Spg024633 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024633
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold12: 17757666 .. 17769694 (-)
RNA-Seq Expression	Spg024633
Synteny	Spg024633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCCGAATCTGGGTTCTACGTTCATGAATGAAGGGGCTGTCTCCGAGCAAAATCAGGTTGAGGCGAAGGCAGGACGGGTTTATTCTCAGTCTTTGGCGGTGGTTGAGACTTTTTATCCGTTTGTCGTGGGTATGCAGCAGCCTAGCCCATCTGCTGAGGACCCTTCTTACTCGATGGTCGAGGTTAGCCCTGTTGGAATGCCAAACTAGGTACGCGCCTTTTCTTCGAAGTCTTTACCTTCCGCTTTGGGTTTTGGGGAGATGAGAGGTATGCATGTTCAGAGCATGATGCCAAATTTCCCCTATGCATCGTTTGGCGCTCTTCCGAGAATGGGGGAGGGGAATCAAGTTGGGAATCCTTTTTCTTCTTGCTATCCAGTTTTTGTCAATCCTAGCGTTTTTCCTGGAGGTCCCTTTCCTCACCCTATGGCTTTCATGTCGGGAGAGTTTGGTCCGTCTTTAATTACGAGTCCTAATGCTTATAGAATCGGACTCGAAGGGAATGACCATCCTTGTGCAATGGGGCTAGTTATAGAGGATTCTGATTGTAAATCTCATTCCTCAAGTCATGTAAGGGTTCCATTTCAGGGGAGTGTTATAGGTCAATGGACCTCGGGATGGGCGGCGTTAGCTTCGGTTGGCATTCAGGCGACCCCGACAAAGGGAGGGCCTTTGAAATCCATCGATCCCCCAGATGCCCCAATGAAAGGAAATCAATTTCGTCAAAGGAAAGGGAAAGGGGGAACCAATAAGACAAATAGGGAACTTAAGAAATTGACGAACTCAGTTAATTTTTTTTGAAAAGGAAACCACACTTTCATTGAAGCAATGAAAAGAGACTAATGCTCAAAATACAATGAAACAAAATAAAAGGAAAAAAATGGCAAAAAAAATAGATGAATAACAATTAAGTCAAAAACATAAAAAGAGAAGCCTGAAAAAACTTGGACAGCAAACTCCAAGACGAAGCTTTGAACCAAGCAAAGAATCCCAGCGCAAAACGTCTTTCAAGACCGATCTATCACTGACCCTGCAAATTGCTGCCAACTGATGCAGAAATGAAGCACACTAATGAACCCGAGACATTGCTGAAACACCAAGCAAAGCATATAGAATGATTGATACAGACCCTCACCGCTTTAAGCAACCTAGCGCACCCAATTTCCTTCCCTAAGACTTGATTAAGAAAGGTATGACATTGTTGCTAATGCTGCCCCACGACGCAAAGCCGAGCAACAAATAACAGCCTTCTGGAATGAAACCTCCAAAAGAGAACTAGATGCAGCTAATATTTCCAATCTCCATGTGATCACACCTTAGAAGTTTTCTCCAACATTAGCCAGAAAACTAAACAAGCCCCTCACAGCAGAGGTTAAGATAGAGATAGTGCATTATCTTCATCAACTAGTTTCTCAATTGCTTCATAGCTTGATGAAAACAGACTAGCCAACAAGATGCTTTTTAGTTCTTTATAAGAACCGAACCAAAGATCAAACTTACAACACTAAATACTTCTTCCTCAACCTCCAATGGCAAATGCAACTACTCCAAACTCACTCCGAACCAAAACAAAATTTCCAAAATTGGCAGTTCAAAAATTAAAGCAGTAGCATCTTCACAAATTTTACAGAGGGCAAAGGCACTAGCATGAGAAGGGACAGATTCTGAGATCCCAGAAGCAAGAAATAATCTTTAGATTACCTTCCCACAAGACAATCTTCATAACTGATGAAAAGAAATCAAGCTAAGACTTTAGACGATTGAGGCGAGATCTTACACAATTGAAGACCACAAGTTTCAACTAATAAAGAGAATTGGTTAGGAATTTGAGAAGGAGACAGTAAGGGATCATGAACTATTGAACTTTGATTGCCGCCTAACCCATCATCATCACCTGGAAAAAAAGCCAAAGACTCACCAATTTGGTCTTCTGAAAAGGGCTCCGAACAATCTTCTTCAGCATGCAAAGACTCAGAATCCTCACTGCTCACACTAACCGAAGACTCATCATCTGAATCCAAGGAAGAGTGAGCTTTAGGGCTTGTTAGAGTTATTATATTAGTATAATAAGTGTAATTGTATAGAGTTGTCCTTTATTGTCTTTTTACATTCTCCTACTTAGGGTTAACCTTGTACACTTGTATATATATATATCTTTATGTGAATGGAATAGATGATTGAGATTCTCTCAAACCTTAGAGTTTACATGGTATCAGAGCGTTAGGGCAATTAGGGTTTTGTCTCATTGGAGATTTGTTAACGGTTAGGGTTTTGTCTCGTTGGAAATTTGTGAACGGTTAGGGTTTTGGTTTGGAACACCTTTTGAGAGTTTTGGGTTGCCCAAAACGTTTGCTGCTTGAAACCGCCGCCGCCACCACCAGATTCCGCCGCCGCCGCCGCCTGAAACCGCCGCCGTTTTGGTCTGTCACCGGAGGATTTTTTTGTCACCGCCCAGCTCAAAACGTAGCCCACTCGCCGATCTATTGATCCTCAAAATCCGAAGCCGAAAATCCCAGCGCGTGGCCCTCACGCGCCGCCACTAGCTTCTGCGACAGCCTCACGCGCCGACGCGTGTGAGCGCGTGCGCCGCCGTTTTTCTGCTCCTTTTTAGTGGGTCGGCTCGTTTTGGTCTTCTCCTTCCAGTCGTGTGTTGCTTTGGGCCATATCGGGTTTGTTTGGTTATATTTGAAAGCCATAGTTTGTTTGGAGGTTTAGGGTTTGTGTGATTCAGATTTCAGCTCTATTTTTTGGTCTGTTTTTGTTGAGGTTATGGCTGAAAAGAAGGCTTTAGTGCTGTCCGAGATGATTCCAATGGTATCCAAGATCACGGAACATAAGTTGAATGGTTCTAATTTTTATGCTTGGTGGTCGAATATTCACCATTATATTCGTAGTCTTGATATGGATGACCACCTGACTTTAGAATCCCCGCCAAACAATGATACTAAGAAGAGTTGGCTACGGGACGAGTCTCGACTTATTCTACAAATCAAGAATTCTATTGAAAGTGACATCATTGGGCTCGTTAATCACTGTAATTCTGTCAAGGAGCTCTTGGAATATTTAGATTTTCTTTACTCTGGGAAAGGAAACATCAGTCGGATATTTGATGTATGTAGAACCCTCTTTCAACCTGATCAAGGCGAGAAGTCTTTGTTGAATTATTTTATGGAATGCAAAAGAGCATATGCAGAATTTAATGAAGTGTTGCCCATGAGTACTGATATCAAGGTTCAGAATGTCCAACGCGAACAACTGTTTATCATGAGTTTTCTAGTTGGTCTTGCTTCAAAATATGACACAGCTAAAGATCAAGTTCTCTCGAGTTCAGACATCTCATCATTGGAAGATGCCTACACTCGGATACTACGTACAGAGCGGTCGCCAGTGATAGTGTCATCTGAATCTAACAGTGCTTTAGTTGGACAGACCACTGAATATAGAGGCAATCGAGGGGTAGCATCGAACATGTCCAGAGGAAATTCTACTGCTCCAAAAGCAAATTCAGGAGATATTGTTTGCCGCTATTGTCATAAGCCAGGGCATATAAAACGTGATTGTCGGAGATTGCTTTATAGAAACCAGAGGTTTCCATCTGCACATGTTGCCTCTACTCCTGATAATTCTGACAAGTCTGTTTCGATCTCAGCTGAGGAGTTTGCTAAATTCCGACTGTATCAAGAGTCACTGATGGCTTCATCCTCCACTCCTGTTACTGCCATTGCCGACACAGGTAACACATCTACATGTCTTCTTTCCTCCTCTGCGAAATGGGTCATAGACTCTGGCGCTTCCGATCACATGACAGGTAATCCCCGTTTATTCTCTACCATTGATCCATCTACATCTTCCCCTAGTGTCACTATAGCTGATGGAACCACCTCTCCAGTCTTAGGAATCGGCAATGTTCGACTTACCAACTCACTTTCGTTGTCTTCCGTTTTGAGTTTACCACAGTTTTCCTTTAACTTGATTTCTGTTAGTAAGCTCACTCGTGACCTTAATTGTTGTGTCTCATTTTTTCCTGGTTATTGCTTATTTCAGGATCTTACGACGAAGAGGACTATTGGTAAAGGGCGTGAATCTAGAGGTCTCTACATCTTTGAACCAGAAATATCAACAGCCGTTGCATGTTCTAAAGTGTCATCTCCATTTGAAGATCATTGTCGTTTGGGTCATCCTTCTATTTCCGTATTGAAGAATCTTCGTCCTCAGTTTCATTCTTTGTCTTCTTTAACTTGTGAGTCATGTCAGTTTGCTAAGTTCCATCGTGTGAGTCTGTATCCCCGTGCAACTAAACGAGCTAATGCTCCATTTGAATTAGTTCATTCTGATGTTTGGGGTCCGTGTCCTATTGAGTCAAAGATAGGGTTTAGATATTTTGTTACCTTTGTCGATGATTTTTCTCGTGTAACTTGGTTATATTTAATGAAAAATCGCTCTGAGCTGCTTTCTCATTTCCGTAACTTCCATGCTGAAATCCGAACTCAATTTAACGGTTCTCTTAAAGTTCTACGGAGTGATAATGCTAAAGAATACTTCTCTCATGCTCTTAATTCTTATTTAGATGAACATGGCATCCTCCATCAATCCTCATGTGTTGATACTCCATCTCAAAATGGGGTTGCAGAAAGAAAGAATCGTCATCTCCTCGAAACAGCCAGAGCCTTAATGTTCCAGATGCATGTTCCAAAGTATTTTTGGGCCGATGCTGTATCCACAGCTTGTTTCTTAATAAATCGCATGCCCTCCTCAGTTCTAAAGGGTGAGATACCTTATCGTATTTTATGTCCCACACAACCTTCATTCTCTCTTCCTCCCAAAATCTTTGGTTGTATTTGCTTTGTTCGGGATGTTCGTCCTCATCTCACCAAACTTGATCCCAAGTCCTTAAAATGTATCTTCCTTGGTTATTCTCGTGTTCAAAAAGGGTATCGATGTTATTGTCCTAGTCTCGATCGTTATTTTGTCTCTCCTGATGTCACCTTCTTTGAAGATTCTTCTTTCTTTTCCTCACCTTCCAATCAGTCTAAGGGGGAGCGTAATGAGGAGGATGATGATTTTCTTGTCTATACCATTCTCTCCTCTTGTGAGCCTTCTACTGATTCACCTCCATCTATGCCTGTTTCTACTCGTCCACCTATTACTCAGGTTTATTCTCGACGACCACCCCCTTCAGTTACATGCCCTGAACCAGAGGCTTCTTCGTCATTGGATCCAGGAACGAGCGATGACCTTCCCATTGCTCTTCGTAAAGGTAAACGTCAATGCACTTATCCTATTTCCAATTTTGTTTCATATAATCATTTGTCATCTTCTTCCTGTTCTTTTATTGCATCCTTACAATCGGTATCTGTTCCTAAGACTGTTCATGAAGCTTTGTCTCATCCTGGTTGGTGTGCTGCAATGGTTGAGGAGATGAATGCCTTAGATGACAATTGTACTTGGGATTTAGTTTCTCTTCCTGCAGGAAAGAAGCCTATTGGTTGTAAGTGGGTATTTGCGGTCAAGGTCAATCCAGATGGATCTGTGGCTCGCTTGAAAGCTCGCCTTGTTGCTAAGGGTTATGCACAAACCTATGGAGTTGACTATTCTGATACCTTTTCTCCCGTTGCTAAATTGGCTTCTGTTCGGCTGTTCATTTCGTTGGCATCCATTCATCATTGGCCCCTGCATCAGCTTGATATTAAAAATGCCTTTCTTCATGGTGATCTTGAAGAAGAGGTGTATATGGAGCAACCACCAGGGTTTGTTGCTCAGGGGGAGAATGGAAAGGTATGTCGTCTTCTTAAATCCTTGTATGGATTAAAACAGAGTCCCCGAGCTTGGTTTGGAAAATTCAGTCAGGTGATTGTAAATTTTGGAATGAGGAAAAGTAAATCAGATCATTCTGTTTTTTATAAGCGATCTGCAAATGGTGTTATCTTGTTGGTTGTGTATGTTGATGATATTGTTATTACTGGCGATGACACATCAGGTATCCAAGCACTCAAAACCTTTCTCCATAGTCAATTCCATACAAAAGATTTAGGAGCGTTGAAATACTTTCTGGGAATTGAGGTAGTAAGGAGCAAGAAGGGAATCCTGTTATCACAGCGAAAATATGTAATTGACTTGTTGACTGAAACAGGGAAGTTAGGGGTTAAACCATGTAGTACCCCAATGATGCCGAACTTACAGCTTACGAAAGAGGGAGAGTTACTTAAAGATCCTGAAAGGTATAGAAGGTTAGTAGGAAAACTCAATTATCTTACGGTGACTCGGCCTGACATAGCTTATTCAGTGAGTATTGTGAGCCAGTTTATGTCTTCTCCTACAGTTGATCATTGGGCTGCATTGGAACACATTTTGTGTTATTTGAAGGCAGCTCCTGGACGTGGTTTATTATATAAGGATTATGGACACATGAACATTGAATGCTTCTCAGATGCGGATTGGGCAGGATCTAGAGAAGATAGAAGATCAACTACAGGATACTGTGTATTTGTGGGTGGTAATTTGGTTTCTTGGAAAAGTAAGAAACAAAATGTGGTGTCACGTTCAAGTGCTGAATCAGAATATAGAGCAATGGCACAGTCTGTATGTGAATTAGTCTGGATACGTCAACTTCTTGTTGAATTGGGATTTGATATCACAACACCGACAAAATTGTGGTGTGATAATCAGGCCGCTCTTCATATTGCATCTAATCCTGTATTTCATGAACGGACTAAACACATTGAGGTTGACTGTCACTTTGTACGTGAAAAGATACAAGAAGGTTTGGTGTCAACAGGATATGTGAAGACTGGAGAGCAATTAGGAGATATCTTCACAAAGGCACTAAATGGAGCTCGAATAGATTATCTCTCTAACAAGTTGGGCATGACGAATATATATGCTCCAACTTGAGGGGGAGTGTTAGAGTTATTATATTAGTATAATAAGTGTAATTGTATAGAGTTGTCCTTTATTGTCTTTTTACATTCTCCTACTTAGGGTTAACCTTGTACACTTGTATATATATATATCTTTATGTGAATGGAATAGATGATTGAGATTCTCTCAAACCTTAGAGTTTACAGGGCTGAAAGAGCAAGCAATCCCTCTAACGAAATGATTTTTCACCCCAGGAATTTGAACAGATGATTCAATGAATTCCTTGGACTTTGAAAACCTAATTTCACCACTGACTTTTGAAGATTCCAAAACCTTGTTTGAAACAATCCTTTGAGTACATTCAGATTCCAAATGATCGGCATTAAAATTGGACTTCACAGCCAATGGCAGAGAAACCTTTTTCCAAGAATAAGTTTTTGCGCCCTTTTACAATGCTATCATCATCATTATTCTTGGAAGGAGAATCAAAAGTCTGTGGCTGCTAGACTTCCTTAGGGCTGGGACAAATAAAATCTTTAATAACTTTAGAGGGAGAGAAAATGAAATCCAACTCTTGATTGCTATCATTAAAGTCCATATAACCAACATTATTAATGTGCTTGACGAGCTCAGTTAATTATGATCGTAAGAAAGCCTCGAAGGAGGAAGGGGATCTAATGGTTATTAAATGAAGATGGTCTCCTGGAATGTGAGAGAGGGGGAGGGAGAAGAGGAATTTTGTGAAGGAGGTGTTGTCCCAAGAAAACCCGGACATTGTGGTCCTTCTTGAGACAAAGCGGCAGAAGTACTGTAGAAGCTTCGTGAAGAGCGTTTGGGGTAGGAGAAAAGCGAAGTGGGCTGGTATTGAGTCCCTTGGGGCGTCGTGGGGTATTCTTATTATGTGGGATGGGAGCCTGATTTCGATCAAGGAGGTAATCAAAGGAGCCTTCTCGATCTCTATTTCTTTTTCTCTCTCTGGAGCAGAGTCGAGGTTAAAATGTCGAGGTCTCAATTTAATGAAAATGTCAATGGAAATATCGACAAAATGTCGATGTCGATGGATATTCCTAGAAAAATACCCGAAACAAAAAAGTTCAAAAAAAATATTTAAATTAACAAATAAATGTTTCACACTTTTAAAATAAGTTTAAATACTTATGATAAATATTATCTCCACATTAGTTACATTTTGTTTACATTTAGTTTACATTTTATCAATTTTTTAGCCATATAATGGAAATATCGATTCACCCCGCATGCCGATGTCGAACCCATGGACATGTGGAAATGTCGATGGAAATGTCGACATGTCGATGGAAATTTAATACATTGGGCCCCCCCAGGTCTAAAGGTAGAAAGGAGTTTTGGAACGAGCTGGGTGACCTCTTTGGCCTTTGCGGGTCTTGCTGGTGCATTATGGGAGACTTCAATGTCACGAGGTTTCCCTCCGAGAAGGCTTCCAGGGGCAAGGTGACCAGATCCATGAGACAGTTTAATAGTTTCATTGAGGGGTGCGATCTTTTCGATCCTCCTTTAGTGAATGGGAACTACACTTGGGCTAACAACAGAGCAAGGTCGCGCATTGACAGATGTATGTTTCCCAAGGGGTGGATGGATTTGTTTGACAATGTGAGACAATCGTTAGGCCCAAGGGTAACCTCAGATCATTGGCCGATAATTTTGTCCTCTGGTCCCCAAAAAGGGGGACCATGCCCCTTCAGGTTTGAGAATATGTGGTTGGACCATCCTTCCTTCAAATCTTCCATCATGATGTGGTGGAACATTGAGACCCGAGGCAAATGGGAAGGTTTTCGTTTTATGTGTAAGCTGATAAACCTCAAGGGCTTTTTGAAAGAATGGAATAGAGAAGTTTTTAGAGATATTAAGATCAAGAAGCAAGAGATCATGGGGAGAATCAAAGCCATTGATGACCTTGAAAAGGCAGGTCAGTTCGACATATCCCTGAAAAATGAGCGGATGTCTCTTAAAACTGAGTTGGCTGAGATAATTCGGGAAGGAATCCACAAGTTGGAGACAAAAAGCTAAACTTAAGTGGGCTAAGGAGGGGGATTGCAATTCTGGCTTCTTTCATAGAATAGCGAGTGGTAGAGGAGCAAGAATTTTATTGGATCTTTGGTTAACGACGCGGGGCAAATCATCAAAGGAGAAAAAAAGGTGGAGGGAGAGATCCTCTCCTTTTTTCTAGGCTTTATGTGCCCCAAACGTACCCTAGACCATTCGTGGATGGCCTGGTTTGAAACCCCATTTCTGAGAATGATAAGTCCTTCCTTGATTCAGCGTTTTCCTTGGAGGAGATTACAAAGGCAGTTTTTTAGAGTGATAGGAACAAATCCCCTGGTCCTGATGGTTTTTCAATGGCCTTTTTCCAAAATAACTAGGAGGTGGTTAAGGACGATCTGGTTAAGGTTTTCAAGGAATTCTTTGAACGAGGCATTTTGGACTCCTCCCTGAACGAGACTTTTGTTTGTCTTATTCCCAAAAAGGAAAGGGCAAATAAAGTCAAGGACTTTAGACCCATCAGCTTGATTACTAGCACTTACAAAATCATATCTAAGGTTTTAGCGAACAGGCTTAAGAAAGTCCTTCCCTCCACAATTTTCGAAGCCCAGGGGGCTTTTGTTAAGGGTAGGAAAATTCTTGATCAAGCTCTTATTGCTAACGAGGCCTTAGAGGATTATCGAAGTAGAGGTCGGGAAGGAATCATCTTTAAAATTGACTTTGAGAAAGCCTACGATCATGTGGACTGGGACTTCCTCGATAAGGTTCTTGAAAAGAAAGGCTTTGGTTATAAGTGGAGATCGTGGATCTGGAGCAGTTAGATCGATTCAATATTCTAACCACATGAAGAACCGAACAACAGGGAAGTCTCCATTTGAAATTGTTTATACTAAAATACCTAGACTAACAATGGATCTAACCCATATTCCTTCTTCAATTGACCTTAGTGTTGAAGTTGAAGAAATGGCGGCAAGAATTCAAGAGTTGCACACTCAAGTACATGACCACATCGAGAAGCAGACAGCAAAGTACAAAGTAGCAGCAGATAAAAAGAGGAGATTCAAAGAATTCGCAATAGGAGATCTAGTTATGATCCATCTAAGGAAGAGTAGATTTCCAGCGGAGACTTATAACAAACTCAAGAAGAGGAAGCTCGGCCCATTTCCAATAGTGGACAGATTCGGAGACAATGCTTACAGAATCGACCTCCCTGATGACTATAACATCAATCCTACATTTAATATAGCTGACTTGTATGCGTACAGCCCTCCGAATGAGTTTGTCTTGGCAGATTAACTCAGGGACGAGTTATTTTTTGTGGGCGGGGATGTTTGGTGTAGCCTTTATATGTAAGTTAGTTATTATTTTAGCCTGCCCGCATGTGAGTGGCATGTGTCGTGTACTTCCCTTTTCAGTTTGCTTCCAAGCCTATTTAAAGGCTGGAGCTCTAATAAGAAAAGCAGATTATTGATTGTGATTTATGTTCAAGTTCGGCTACACCAGGTTGGCCCTTTTTGTTGCATTCTATGTCGGAAGGCAGAGGAAAATCTTGATCGCTAGTAATGGGATTGTGAATTTGCTCGCTCTGTCTGGAGCCTCTTCTTTGAGGTCTTCGAGTTTCAGTTTGTGAACCATCGCCGTTGTAGGGATACGATCGAGGAGTTCCTCCTCCATCCGCCATTTCAAGAGAAACGAAAGTTCCTTTGGCATGTTGGCGTGTGTGCTATTTTGTGGGGTTTATGAGGGGAAAGGAACAATTGAATTTTTAGAGGATTCGAGAGACATTCTTGTATGGTTTGGGATAGTATTAGATTTCATGTTTCCTTATGGGCCTCGGTTACCAACGCATTTTGTAATTATCCTCTAGGTCTTATTTTGTTTGACTGGAAACCCTTCATTTAGTTGGGTTCCTCTTTGGGGCTTGGTTTTTTTGGATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCTCGGTTCCTTATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCACCAAACAATGGATTCAGAATCCAATCCAACCCATTATAGTCCCCCAAACAGCCCCCAAGAGTCTTTCATGGTTTAATTGTTTTGATGTTGCTTGTTTAAAGGCCTTTTTTGGTGTGCTCTTTCCAAGTATTTTTCTAATTTTTCCATGATGGATATTTATTTACATTGGGATGTTTTTATTTCTTCCTTTCTGTTTTTCTTTTATTTTTATCTCTTTTATGGAGTTTGTATTTTTAAGCATTAGTCTCTTTTCATTTCCTTAATAAAAAGTTTCGTCTCTTGTTTCAAACAAAGCTAGGAAATCTTCAAAGCCATCATGAATCTCAACAATTTTAAATCTCTTGGATCCAACAAAATGACCCATGAGTTTTAGAAAAAATATTGGAACATTTTGAAAGTCGATTTAATAGGGGTGTTCCAAGACTTTTTTTCAGAAAGGCATCATCAATGCCCAACAAATGAGGCCTATATGTGCCACATCCCAAAGAAATCGAAAGCAACAAAAGCAACAAAAGTCTAGAGAAGTTGGGGCGTTTCTCCTCCTAATCTGCGTTCTTGAAACTCTTAGAAACTACTCCTTCCCTCAAAACTCCTTTGATTGAAGCCATCTGGAAAAACTGTGCCCCAAAGAAGGTTAAGGTCTTCCTTTGGTCCCTTGCCCATAGAAGCCTTAACACTCTAGATTTTCTTCAGAAAAAAATGTAGAAACAGAGTCTTGTCTCCCTTGGTGTGCTCTCTGTGTTTGGCTGATTCAGAGTCCTTGGATCATATTTTCCTTCACTGTCCTTTTGCTGTTGCGGGGTGGAGGTGGTTGCTGGGGGAATTTAATATCTCCATATCCATTCCAGATAGAATTGATGTGTGGCTGGCTGAGGCTTTGACGGGCTGGTTTTTGAAAGGCAGAGACAAGATTTTGTGGGGTATGGTTGTGAGAGCGTTGATGTGGAACATTTGGCTTGAGAGAAACCACCGTGTTTTCGAAGATAAGAGCACGCCCTTCGATTCCTTTTGTTCTAACACTAAATTTATAGCGTCTTGGTGGTGTACAAAGCACAAGAAATTCTTTTGTAACTACAGCTTGTCCATGATTACGTCAAACTGGACCACTTTTGTTTAG

mRNA sequence

ATGGAAGCTCCGAATCTGGGTTCTACGTTCATGAATGAAGGGGCTGTCTCCGAGCAAAATCAGGTTGAGGCGAAGGCAGGACGGGTTTATTCTCAGTCTTTGGCGGTGGTTGAGACTTTTTATCCGTTTGTCGTGGGTATGCAGCAGCCTAGCCCATCTGCTGAGGACCCTTCTTACTCGATGGTCGAGAGCATGATGCCAAATTTCCCCTATGCATCGTTTGGCGCTCTTCCGAGAATGGGGGAGGGGAATCAAGTTGGGAATCCTTTTTCTTCTTGCTATCCAGTTTTTGTCAATCCTAGCGTTTTTCCTGGAGGTCCCTTTCCTCACCCTATGGCTTTCATGTCGGGAGAGTTTGGTCCGTCTTTAATTACGAGTCCTAATGCTTATAGAATCGGACTCGAAGGGAATGACCATCCTTGTGCAATGGGGCTAGTTATAGAGGATTCTGATTGTAAATCTCATTCCTCAAGTCATGTAAGGGTTCCATTTCAGGGGAGTGTTATAGGTCAATGGACCTCGGGATGGGCGGCGTTAGCTTCGGTTGGCATTCAGGCGACCCCGACAAAGGGAGGGCCTTTGAAATCCATCGATCCCCCAGATGCCCCAATGAAAGGAAATCAATTTCGTCAAAGGAAAGGGAAAGGGGGAACCAATAAGACAAATAGGGAACTTAAGAAATTGACGAACTCAAGGGGGAGGGAGAAGAGGAATTTTGTGAAGGAGGTGTTGTCCCAAGAAAACCCGGACATTGTGGTCCTTCTTGAGACAAAGCGGCAGAAGTACTGTAGAAGCTTCGTGAAGAGCGTTTGGGGTAGGAGAAAAGCGAAGTGGGCTGGTATTGAGTCCCTTGGGGCGTCGTGGGGTATTCTTATTATGTGGGATGGGAGCCTGATTTCGATCAAGGAGGTAATCAAAGGAGCCTTCTCGATCTCTATTTCTTTTTCTCTCTCTGGAGCAGAGTCGAGGTCTAAAGGTAGAAAGGAGTTTTGGAACGAGCTGGGTGACCTCTTTGGCCTTTGCGGGTCTTGCTGGTGCATTATGGGAGACTTCAATGTCACGAGGTTTCCCTCCGAGAAGGCTTCCAGGGGCAAGGTGACCAGATCCATGAGACAGTTTAATAGTTTCATTGAGGGGTGCGATCTTTTCGATCCTCCTTTAGTGAATGGGAACTACACTTGGGCTAACAACAGAGCAAGGTCGCGCATTGACAGATAG

Coding sequence (CDS)

ATGGAAGCTCCGAATCTGGGTTCTACGTTCATGAATGAAGGGGCTGTCTCCGAGCAAAATCAGGTTGAGGCGAAGGCAGGACGGGTTTATTCTCAGTCTTTGGCGGTGGTTGAGACTTTTTATCCGTTTGTCGTGGGTATGCAGCAGCCTAGCCCATCTGCTGAGGACCCTTCTTACTCGATGGTCGAGAGCATGATGCCAAATTTCCCCTATGCATCGTTTGGCGCTCTTCCGAGAATGGGGGAGGGGAATCAAGTTGGGAATCCTTTTTCTTCTTGCTATCCAGTTTTTGTCAATCCTAGCGTTTTTCCTGGAGGTCCCTTTCCTCACCCTATGGCTTTCATGTCGGGAGAGTTTGGTCCGTCTTTAATTACGAGTCCTAATGCTTATAGAATCGGACTCGAAGGGAATGACCATCCTTGTGCAATGGGGCTAGTTATAGAGGATTCTGATTGTAAATCTCATTCCTCAAGTCATGTAAGGGTTCCATTTCAGGGGAGTGTTATAGGTCAATGGACCTCGGGATGGGCGGCGTTAGCTTCGGTTGGCATTCAGGCGACCCCGACAAAGGGAGGGCCTTTGAAATCCATCGATCCCCCAGATGCCCCAATGAAAGGAAATCAATTTCGTCAAAGGAAAGGGAAAGGGGGAACCAATAAGACAAATAGGGAACTTAAGAAATTGACGAACTCAAGGGGGAGGGAGAAGAGGAATTTTGTGAAGGAGGTGTTGTCCCAAGAAAACCCGGACATTGTGGTCCTTCTTGAGACAAAGCGGCAGAAGTACTGTAGAAGCTTCGTGAAGAGCGTTTGGGGTAGGAGAAAAGCGAAGTGGGCTGGTATTGAGTCCCTTGGGGCGTCGTGGGGTATTCTTATTATGTGGGATGGGAGCCTGATTTCGATCAAGGAGGTAATCAAAGGAGCCTTCTCGATCTCTATTTCTTTTTCTCTCTCTGGAGCAGAGTCGAGGTCTAAAGGTAGAAAGGAGTTTTGGAACGAGCTGGGTGACCTCTTTGGCCTTTGCGGGTCTTGCTGGTGCATTATGGGAGACTTCAATGTCACGAGGTTTCCCTCCGAGAAGGCTTCCAGGGGCAAGGTGACCAGATCCATGAGACAGTTTAATAGTTTCATTGAGGGGTGCGATCTTTTCGATCCTCCTTTAGTGAATGGGAACTACACTTGGGCTAACAACAGAGCAAGGTCGCGCATTGACAGATAG

Protein sequence

MEAPNLGSTFMNEGAVSEQNQVEAKAGRVYSQSLAVVETFYPFVVGMQQPSPSAEDPSYSMVESMMPNFPYASFGALPRMGEGNQVGNPFSSCYPVFVNPSVFPGGPFPHPMAFMSGEFGPSLITSPNAYRIGLEGNDHPCAMGLVIEDSDCKSHSSSHVRVPFQGSVIGQWTSGWAALASVGIQATPTKGGPLKSIDPPDAPMKGNQFRQRKGKGGTNKTNRELKKLTNSRGREKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGASWGILIMWDGSLISIKEVIKGAFSISISFSLSGAESRSKGRKEFWNELGDLFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWANNRARSRIDR

Homology

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BLAST of Spg024633 vs. NCBI nr
Match: XP_028075126.1 (uncharacterized protein LOC114277426 [Camellia sinensis])

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-37
Identity = 87/187 (46.52%), Postives = 116/187 (62.03%), Query Frame = 0


Query: 232 RGREKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGASWGIL 291
           R R KR+ VK++L  + PD+V+  ETK ++  R F++SVWG R  +WA + S G S GIL
Sbjct: 12  RSRRKRDVVKDILKTQQPDVVMFQETKCEECDRVFIRSVWGTRFRRWAVLPSTGRSGGIL 71

Query: 292 IMWDGSLISIKEVIKGAFSISISFS--------LSG--AESRSKGRKEFWNELGDLFGLC 351
           IMWD  ++S  EV+ G FS+SI F         L+G    +R   R+++W+ELG LFGLC
Sbjct: 72  IMWDDRVVSECEVVVGVFSLSIKFRNRDNKEWWLTGVYGPNRPWSRQDWWDELGGLFGLC 131

Query: 352 GSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN---NR 406
              WC+  DFNV R  SEK +     RSMR F+SFI  C+L DPPL N  +TW+N   NR
Sbjct: 132 TPNWCVGWDFNVVRLASEKLNGVSTNRSMRDFDSFIRECELIDPPLSNARFTWSNLQENR 191

[Close]

BLAST of Spg024633 vs. NCBI nr
Match: RVW91468.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-36
Identity = 85/192 (44.27%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  +K+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 171 NVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTIRNKDWVALPASGA 230

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD  ++S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 231 SGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFD 290

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 406
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 291 IYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSN 350

[Close]

BLAST of Spg024633 vs. NCBI nr
Match: RVW93866.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 163.3 bits (412), Expect = 4.3e-36
Identity = 85/192 (44.27%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  +K+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 7   NVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGA 66

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD  ++S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 67  SGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWISVVYGPNSPSLRKDFWVELFD 126

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 406
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 127 IYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSN 186

[Close]

BLAST of Spg024633 vs. NCBI nr
Match: XP_028093340.1 (uncharacterized protein LOC114293463 [Camellia sinensis])

HSP 1 Score: 162.5 bits (410), Expect = 7.4e-36
Identity = 85/179 (47.49%), Postives = 111/179 (62.01%), Query Frame = 0


Query: 240 VKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGASWGILIMWDGSLI 299
           VKEVL  + PDIV+  ETK ++  R F++SVWG R  +WA + S G S GILIMWD  ++
Sbjct: 4   VKEVLKMQQPDIVMFQETKCEECDRIFIRSVWGTRFRRWAVLPSTGRSGGILIMWDDRVV 63

Query: 300 SIKEVIKGAFSISISFS--------LSGAESRSK--GRKEFWNELGDLFGLCGSCWCIMG 359
           S  EV+ G FS+SI+F         L+G     K   R+E+W+EL  LFGLC   WC+ G
Sbjct: 64  SKCEVVAGVFSLSINFRNRDNKVWWLTGVYGPIKPGSRQEWWDELAGLFGLCSPNWCVGG 123

Query: 360 DFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN---NRARSRIDR 406
           DFNV R  SEK +    +RSMR F+SFI  C+L D PL N  +TW+N   NR   ++DR
Sbjct: 124 DFNVVRLASEKLNGVSTSRSMRDFDSFIRDCELIDLPLSNARFTWSNLQENRVCCKLDR 182

[Close]

BLAST of Spg024633 vs. NCBI nr
Match: RVW16209.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 162.5 bits (410), Expect = 7.4e-36
Identity = 82/180 (45.56%), Postives = 110/180 (61.11%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  +K+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 57  NVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGA 116

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD  ++S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 117 SGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFD 176

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 397
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 177 IYGLTYPLWCVGGDFNVIRGSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSN 236

[Close]

BLAST of Spg024633 vs. ExPASy TrEMBL
Match: A0A438I435 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_401 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 85/192 (44.27%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  +K+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 171 NVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTIRNKDWVALPASGA 230

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD  ++S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 231 SGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFD 290

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 406
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 291 IYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSN 350

[Close]

BLAST of Spg024633 vs. ExPASy TrEMBL
Match: A0A438IAX3 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_367 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-36
Identity = 85/192 (44.27%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  +K+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 7   NVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGA 66

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD  ++S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 67  SGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWISVVYGPNSPSLRKDFWVELFD 126

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 406
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 127 IYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSN 186

[Close]

BLAST of Spg024633 vs. ExPASy TrEMBL
Match: A0A438BYX6 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_276 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.6e-36
Identity = 82/180 (45.56%), Postives = 110/180 (61.11%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  +K+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 57  NVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGA 116

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD  ++S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 117 SGGILIIWDSKILSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFD 176

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 397
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 177 IYGLTYPLWCVGGDFNVIRGSSEKMGGSSLTPSMRDFDSFISECELLDPPLRNASFTWSN 236

[Close]

BLAST of Spg024633 vs. ExPASy TrEMBL
Match: A5B9F0 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_035345 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.7e-36
Identity = 82/192 (42.71%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N+RG   R+KR  VK+ L  E PDIV++ ETK+ +  R FV S+W  R  +WA + + GA
Sbjct: 786 NTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAVLPACGA 845

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSGAE----------SRSKGRKEFWNELGD 349
           S GIL+MWD   +  +EV+ G+FS+S+ F++ G+E          + +  RK+FW EL D
Sbjct: 846 SGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNSTALRKDFWEELSD 905

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 406
           +FGL   CWC+ GDFNV R  SEK   G++T SM+  + FI   +L DPPL + ++TW+N
Sbjct: 906 IFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSN 965

[Close]

BLAST of Spg024633 vs. ExPASy TrEMBL
Match: A0A438IBZ1 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_158 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-36
Identity = 86/192 (44.79%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 230 NSRG---REKRNFVKEVLSQENPDIVVLLETKRQKYCRSFVKSVWGRRKAKWAGIESLGA 289
           N RG   R KR  VK+ L  ENPD+V++ ETK++   R FV SVW  R   W  + + GA
Sbjct: 403 NVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVALPASGA 462

Query: 290 SWGILIMWDGSLISIKEVIKGAFSISISFSLSG----------AESRSKGRKEFWNELGD 349
           S GILI+WD   +S +EV+ G+FS+S+ FSL G            +    RK+FW EL D
Sbjct: 463 SGGILIIWDSKNLSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDFWVELFD 522

Query: 350 LFGLCGSCWCIMGDFNVTRFPSEKASRGKVTRSMRQFNSFIEGCDLFDPPLVNGNYTWAN 406
           ++GL    WC+ GDFNV R  SEK     +T SMR F+SFI  C+L DPPL N ++TW+N
Sbjct: 523 IYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNASFTWSN 582

The following BLAST results are available for this feature:

BLAST of Spg024633 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028075126.1	1.3e-37	46.52	uncharacterized protein LOC114277426 [Camellia sinensis]	[more]
RVW91468.1	3.3e-36	44.27	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW93866.1	4.3e-36	44.27	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
XP_028093340.1	7.4e-36	47.49	uncharacterized protein LOC114293463 [Camellia sinensis]	[more]
RVW16209.1	7.4e-36	45.56	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]

BLAST of Spg024633 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438I435	1.6e-36	44.27	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438IAX3	2.1e-36	44.27	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438BYX6	3.6e-36	45.56	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A5B9F0	4.7e-36	42.71	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438IBZ1	6.1e-36	44.79	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]

BLAST of Spg024633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 227..405 e-value: 1.5E-16 score: 62.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 234..405
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..222
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 230..365
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 230..365

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024633.1	Spg024633.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0004518	nuclease activity