSS 67
           S S SFSSSL  S +    G   F           +  IVRC  A  A KS P       
Sbjct: 3   SMSLSFSSSLCSSRI--PEGKRRF--------RHRDVGIVRCVLA--ASKSSP------G 62

Query: 68  SPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFC-------F 127
           S  KKR WK GEFPGITE    ++TP+KNVKKKLDR++ A  W NTVTE          +
Sbjct: 63  SVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQW 122

Query: 128 NSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTA 187
              ++VF+MLREQ FY+PKEGTYMKLLVLLG+SGQP RA+KLFD M+EE  EPT ELYTA
Sbjct: 123 LQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTA 182

Query: 188 LLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAER 247
           LLAAY R+NLIDDAFS L+ MK+ P CQPDV+TYSTL+KACVD S+F+LV+SLY+EM ER
Sbjct: 183 LLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 242

Query: 248 LITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEM 307
           LITPNTVTQNIVLSGYG++G++DQMEKVL  ML ST C+PDVWTMNIILSVFGN G+I+M
Sbjct: 243 LITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDM 302

Query: 308 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE 367
           ME WYEKFRNFGIEPETRTFNILIG+YGKKRMYDKMSSVMEYMRKL+FPWTTSTYNN+IE
Sbjct: 303 MESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIE 362

Query: 368 AFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPE 427
           AFADVGDAKNME TF+QMR+EGM+ADTKTFCCLINGYANAGLFHKVISSV+LA K+EIPE
Sbjct: 363 AFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE 422

Query: 428 NTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLE 487
           NT+FYNAVISACAKA+DL+EM+RV+ RMK++ C  DS+T+ +M+EAY KEGMND+++YLE
Sbjct: 423 NTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLE 472

Query: 488 LEKKQVID 489
            E+++++D
Sbjct: 483 QERQKLMD 472

[Close]
BLAST of Spg024674 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 316.2 bits (809), Expect = 6.4e-85
Identity = 164/384 (42.71%), Postives = 225/384 (58.59%), Query Frame = 0 

Query: 103 RKNNAKAWANTVTE-------AFCFNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQ 162
           +K + K    TV E       A  + S +QVFE+LREQ +Y+P  G Y+KL+V+LG+  Q
Sbjct: 106 KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQ 165

Query: 163 PQRARKLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYS 222
           P++A +LF  M+ E C    E+YTAL++AY R+   D AF+ L  MK+   CQPDV+TYS
Sbjct: 166 PEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYS 225

Query: 223 TLIKACVDDSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLES 282
            LIK+ +    F+ V+ L  +M  + I PNT+T N ++  YGK   + +ME  L+ ML  
Sbjct: 226 ILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGE 285

Query: 283 TTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 342
             C+PD WTMN  L  FG  GQIEMME  YEKF++ GIEP  RTFNIL+ +YGK   Y K
Sbjct: 286 DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345

Query: 343 MSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLIN 402
           MS+VMEYM+K  + WT  TYN VI+AF   GD K MEY F  M++E +     T C L+ 
Sbjct: 346 MSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVR 405

Query: 403 GYANAGLFHKVISSVKLAGKYEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQP 462
            Y  A    K+   ++     +I  +  F+N ++ A  + E   EM  V + M+ K  +P
Sbjct: 406 AYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKP 465

Query: 463 DSKTYSVMIEAYGKEGMNDRVHYL 480
           D  TY  M++AY   GM   V  L
Sbjct: 466 DKITYRTMVKAYRISGMTTHVKEL 489

[Close]
BLAST of Spg024674 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.3e-82
Identity = 155/406 (38.18%), Postives = 247/406 (60.84%), Query Frame = 0 

Query: 94  LKNVKKKLDRKNNAKAWANTVTEAF-------CFNSTVQVFEMLREQPFYEPKEGTYMKL 153
           +K +++K + +     W   V EA         + S +++F +LR+Q +YEP+  TY KL
Sbjct: 41  VKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKL 100

Query: 154 LVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPG 213
             +LG   QP +A  LF+ M+ E  +PT ++YT+L++ Y ++ L+D AFSTL  MK++  
Sbjct: 101 FKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD 160

Query: 214 CQPDVYTYSTLIKACVDDSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQME 273
           C+PDV+T++ LI  C    RF+LV+S+  EM+   +  +TVT N ++ GYGK G +++ME
Sbjct: 161 CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEME 220

Query: 274 KVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGA 333
            VL  M+E     PDV T+N I+  +GN   +  ME WY +F+  G++P+  TFNILI +
Sbjct: 221 SVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILS 280

Query: 334 YGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRAD 393
           +GK  MY KM SVM++M K  F  TT TYN VIE F   G  + M+  F +M+ +G++ +
Sbjct: 281 FGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPN 340

Query: 394 TKTFCCLINGYANAGLFHKVISSVKLAGKYEIPENTSFYNAVISACAKAEDLMEMDRVFK 453
           + T+C L+N Y+ AGL  K+ S ++     ++  +T F+N +I+A  +A DL  M  ++ 
Sbjct: 341 SITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYI 400

Query: 454 RMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLELEKKQVIDDASN 493
           +M+++ C+PD  T++ MI+ Y   G+ D V  LE   KQ+I    N
Sbjct: 401 QMEERKCKPDKITFATMIKTYTAHGIFDAVQELE---KQMISSGEN 443

[Close]
BLAST of Spg024674 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.7e-41
Identity = 105/376 (27.93%), Postives = 179/376 (47.61%), Query Frame = 0 

Query: 124 VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLA 183
           + VF  +++Q +Y    G Y KL+ ++GR GQ + A  LF  M    C+P + +Y +L+ 
Sbjct: 108 LDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIG 167

Query: 184 AYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAE 243
           A+     +   +  A      MK +  CQP + TY+ L++A       + V+ L++++ E
Sbjct: 168 AHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDE 227

Query: 244 RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE 303
            +++P+  T N VL  YGK G   +ME VL+ M +ST CRPDV T NI++  +G K   +
Sbjct: 228 SVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRM-KSTQCRPDVITFNILIDSYGRKQTFD 287

Query: 304 MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI 363
            ME+ ++        P   TFN +I  YG+ R+ +K  SV+E M +L F     T   +I
Sbjct: 288 KMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLI 347

Query: 364 EAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIP 423
             +A           F+++     +    +   ++  Y   GL  +    +  A +  + 
Sbjct: 348 IMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVV 407

Query: 424 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVH-Y 483
            N S Y  +  A  KA D + + ++ KRM  +   P+ K +   +EA+G      R    
Sbjct: 408 PNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTSDRKPRTSPG 467

Query: 484 LELEKKQVIDDASNNE 495
           +    K   D A ++E
Sbjct: 468 INSASKPSTDSAGDSE 482

[Close]
BLAST of Spg024674 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-40
Identity = 106/351 (30.20%), Postives = 167/351 (47.58%), Query Frame = 0 

Query: 125 QVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLAA 184
           QVFE ++   F   K  TY  LL + G+S +P+ A K+ + MV     P+   Y +L++A
Sbjct: 300 QVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 359

Query: 185 YCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAERLITP 244
           Y R+ ++D+A    N M    G +PDV+TY+TL+       + E   S++EEM      P
Sbjct: 360 YARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 419

Query: 245 NTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERW 304
           N  T N  +  YG  GK+ +M K+    +      PD+ T N +L+VFG  G    +   
Sbjct: 420 NICTFNAFIKMYGNRGKFTEMMKI-FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 479

Query: 305 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFAD 364
           +++ +  G  PE  TFN LI AY +   +++  +V   M         STYN V+ A A 
Sbjct: 480 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 539

Query: 365 VGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANA---GLFHKVISSVKLAGKYEIPEN 424
            G  +  E    +M     + +  T+C L++ YAN    GL H +   V       I   
Sbjct: 540 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG---VIEPR 599

Query: 425 TSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGM 473
                 ++  C+K + L E +R F  +K++   PD  T + M+  YG+  M
Sbjct: 600 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644

[Close]
BLAST of Spg024674 vs. ExPASy TrEMBL
Match: A0A1S3C7L9 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497754 PE=4 SV=1)

HSP 1 Score: 872.5 bits (2253), Expect = 8.6e-250
Identity = 443/497 (89.13%), Postives = 460/497 (92.56%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDS-----NTRIVRCAFAAPARKSPPPPPP 69
           SFSFSSSLLPSS+SFDH ST   PIF+SSSS S     N+RIVRCAFAAP RKS  P P 
Sbjct: 3   SFSFSSSLLPSSVSFDHVSTFLFPIFVSSSSSSSSSHPNSRIVRCAFAAPTRKS--PVPS 62

Query: 70  SSSSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFC----- 129
           +SSSP KKRHWKQGEFPGITET   +KTPLKNVKKKLDRKNNAKAWANTVTEA       
Sbjct: 63  TSSSPAKKRHWKQGEFPGITETPTRRKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISN 122

Query: 130 --FNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSEL 189
             +   ++VFEMLREQPFYEPKEGTYMKLLVLLGRSGQP RAR LFDTM++ERCEPTSEL
Sbjct: 123 KRWLEALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMLQERCEPTSEL 182

Query: 190 YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEM 249
           YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYS LIKACVD SRFE+VESLYEEM
Sbjct: 183 YTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSILIKACVDASRFEIVESLYEEM 242

Query: 250 AERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQ 309
           A+RLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFGNKGQ
Sbjct: 243 AQRLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGQ 302

Query: 310 IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 369
           IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN
Sbjct: 303 IEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 362

Query: 370 VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYE 429
           VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGK E
Sbjct: 363 VIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKLE 422

Query: 430 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVH 489
           IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTY++M+EAYGKEGMNDRVH
Sbjct: 423 IPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYNIMMEAYGKEGMNDRVH 482

Query: 490 YLELEKKQVIDDASNNE 495
           YLELEKK+VID ASNNE
Sbjct: 483 YLELEKKEVIDYASNNE 497

[Close]
BLAST of Spg024674 vs. ExPASy TrEMBL
Match: A0A0A0K7C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000680 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 6.1e-248
Identity = 440/496 (88.71%), Postives = 456/496 (91.94%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDS----NTRIVRCAFAAPARKSPPPPPPS 69
           SFSFSSSLLPSS+SFDH ST   PIF+SSS  S    N+RIVRCAFAAP RKS  P P +
Sbjct: 3   SFSFSSSLLPSSVSFDHVSTFLFPIFVSSSCSSSSHPNSRIVRCAFAAPTRKS--PVPST 62

Query: 70  SSSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNST-- 129
           SSSP KKRHWKQGEFPG TETS  ++ PLK VKKKLDRKNNAKAWANTVTEA   + T  
Sbjct: 63  SSSPAKKRHWKQGEFPGTTETSTRRRAPLKRVKKKLDRKNNAKAWANTVTEALSDHITNK 122

Query: 130 -----VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELY 189
                ++VFEMLREQPFYEPKEGTYMKLLVLLGRSGQP RAR LFDTMV+ERCEPT ELY
Sbjct: 123 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPTPELY 182

Query: 190 TALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMA 249
           TALLAAYCRNNLIDDAFSTLNLMKTLP CQPDVYTYS LIKACVDDSRFE+VESLYEEMA
Sbjct: 183 TALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLYEEMA 242

Query: 250 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQI 309
           ERLITPNTVTQNIVLSGYGKIGKYDQMEKVL+GMLESTTCRPDVWTMNIILSVFGNKG I
Sbjct: 243 ERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHI 302

Query: 310 EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 369
           EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV
Sbjct: 303 EMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNV 362

Query: 370 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEI 429
           IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVI SVKLAGK EI
Sbjct: 363 IEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEI 422

Query: 430 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHY 489
           PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPD+KTYS+M+EAYGKEGMNDRVHY
Sbjct: 423 PENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDRVHY 482

Query: 490 LELEKKQVIDDASNNE 495
           LELEKKQVID+ASNNE
Sbjct: 483 LELEKKQVIDNASNNE 496

[Close]
BLAST of Spg024674 vs. ExPASy TrEMBL
Match: A0A6J1H6E5 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460035 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 6.1e-248
Identity = 438/495 (88.48%), Postives = 456/495 (92.12%), Query Frame = 0 

Query: 10  SFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPP---PPSS 69
           +FSFSSSLLPSS+SFDHGS+SF PI LS S DSN+R VRC FAAPARKSPPPP     SS
Sbjct: 3   AFSFSSSLLPSSVSFDHGSSSFFPILLSPSFDSNSRAVRCTFAAPARKSPPPPSSSSSSS 62

Query: 70  SSPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNST--- 129
           SSPVKK+HWKQGEFPG+TET   +KTPLKNVKKKLDRK NAKAWANTVTEA   + T   
Sbjct: 63  SSPVKKKHWKQGEFPGVTETFDARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITNKR 122

Query: 130 ----VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYT 189
               ++VFEMLR+QPFYEPKEGTYMKLLVLLGRSGQPQRAR LFDTMVEE+CEPT+ELYT
Sbjct: 123 WIQALEVFEMLRKQPFYEPKEGTYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYT 182

Query: 190 ALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAE 249
           ALLAAYCRNNLIDDAFS LNLMKTLP CQPD+YTYS LIKACVD SRFELVESLYEEMAE
Sbjct: 183 ALLAAYCRNNLIDDAFSLLNLMKTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAE 242

Query: 250 RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE 309
           RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE
Sbjct: 243 RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE 302

Query: 310 MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI 369
           MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI
Sbjct: 303 MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI 362

Query: 370 EAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIP 429
           EAFADVGDAKNMEYTF QMRAEGM+ADTKTFCCLINGY+NAGLFHKVI SVKLAGK EIP
Sbjct: 363 EAFADVGDAKNMEYTFTQMRAEGMKADTKTFCCLINGYSNAGLFHKVIGSVKLAGKCEIP 422

Query: 430 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYL 489
           ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYS+MIEAY KE MNDRVHYL
Sbjct: 423 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYL 482

Query: 490 ELEKKQVIDDASNNE 495
           ELE+KQVID A  NE
Sbjct: 483 ELERKQVIDHAPTNE 497

[Close]
BLAST of Spg024674 vs. ExPASy TrEMBL
Match: A0A6J1L0G6 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499248 PE=4 SV=1)

HSP 1 Score: 862.8 bits (2228), Expect = 6.8e-247
Identity = 442/533 (82.93%), Postives = 462/533 (86.68%), Query Frame = 0 

Query: 8   SFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPP------ 67
           +FSFSFSSSLLPSS+SFDHGS+SF PI LSSS DSN+R+VRC FAAPARKSPPP      
Sbjct: 3   AFSFSFSSSLLPSSVSFDHGSSSFFPILLSSSFDSNSRVVRCTFAAPARKSPPPSSSSSS 62

Query: 68  ---------------------------------PPPSSSSPVKKRHWKQGEFPGITETSA 127
                                            PPP SSSPVKK+HWKQGEFPG+TET  
Sbjct: 63  SSSSPDKKRHWKQGEFPGIIETSAPRMTPARKSPPPFSSSPVKKKHWKQGEFPGVTETFD 122

Query: 128 PKKTPLKNVKKKLDRKNNAKAWANTVTEAFCFNST-------VQVFEMLREQPFYEPKEG 187
            +KTPLKNVKKKLDRK NAKAWANTVTEA   + T       ++VFEMLR+QPFYEPKEG
Sbjct: 123 ARKTPLKNVKKKLDRKMNAKAWANTVTEALSEHITNKRWIQALEVFEMLRKQPFYEPKEG 182

Query: 188 TYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLM 247
           TYMKLLVLLGRSGQPQRAR LFDTMVEE+CEPT+ELYTALLAAYCRNNLIDDAFS LNLM
Sbjct: 183 TYMKLLVLLGRSGQPQRARLLFDTMVEEKCEPTTELYTALLAAYCRNNLIDDAFSILNLM 242

Query: 248 KTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGK 307
           KTLP CQPD+YTYS LIKACVD SRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGK
Sbjct: 243 KTLPCCQPDIYTYSILIKACVDSSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGK 302

Query: 308 YDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFN 367
           YDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFN
Sbjct: 303 YDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFN 362

Query: 368 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAE 427
           ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTF QMRAE
Sbjct: 363 ILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFTQMRAE 422

Query: 428 GMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPENTSFYNAVISACAKAEDLMEM 487
           GM+ADTKTFCCLINGY+NAGLFHKVISSVKLAGK EIPENTSFYNAVISACAKAEDLMEM
Sbjct: 423 GMKADTKTFCCLINGYSNAGLFHKVISSVKLAGKCEIPENTSFYNAVISACAKAEDLMEM 482

Query: 488 DRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLELEKKQVIDDASNNE 495
           DRVFKRMKDKHCQPDSKTYS+MIEAY KE MNDRVHYL+LE+KQVID A  NE
Sbjct: 483 DRVFKRMKDKHCQPDSKTYSIMIEAYEKEAMNDRVHYLKLERKQVIDHAPTNE 535

[Close]
BLAST of Spg024674 vs. ExPASy TrEMBL
Match: A0A6J1CCD9 (pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009924 PE=4 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 3.4e-246
Identity = 440/494 (89.07%), Postives = 452/494 (91.50%), Query Frame = 0 

Query: 8   SFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPPPPSSS 67
           S SFSFSSSLLP S+S D+GSTSFSPI   SSSDSNT IVRCAFAAPARKSPPPPP    
Sbjct: 3   SLSFSFSSSLLP-SVSLDNGSTSFSPILRRSSSDSNTYIVRCAFAAPARKSPPPPP---- 62

Query: 68  SPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFC-------F 127
               KRHWKQGEFPGIT TSAP KTPLKNVKKKLDRKNNAKAWANTVTEA         +
Sbjct: 63  ----KRHWKQGEFPGITGTSAPNKTPLKNVKKKLDRKNNAKAWANTVTEALSDHISKKQW 122

Query: 128 NSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTA 187
              +QVFEMLREQPFYEPKEGTYMKLLVLLGRSGQ  RA +LFDTMVEERCEPTSELYTA
Sbjct: 123 LQALQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQAHRAHQLFDTMVEERCEPTSELYTA 182

Query: 188 LLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAER 247
           LLAAY RNNLIDDAFSTLN MKTLP CQPDVYTYSTLIKACVD SRFELVESLYEEMAER
Sbjct: 183 LLAAYSRNNLIDDAFSTLNHMKTLPRCQPDVYTYSTLIKACVDASRFELVESLYEEMAER 242

Query: 248 LITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEM 307
           LITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLEST+CRPDVWTMNIILSVFGNK QIEM
Sbjct: 243 LITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTSCRPDVWTMNIILSVFGNKEQIEM 302

Query: 308 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE 367
           MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE
Sbjct: 303 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE 362

Query: 368 AFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPE 427
           AFA+VGDAKNMEYTFEQM AEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPE
Sbjct: 363 AFAEVGDAKNMEYTFEQMCAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPE 422

Query: 428 NTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLE 487
           NTSFYN VISACAKA+DL+EMDRVFKRMKDKHCQPD KTYS+MIEAYGKEGMND+VHYLE
Sbjct: 423 NTSFYNVVISACAKADDLIEMDRVFKRMKDKHCQPDCKTYSIMIEAYGKEGMNDKVHYLE 482

Query: 488 LEKKQVIDDASNNE 495
           LEK QVIDDASN +
Sbjct: 483 LEKNQVIDDASNGD 487

[Close]
BLAST of Spg024674 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 667.9 bits (1722), Expect = 6.2e-192
Identity = 339/488 (69.47%), Postives = 397/488 (81.35%), Query Frame = 0 

Query: 8   SFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPPPPPSSS 67
           S S SFSSSL  S +    G   F           +  IVRC  A  A KS P       
Sbjct: 3   SMSLSFSSSLCSSRI--PEGKRRF--------RHRDVGIVRCVLA--ASKSSP------G 62

Query: 68  SPVKKRHWKQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAFC-------F 127
           S  KKR WK GEFPGITE    ++TP+KNVKKKLDR++ A  W NTVTE          +
Sbjct: 63  SVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQW 122

Query: 128 NSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTA 187
              ++VF+MLREQ FY+PKEGTYMKLLVLLG+SGQP RA+KLFD M+EE  EPT ELYTA
Sbjct: 123 LQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTA 182

Query: 188 LLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAER 247
           LLAAY R+NLIDDAFS L+ MK+ P CQPDV+TYSTL+KACVD S+F+LV+SLY+EM ER
Sbjct: 183 LLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 242

Query: 248 LITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEM 307
           LITPNTVTQNIVLSGYG++G++DQMEKVL  ML ST C+PDVWTMNIILSVFGN G+I+M
Sbjct: 243 LITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDM 302

Query: 308 MERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE 367
           ME WYEKFRNFGIEPETRTFNILIG+YGKKRMYDKMSSVMEYMRKL+FPWTTSTYNN+IE
Sbjct: 303 MESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIE 362

Query: 368 AFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIPE 427
           AFADVGDAKNME TF+QMR+EGM+ADTKTFCCLINGYANAGLFHKVISSV+LA K+EIPE
Sbjct: 363 AFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE 422

Query: 428 NTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGMNDRVHYLE 487
           NT+FYNAVISACAKA+DL+EM+RV+ RMK++ C  DS+T+ +M+EAY KEGMND+++YLE
Sbjct: 423 NTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLE 472

Query: 488 LEKKQVID 489
            E+++++D
Sbjct: 483 QERQKLMD 472

[Close]
BLAST of Spg024674 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 316.2 bits (809), Expect = 4.6e-86
Identity = 164/384 (42.71%), Postives = 225/384 (58.59%), Query Frame = 0 

Query: 103 RKNNAKAWANTVTE-------AFCFNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQ 162
           +K + K    TV E       A  + S +QVFE+LREQ +Y+P  G Y+KL+V+LG+  Q
Sbjct: 106 KKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQ 165

Query: 163 PQRARKLFDTMVEERCEPTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYS 222
           P++A +LF  M+ E C    E+YTAL++AY R+   D AF+ L  MK+   CQPDV+TYS
Sbjct: 166 PEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYS 225

Query: 223 TLIKACVDDSRFELVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLES 282
            LIK+ +    F+ V+ L  +M  + I PNT+T N ++  YGK   + +ME  L+ ML  
Sbjct: 226 ILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGE 285

Query: 283 TTCRPDVWTMNIILSVFGNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 342
             C+PD WTMN  L  FG  GQIEMME  YEKF++ GIEP  RTFNIL+ +YGK   Y K
Sbjct: 286 DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345

Query: 343 MSSVMEYMRKLQFPWTTSTYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLIN 402
           MS+VMEYM+K  + WT  TYN VI+AF   GD K MEY F  M++E +     T C L+ 
Sbjct: 346 MSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVR 405

Query: 403 GYANAGLFHKVISSVKLAGKYEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQP 462
            Y  A    K+   ++     +I  +  F+N ++ A  + E   EM  V + M+ K  +P
Sbjct: 406 AYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKP 465

Query: 463 DSKTYSVMIEAYGKEGMNDRVHYL 480
           D  TY  M++AY   GM   V  L
Sbjct: 466 DKITYRTMVKAYRISGMTTHVKEL 489

[Close]
BLAST of Spg024674 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 4.9e-80
Identity = 171/497 (34.41%), Postives = 278/497 (55.94%), Query Frame = 0 

Query: 2   AAMASFSFSFSFSSSLLPSSLSFDHGSTSFSPIFLSSSSDSNTRIVRCAFAAPARKSPPP 61
           +A A+      FS S++   +S        SP++       +     C+   P  ++   
Sbjct: 13  SAYANEIAQLGFSRSVVQQHIS--------SPVYFRCIPTISITPTMCSTKVPNERT--- 72

Query: 62  PPPSSSSPVKKRHW--KQGEFPGITETSAPKKTPLKNVKKKLDRKNNAKAWANTVTEAF- 121
               +S  +  RH    + E   I  T A     +K +++K + +     W   V EA  
Sbjct: 73  -EKMNSGLISTRHQVDPKKELSRILRTDA----AVKGIERKANSEKYLTLWPKAVLEALD 132

Query: 122 ------CFNSTVQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCE 181
                  + S +++F +LR+Q +YEP+  TY KL  +LG   QP +A  LF+ M+ E  +
Sbjct: 133 EAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLK 192

Query: 182 PTSELYTALLAAYCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVES 241
           PT ++YT+L++ Y ++ L+D AFSTL  MK++  C+PDV+T++ LI  C    RF+LV+S
Sbjct: 193 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 252

Query: 242 LYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVF 301
           +  EM+   +  +TVT N ++ GYGK G +++ME VL  M+E     PDV T+N I+  +
Sbjct: 253 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 312

Query: 302 GNKGQIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTT 361
           GN   +  ME WY +F+  G++P+  TFNILI ++GK  MY KM SVM++M K  F  TT
Sbjct: 313 GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTT 372

Query: 362 STYNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKL 421
            TYN VIE F   G  + M+  F +M+ +G++ ++ T+C L+N Y+ AGL  K+ S ++ 
Sbjct: 373 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 432

Query: 422 AGKYEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGM 481
               ++  +T F+N +I+A  +A DL  M  ++ +M+++ C+PD  T++ MI+ Y   G+
Sbjct: 433 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 491

Query: 482 NDRVHYLELEKKQVIDD 490
            D V   ELEK+ +  D
Sbjct: 493 FDAVQ--ELEKQMISSD 491

[Close]
BLAST of Spg024674 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 9.0e-42
Identity = 106/351 (30.20%), Postives = 167/351 (47.58%), Query Frame = 0 

Query: 125 QVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLAA 184
           QVFE ++   F   K  TY  LL + G+S +P+ A K+ + MV     P+   Y +L++A
Sbjct: 300 QVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 359

Query: 185 YCRNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAERLITP 244
           Y R+ ++D+A    N M    G +PDV+TY+TL+       + E   S++EEM      P
Sbjct: 360 YARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 419

Query: 245 NTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIEMMERW 304
           N  T N  +  YG  GK+ +M K+    +      PD+ T N +L+VFG  G    +   
Sbjct: 420 NICTFNAFIKMYGNRGKFTEMMKI-FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 479

Query: 305 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIEAFAD 364
           +++ +  G  PE  TFN LI AY +   +++  +V   M         STYN V+ A A 
Sbjct: 480 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 539

Query: 365 VGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANA---GLFHKVISSVKLAGKYEIPEN 424
            G  +  E    +M     + +  T+C L++ YAN    GL H +   V       I   
Sbjct: 540 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG---VIEPR 599

Query: 425 TSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYGKEGM 473
                 ++  C+K + L E +R F  +K++   PD  T + M+  YG+  M
Sbjct: 600 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644

[Close]
BLAST of Spg024674 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-41
Identity = 94/349 (26.93%), Postives = 169/349 (48.42%), Query Frame = 0 

Query: 124 VQVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPQRARKLFDTMVEERCEPTSELYTALLA 183
           ++VF  +++Q +Y P  G Y KL+ ++G+ GQ + A  LF  M    C P + +Y AL+ 
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176

Query: 184 AYC----RNNLIDDAFSTLNLMKTLPGCQPDVYTYSTLIKACVDDSRFELVESLYEEMAE 243
           A+     +   ++     L+ MK +  CQP+V TY+ L++A     + + V +L++++  
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236

Query: 244 RLITPNTVTQNIVLSGYGKIGKYDQMEKVLLGMLESTTCRPDVWTMNIILSVFGNKGQIE 303
             ++P+  T N V+  YGK G   +ME VL  M  S  C+PD+ T N+++  +G K + E
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGKKQEFE 296

Query: 304 MMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVI 363
            ME+ ++       +P   TFN +I  YGK RM DK   V + M  + +  +  TY  +I
Sbjct: 297 KMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 356

Query: 364 EAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVISSVKLAGKYEIP 423
             +   G        FE++          T   ++  Y   GL+ +       A  + + 
Sbjct: 357 MMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVH 416

Query: 424 ENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDSKTYSVMIEAYG 469
            + S Y  +  A  KA+   ++  + K+M+     P+ + +   +E +G
Sbjct: 417 PDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFG 464

The following BLAST results are available for this feature:
BLAST of Spg024674 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038875824.16.7e-25791.87pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Benincasa ... [more]
XP_008458291.11.8e-24989.13PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic ... [more]
XP_023514865.18.8e-24988.02pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like [Cucur... [more]
XP_004138596.21.3e-24788.71pentatricopeptide repeat-containing protein At3g06430, chloroplastic [Cucumis sa... [more]
XP_022958884.11.3e-24788.48pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor... [more]
BLAST of Spg024674 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SQU68.7e-19169.47Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... [more]
Q9FKC36.4e-8542.71Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
Q9SCP42.3e-8238.18Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... [more]
A7LN875.7e-4127.93Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4... [more]
Q9LYZ91.3e-4030.20Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
BLAST of Spg024674 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C7L98.6e-25089.13pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Cucumis ... [more]
A0A0A0K7C86.1e-24888.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000680 PE=4 SV=1[more]
A0A6J1H6E56.1e-24888.48pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like isofor... [more]
A0A6J1L0G66.8e-24782.93pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like OS=Cuc... [more]
A0A6J1CCD93.4e-24689.07pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Momordic... [more]
BLAST of Spg024674 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G06430.16.2e-19269.47Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48730.14.6e-8642.71Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53170.14.9e-8034.41Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.19.0e-4230.20Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G39620.12.0e-4126.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 347..411
e-value: 1.0E-10
score: 43.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 111..273
e-value: 5.6E-36
score: 126.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 412..486
e-value: 5.5E-15
score: 57.4
coord: 274..346
e-value: 4.0E-14
score: 54.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 319..347
e-value: 4.2E-5
score: 21.5
coord: 354..386
e-value: 4.0E-4
score: 18.4
coord: 284..315
e-value: 0.0021
score: 16.1
coord: 142..174
e-value: 1.4E-4
score: 19.8
coord: 212..245
e-value: 1.7E-5
score: 22.7
coord: 247..281
e-value: 1.3E-4
score: 19.9
coord: 177..211
e-value: 1.3E-6
score: 26.2
coord: 425..457
e-value: 4.6E-8
score: 30.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 350..398
e-value: 1.8E-4
score: 21.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 178..222
e-value: 9.7E-13
score: 48.1
coord: 421..467
e-value: 4.5E-13
score: 49.2
coord: 280..327
e-value: 7.0E-8
score: 32.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 250..274
e-value: 0.073
score: 13.4
coord: 142..171
e-value: 0.052
score: 13.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 281..315
score: 9.656963
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 421..455
score: 11.23539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 316..350
score: 8.549871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 351..385
score: 9.536388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..280
score: 8.834866
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..173
score: 9.821383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..93
NoneNo IPR availablePANTHERPTHR47932:SF4OS03G0309800 PROTEINcoord: 8..489
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 8..489

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024674.1Spg024674.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009553 embryo sac development
biological_process GO:0009555 pollen development
biological_process GO:0048868 pollen tube development
cellular_component GO:0009507 chloroplast
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0019843 rRNA binding