Spg024539 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024539
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	dehydration-responsive element-binding protein 1D-like
Location	scaffold12: 19290110 .. 19290712 (-)
RNA-Seq Expression	Spg024539
Synteny	Spg024539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTTCTGATTCTTCTTCCTCCTCCCACTCAAAACTCTTTGCCTGCCGCTCCGACGACGACATTCTCTTGGCCTCCCGATACCCCAAGAAGAGGGCCGGCAGAAAGAAGTTCAAGGAGACTCGCCACCCCGTCTACCGTGGTGTCCGCCGCCGCAACTCCGGCAAGTGGGTCTGCGAGGTCAGGGAGCCCAATAAGAAGACTAGGATTTGGCTCGGCACTTTCCCCACCGCCGAGATGGCCGCCAGGGCCCACGACGTCGCTGCCATTGCCCTCCGCGGCCGCTCCGCCTGCCTCAATTTCGCCGACTCCGCCTCCACGCTTCCCCTGCCGCCCACCGTCGACGCCAAGGATATTCAGAAGGCCGCCGCCGAGGCTGCCGAGGCCTTTCGCCCGCCGGAGCCTGCGCCTTCCGCGGCGGCCGAGGCGGCGACGGCGGCGGAGGAGGTGTTTTACTTGGATGAGGAGGCGGTGTTTGGGATGCCCGGGTTGCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCGAATTGCGACTATGGGGCTAATTCCATGGATCTCGATGCCGACATGTCGTTATGGAGTTACTCAATTTGA

mRNA sequence

ATGGATGTTTCTGATTCTTCTTCCTCCTCCCACTCAAAACTCTTTGCCTGCCGCTCCGACGACGACATTCTCTTGGCCTCCCGATACCCCAAGAAGAGGGCCGGCAGAAAGAAGTTCAAGGAGACTCGCCACCCCGTCTACCGTGGTGTCCGCCGCCGCAACTCCGGCAAGTGGGTCTGCGAGGTCAGGGAGCCCAATAAGAAGACTAGGATTTGGCTCGGCACTTTCCCCACCGCCGAGATGGCCGCCAGGGCCCACGACGTCGCTGCCATTGCCCTCCGCGGCCGCTCCGCCTGCCTCAATTTCGCCGACTCCGCCTCCACGCTTCCCCTGCCGCCCACCGTCGACGCCAAGGATATTCAGAAGGCCGCCGCCGAGGCTGCCGAGGCCTTTCGCCCGCCGGAGCCTGCGCCTTCCGCGGCGGCCGAGGCGGCGACGGCGGCGGAGGAGGTGTTTTACTTGGATGAGGAGGCGGTGTTTGGGATGCCCGGGTTGCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCGAATTGCGACTATGGGGCTAATTCCATGGATCTCGATGCCGACATGTCGTTATGGAGTTACTCAATTTGA

Coding sequence (CDS)

ATGGATGTTTCTGATTCTTCTTCCTCCTCCCACTCAAAACTCTTTGCCTGCCGCTCCGACGACGACATTCTCTTGGCCTCCCGATACCCCAAGAAGAGGGCCGGCAGAAAGAAGTTCAAGGAGACTCGCCACCCCGTCTACCGTGGTGTCCGCCGCCGCAACTCCGGCAAGTGGGTCTGCGAGGTCAGGGAGCCCAATAAGAAGACTAGGATTTGGCTCGGCACTTTCCCCACCGCCGAGATGGCCGCCAGGGCCCACGACGTCGCTGCCATTGCCCTCCGCGGCCGCTCCGCCTGCCTCAATTTCGCCGACTCCGCCTCCACGCTTCCCCTGCCGCCCACCGTCGACGCCAAGGATATTCAGAAGGCCGCCGCCGAGGCTGCCGAGGCCTTTCGCCCGCCGGAGCCTGCGCCTTCCGCGGCGGCCGAGGCGGCGACGGCGGCGGAGGAGGTGTTTTACTTGGATGAGGAGGCGGTGTTTGGGATGCCCGGGTTGCTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCGAATTGCGACTATGGGGCTAATTCCATGGATCTCGATGCCGACATGTCGTTATGGAGTTACTCAATTTGA

Protein sequence

MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNCDYGANSMDLDADMSLWSYSI

Homology

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BLAST of Spg024539 vs. NCBI nr
Match: XP_038907097.1 (dehydration-responsive element-binding protein 1D-like [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 8.3e-81
Identity = 168/213 (78.87%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           MD SD  S+S  +     SD+++LLASRYPKKRAGRKKFKETRHP+YRGVRRRNSGKWVC
Sbjct: 1   MDFSDELSTSCHR--TNHSDEELLLASRYPKKRAGRKKFKETRHPIYRGVRRRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTA+MAARAHDVAAIALRGRSACLNFADSASTLP+P TVD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSASTLPIPATVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEE-------VFYLDEEAVFGMPGLLADMAEAM 180
           Q+AAA+AAEAFRPPE     AA  ATAA E       +FYLDEEAVFGMPGLLADMAEAM
Sbjct: 121 QRAAAQAAEAFRPPEDESRTAAAGATAAAEEEEEEEGMFYLDEEAVFGMPGLLADMAEAM 180

Query: 181 LLPPPNC------DYGANSMDLDADMSLWSYSI 201
           LLPPPNC      DYGANSMD DADMSLWSYSI
Sbjct: 181 LLPPPNCVGNDNDDYGANSMDFDADMSLWSYSI 211

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BLAST of Spg024539 vs. NCBI nr
Match: XP_004143704.1 (dehydration-responsive element-binding protein 1B [Cucumis sativus] >KGN50431.1 hypothetical protein Csa_000502 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-76
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           MD SD+SSSSH       SDD++LLASRYPKKRAGRKKFKETRHP+YRGVR RNSGKWVC
Sbjct: 1   MDFSDASSSSHRSTL---SDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTL +P +VD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNC 180
           Q+AAAEAAEAFRP +         A   EE FYLDEE  FGMPGLL DMAEAMLLPPPNC
Sbjct: 121 QRAAAEAAEAFRPQDD----ELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 -------DYGANSMDLDADMSLWSYSI 201
                   +GANSMD DADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 200

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BLAST of Spg024539 vs. NCBI nr
Match: XP_008467214.1 (PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 3.6e-76
Identity = 159/207 (76.81%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           M++SD+SSSSH       SDD++LLASRYPKKRAGRKKFKETRHP+YRGVR RNSGKWVC
Sbjct: 1   MELSDASSSSHRSTL---SDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTL +P +VD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNC 180
           Q+AAAEAAEAFRPP+             EE FYLDEE  FGMPGLL DMAEAMLLPPPNC
Sbjct: 121 QRAAAEAAEAFRPPDDHEYL---RPAVVEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 -------DYGANSMDLDADMSLWSYSI 201
                   +GANSMD DADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 201

[Close]

BLAST of Spg024539 vs. NCBI nr
Match: TYK00288.1 (dehydration-responsive element-binding protein 1D-like [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75
Identity = 158/207 (76.33%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           M++SD+SSSSH       SDD++LLASRYPKKRAGRKKFKETRHP+YRGVR RNSGKWVC
Sbjct: 1   MELSDASSSSHRSTL---SDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTL +P +VD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNC 180
           Q+AAAEAAEAFRPP+             EE FYLDEE  FGMPGLL DMAEAMLLPPPNC
Sbjct: 121 QRAAAEAAEAFRPPDDHEYL---RPAVVEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 -------DYGANSMDLDADMSLWSYSI 201
                   +G NSMD DADMSLWSYSI
Sbjct: 181 VGNYDNDHFGTNSMDFDADMSLWSYSI 201

[Close]

BLAST of Spg024539 vs. NCBI nr
Match: XP_022995351.1 (dehydration-responsive element-binding protein 1E-like [Cucurbita maxima])

HSP 1 Score: 291.2 bits (744), Expect = 6.8e-75
Identity = 158/210 (75.24%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACR----SDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MD  D+SSSS+S+ F  R    SD+++LLASR+PKKRAGRKKFKETRHPVYRGVRRRNSG
Sbjct: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S LP P ++D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120

Query: 121 AKDIQKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLP 180
            KDIQ+AAAEAAEAFRPPE AP         AE++F  D +A   MPG LADMAEAMLLP
Sbjct: 121 PKDIQRAAAEAAEAFRPPETAP---------AEDMFCFDNDA---MPGFLADMAEAMLLP 180

Query: 181 PPNC------DYGANSMDLDADMSLWSYSI 201
           PPNC      DYG NSMD DADMSLWSYSI
Sbjct: 181 PPNCVATDHDDYGPNSMDFDADMSLWSYSI 198

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BLAST of Spg024539 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-55
Identity = 124/209 (59.33%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 7   SSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPN 66
           S S H    +  S+    LAS  PKKRAGRKKF+ETRHP+YRGVR+RNSGKWVCEVREPN
Sbjct: 14  SISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPN 73

Query: 67  KKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAE 126
           KK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADSA  L +P T   K+IQKAA+E
Sbjct: 74  KKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASE 133

Query: 127 AAEAFR--PPEPAPSAAAEAATAAEE---------------VFYLDEEAVFGMPGLLADM 186
           AA AF+          AAEA  AA E               VFY+D+EA+ GMP    +M
Sbjct: 134 AAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENM 193

Query: 187 AEAMLLPPPNCDYGANSMDLDADMSLWSY 199
           AE MLLPPP   +  N  D   D+SLWS+
Sbjct: 194 AEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

[Close]

BLAST of Spg024539 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.5e-53
Identity = 121/188 (64.36%), Postives = 135/188 (71.81%), Query Frame = 0


Query: 25  LASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 84
           LAS  PKK AGRKKF+ETRHP+YRGVRRRNSGKWVCEVREPNKKTRIWLGTF TAEMAAR
Sbjct: 29  LASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAAR 88

Query: 85  AHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAEAAEAFRPP---------- 144
           AHDVAA+ALRGRSACLNFADSA  L +P +  AKDIQKAAAEAA AF+            
Sbjct: 89  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGF 148

Query: 145 --EPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNCDYGANSM--DLD 199
             E     A   A  +E  FY+ +EA+F MP LLA+MAE MLLP P+  +  N      D
Sbjct: 149 DMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD 208

[Close]

BLAST of Spg024539 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-53
Identity = 119/188 (63.30%), Postives = 135/188 (71.81%), Query Frame = 0


Query: 25  LASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 84
           LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWV EVREPNKKTRIWLGTF TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 85  AHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAEAAEAFRPP---------- 144
           AHDVAA+ALRGRSACLNFADSA  L +P +  AKDIQKAAAEAA AF+            
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 145 ---EPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNCDYGAN-SMDLD 199
              E     A      +E  FY+DEE +FGMP LL +MAE MLLPPP+  +  N   + D
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGD 205

[Close]

BLAST of Spg024539 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 7.1e-51
Identity = 118/209 (56.46%), Postives = 141/209 (67.46%), Query Frame = 0


Query: 4   SDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVR 63
           S+   S +    +   D    LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWVCE+R
Sbjct: 8   SEMFGSDYESPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELR 67

Query: 64  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKA 123
           EPNKKTRIWLGTF TAEMAARAHDVAAIALRGRSACLNFADSA  L +P +  AK+IQKA
Sbjct: 68  EPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKA 127

Query: 124 AAEAAEAFRPP-------------EPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMA 183
           AAEAA  F+               E     A      +++ FY+DEEA+ GM  LL +MA
Sbjct: 128 AAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMA 187

Query: 184 EAMLLPPPNCDYGAN-SMDLDADMSLWSY 199
           E MLLP P+  +  N  ++ D D+SLWSY
Sbjct: 188 EGMLLPSPSVQWNYNFDVEGDDDVSLWSY 216

[Close]

BLAST of Spg024539 vs. ExPASy Swiss-Prot
Match: A2X899 (Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. indica OX=39946 GN=DREB1G PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.9e-46
Identity = 121/225 (53.78%), Postives = 144/225 (64.00%), Query Frame = 0


Query: 1   MDVSDSSSSSHS----KLFACRSDDD----ILLASRYPKKRAGRKKFKETRHPVYRGVRR 60
           MDVS + SS +S       A  +DD     + ++S  PK+RAGR KFKETRHPV++GVRR
Sbjct: 1   MDVSAALSSDYSSGTPSPVAADADDGSSAYMTVSSAPPKRRAGRTKFKETRHPVFKGVRR 60

Query: 61  RNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLP 120
           RN G+WVCEVREP+ K RIWLGTF TAEMAARAHDVAA+ALRGR+ACLNFADS   L +P
Sbjct: 61  RNPGRWVCEVREPHGKQRIWLGTFETAEMAARAHDVAALALRGRAACLNFADSPRRLRVP 120

Query: 121 PT-VDAKDIQKAAAEAAEAFRPPEPAPSAAAEAATAAE-------EVF-------YLDEE 180
           P      DI++AAAEAAEAFRPP    +AA E A AA        E F        +D+ 
Sbjct: 121 PIGASHDDIRRAAAEAAEAFRPPPDESNAATEVAAAASGATNSNAEQFASHPYYEVMDDG 180

Query: 181 AVFGMPGLLADMAEAMLLPPP--NCD--YGANSMDLDADMSLWSY 199
              GM G L DMA+ ML+ PP   CD   G    D D ++ LWSY
Sbjct: 181 LDLGMQGYL-DMAQGMLIDPPPMACDPAVGGGEDDNDGEVQLWSY 224

[Close]

BLAST of Spg024539 vs. ExPASy TrEMBL
Match: A0A0A0KRU7 (AP2/ERF domain-containing transcription factor OS=Cucumis sativus OX=3659 GN=Csa_5G174570 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.3e-76
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           MD SD+SSSSH       SDD++LLASRYPKKRAGRKKFKETRHP+YRGVR RNSGKWVC
Sbjct: 1   MDFSDASSSSHRSTL---SDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTL +P +VD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNC 180
           Q+AAAEAAEAFRP +         A   EE FYLDEE  FGMPGLL DMAEAMLLPPPNC
Sbjct: 121 QRAAAEAAEAFRPQDD----ELTPAVVEEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 -------DYGANSMDLDADMSLWSYSI 201
                   +GANSMD DADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 200

[Close]

BLAST of Spg024539 vs. ExPASy TrEMBL
Match: A0A1S3CT03 (dehydration-responsive element-binding protein 1D-like OS=Cucumis melo OX=3656 GN=LOC103504619 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.8e-76
Identity = 159/207 (76.81%), Postives = 170/207 (82.13%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           M++SD+SSSSH       SDD++LLASRYPKKRAGRKKFKETRHP+YRGVR RNSGKWVC
Sbjct: 1   MELSDASSSSHRSTL---SDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTL +P +VD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNC 180
           Q+AAAEAAEAFRPP+             EE FYLDEE  FGMPGLL DMAEAMLLPPPNC
Sbjct: 121 QRAAAEAAEAFRPPDDHEYL---RPAVVEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 -------DYGANSMDLDADMSLWSYSI 201
                   +GANSMD DADMSLWSYSI
Sbjct: 181 VGNYDNDHFGANSMDFDADMSLWSYSI 201

[Close]

BLAST of Spg024539 vs. ExPASy TrEMBL
Match: A0A5D3BMF3 (Dehydration-responsive element-binding protein 1D-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00300 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.1e-76
Identity = 158/207 (76.33%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVC 60
           M++SD+SSSSH       SDD++LLASRYPKKRAGRKKFKETRHP+YRGVR RNSGKWVC
Sbjct: 1   MELSDASSSSHRSTL---SDDELLLASRYPKKRAGRKKFKETRHPIYRGVRLRNSGKWVC 60

Query: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDI 120
           EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTL +P +VD KDI
Sbjct: 61  EVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLHIPASVDPKDI 120

Query: 121 QKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNC 180
           Q+AAAEAAEAFRPP+             EE FYLDEE  FGMPGLL DMAEAMLLPPPNC
Sbjct: 121 QRAAAEAAEAFRPPDDHEYL---RPAVVEEGFYLDEEVEFGMPGLLTDMAEAMLLPPPNC 180

Query: 181 -------DYGANSMDLDADMSLWSYSI 201
                   +G NSMD DADMSLWSYSI
Sbjct: 181 VGNYDNDHFGTNSMDFDADMSLWSYSI 201

[Close]

BLAST of Spg024539 vs. ExPASy TrEMBL
Match: A0A6J1K1Q2 (dehydration-responsive element-binding protein 1E-like OS=Cucurbita maxima OX=3661 GN=LOC111490925 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.3e-75
Identity = 158/210 (75.24%), Postives = 171/210 (81.43%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACR----SDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MD  D+SSSS+S+ F  R    SD+++LLASR+PKKRAGRKKFKETRHPVYRGVRRRNSG
Sbjct: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S LP P ++D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120

Query: 121 AKDIQKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLP 180
            KDIQ+AAAEAAEAFRPPE AP         AE++F  D +A   MPG LADMAEAMLLP
Sbjct: 121 PKDIQRAAAEAAEAFRPPETAP---------AEDMFCFDNDA---MPGFLADMAEAMLLP 180

Query: 181 PPNC------DYGANSMDLDADMSLWSYSI 201
           PPNC      DYG NSMD DADMSLWSYSI
Sbjct: 181 PPNCVATDHDDYGPNSMDFDADMSLWSYSI 198

[Close]

BLAST of Spg024539 vs. ExPASy TrEMBL
Match: A0A6J1H236 (dehydration-responsive element-binding protein 1E-like OS=Cucurbita moschata OX=3662 GN=LOC111459334 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 157/210 (74.76%), Postives = 170/210 (80.95%), Query Frame = 0


Query: 1   MDVSDSSSSSHSKLFACR----SDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSG 60
           MD  D+SSSS+S+ F  R    SD+++LLASR+PKKRAGRKKFKETRHPVYRGVRRRNSG
Sbjct: 1   MDFPDASSSSNSEFFTSRRSNFSDEELLLASRHPKKRAGRKKFKETRHPVYRGVRRRNSG 60

Query: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVD 120
           KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADS S LP P ++D
Sbjct: 61  KWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSVSALPRPASLD 120

Query: 121 AKDIQKAAAEAAEAFRPPEPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLP 180
            KDIQ+AAAEAAEAFRPPE AP         AE++F  D +    MPG LADMAEAMLLP
Sbjct: 121 PKDIQRAAAEAAEAFRPPETAP---------AEDMFCFDNDE---MPGFLADMAEAMLLP 180

Query: 181 PPNC------DYGANSMDLDADMSLWSYSI 201
           PPNC      DYG NSMD DADMSLWSYSI
Sbjct: 181 PPNCVATDHDDYGPNSMDFDADMSLWSYSI 198

[Close]

BLAST of Spg024539 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 216.5 bits (550), Expect = 2.0e-56
Identity = 124/209 (59.33%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 7   SSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPN 66
           S S H    +  S+    LAS  PKKRAGRKKF+ETRHP+YRGVR+RNSGKWVCEVREPN
Sbjct: 14  SISDHRSPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPN 73

Query: 67  KKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAE 126
           KK+RIWLGTFPT EMAARAHDVAA+ALRGRSACLNFADSA  L +P T   K+IQKAA+E
Sbjct: 74  KKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASE 133

Query: 127 AAEAFR--PPEPAPSAAAEAATAAEE---------------VFYLDEEAVFGMPGLLADM 186
           AA AF+          AAEA  AA E               VFY+D+EA+ GMP    +M
Sbjct: 134 AAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENM 193

Query: 187 AEAMLLPPPNCDYGANSMDLDADMSLWSY 199
           AE MLLPPP   +  N  D   D+SLWS+
Sbjct: 194 AEGMLLPPPEVGWNHNDFDGVGDVSLWSF 222

[Close]

BLAST of Spg024539 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 121/188 (64.36%), Postives = 135/188 (71.81%), Query Frame = 0


Query: 25  LASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 84
           LAS  PKK AGRKKF+ETRHP+YRGVRRRNSGKWVCEVREPNKKTRIWLGTF TAEMAAR
Sbjct: 29  LASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAAR 88

Query: 85  AHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAEAAEAFRPP---------- 144
           AHDVAA+ALRGRSACLNFADSA  L +P +  AKDIQKAAAEAA AF+            
Sbjct: 89  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGF 148

Query: 145 --EPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNCDYGANSM--DLD 199
             E     A   A  +E  FY+ +EA+F MP LLA+MAE MLLP P+  +  N      D
Sbjct: 149 DMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDD 208

[Close]

BLAST of Spg024539 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54
Identity = 119/188 (63.30%), Postives = 135/188 (71.81%), Query Frame = 0


Query: 25  LASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAAR 84
           LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWV EVREPNKKTRIWLGTF TAEMAAR
Sbjct: 26  LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAAR 85

Query: 85  AHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAEAAEAFRPP---------- 144
           AHDVAA+ALRGRSACLNFADSA  L +P +  AKDIQKAAAEAA AF+            
Sbjct: 86  AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG 145

Query: 145 ---EPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNCDYGAN-SMDLD 199
              E     A      +E  FY+DEE +FGMP LL +MAE MLLPPP+  +  N   + D
Sbjct: 146 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGD 205

[Close]

BLAST of Spg024539 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 201.8 bits (512), Expect = 5.1e-52
Identity = 118/209 (56.46%), Postives = 141/209 (67.46%), Query Frame = 0


Query: 4   SDSSSSSHSKLFACRSDDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVR 63
           S+   S +    +   D    LA+  PKK AGRKKF+ETRHP+YRGVR+RNSGKWVCE+R
Sbjct: 8   SEMFGSDYESPVSSGGDYSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELR 67

Query: 64  EPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKA 123
           EPNKKTRIWLGTF TAEMAARAHDVAAIALRGRSACLNFADSA  L +P +  AK+IQKA
Sbjct: 68  EPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKA 127

Query: 124 AAEAAEAFRPP-------------EPAPSAAAEAATAAEEVFYLDEEAVFGMPGLLADMA 183
           AAEAA  F+               E     A      +++ FY+DEEA+ GM  LL +MA
Sbjct: 128 AAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMA 187

Query: 184 EAMLLPPPNCDYGAN-SMDLDADMSLWSY 199
           E MLLP P+  +  N  ++ D D+SLWSY
Sbjct: 188 EGMLLPSPSVQWNYNFDVEGDDDVSLWSY 216

[Close]

BLAST of Spg024539 vs. TAIR 10
Match: AT1G63030.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 7.8e-45
Identity = 102/185 (55.14%), Postives = 126/185 (68.11%), Query Frame = 0


Query: 20  DDDILLASRYPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTA 79
           +DDI +A   PKKRAGR+ FKETRHP+YRGVRRR+  KWVCEVREP  + R+WLGT+PTA
Sbjct: 3   NDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRRDGDKWVCEVREPIHQRRVWLGTYPTA 62

Query: 80  EMAARAHDVAAIALRGRSACLNFADSASTLPLPPTVDAKDIQKAAAEAAEAFRPPEPAPS 139
           +MAARAHDVA +ALRGRSACLNF+DSA  LP+P + D   I++ AAEAAE FRPPE   S
Sbjct: 63  DMAARAHDVAVLALRGRSACLNFSDSAWRLPVPASTDPDTIRRTAAEAAEMFRPPE--FS 122

Query: 140 AAAEAATAAEEVFYLDEEAVFGMPGLLADMAEAMLLPPPNCDYGAN-SMDLD-----ADM 199
                  +A E    DE    G+ G++  +AE  L+ PP      N S+ +D      D+
Sbjct: 123 TGITVLPSASEFDTSDE----GVAGMMMRLAEEPLMSPPRSYIDMNTSVYVDEEMCYEDL 181

The following BLAST results are available for this feature:

BLAST of Spg024539 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907097.1	8.3e-81	78.87	dehydration-responsive element-binding protein 1D-like [Benincasa hispida]	[more]
XP_004143704.1	2.8e-76	77.29	dehydration-responsive element-binding protein 1B [Cucumis sativus] >KGN50431.1 ...	[more]
XP_008467214.1	3.6e-76	76.81	PREDICTED: dehydration-responsive element-binding protein 1D-like [Cucumis melo]	[more]
TYK00288.1	1.1e-75	76.33	dehydration-responsive element-binding protein 1D-like [Cucumis melo var. makuwa...	[more]
XP_022995351.1	6.8e-75	75.24	dehydration-responsive element-binding protein 1E-like [Cucurbita maxima]	[more]

BLAST of Spg024539 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ93	2.8e-55	59.33	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
Q9M0L0	1.5e-53	64.36	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
P93835	2.6e-53	63.30	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	7.1e-51	56.46	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
A2X899	6.9e-46	53.78	Dehydration-responsive element-binding protein 1G OS=Oryza sativa subsp. indica ...	[more]

BLAST of Spg024539 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRU7	1.3e-76	77.29	AP2/ERF domain-containing transcription factor OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A1S3CT03	1.8e-76	76.81	dehydration-responsive element-binding protein 1D-like OS=Cucumis melo OX=3656 G...	[more]
A0A5D3BMF3	5.1e-76	76.33	Dehydration-responsive element-binding protein 1D-like OS=Cucumis melo var. maku...	[more]
A0A6J1K1Q2	3.3e-75	75.24	dehydration-responsive element-binding protein 1E-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1H236	1.3e-74	74.76	dehydration-responsive element-binding protein 1E-like OS=Cucurbita moschata OX=...	[more]

BLAST of Spg024539 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51990.1	2.0e-56	59.33	C-repeat-binding factor 4	[more]
AT4G25480.1	1.1e-54	64.36	dehydration response element B1A	[more]
AT4G25490.1	1.9e-54	63.30	C-repeat/DRE binding factor 1	[more]
AT4G25470.1	5.1e-52	56.46	C-repeat/DRE binding factor 2	[more]
AT1G63030.1	7.8e-45	55.14	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 47..58 score: 66.06 coord: 69..85 score: 71.02
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 46..109 e-value: 2.9E-32 score: 123.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 45..95 e-value: 9.0E-16 score: 57.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 46..103 score: 22.760784
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 47..105 e-value: 4.08249E-33 score: 111.209
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 46..104 e-value: 3.8E-24 score: 86.6
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 4..200
None	No IPR available	PANTHER	PTHR31839:SF53	AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR	coord: 4..200
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 46..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024539.1	Spg024539.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity