Spg024659 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024659
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	E3 ubiquitin protein ligase RIN2-like
Location	scaffold12: 17669195 .. 17676724 (+)
RNA-Seq Expression	Spg024659
Synteny	Spg024659

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAAAGCGGTTGTCTTTTTGGAAGAAAGTCGTATTCTCTATAGGGGGGAGATTGACGCTAATTCAGTGATTCCTCTCTACTTTCTTTCCCTCTTTAGGTTACCCAAGTCAGTGTGTAGGACTTTGGAAGGGTTCATGAGAAACTTCCTGTGGGAAGGAGTGGATGAGGGTGGTGGGGCTCATCTGATCAGATGGGAAGTTGTTTTTAAACCCAAGGATTTAGGAGGGTTAGACATTGGTAACCTGAGGTATCGCAACGAGGCCCTTTTGGGGAAATGGTTATGACGCTCCTTTAATGAGCCAATCGCTTTGTGGTGGAGGGTTATTGTGAGTTTGTATGGTCCACACCCATTTAAATGGATCTCTAGTGGTAAGTCGAAAGGATCTAGCAAAAACCTCTGGACTGCTATTGCTTCGGGGTTTCCTCTCTTTTCCCAGTTTGTCAAATGTTCCATCGGAGACGGCTTTAATACCTACTTCTGGGAGGATTATTGGGTTGGGGAAAAACCTTTGAGCGTTATGTTCTCTCGTCTTTATCTTTTGTCTGACATGAAGTTTCATTCGGTAGCTTCTGTCTTCCCCAATTCTGACTTCTCTTTGCCTTCCCTAGCTTTTAGTCGCCCCCTCACTGACCGAGAAGTGACAGAGATCACTTGTCTCTTCTCCTTGTTGGCCAACCAGTCTTTTCGTCATGGGGGTAGAGACACTAGGTTCTGGACCCCGGAGCCTTCTACGGGGTTCTCTTGTGCCTCTTTTTTTCGGTCTATTTCTTCTCCCCTTCCTCCTATGGGAGCCTCCATTTTTTCCTCTTTGTGGAAGGTTAAAGTCCCTAAGAAGGTGAAGTTCTTTGCCTGGGAAGTTTTGCATGGTCGGGTGAGCTCATGATCAGATCCAAAGGTTCTCCTCTCTCTTGTTGCGGCCGCAGTGGTGTGCCCTTTGCAGGAGTCAAGAGGAGGATCTTTATCATTTATTTTGGGATTGTCAGTTTGCTTGCTCGATATGGAGTCAGTTCTTCAAAGCTTTTGGGGTTGCTTTGACTTGTAACATGGATTGTTCCTCTATTTTTGAGGAAGTTCTTTGGCATCCCCCTTTTCGTGACAAAGGGAGAGTCCTTTGGCAGGCTTGCTTTTTTGCTTCTTTGTAGGGTATTTGGCTTGAGAGGAATAGTAGAATCTTTAGAGGAGTGGAGAAATCCACGTCTGAGCTATGAGAGACAATTAGATTTAATTCGTCTTTGTGGGCCTCTGGTTCTAAATTTTTCTGTAATTATCAGCTTGGTTTTATTCTCTTAGATTGGGACTCGTTCCTGTAGTTTGGCAGGTGTTTTTGGCGGGCTTGTTTTTTGTATGCCCTCTTGTATTCTTTCATTTTTTTCTCAATGAAACCTTGGTTTCTCATTAAAAAAAAAAAAAAAAGTTTGCTAGTTTAGAGCGGGAAGAAGGGATATTCGTTGTTGGAGTTTAAGCCCCTCTAAGGGTTTTTCTTGTAGATCTCTTTTTTGTTGGTTGTTCAATCCTTCTCCTCCTAGTAAGTCCGTTCTCTCTATTCTGTGGAGGGTGAAAATTCTGAAGAAGATTAGGTTCTTCATTTGGCAACTATCCACGAAAGAGCTTATATGATTGACAAACTTTCGTGGAAGATACCTTCGTTGGAAGGTCCATTTTGTTGCATTTTATGTCGGAAAATGGAGGAAGATTTGGACCATATTTTGTGGACTTGTGATTTTGTTTGATCGGTGTGGGGCTCGTTCTACGAGACGTTTGGGATTCAGATTAGAAGTTTCAGAGACTACAGGGAAATGATCTAAGAGTTCCTCCTCCATTTGCTCTTTCGTGAGAAAGGAAGGGTGTGTGCATTACTGTGGGGCCTATGGGAAGAGAAAAATAATATTTGTGGCCTTGAAAGGGACCCGTTTGATGTTTGGTCCTTTACTAGGTTCTATGTTTCTCTTTGGGTCTCGGTGTCTAAGCCTTTTTGTAATTATTCTCTTGGTACTATCATTCCTTATTTGTGGCCCTTCCTTTAAAGGGGATCTCTTTTGTGGGCTTGTTTTTTCGATGCCCTTGTATTTTTTCATTTTTCAATGAAAGTTGGTTTATTTATATATAAGAAAAAAGAGATTACCCATCCACATAGCAAAGACTGCATATAGAAGGCAGAAGAAACGAAGTAGGAATCTTCCTTTAAAACATTAGTGGTGTTTAGACAACTATTAGGTCAAAGCCATGAAAGAATGTTGATTCGTTTTGGACATTTTGATTTCCACAAATCTGTGAACATATCTTTAGGCATCGGAGAAGGAACCGCATGCTTACTAGAGAGAGATTTGACTGAAAAAACAAAACGATCATTTAGGCACATTGGGAGTTCTATTTATATGGCGGATGTGGAGTGCTCTTAAGTTCTACCGGTTCTTATAGGCCTGCCATCTTTCTATCTCTCCTGTGGAAGTTTTTTTTTTGATAGGAAATCTCTCCTGTGGAAGTTCAAAAGTTCTCTCTTGTATTTTTATCCTCTTGAAGGAGCTGAGGAGACATTGTTTTCTTTCAAATTCAAATGAATCCCAATTTCCCCTTTCAGAGTTTTTCAACGGGTCTCTGAAGACTTCCAAAATGGAGCCATTTTTCCTCTTTAATCAAGGAGAAGCTCGTATCTTGTTAAAAAAGATAATAATAAAAGGTGAGTCAACCTGGCATAAGGCATTATAAACCTCTTCCAAAATGTCAAGCTTCGAGTCCCTGCCCCACCTTGTTTGAACTCAGGAAAATAAATAAATAAATAACTTTTATTTGTGGCAAGATCTGAGTGTCAAGAGGGTTAGGGATCTCAGGAGTTATTCCTCATTAATGGATACTACTTTCTTGTAAATAAAGCTAGTTCTATTATATTCTTATCAACAATGGTCCAAGCCACATGACTTGAAGTCAACTTATATGTTTGCAAATGATTCCCTCTTGTTGACGAGTATGGGTCTCCCTTGTCTCATTGACCAGAAGAACACCATCTATAAGTTGGCTGTCTCTAGTAAAAACTTATTTACGTCTGAAGTTATTTCCACGACCTCATTATCTGATTTGTTTCTGTGATTGACCTCTTGATGATTCTAGACTAAAATTTACTCGGATTATTCATGACTCTATTGCATAGCCTATGGTACTATGATGGTTGTACTTCTCGATCCTTGATTTCAATCTAAGGTTATAAGATTCTGAGTAATAGACAAATGGGTATAATGGCAGGTTCGTTGTGGGAATTGAAAGGTAGTCTTATCCGAAATCTGGGATTTTTCCTCGACATGGCAACATTATTAATGGCACTCGGTCATTATGTGCATATATGGCGACTTCATGGAATGACATTTAATCTCGTGGATGCAGTCCTTTTCCTGAACATTCGGGTAAATTTTATATGACCATTTGTACATTAATATATTAATTTTCGGTTCCAAATTGTTTCATATCCTTTTTTCCTCATTTGAACAGGCCTTATTAAGTGCAATTATAAAGCGTATTAGAGGTTTCATGAAATTGATGAAAGCTTTAGGTGCTTTAGACGCAGCTCTTCCTGATGCAACACCTGAAGAACTGCAGGCATATGATGACGAATGTGCTATCTGCAGGGTATGGAATGTTATGTTAAATCACCTTTTGTCTCTCAGGTTTTAAATGGTCAAAATATGACAAAGTAGGGTAATGACAGGAACCAATGGCCAAGGCTAAGAAGTTAAACTGCAACCACCTTTTTCATCTTGCTTGCTTGAGATCTTGGTATGATTATGTACTTTGCTTATGCAACCACTTCTATATTTTCAAGTATATTAAACAGTGCGACTTAATTACAATGAAAATATCATGCCAGGTTGGATCAAGGTCTAAATGAGTATTATTCATGTCCTACTTGTCGAAAGCCACTTTTTGTAGGCCGACAAGAAAATGATGTAAATCCTCATGCAGGAGAAACTTTTAGTGATGAGCAGCTTGCTCATCAGATAAGTGCAGGACTTAACCGGCAGAATGCTACTATGCCCACCCTTCCTGCTGGGATTTTCCCCAATCAGACACAGAATCCTGTTGAAGGCAGTCCTTGGAGGTCTGTCCCAAACCTTCACATTTTATTTTTCATTTCCAAACATGAGTAATTGATTCTCTTTTGAATCCTTTTATTATTTTCATCAAAAGCTTTTTGAAGTGTTATATTTTCTGTTTAATTTTATGGATAATAGTTGAGTTCTAAGCTATGGAATGGTTATAGCCACTTGAAAAACTTGATGGATGTATGGTTGAGAGAAGCAACCACATTGGGTACGGTACTTTTCCATCCATCAATTATTGTGGAGAAAGAACCTTGAATAAATTTGTTCTTCGGAAAAAAGTATGAGAATGATGGCAATTATAGTTTTTAAAAAGAAGCAAATGGAACATGCCACTTTTTAATTTCTGAGGCCTAAGTTCATTACTTTTATTTATCAACATGCTTCTAATTTAATGGCCTAGTTTCATTCTTTTGGATTGGAGCCCCTTTTATCTAATGGGGTTTCTTTTTTGGGGCTTGTTTTTTTTTTTGTTTGCTCTTGTATTCTTTCATTTATTCTCAATAAAATTGTGGTCCATTATAAAAAAAAAATTTAATGGCCTTTTTGACCACCATTTCAATAAAAATCATTTTATTGAACATTTACATTTCTTTTTCTCTCTCTTAATTTATAGAAGCACAAGTCTTGATCCAAGTTGGTTGCATGATTGGGCTAGCCAGAGCGTGGATGGAGCTGGCCCATCAAATGCTGCTAGATCTGTTGGATTGGGTAGAGTTCAGATGATGATGAGACATCTTGCATCTGTTGGTGAAACTTATGCGCAGACATCCATTGAAGATTCTGCTTGGGGCCTTTGGCCTCTTAATCCATCACAGGTTGTTGCTGGTGGTTCACAAGTTCCTCGGAGTGTTGTTGGAAGACATCCTGCTGGTAGTATAGGTGGTTTAAATATGAATGTGGCTCGTGCTTCAAATGACAATTTAGCCAATATACTTGCCATGGCAGAGACAGTACGAGAAGTTTTGCCTCATGTCCCTGATGAGTTAATTTTCCAGGTAAATTTCAGTTCACCTCTCCTGATGTTCTTCTGGCTTATGGTTTTAGATTGTGTAGTATTACTTGAAATTTATTGGTTCCTTTCATGTTTCCTCCCTTTGAAGCAAGGAAACTTTGGTTTGGATAGTGTATCCAAGTACGACAAATATCAGACACTTAGATATTCCAACTCTTGTGGCATGTATCAACCACATATTAAGCACAACAAATACACGTCAAACACTTGTTAAACAAATTAGATATTTACTAGACACTTGTTAAGCATAATAGACACGTTGACACCATGAACATAAGTTGAACAATTATTGGATACAAAGAAATATAGGGGAAAAGTAATGAATTTTGGGTGAAATTACAAATATATTCCCTTACTTTTGGTAGGTGTGTTTATTTAGTTCTTGAATGTAAAAATCTTCAATTATGTTGGTAGATGCTGAATTGTGAATTTTCATTTTAGAAGGAAATATAATTTTTCATTGATGAAATTAAAAATTAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTTACACTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACTCCGAGGTTTGAGATAAGGAGCACTTTGGTCCCTGCCGTCTATTTTGATGTTAAATCCTAACGGCTGCTGACGTGGCACTATTATTTTAATAAAAAAAATTATTTTTAAAATTTTTTAAATAAAAAAATATTAAAATAAAAAAATATTCTTATTTTTTTACTTTTTTAATTATTTCTCCTTCTCTCTTACTTTTCTTCTTCTTCTCCATCTTCTTCTTCTTCATTAATTTCCTCCTTATCTCCAGCGGCCACCGCTCGCCGGCAGCCGGCCGTCGGCCGTTTTCCCCCTTCTTATCTCCAGGGTCCTCCTCCCTCTCCGACACCGGAATCGAAGGGGGTTTTCCCCCTTTGTTTTCGTTTTTTTTTTTTTATATATATAAAAAAAAACATTGAAAGGAGGGGAGGAAGAAGAAAAAGAAGAAGGGAAAAGAGAAAAAAAAAATTTAGTTGCCGGCGGTGGCTGCCAGCCGCCAGCCGCTGGAGATATGAAGAAGAAGAAGGAAGAAGATGACGATGGAGAAGAAGAAGAAGGAAGAAGATGACGATGGAGAAGAAGAAGAAGAAGGGTAAGAGAGGGAAGGAGAAATAATTAAAATAATAAGAAAATAATAATATTTATATTATTTTTATTTAGAAAATTAAAAAAATATTTTTTTTATTAAAATAATGGTGCCACGTCAGCAGTCCGTTAGGGTTTAACGGCAAATTGGACAGCAGAGACTAAATTGCTCCTTATCTCAAACTTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTAAAAATTAGGAAAGGTATTAACAAATACATGAAATCAAGACCCTGAAAAAATTATACTCTAAACCCATAAGCTTGAAAAGACGAATCTAAAAAGATACCATAAACTTGACAAATGACAACGGTCTAGCTTAAAGATTTATGAAACTTGACAGGCGGACTCCACTTTTCCAAGAAAAACATCTGCCTTTTCTTTTCCTTATACACGAAACTGAAACTTTCATTGAGATCAAATAAAAGAATACAAAAAGGGCACACAAAAAGCCAACCCAACAAGAGAAGTCAGGCCATAACTATACAAAAAAAAAAGTCAAACCTTAACTATACAAGACAAACATCCGATTGCAGCTTTTCATAATCAAGCCTAATCTGAAAACCAAACACTTTGAATTCCAAAACAACTAACCCAGAAGTGGAAAAAAAACTGCTGCTTTGTTCCCAATCTTGGACAAGAACTAAAGGTTCACTATCAACTTCTTTGTTCTAGGGGAGAAAAATTAGAGATGAACTCATCTAAGTTAACTGGAACCAAAATCCTACAAAATCTTCAAATCCACACAGCTATGACAACTCAAAACTGGGATCTTCACCTCAACCAACTCAGGAAAAGCAAACTCCGTTTCTTTAGACTCAAAACAGCAAACCTTCCCGCAAGGACGGGTAGAAACCAACCTTCAATTATTTCTATGGGTCTGATATTTTTTGGAGGATTGGTGGATGGGAGCTAAGGCCACTTGTGCGTTCTTTCAGTGTCTTTATGACTGGTCTTATAAGAGGGGGCCTTCGGTTGCTTTTATCTTGTCTCCTTCTGAGTCGTCACCCTTGCTCTCTTTGGGTCTTTGATAGGCCCTCACTGACCGTGAGTCTCTGGAGGTGGTGGGCCTTCTTTCTATTATCTCCAATGAGAGGGTTTGTCCAGGGAGTAGGGATTGGCCAGCTTGGGATCCTAGTCCATTTGAGGGCTTCTCTTCTCGTTCAGTTTTCTCCATCCTTTGTGCCCCTTCTCCTGAAATTTTTTTCCTGGCAAGTCTTACATAG

mRNA sequence

ATGTTCTCTCGTCTTTATCTTTTGTCTGACATGAAGTTTCATTCGGTAGCTTCTGTCTTCCCCAATTCTGACTTCTCTTTGCCTTCCCTAGCTTTTAGTCGCCCCCTCACTGACCGAGAAGTGACAGAGATCACTTGTCTCTTCTCCTTGTTGGCCAACCAGTCTTTTCGTCATGGGGGTAGAGACACTAGGTTCTGGACCCCGGAGCCTTCTACGGGGTTCTCTTGTGCCTCTTTTTTTCGGTCTATTTCTTCTCCCCTTCCTCCTATGGGAGCCTCCATTTTTTCCTCTTTGTGGAAGGTTAAAGTCCCTAAGAAGGAGTCAAGAGGAGGATCTTTATCATTTATTTTGGGATTGTCAGTTTGCTTGCTCGATATGGAGTCAGTTCTTCAAAGCTTTTGGGGTTGCTTTGACTTGGTATTTGGCTTGAGAGGAATAGTAGAATCTTTAGAGGAGTGGAGAAATCCACGTCTGAGCTATGAGAGACAATTAGATTTAATTCGTTCGTTGTGGGAATTGAAAGGTAGTCTTATCCGAAATCTGGGATTTTTCCTCGACATGGCAACATTATTAATGGCACTCGGTCATTATGTGCATATATGGCGACTTCATGGAATGACATTTAATCTCGTGGATGCAGTCCTTTTCCTGAACATTCGGGCCTTATTAAGTGCAATTATAAAGCGTATTAGAGGTTTCATGAAATTGATGAAAGCTTTAGGTGCTTTAGACGCAGCTCTTCCTGATGCAACACCTGAAGAACTGCAGGCATATGATGACGAATGTGCTATCTGCAGGGAACCAATGGCCAAGGCTAAGAAGTTAAACTGCAACCACCTTTTTCATCTTGCTTGCTTGAGATCTTGGTTGGATCAAGGTCTAAATGAGTATTATTCATGTCCTACTTGTCGAAAGCCACTTTTTGTAGGCCGACAAGAAAATGATGTAAATCCTCATGCAGGAGAAACTTTTAGTGATGAGCAGCTTGCTCATCAGATAAGTGCAGGACTTAACCGGCAGAATGCTACTATGCCCACCCTTCCTGCTGGGATTTTCCCCAATCAGACACAGAATCCTGTTGAAGGCAGTCCTTGGAGAAGCACAAGTCTTGATCCAAGTTGGTTGCATGATTGGGCTAGCCAGAGCGTGGATGGAGCTGGCCCATCAAATGCTGCTAGATCTGTTGGATTGGGTAGAGTTCAGATGATGATGAGACATCTTGCATCTGTTGGTGAAACTTATGCGCAGACATCCATTGAAGATTCTGCTTGGGGCCTTTGGCCTCTTAATCCATCACAGGTTGTTGCTGGTGGTTCACAAGTTCCTCGGAGTGTTGTTGGAAGACATCCTGCTGGTAGTATAGGTGGTTTAAATATGAATGTGGCTCGTGCTTCAAATGACAATTTAGCCAATATACTTGCCATGGCAGAGACAGTACGAGAAGTTTTGCCTCATGTCCCTGATGAGTTAATTTTCCAGGCCCTCACTGACCGTGAGTCTCTGGAGGTGGTGGGCCTTCTTTCTATTATCTCCAATGAGAGGGTTTGTCCAGGGAGTAGGGATTGGCCAGCTTGGGATCCTAGTCCATTTGAGGGCTTCTCTTCTCGTTCAGTTTTCTCCATCCTTTGTGCCCCTTCTCCTGAAATTTTTTTCCTGGCAAGTCTTACATAG

Coding sequence (CDS)

ATGTTCTCTCGTCTTTATCTTTTGTCTGACATGAAGTTTCATTCGGTAGCTTCTGTCTTCCCCAATTCTGACTTCTCTTTGCCTTCCCTAGCTTTTAGTCGCCCCCTCACTGACCGAGAAGTGACAGAGATCACTTGTCTCTTCTCCTTGTTGGCCAACCAGTCTTTTCGTCATGGGGGTAGAGACACTAGGTTCTGGACCCCGGAGCCTTCTACGGGGTTCTCTTGTGCCTCTTTTTTTCGGTCTATTTCTTCTCCCCTTCCTCCTATGGGAGCCTCCATTTTTTCCTCTTTGTGGAAGGTTAAAGTCCCTAAGAAGGAGTCAAGAGGAGGATCTTTATCATTTATTTTGGGATTGTCAGTTTGCTTGCTCGATATGGAGTCAGTTCTTCAAAGCTTTTGGGGTTGCTTTGACTTGGTATTTGGCTTGAGAGGAATAGTAGAATCTTTAGAGGAGTGGAGAAATCCACGTCTGAGCTATGAGAGACAATTAGATTTAATTCGTTCGTTGTGGGAATTGAAAGGTAGTCTTATCCGAAATCTGGGATTTTTCCTCGACATGGCAACATTATTAATGGCACTCGGTCATTATGTGCATATATGGCGACTTCATGGAATGACATTTAATCTCGTGGATGCAGTCCTTTTCCTGAACATTCGGGCCTTATTAAGTGCAATTATAAAGCGTATTAGAGGTTTCATGAAATTGATGAAAGCTTTAGGTGCTTTAGACGCAGCTCTTCCTGATGCAACACCTGAAGAACTGCAGGCATATGATGACGAATGTGCTATCTGCAGGGAACCAATGGCCAAGGCTAAGAAGTTAAACTGCAACCACCTTTTTCATCTTGCTTGCTTGAGATCTTGGTTGGATCAAGGTCTAAATGAGTATTATTCATGTCCTACTTGTCGAAAGCCACTTTTTGTAGGCCGACAAGAAAATGATGTAAATCCTCATGCAGGAGAAACTTTTAGTGATGAGCAGCTTGCTCATCAGATAAGTGCAGGACTTAACCGGCAGAATGCTACTATGCCCACCCTTCCTGCTGGGATTTTCCCCAATCAGACACAGAATCCTGTTGAAGGCAGTCCTTGGAGAAGCACAAGTCTTGATCCAAGTTGGTTGCATGATTGGGCTAGCCAGAGCGTGGATGGAGCTGGCCCATCAAATGCTGCTAGATCTGTTGGATTGGGTAGAGTTCAGATGATGATGAGACATCTTGCATCTGTTGGTGAAACTTATGCGCAGACATCCATTGAAGATTCTGCTTGGGGCCTTTGGCCTCTTAATCCATCACAGGTTGTTGCTGGTGGTTCACAAGTTCCTCGGAGTGTTGTTGGAAGACATCCTGCTGGTAGTATAGGTGGTTTAAATATGAATGTGGCTCGTGCTTCAAATGACAATTTAGCCAATATACTTGCCATGGCAGAGACAGTACGAGAAGTTTTGCCTCATGTCCCTGATGAGTTAATTTTCCAGGCCCTCACTGACCGTGAGTCTCTGGAGGTGGTGGGCCTTCTTTCTATTATCTCCAATGAGAGGGTTTGTCCAGGGAGTAGGGATTGGCCAGCTTGGGATCCTAGTCCATTTGAGGGCTTCTCTTCTCGTTCAGTTTTCTCCATCCTTTGTGCCCCTTCTCCTGAAATTTTTTTCCTGGCAAGTCTTACATAG

Protein sequence

MFSRLYLLSDMKFHSVASVFPNSDFSLPSLAFSRPLTDREVTEITCLFSLLANQSFRHGGRDTRFWTPEPSTGFSCASFFRSISSPLPPMGASIFSSLWKVKVPKKESRGGSLSFILGLSVCLLDMESVLQSFWGCFDLVFGLRGIVESLEEWRNPRLSYERQLDLIRSLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPAGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLASVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNLANILAMAETVREVLPHVPDELIFQALTDRESLEVVGLLSIISNERVCPGSRDWPAWDPSPFEGFSSRSVFSILCAPSPEIFFLASLT

Homology

[Close]

BLAST of Spg024659 vs. NCBI nr
Match: XP_022957821.1 (E3 ubiquitin protein ligase RIN2-like [Cucurbita moschata] >XP_022957822.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita moschata] >XP_022957823.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita moschata])

HSP 1 Score: 632.9 bits (1631), Expect = 2.7e-177
Identity = 323/391 (82.61%), Postives = 342/391 (87.47%), Query Frame = 0


Query: 113 LSFILGLSVCLLDMESVLQSFWGCFDLVFGLRGIVESLEEWRNPRLSYERQLDLIRSLWE 172
           L F   LS+    ++++L   +   D+      +  S E   N ++S    + +  SLWE
Sbjct: 194 LLFFEPLSIAFETLQAILVHGFQLLDI-----WLHHSAENCSNCQISKFFNMTIAGSLWE 253

Query: 173 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRIRG 232
           LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFL+IRALLSAIIKRIR 
Sbjct: 254 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLHIRALLSAIIKRIRV 313

Query: 233 FMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 292
           FMKLMKALGAL AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ
Sbjct: 314 FMKLMKALGALHAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 373

Query: 293 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPAGIF 352
           GLNEYYSCPTCRKPLFVGRQENDVNPHAGETF+DEQLA QISAG+NRQN+ +PTLPAGIF
Sbjct: 374 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFNDEQLARQISAGINRQNSAIPTLPAGIF 433

Query: 353 PNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLASVGE 412
           PNQTQN VEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARS GLGRVQMMMRHLASVGE
Sbjct: 434 PNQTQNTVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSAGLGRVQMMMRHLASVGE 493

Query: 413 TYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNLANI 472
           TYAQTSIE+SAWGLWPLNPSQVVAGGSQVPRSVVGRHP GS GGLNMNV RASNDNLANI
Sbjct: 494 TYAQTSIEESAWGLWPLNPSQVVAGGSQVPRSVVGRHP-GSTGGLNMNVPRASNDNLANI 553

Query: 473 LAMAETVREVLPHVPDELIFQALTDRESLEV 504
           LAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 554 LAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. NCBI nr
Match: XP_023533476.1 (E3 ubiquitin protein ligase RIN2-like [Cucurbita pepo subsp. pepo] >XP_023533477.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita pepo subsp. pepo] >XP_023533478.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.9 bits (1631), Expect = 2.7e-177
Identity = 323/391 (82.61%), Postives = 342/391 (87.47%), Query Frame = 0


Query: 113 LSFILGLSVCLLDMESVLQSFWGCFDLVFGLRGIVESLEEWRNPRLSYERQLDLIRSLWE 172
           L F   LS+    ++++L   +   D+      +  S E   N ++S    + +  SLWE
Sbjct: 194 LLFFEPLSIAFETLQAILVHGFQLLDI-----WLHHSAENCSNCQISKFFNMTIAGSLWE 253

Query: 173 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRIRG 232
           LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFL+IRALLSAIIKRIR 
Sbjct: 254 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLHIRALLSAIIKRIRV 313

Query: 233 FMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 292
           FMKLMKALGAL AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ
Sbjct: 314 FMKLMKALGALHAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 373

Query: 293 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPAGIF 352
           GLNEYYSCPTCRKPLFVGRQENDVNPHAGETF+DEQLA QISAG+NRQN+ +PTLPAGIF
Sbjct: 374 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFNDEQLARQISAGINRQNSAIPTLPAGIF 433

Query: 353 PNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLASVGE 412
           PNQTQN VEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARS GLGRVQMMMRHLASVGE
Sbjct: 434 PNQTQNTVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSAGLGRVQMMMRHLASVGE 493

Query: 413 TYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNLANI 472
           TYAQTSIE+SAWGLWPLNPSQVVAGGSQVPRSVVGRHP GS GGLNMNV RASNDNLANI
Sbjct: 494 TYAQTSIEESAWGLWPLNPSQVVAGGSQVPRSVVGRHP-GSTGGLNMNVPRASNDNLANI 553

Query: 473 LAMAETVREVLPHVPDELIFQALTDRESLEV 504
           LAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 554 LAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. NCBI nr
Match: XP_022995635.1 (E3 ubiquitin protein ligase RIN2-like [Cucurbita maxima] >XP_022995636.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita maxima] >XP_022995637.1 E3 ubiquitin protein ligase RIN2-like [Cucurbita maxima])

HSP 1 Score: 628.6 bits (1620), Expect = 5.0e-176
Identity = 320/391 (81.84%), Postives = 342/391 (87.47%), Query Frame = 0


Query: 113 LSFILGLSVCLLDMESVLQSFWGCFDLVFGLRGIVESLEEWRNPRLSYERQLDLIRSLWE 172
           L F   LS+    ++++L   +   D+      +  S E   N ++S    + +  SLWE
Sbjct: 194 LLFFEPLSIAFETLQAILVHGFQLLDI-----WLHHSAENCSNCQISKFFNMTIAGSLWE 253

Query: 173 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRIRG 232
           LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFL+IRALLSAIIKRIR 
Sbjct: 254 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLHIRALLSAIIKRIRV 313

Query: 233 FMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 292
           FMKLMKALGAL AALP+ATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ
Sbjct: 314 FMKLMKALGALHAALPNATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 373

Query: 293 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPAGIF 352
           GLNEYYSCPTCRKPLFVGRQENDVNPHAG+TF+DEQLA QISAG+NRQNA +PTLPAGIF
Sbjct: 374 GLNEYYSCPTCRKPLFVGRQENDVNPHAGDTFNDEQLARQISAGINRQNAAIPTLPAGIF 433

Query: 353 PNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLASVGE 412
           PNQTQN VEGSPWRSTSLDPSWLHDWASQSVDGAGPSNA+RS GLGRVQMMMRHLASVGE
Sbjct: 434 PNQTQNTVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNASRSAGLGRVQMMMRHLASVGE 493

Query: 413 TYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNLANI 472
           TYAQTSIE+SAWGLWPLNPSQVVAGGSQVPRSVVGRHP G+ GGLNMNV RASNDNLANI
Sbjct: 494 TYAQTSIEESAWGLWPLNPSQVVAGGSQVPRSVVGRHP-GNTGGLNMNVPRASNDNLANI 553

Query: 473 LAMAETVREVLPHVPDELIFQALTDRESLEV 504
           LAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 554 LAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. NCBI nr
Match: XP_008449376.1 (PREDICTED: E3 ubiquitin protein ligase RIN2-like isoform X1 [Cucumis melo])

HSP 1 Score: 628.2 bits (1619), Expect = 6.5e-176
Identity = 311/334 (93.11%), Postives = 321/334 (96.11%), Query Frame = 0


Query: 170 LWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKR 229
           LWELKG+LIRNLGFFLDMATLLMALGHYV+IWRLHGMTFNLVDAVLFLNIRALLSAI+KR
Sbjct: 246 LWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLSAIVKR 305

Query: 230 IRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 289
           IRGFMKL KALGAL+AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW
Sbjct: 306 IRGFMKLRKALGALNAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 365

Query: 290 LDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPA 349
           LDQGLNEYYSCPTCRKPLFVGRQENDVNP AGETFSDEQLA QISAGLNRQNAT+PTLP 
Sbjct: 366 LDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATIPTLPT 425

Query: 350 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLAS 409
           GIFPNQTQNPVEGSPWRSTSLDPSWLHDW SQS+DGAGPSNAARSVGLGRVQMMMRHLAS
Sbjct: 426 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWTSQSMDGAGPSNAARSVGLGRVQMMMRHLAS 485

Query: 410 VGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNL 469
           VGETYAQTSIEDSAW LWPLNPSQVVAGGSQVPR+VVGRHP GS+GGLNMNVARASN+NL
Sbjct: 486 VGETYAQTSIEDSAWSLWPLNPSQVVAGGSQVPRNVVGRHP-GSMGGLNMNVARASNENL 545

Query: 470 ANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           ANILAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 546 ANILAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. NCBI nr
Match: XP_008449377.1 (PREDICTED: E3 ubiquitin protein ligase RIN2-like isoform X2 [Cucumis melo])

HSP 1 Score: 628.2 bits (1619), Expect = 6.5e-176
Identity = 311/334 (93.11%), Postives = 321/334 (96.11%), Query Frame = 0


Query: 170 LWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKR 229
           LWELKG+LIRNLGFFLDMATLLMALGHYV+IWRLHGMTFNLVDAVLFLNIRALLSAI+KR
Sbjct: 234 LWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLSAIVKR 293

Query: 230 IRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 289
           IRGFMKL KALGAL+AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW
Sbjct: 294 IRGFMKLRKALGALNAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 353

Query: 290 LDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPA 349
           LDQGLNEYYSCPTCRKPLFVGRQENDVNP AGETFSDEQLA QISAGLNRQNAT+PTLP 
Sbjct: 354 LDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATIPTLPT 413

Query: 350 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLAS 409
           GIFPNQTQNPVEGSPWRSTSLDPSWLHDW SQS+DGAGPSNAARSVGLGRVQMMMRHLAS
Sbjct: 414 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWTSQSMDGAGPSNAARSVGLGRVQMMMRHLAS 473

Query: 410 VGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNL 469
           VGETYAQTSIEDSAW LWPLNPSQVVAGGSQVPR+VVGRHP GS+GGLNMNVARASN+NL
Sbjct: 474 VGETYAQTSIEDSAWSLWPLNPSQVVAGGSQVPRNVVGRHP-GSMGGLNMNVARASNENL 533

Query: 470 ANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           ANILAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 534 ANILAMAETVREVLPHVPDELIFQDLQRTNSVTV 566

[Close]

BLAST of Spg024659 vs. ExPASy Swiss-Prot
Match: Q8VYC8 (E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana OX=3702 GN=RIN2 PE=1 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.1e-121
Identity = 225/336 (66.96%), Postives = 261/336 (77.68%), Query Frame = 0


Query: 169 SLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIK 228
           SL E KG L RNLGFFLDMATL+MALGHY+HIW LHG+ F+LVDAVLFLNIRALLSAI+K
Sbjct: 244 SLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLSAILK 303

Query: 229 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 288
           RI+G++KL  ALGAL AALPDAT EEL+AYDDECAICREPMAKAK+L+CNHLFHL CLRS
Sbjct: 304 RIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRS 363

Query: 289 WLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLP 348
           WLDQGLNE YSCPTCRKPLFVGR EN+VNP   E  SDEQLA Q    L RQN  +  L 
Sbjct: 364 WLDQGLNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQ----LERQNNPVHALA 423

Query: 349 AGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLA 408
            G+FP +  + VE    R+  LDPSWL  W+SQ  D AGPS  +R+VGLGRVQMMMRHLA
Sbjct: 424 TGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRVQMMMRHLA 483

Query: 409 SVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNM-NVARASND 468
           SVGE+YAQT+++D+AW LWP+NPSQ     + VP    GR      GGL++  V+  +N+
Sbjct: 484 SVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNGGR-----TGGLHLRTVSNTTNE 543

Query: 469 NLANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           +L NILAMAETVREV+PHVPDE+IFQ L    S+ V
Sbjct: 544 SLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAV 570

[Close]

BLAST of Spg024659 vs. ExPASy Swiss-Prot
Match: Q8W4Q5 (E3 ubiquitin protein ligase RIN3 OS=Arabidopsis thaliana OX=3702 GN=RIN3 PE=1 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 3.4e-119
Identity = 217/335 (64.78%), Postives = 256/335 (76.42%), Query Frame = 0


Query: 169 SLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIK 228
           SL E KG L RNLGFFLDMATL+MALGHY+HIW LHGM F+LVDAVLFLNIRALLS+I+K
Sbjct: 244 SLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILK 303

Query: 229 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 288
           RI+G++KL  ALGAL AAL DAT EEL+ YDDECAICREPMAKAK+L+CNHLFHL CLRS
Sbjct: 304 RIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRS 363

Query: 289 WLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLP 348
           WLDQGLNE YSCPTCRKPLFVGR E++ NP  GE  SDE LA Q      RQN ++  L 
Sbjct: 364 WLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQ----FERQNNSVHALT 423

Query: 349 AGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLA 408
            G+FP +T N  E  PWR++ +DPSWL  W+ Q VD  G S  +RSVGLG+VQ+MMRHLA
Sbjct: 424 TGMFPTETPNFTESDPWRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLA 483

Query: 409 SVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDN 468
           SVGE  AQT+++D++WGLWP+NPSQ     + VP    GR      GGL++     + +N
Sbjct: 484 SVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGR-----TGGLHLRTVSRAANN 543

Query: 469 LANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           +A+ILAMAETVREVLPHVPDE+IFQ L    S+ V
Sbjct: 544 MASILAMAETVREVLPHVPDEIIFQDLQRTNSVSV 569

[Close]

BLAST of Spg024659 vs. ExPASy Swiss-Prot
Match: Q9R049 (E3 ubiquitin-protein ligase AMFR OS=Mus musculus OX=10090 GN=Amfr PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-23
Identity = 59/171 (34.50%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 171 WELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRI 230
           WE KG+ +    F +++A L + L H++H+     +  ++   V+F+ +R L   + +RI
Sbjct: 250 WEGKGTYVYYTDFVMELALLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRI 309

Query: 231 RGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWL 290
           R     ++ +G ++A    ATPEEL   +D+CAIC + M  A+KL C HLFH +CLRSWL
Sbjct: 310 RRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWL 369

Query: 291 DQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQN 342
           +Q      SCPTCR  L +         H GE   +  +    + G  R N
Sbjct: 370 EQDT----SCPTCRMSLNIADGSRAREDHQGENLDENLVPVAAAEGRPRLN 416

[Close]

BLAST of Spg024659 vs. ExPASy Swiss-Prot
Match: Q9UKV5 (E3 ubiquitin-protein ligase AMFR OS=Homo sapiens OX=9606 GN=AMFR PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-23
Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 171 WELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRI 230
           WE KG+ +    F +++  L + L H++H+     +  ++   V+F+ +R L   + +RI
Sbjct: 250 WEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRI 309

Query: 231 RGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWL 290
           R     ++ +G ++A    ATPEEL   +D+CAIC + M  A+KL C HLFH +CLRSWL
Sbjct: 310 RRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWL 369

Query: 291 DQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQN 342
           +Q      SCPTCR  L +         H GE   +  +    + G  R N
Sbjct: 370 EQDT----SCPTCRMSLNIADNNRVREEHQGENLDENLVPVAAAEGRPRLN 416

[Close]

BLAST of Spg024659 vs. ExPASy Swiss-Prot
Match: Q5Z880 (ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HRD1 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.3e-16
Identity = 51/144 (35.42%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 166 LIRSLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAV--LFLNIRALL 225
           L+   WE K      L    D+  L + +  ++ I+  +G+  +L+  +   F N R   
Sbjct: 201 LMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYGVPLHLIRELYETFRNFRI-- 260

Query: 226 SAIIKRIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHL 285
                RI  +++  K    ++   PDAT +EL A D  C ICRE M  AKKL C HLFH+
Sbjct: 261 -----RIADYVRYRKITSNMNERFPDATADELNASDATCIICREEMTTAKKLLCGHLFHV 320

Query: 286 ACLRSWLDQGLNEYYSCPTCRKPL 308
            CLRSWL++     ++CPTCR P+
Sbjct: 321 HCLRSWLER----QHTCPTCRAPI 333

[Close]

BLAST of Spg024659 vs. ExPASy TrEMBL
Match: A0A6J1H0A8 (E3 ubiquitin protein ligase RIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111459248 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 1.3e-177
Identity = 323/391 (82.61%), Postives = 342/391 (87.47%), Query Frame = 0


Query: 113 LSFILGLSVCLLDMESVLQSFWGCFDLVFGLRGIVESLEEWRNPRLSYERQLDLIRSLWE 172
           L F   LS+    ++++L   +   D+      +  S E   N ++S    + +  SLWE
Sbjct: 194 LLFFEPLSIAFETLQAILVHGFQLLDI-----WLHHSAENCSNCQISKFFNMTIAGSLWE 253

Query: 173 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRIRG 232
           LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFL+IRALLSAIIKRIR 
Sbjct: 254 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLHIRALLSAIIKRIRV 313

Query: 233 FMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 292
           FMKLMKALGAL AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ
Sbjct: 314 FMKLMKALGALHAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 373

Query: 293 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPAGIF 352
           GLNEYYSCPTCRKPLFVGRQENDVNPHAGETF+DEQLA QISAG+NRQN+ +PTLPAGIF
Sbjct: 374 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFNDEQLARQISAGINRQNSAIPTLPAGIF 433

Query: 353 PNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLASVGE 412
           PNQTQN VEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARS GLGRVQMMMRHLASVGE
Sbjct: 434 PNQTQNTVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSAGLGRVQMMMRHLASVGE 493

Query: 413 TYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNLANI 472
           TYAQTSIE+SAWGLWPLNPSQVVAGGSQVPRSVVGRHP GS GGLNMNV RASNDNLANI
Sbjct: 494 TYAQTSIEESAWGLWPLNPSQVVAGGSQVPRSVVGRHP-GSTGGLNMNVPRASNDNLANI 553

Query: 473 LAMAETVREVLPHVPDELIFQALTDRESLEV 504
           LAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 554 LAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. ExPASy TrEMBL
Match: A0A6J1K4H8 (E3 ubiquitin protein ligase RIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111491111 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 2.4e-176
Identity = 320/391 (81.84%), Postives = 342/391 (87.47%), Query Frame = 0


Query: 113 LSFILGLSVCLLDMESVLQSFWGCFDLVFGLRGIVESLEEWRNPRLSYERQLDLIRSLWE 172
           L F   LS+    ++++L   +   D+      +  S E   N ++S    + +  SLWE
Sbjct: 194 LLFFEPLSIAFETLQAILVHGFQLLDI-----WLHHSAENCSNCQISKFFNMTIAGSLWE 253

Query: 173 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKRIRG 232
           LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFL+IRALLSAIIKRIR 
Sbjct: 254 LKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLHIRALLSAIIKRIRV 313

Query: 233 FMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 292
           FMKLMKALGAL AALP+ATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ
Sbjct: 314 FMKLMKALGALHAALPNATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSWLDQ 373

Query: 293 GLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPAGIF 352
           GLNEYYSCPTCRKPLFVGRQENDVNPHAG+TF+DEQLA QISAG+NRQNA +PTLPAGIF
Sbjct: 374 GLNEYYSCPTCRKPLFVGRQENDVNPHAGDTFNDEQLARQISAGINRQNAAIPTLPAGIF 433

Query: 353 PNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLASVGE 412
           PNQTQN VEGSPWRSTSLDPSWLHDWASQSVDGAGPSNA+RS GLGRVQMMMRHLASVGE
Sbjct: 434 PNQTQNTVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNASRSAGLGRVQMMMRHLASVGE 493

Query: 413 TYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNLANI 472
           TYAQTSIE+SAWGLWPLNPSQVVAGGSQVPRSVVGRHP G+ GGLNMNV RASNDNLANI
Sbjct: 494 TYAQTSIEESAWGLWPLNPSQVVAGGSQVPRSVVGRHP-GNTGGLNMNVPRASNDNLANI 553

Query: 473 LAMAETVREVLPHVPDELIFQALTDRESLEV 504
           LAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 554 LAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. ExPASy TrEMBL
Match: A0A1S3BMI6 (E3 ubiquitin protein ligase RIN2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491275 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 3.2e-176
Identity = 311/334 (93.11%), Postives = 321/334 (96.11%), Query Frame = 0


Query: 170 LWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKR 229
           LWELKG+LIRNLGFFLDMATLLMALGHYV+IWRLHGMTFNLVDAVLFLNIRALLSAI+KR
Sbjct: 246 LWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLSAIVKR 305

Query: 230 IRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 289
           IRGFMKL KALGAL+AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW
Sbjct: 306 IRGFMKLRKALGALNAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 365

Query: 290 LDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPA 349
           LDQGLNEYYSCPTCRKPLFVGRQENDVNP AGETFSDEQLA QISAGLNRQNAT+PTLP 
Sbjct: 366 LDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATIPTLPT 425

Query: 350 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLAS 409
           GIFPNQTQNPVEGSPWRSTSLDPSWLHDW SQS+DGAGPSNAARSVGLGRVQMMMRHLAS
Sbjct: 426 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWTSQSMDGAGPSNAARSVGLGRVQMMMRHLAS 485

Query: 410 VGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNL 469
           VGETYAQTSIEDSAW LWPLNPSQVVAGGSQVPR+VVGRHP GS+GGLNMNVARASN+NL
Sbjct: 486 VGETYAQTSIEDSAWSLWPLNPSQVVAGGSQVPRNVVGRHP-GSMGGLNMNVARASNENL 545

Query: 470 ANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           ANILAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 546 ANILAMAETVREVLPHVPDELIFQDLQRTNSVTV 578

[Close]

BLAST of Spg024659 vs. ExPASy TrEMBL
Match: A0A1S3BMT7 (E3 ubiquitin protein ligase RIN2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491275 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 3.2e-176
Identity = 311/334 (93.11%), Postives = 321/334 (96.11%), Query Frame = 0


Query: 170 LWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKR 229
           LWELKG+LIRNLGFFLDMATLLMALGHYV+IWRLHGMTFNLVDAVLFLNIRALLSAI+KR
Sbjct: 234 LWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLSAIVKR 293

Query: 230 IRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 289
           IRGFMKL KALGAL+AALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW
Sbjct: 294 IRGFMKLRKALGALNAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 353

Query: 290 LDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPA 349
           LDQGLNEYYSCPTCRKPLFVGRQENDVNP AGETFSDEQLA QISAGLNRQNAT+PTLP 
Sbjct: 354 LDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATIPTLPT 413

Query: 350 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLAS 409
           GIFPNQTQNPVEGSPWRSTSLDPSWLHDW SQS+DGAGPSNAARSVGLGRVQMMMRHLAS
Sbjct: 414 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWTSQSMDGAGPSNAARSVGLGRVQMMMRHLAS 473

Query: 410 VGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNL 469
           VGETYAQTSIEDSAW LWPLNPSQVVAGGSQVPR+VVGRHP GS+GGLNMNVARASN+NL
Sbjct: 474 VGETYAQTSIEDSAWSLWPLNPSQVVAGGSQVPRNVVGRHP-GSMGGLNMNVARASNENL 533

Query: 470 ANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           ANILAMAETVREVLPHVPDELIFQ L    S+ V
Sbjct: 534 ANILAMAETVREVLPHVPDELIFQDLQRTNSVTV 566

[Close]

BLAST of Spg024659 vs. ExPASy TrEMBL
Match: A0A0A0KG75 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408180 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 6.0e-175
Identity = 309/334 (92.51%), Postives = 321/334 (96.11%), Query Frame = 0


Query: 170 LWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIKR 229
           LWELKG+LIRNLGFFLDMATLLMALGHYV+IWRLHGMTFNLVDAVLFLNIRALLSAI+KR
Sbjct: 246 LWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLSAIVKR 305

Query: 230 IRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 289
           IRGFMKL KALGAL+AALPDAT EELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW
Sbjct: 306 IRGFMKLRKALGALNAALPDATSEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRSW 365

Query: 290 LDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLPA 349
           LDQGLNEYYSCPTCRKPLFVGRQENDVNP AGETFSDEQLA QISAGLNRQNAT+PTLPA
Sbjct: 366 LDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATIPTLPA 425

Query: 350 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLAS 409
           GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQS+DGAGPSNAARSVGL RVQMMMRHLAS
Sbjct: 426 GIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSMDGAGPSNAARSVGLSRVQMMMRHLAS 485

Query: 410 VGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDNL 469
           VGETYAQTSIEDSAW LWPLN SQVVAGGSQVPR+VVGRHP GS+GGLNMNV+RASNDNL
Sbjct: 486 VGETYAQTSIEDSAWSLWPLNSSQVVAGGSQVPRNVVGRHP-GSMGGLNMNVSRASNDNL 545

Query: 470 ANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           ANI+AMAETVREVLPHVPDELIFQ L   E ++V
Sbjct: 546 ANIIAMAETVREVLPHVPDELIFQGLQFGERIQV 578

[Close]

BLAST of Spg024659 vs. TAIR 10
Match: AT4G25230.1 (RPM1 interacting protein 2 )

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-122
Identity = 225/336 (66.96%), Postives = 261/336 (77.68%), Query Frame = 0


Query: 169 SLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIK 228
           SL E KG L RNLGFFLDMATL+MALGHY+HIW LHG+ F+LVDAVLFLNIRALLSAI+K
Sbjct: 244 SLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLSAILK 303

Query: 229 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 288
           RI+G++KL  ALGAL AALPDAT EEL+AYDDECAICREPMAKAK+L+CNHLFHL CLRS
Sbjct: 304 RIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRS 363

Query: 289 WLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLP 348
           WLDQGLNE YSCPTCRKPLFVGR EN+VNP   E  SDEQLA Q    L RQN  +  L 
Sbjct: 364 WLDQGLNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQ----LERQNNPVHALA 423

Query: 349 AGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLA 408
            G+FP +  + VE    R+  LDPSWL  W+SQ  D AGPS  +R+VGLGRVQMMMRHLA
Sbjct: 424 TGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRVQMMMRHLA 483

Query: 409 SVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNM-NVARASND 468
           SVGE+YAQT+++D+AW LWP+NPSQ     + VP    GR      GGL++  V+  +N+
Sbjct: 484 SVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNGGR-----TGGLHLRTVSNTTNE 543

Query: 469 NLANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           +L NILAMAETVREV+PHVPDE+IFQ L    S+ V
Sbjct: 544 SLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAV 570

[Close]

BLAST of Spg024659 vs. TAIR 10
Match: AT4G25230.2 (RPM1 interacting protein 2 )

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-122
Identity = 225/336 (66.96%), Postives = 261/336 (77.68%), Query Frame = 0


Query: 169 SLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIK 228
           SL E KG L RNLGFFLDMATL+MALGHY+HIW LHG+ F+LVDAVLFLNIRALLSAI+K
Sbjct: 244 SLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLSAILK 303

Query: 229 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 288
           RI+G++KL  ALGAL AALPDAT EEL+AYDDECAICREPMAKAK+L+CNHLFHL CLRS
Sbjct: 304 RIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRS 363

Query: 289 WLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLP 348
           WLDQGLNE YSCPTCRKPLFVGR EN+VNP   E  SDEQLA Q    L RQN  +  L 
Sbjct: 364 WLDQGLNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQ----LERQNNPVHALA 423

Query: 349 AGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLA 408
            G+FP +  + VE    R+  LDPSWL  W+SQ  D AGPS  +R+VGLGRVQMMMRHLA
Sbjct: 424 TGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRVQMMMRHLA 483

Query: 409 SVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNM-NVARASND 468
           SVGE+YAQT+++D+AW LWP+NPSQ     + VP    GR      GGL++  V+  +N+
Sbjct: 484 SVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNGGR-----TGGLHLRTVSNTTNE 543

Query: 469 NLANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           +L NILAMAETVREV+PHVPDE+IFQ L    S+ V
Sbjct: 544 SLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAV 570

[Close]

BLAST of Spg024659 vs. TAIR 10
Match: AT5G51450.1 (RPM1 interacting protein 3 )

HSP 1 Score: 430.3 bits (1105), Expect = 2.4e-120
Identity = 217/335 (64.78%), Postives = 256/335 (76.42%), Query Frame = 0


Query: 169 SLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIK 228
           SL E KG L RNLGFFLDMATL+MALGHY+HIW LHGM F+LVDAVLFLNIRALLS+I+K
Sbjct: 244 SLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILK 303

Query: 229 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 288
           RI+G++KL  ALGAL AAL DAT EEL+ YDDECAICREPMAKAK+L+CNHLFHL CLRS
Sbjct: 304 RIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRS 363

Query: 289 WLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLP 348
           WLDQGLNE YSCPTCRKPLFVGR E++ NP  GE  SDE LA Q      RQN ++  L 
Sbjct: 364 WLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQ----FERQNNSVHALT 423

Query: 349 AGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSVDGAGPSNAARSVGLGRVQMMMRHLA 408
            G+FP +T N  E  PWR++ +DPSWL  W+ Q VD  G S  +RSVGLG+VQ+MMRHLA
Sbjct: 424 TGMFPTETPNFTESDPWRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLA 483

Query: 409 SVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHPAGSIGGLNMNVARASNDN 468
           SVGE  AQT+++D++WGLWP+NPSQ     + VP    GR      GGL++     + +N
Sbjct: 484 SVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGR-----TGGLHLRTVSRAANN 543

Query: 469 LANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
           +A+ILAMAETVREVLPHVPDE+IFQ L    S+ V
Sbjct: 544 MASILAMAETVREVLPHVPDEIIFQDLQRTNSVSV 569

[Close]

BLAST of Spg024659 vs. TAIR 10
Match: AT5G51450.2 (RPM1 interacting protein 3 )

HSP 1 Score: 419.1 bits (1076), Expect = 5.6e-117
Identity = 217/353 (61.47%), Postives = 256/353 (72.52%), Query Frame = 0


Query: 169 SLWELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAVLFLNIRALLSAIIK 228
           SL E KG L RNLGFFLDMATL+MALGHY+HIW LHGM F+LVDAVLFLNIRALLS+I+K
Sbjct: 244 SLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSSILK 303

Query: 229 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 288
           RI+G++KL  ALGAL AAL DAT EEL+ YDDECAICREPMAKAK+L+CNHLFHL CLRS
Sbjct: 304 RIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGCLRS 363

Query: 289 WLDQGLNEYYSCPTCRKPLFVGRQENDVNPHAGETFSDEQLAHQISAGLNRQNATMPTLP 348
           WLDQGLNE YSCPTCRKPLFVGR E++ NP  GE  SDE LA Q      RQN ++  L 
Sbjct: 364 WLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQ----FERQNNSVHALT 423

Query: 349 AGIFPNQTQNPVEGSPW------------------RSTSLDPSWLHDWASQSVDGAGPSN 408
            G+FP +T N  E  PW                  R++ +DPSWL  W+ Q VD  G S 
Sbjct: 424 TGMFPTETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGVDVVGSSA 483

Query: 409 AARSVGLGRVQMMMRHLASVGETYAQTSIEDSAWGLWPLNPSQVVAGGSQVPRSVVGRHP 468
            +RSVGLG+VQ+MMRHLASVGE  AQT+++D++WGLWP+NPSQ     + VP    GR  
Sbjct: 484 GSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGR-- 543

Query: 469 AGSIGGLNMNVARASNDNLANILAMAETVREVLPHVPDELIFQALTDRESLEV 504
               GGL++     + +N+A+ILAMAETVREVLPHVPDE+IFQ L    S+ V
Sbjct: 544 ---TGGLHLRTVSRAANNMASILAMAETVREVLPHVPDEIIFQDLQRTNSVSV 587

[Close]

BLAST of Spg024659 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 9.5e-16
Identity = 50/136 (36.76%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 171 WELKGSLIRNLGFFLDMATLLMALGHYVHIWRLHGMTFNLVDAV--LFLNIRALLSAIIK 230
           WE K      L    D+  L M L  ++ I+  +G+  +L+  +   F N +        
Sbjct: 206 WEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYGLPLHLIRELYETFRNFKI------- 265

Query: 231 RIRGFMKLMKALGALDAALPDATPEELQAYDDECAICREPMAKAKKLNCNHLFHLACLRS 290
           R+  +++  K    ++   PDATPEEL + D  C ICRE M  AKKL C HLFH+ CLRS
Sbjct: 266 RVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRS 325

Query: 291 WLDQGLNEYYSCPTCR 305
           WL++      +CPTCR
Sbjct: 326 WLER----QNTCPTCR 330

The following BLAST results are available for this feature:

BLAST of Spg024659 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957821.1	2.7e-177	82.61	E3 ubiquitin protein ligase RIN2-like [Cucurbita moschata] >XP_022957822.1 E3 ub...	[more]
XP_023533476.1	2.7e-177	82.61	E3 ubiquitin protein ligase RIN2-like [Cucurbita pepo subsp. pepo] >XP_023533477...	[more]
XP_022995635.1	5.0e-176	81.84	E3 ubiquitin protein ligase RIN2-like [Cucurbita maxima] >XP_022995636.1 E3 ubiq...	[more]
XP_008449376.1	6.5e-176	93.11	PREDICTED: E3 ubiquitin protein ligase RIN2-like isoform X1 [Cucumis melo]	[more]
XP_008449377.1	6.5e-176	93.11	PREDICTED: E3 ubiquitin protein ligase RIN2-like isoform X2 [Cucumis melo]	[more]

BLAST of Spg024659 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYC8	2.1e-121	66.96	E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana OX=3702 GN=RIN2 PE=1 SV...	[more]
Q8W4Q5	3.4e-119	64.78	E3 ubiquitin protein ligase RIN3 OS=Arabidopsis thaliana OX=3702 GN=RIN3 PE=1 SV...	[more]
Q9R049	1.2e-23	34.50	E3 ubiquitin-protein ligase AMFR OS=Mus musculus OX=10090 GN=Amfr PE=1 SV=2	[more]
Q9UKV5	2.7e-23	33.92	E3 ubiquitin-protein ligase AMFR OS=Homo sapiens OX=9606 GN=AMFR PE=1 SV=2	[more]
Q5Z880	9.3e-16	35.42	ERAD-associated E3 ubiquitin-protein ligase HRD1 OS=Oryza sativa subsp. japonica...	[more]

BLAST of Spg024659 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H0A8	1.3e-177	82.61	E3 ubiquitin protein ligase RIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111459...	[more]
A0A6J1K4H8	2.4e-176	81.84	E3 ubiquitin protein ligase RIN2-like OS=Cucurbita maxima OX=3661 GN=LOC11149111...	[more]
A0A1S3BMI6	3.2e-176	93.11	E3 ubiquitin protein ligase RIN2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3BMT7	3.2e-176	93.11	E3 ubiquitin protein ligase RIN2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0KG75	6.0e-175	92.51	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408180 P...	[more]

BLAST of Spg024659 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25230.1	1.5e-122	66.96	RPM1 interacting protein 2	[more]
AT4G25230.2	1.5e-122	66.96	RPM1 interacting protein 2	[more]
AT5G51450.1	2.4e-120	64.78	RPM1 interacting protein 3	[more]
AT5G51450.2	5.6e-117	61.47	RPM1 interacting protein 3	[more]
AT1G65040.2	9.5e-16	36.76	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 262..303 e-value: 2.3E-7 score: 40.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 260..304 e-value: 1.0E-8 score: 35.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 262..304 score: 12.681067
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 235..314 e-value: 2.2E-19 score: 70.6
None	No IPR available	PANTHER	PTHR22765:SF277	E3 UBIQUITIN PROTEIN LIGASE RIN3	coord: 173..503
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 173..503
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 246..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024659.1	Spg024659.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034052	positive regulation of plant-type hypersensitive response
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0061630	ubiquitin protein ligase activity