Spg024617 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024617
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionG-box-binding factor 1-like
Locationscaffold12: 15985890 .. 15994335 (-)
RNA-Seq ExpressionSpg024617
SyntenySpg024617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTGGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTATTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGCGTTTGATGTGTATTTCATTAATTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAGAGTAGAGTGTGAATGTGAATCTTAATCCAATTGTTTTAAAATTCATGAGCATGGAAAGACAAAGCTATGTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGGCAAAATGAATTTCGAAAATTGTTTCCAACGGTTTCATGTTTAGATGTTTTACATGTTTTCCTATGAATGATTCATGATTTCTATTAATGTATTCAAGCATGAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCAAGTGTCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCATGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATATTGTCGTGAGTGCTGGGCGGGCAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTATTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTATCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCTGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTCTAAATGTTTTGTAAGGATTGGATAATATCGTCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGCCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTAAATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAAGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAATGAGACATGGTAGTTAGTGCTAAGAAAAATCCAGGAAGTAAATAGTTAGACGTTTGGTCAGTTTAGATAGAACTAACGGAGGATGGTCTGAGTATTGTTGAGAGTGAGTGCAGTCAGGACTAGAATGTGGGTATAAGTTTAGTATCATGCATTTGAGTGAAGTATCTATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCACCACGTACTAGCAGACGACGCAGGCAGAATCAGGACGGGACGCAGGATCCTACCCAAAGTCAATCTGAAAGGGGATCCAGTACCCCGAGAGGTCAGGATGAGGCAGGGAGTGAGCGATTTGCTAGATCTGCACAGGAGATCGGTAGGCTAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGATGTATGGGATAGAACGGTTGAAGAAGTTAGGAGTCGCAGTGTTTGAGGGTTCCACGGATCCAGCTGACGCCGAGGTCTAGTTGAATATGCTGGAGTAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAAATTAGCCACATTCCTTTTGCAGAAGGAGGCGGAGGGATGGTGGAAGTCCATTATAGCCAGGCGCAGTGATGCACGTACGTTAGATTGGCAGACATTTAGAGGCATATTCGAGGAAAAGTATTATCCCACCACATATTGTGAGGCAAAAAGAGATGAGTTTCTGGAGCTAAAACAAGGGTCACTTTCAGTGGCCGAGTACGAGAGAAAGTATACCGAGCTTTCACGGTATGCTGAAGTGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCCCAGTTACCGCTATTGCCAAGTGGACGGATTTTTTCCAGCTAGTAGAGACTGCTTTACGTGTGGAACAGAGTATTATAGAGGAAAAGTCGGCTGCGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTCCGAGGTCGTGAGCAACGGAGGTTCACACCTGGAGTGAATGTTTCAGGCCGTCAAGACTTCAAGCGTCGATCTGGTGGCCAGTTGTCAATGCAGATGAGTTCGGGTAGTGCCTATCAGAGGCAGAGTTAGAGAGCCCCCAGTCAGTCTGCGAGTTCAGTAGCAAGACCGCGAACGGGTCAGGAGTCCGTTGCAAGTGAACCCAGGAGAACCTCATGTGTAAGTTGTGGCAAGAATCATCGGGGTCAGTGTCTTGTTGGCGCCGGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGCCCACAGCTGAGGGCAGCAGTTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCGAGAATCCCAGTAGCCGCAGGAGAGGGAACCAGTGGTGCAAGGAAAAAGGGAGTTGTGGGGAGACCTAGGCAGCAGGGAAAAGTCTACGCCATGACTCAACAGGAAGCAGAGGATGCACCAGATGTGATCACTGGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGCGCTACGCATTCCTTTGTTTCTAGTATGTTTTTAACTAAGCTGGATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACATTTTATTAGTTAATGAGGTGTTGCGTGATTGTGAGGTTGTAGTAGAAGGTCTCTGTATGTTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATGGATTTCTTATTCACTCACTATGCTTCTATGGATTGCCATAGGAAGGAAGTGACTTTTAAGAAACCAGGTTTGACTGAAGTAGTTTTCAGAGGTGAGAGGAAGATTATTCCTACGAGTTTGATTTCAGCTCTGAAAGCTGAGAAGTTGTTGAGGAAAGGTTGCACAGCGTTTCTTGCACACGTAGTAGAGGTGCAAGAAGAAAAGCTGAAACCAGAAGATGTTCCTGTGGTGAACGAATTTCTTGATGTTTTTCCGACTGATCTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACATCACCTATTTCACAGGCACCATACAGGATGGCTCCGAGCGAGCTTAAGGAGCTGAAGGTGTAGTTGCAAGAACTAGTCGACAAAGGATACATCAGGCTTAGCGTATCACCTTGGGGAGCTCCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTGAGATTATGCATTGATTACAGGTAGTTAAACAAGGTCACGATACGTAACAAGTATCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAGGGGAGCAGCGGTGTTCTCTAAGATTGATCTGAGGTCAGGATACCACCAGTTGAAGGTTAGGGAATCAGATATTCCTAAGACAGCATTTAGGACGAGGTATGGGCACTATGAGTTTTTAGTAATGCCATTCGGTTTAACGAATGCGCCAGCAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATCGATGACATACTAGTTTACTCAGTTGACGTAAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACACTACGTGATAAACAACTATACGCTAAGTTCAGCAAGTGTGAGTTCTGGTTGAATCAAGTGGTGTTCTTAGGGCATGTAGTTTCAGCGGACGGAGTTAGTGTTGACCCGCAGAAAGTGGAAGCTGTTGTCAACTGGGAGAGACCAGCTAGTGCAACAGAGGTACGTAGTTTCCTAGGCCTGGCCAGATACTACAGACGTTTTGTTGAGGATTTCTCACGGTTAGCATTACCCTTGACAGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGCGAACAGAGTTTCCAGGAGCTGAAGAAGAGATTGGTGACAGCACCTATTCTAGCACTTCCTGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCAAGGCAAGGATTAGGTTGCGTGCTGATGCAGGAAGGAAAGGTGATAGCTTATGCTTCAAGGTAGTTGAAGAAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCATTAGTTGTTTTAGCACTGAAGATCTGGAGACATTATTTATTCGGTGAGAAGTGCCACATTTTCACAGATCATAAGAGTTTGAAGTATATCTTTGATCAGAAAGAGCTGAATCTAAGGCAGAGGCGATGGCTAGAACTGATTAAAGATTATGACTGCACGATATAATATCATCCAGGTAAGGCTAACGTGGTAGCAGATGCGCTGAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGCAAGCTTGCTATGTGAGTTAAGAGGTTTCAAGGCAGTTATGACTGCAGGAAGCTCAGGGAGTCTTCTAGCTCAATTTCAGGTTAGGTCTTCTTTAGTAGCAGAGATTGTGGGAAGACAGCCAGAGGATAGTAATTTGCAGAAGATGCTTGCAAAGTCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAACAGACGGAGCCATAGTTAAGCAGGGAAGACTATGCGTTCCGAGTATTAGTGAGCTTAAGAGTGCTATATTAGAGGAAGCTCACAGTTCAGCTTACGCTATGCATCCAAGAAGCACCAAGATGTATAGAACTCTGAAGAAAACTTATTGGTGGCCTGGTATGAAGCGGGAGATAGCTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACCAGTGAGACAGAGGCCAGGAGGACTCCTTAATCCACTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCTCGTACTTCTAGTGGACATGATGGTATATGGGTAATAGTGGATAGACTCACCAAGACAGCGCGGTTTATACCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAACTATACGTCGACAGGATTGTGAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGATAGGGATCCAAGGTTTACTTCAAAGTTTTGGCCTAGTGTGCAGAAAGCAATGGGAACAAAGTTGAAGTTCAGTACGGCATTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAGTTGGAATACCCACTTATCACTTATGGAGTTCGCTTATAATAACAGCTATCAGTCTAGTATCGGCATGGCACCATTCGAGGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGGTCCTGAGTTGGTACGAGTTACGTCAGACAATATTAAGCTGTTTAGGGAGAATCTGAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAAGTTGGAGATCGAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTATTCGCTTTGGGAGGAAAAGTAAGCTGAGTCCTAGATATATTGGTCCTTACCAGATATTAGAACGAGTTGGACCAGCAGCCTATAGACTTGAGGTGCCAGTGGAACTCGCTCGAATACATGATGTTTTCCATGTGTCCATGTTGAGGAAATATATTCCAGATCCGTCCCATGTGTTGCGAATGCAACCAATTGAGCTGAAGGAAGACTTGAGTTATAAGGAGGAAGCGGTTCAGATCCTCGACAGGAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCACAGAGTTGAGAAGGCAACCTGGGAGTCAGAAGATCAAATGAGGAGGAGTTACCCGACACTCTTCACCTAAGAACTTCTAAATTTCGAGGACGAAATTTCATAAGGGGGAGGTAAGTTGTAAACCCGAGACTTTCCCTTAGATAATTTTCTCTTATCATCTATTGTGGCTTCATGGTTGAACCTAAGTTGTTGGAAATTATACATTTAAAAAGAAAGGAATTAAACAAGTGAAGAAAAGAAAAGAAAAGAAAAGGAAAAGGAAAAGGGAAAAAGGAAAAAAAAAAAAAAAAGAAAAGGAAAGAAAGAAGATGGGAAATGACAGCAAGACACCCACCACCGACTACACTTTTTATCAGCCCATTTTCATTTCATTTCTCATCTTTTTCCATCCACATCTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAATCAAGAGGTTAGGTTTGATTTTCTTGAAAGTTAGTTCATTTTCTAACAAATTTTATGAAGGAAGCTTGACCTAAATCGTATGAGAAGTTGATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTATGATGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTCTTGGGTATGGTTGGAAAGCTTATTCAATTATCTACAACTTTCATGAAGAATGTGTGAGCCAAAAATGACTTGAAGTAGGTTTACTTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTATTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTATATTTCATTAATTTTGGTTAAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAGAGTAGAGTGTGAATGTGAATCTTAATCCAATTGTTTTAAAATTCATGAGCATGGAAAGACAAAGCTATGTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGATTGTGAGTGGCAAAATGAATTTCGAAAATTGTTTCCAACGGTTTCATGTTTAGATGTTTTACATGTTTTCCTATGAATGATTCATGATTTCTATTAACGGTTTCAAGCATGAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCATGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATACTGTCGTGAGTGCTGGGCGGGCAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTATCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCTGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAG

mRNA sequence

AAGCTGGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTATTCAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATATTGTCGTGAGTGCTGGGCGGGCAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTATTCAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATACTGTCGTGAGTGCTGGGCGGGCAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTAGAGATCGAGCTCCCGGTGCCTGA

Coding sequence (CDS)

AAGCTGGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTATTCAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATATTGTCGTGAGTGCTGGGCGGGCAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTATTCAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATACTGTCGTGAGTGCTGGGCGGGCAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTAGAGATCGAGCTCCCGGTGCCTGA

Protein sequence

KLESVLSDFGAFLDKLVGNLVFIYSGYIPLSTLSVLRDNDIVVSAGRAKTMGVLGGPHYIVGLVNVGCTGRALHNVEIELPVPDTLPTSAESSRTSSKKLESVLSDFGAFLDKLVGNLVFIYSGYIPLSTLSVLRDNDTVVSAGRAKTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCRDRAPGA
Homology
[Close]
BLAST of Spg024617 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-17
Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 29  PLSTLSVLRDNDIVVSAGRA---KTMGVLGGPHYIVGLVNVGCTGRALHNV----EIELP 88
           PLSTLSVLRDND VVS G+    K  GV GGPHYIVGLVNVGCTGR LH++    EIEL 
Sbjct: 195 PLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIELL 254

Query: 89  VPDTLPTSAESSRTSS 98
           VPDTLPTSAESS ++S
Sbjct: 255 VPDTLPTSAESSGSNS 270

[Close]
BLAST of Spg024617 vs. NCBI nr
Match: TYK21003.1 (G-box-binding factor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 9.0e-05
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 147 KTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCRDR 182
           KTMG+LG PHYIV L+NVGC G ALHNVD SC  R
Sbjct: 3   KTMGMLGRPHYIVELINVGCIGSALHNVDLSCVSR 37

[Close]
BLAST of Spg024617 vs. NCBI nr
Match: TYK02142.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-04
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 149 MGVLGGPHYIVGLVNVGCTGRALHNVDRSCR 180
           MGVL GP+YIV LVNVGCTG ALHNVD SC+
Sbjct: 2   MGVLDGPYYIVELVNVGCTGHALHNVDLSCK 32

[Close]
BLAST of Spg024617 vs. NCBI nr
Match: TYJ96837.1 (uncharacterized protein E5676_scaffold2750G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 7.6e-04
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 51 MGVLGGPHYIVGLVNVGCTGRALHNVEIELPVPD 85
          MGVLG PHY+V LV VGC+GRALHNVE EL   D
Sbjct: 1  MGVLGRPHYVVELVTVGCSGRALHNVETELATGD 34

[Close]
BLAST of Spg024617 vs. NCBI nr
Match: KAA0054410.1 (uncharacterized protein E6C27_scaffold24G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 7.6e-04
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 51 MGVLGGPHYIVGLVNVGCTGRALHNVEIELPVPD 85
          MGVLG PHY+V LV VGC+GRALHNVE EL   D
Sbjct: 1  MGVLGRPHYVVELVTVGCSGRALHNVETELATGD 34

[Close]
BLAST of Spg024617 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 55/76 (72.37%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 29  PLSTLSVLRDNDIVVSAGRA---KTMGVLGGPHYIVGLVNVGCTGRALHNV----EIELP 88
           PLSTLSVLRDND VVS G+    K  GV GGPHYIVGLVNVGCTGR LH++    EIEL 
Sbjct: 195 PLSTLSVLRDNDAVVSVGQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIELL 254

Query: 89  VPDTLPTSAESSRTSS 98
           VPDTLPTSAESS ++S
Sbjct: 255 VPDTLPTSAESSGSNS 270

[Close]
BLAST of Spg024617 vs. ExPASy TrEMBL
Match: A0A5D3DBQ7 (G-box-binding factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00320 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-05
Identity = 26/35 (74.29%), Postives = 28/35 (80.00%), Query Frame = 0 

Query: 147 KTMGVLGGPHYIVGLVNVGCTGRALHNVDRSCRDR 182
           KTMG+LG PHYIV L+NVGC G ALHNVD SC  R
Sbjct: 3   KTMGMLGRPHYIVELINVGCIGSALHNVDLSCVSR 37

[Close]
BLAST of Spg024617 vs. ExPASy TrEMBL
Match: A0A5D3BTL2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00270 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-04
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 149 MGVLGGPHYIVGLVNVGCTGRALHNVDRSCR 180
           MGVL GP+YIV LVNVGCTG ALHNVD SC+
Sbjct: 2   MGVLDGPYYIVELVNVGCTGHALHNVDLSCK 32

[Close]
BLAST of Spg024617 vs. ExPASy TrEMBL
Match: A0A5A7UGM3 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001600 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 51 MGVLGGPHYIVGLVNVGCTGRALHNVEIELPVPD 85
          MGVLG PHY+V LV VGC+GRALHNVE EL   D
Sbjct: 1  MGVLGRPHYVVELVTVGCSGRALHNVETELATGD 34

[Close]
BLAST of Spg024617 vs. ExPASy TrEMBL
Match: A0A5D3BCI7 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00350 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.7e-04
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 

Query: 51 MGVLGGPHYIVGLVNVGCTGRALHNVEIELPVPD 85
          MGVLG PHY+V LV VGC+GRALHNVE EL   D
Sbjct: 1  MGVLGRPHYVVELVTVGCSGRALHNVETELATGD 34

The following BLAST results are available for this feature:
BLAST of Spg024617 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK08801.13.5e-1772.37hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
TYK21003.19.0e-0574.29G-box-binding factor 1-like [Cucumis melo var. makuwa][more]
TYK02142.12.6e-0480.65CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYJ96837.17.6e-0473.53uncharacterized protein E5676_scaffold2750G00350 [Cucumis melo var. makuwa][more]
KAA0054410.17.6e-0473.53uncharacterized protein E6C27_scaffold24G001600 [Cucumis melo var. makuwa][more]
BLAST of Spg024617 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg024617 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CAC61.7e-1772.37Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DBQ74.4e-0574.29G-box-binding factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3BTL21.3e-0480.65CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7UGM33.7e-0473.53DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3BCI73.7e-0473.53DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of Spg024617 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024617.1Spg024617.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane