Spg024645 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACGTTTGGAATTACCTCTCGGAAAACTCCATTCGGCTGGAATGCAGTTGAAGTTGTTCTTGTATGTTGTGGATGCCGCACACCAAACCACCTTGGCACGCTTCCTGAGTCATCTGAATCGTCGCCAAGTTTGGTGTGTCCATTATTCCATTGTGTAAACCCGAGACTTCTCTAGGATCATTTTCTCTTGTCATCTATTGTGGAAGTTGAACTAAAAGGTTTTGTTATTCATTGTCTAGGAAAAATGGCAATGTTTTGTGGTTCTTTATGGTTCATTGTTAGTTGAAGTTGTTGGGATTTTCTAATTTAAAAGAAGAAAGAAAAGAATGGAAATAAAGATGAAAAGAAAATAAAAGGAAAGGAAAAGGAAAAGGAAAAGCAAAGATAAAAAAAAAAAAAAAAAGGAAAGAAAGAAAATGGGAAGGGACAGTAAAGACTCCACCACCGACAGGCTCATTTTTCAGCTCATGTTCAACTCATTTTTCATCATTATCCATCCAAATTTTCAGAGCACTTGAGGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTCGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTGATTCGGTTTGAGCTGCACAGAAGGAAATAACAGGTGAGGTTTGCTTTTCTTGAACGTTAGTTCATTTTCTAGCAAATTTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGAAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCTTACAACTTTCATGCAGATTTAGTGAGCCAAAAATGACTTTAAGTAGGTTTAATTTCAGGAGATAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTTGGGGCAATTCTGGACAAATCTGTTGGGAATCTCGTTTTCTTTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTGGATGTGTATTTCATTAATTATGGTTAAGTATTGAGGAAGTTGTGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAATCTGGAAAAGTAGAATGTGAATGTGGTTCTTAATTCAAGTGTCTAAAATTTATGAGCATGGAAAGACAAAGCTATCTGTGGTTCTAATGCTCGGTTTTGGTTGTTTGACAGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAAGAAACTAGCTAAGACTGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGACGTTTTATATGCTTTACCATCAATGATATATGATTTTTATGAACGGTTTCAAGCATAAGTTTTGAGCTCAGATTTTCTAACAAGGTTTATATACGAGCACGTGGCTCATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTCCTGAGATTTCTAATGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCACTACATCGTAGGACTAGTAAACGTTTGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACATAATATGCCTTGCTAGATTTTTAATGACGAACTTGTGAGATGTTTTGGAAACCCTTTATTATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACTGAAAGCTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTAA ACGTTTGGAATTACCTCTCGGAAAACTCCATTCGGCTGGAATGCAGTTGAAGTTGTTCTTGTATGTTGTGGATGCCGCACACCAAACCACCTTGGCACGCTTCCTGAGTCATCTGAATCGTCGCCAAAGCACAGGATTTTCGAGCAAAGCAGAAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTGGATGTGCCAAGAGGAAATAGGTCGGGTCTACAAACCAAGAAACTAGCTAAGACTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCACTACATCGTAGGACTAGTAAACGTTTGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACTGAAAGCTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTAA ACGTTTGGAATTACCTCTCGGAAAACTCCATTCGGCTGGAATGCAGTTGAAGTTGTTCTTGTATGTTGTGGATGCCGCACACCAAACCACCTTGGCACGCTTCCTGAGTCATCTGAATCGTCGCCAAAGCACAGGATTTTCGAGCAAAGCAGAAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTGGATGTGCCAAGAGGAAATAGGTCGGGTCTACAAACCAAGAAACTAGCTAAGACTCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCACTACATCGTAGGACTAGTAAACGTTTGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACTGAAAGCTCCAGATCAAGCTCCAATACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTAA TFGITSRKTPFGWNAVEVVLVCCGCRTPNHLGTLPESSESSPKHRIFEQSRRISDFLWFFEHSGVYKLNQKLYLVSCRVFENEELDVPRGNRSGLQTKKLAKTPEAIWYRVHTGYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPLHRRTSKRLLYWACPTQRRSVMLVEIELPVPDTLPTSTESSRSSSNTWVELYIESVYYVNVL Homology
BLAST of Spg024645 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-25 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Spg024645 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-25 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Spg024645 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 119.8 bits (299), Expect = 2.9e-23 Identity = 87/176 (49.43%), Postives = 94/176 (53.41%), Query Frame = 0
BLAST of Spg024645 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 119.8 bits (299), Expect = 2.9e-23 Identity = 87/176 (49.43%), Postives = 94/176 (53.41%), Query Frame = 0
BLAST of Spg024645 vs. NCBI nr
Match: KAA0053207.1 (hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa] >TYK00136.1 hypothetical protein E5676_scaffold2510G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 4.9e-15 Identity = 67/169 (39.64%), Postives = 76/169 (44.97%), Query Frame = 0
BLAST of Spg024645 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 8.7e-26 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Spg024645 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 8.7e-26 Identity = 73/136 (53.68%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Spg024645 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.4e-23 Identity = 87/176 (49.43%), Postives = 94/176 (53.41%), Query Frame = 0
BLAST of Spg024645 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.4e-23 Identity = 87/176 (49.43%), Postives = 94/176 (53.41%), Query Frame = 0
BLAST of Spg024645 vs. ExPASy TrEMBL
Match: A0A5A7UFD2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00220 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.4e-15 Identity = 67/169 (39.64%), Postives = 76/169 (44.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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