Spg024475 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024475
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Locationscaffold12: 17132244 .. 17134958 (-)
RNA-Seq ExpressionSpg024475
SyntenySpg024475
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAATCCCGACCGGGATTTCTTGGTCAAACGACCGGGATTTCCTGGTCGGGAAATCCACCAGGAAATTTTCCAGATTTTGTTTTTTCCTTTATTCCTTTGATTTTTCTTTCCTTCTTTTACAAAAGTTGTTTTTTTCTAATGAATCTTGTATATATATATATATCTTGCAGAATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGTCGTTATACTTATCAATGATTCCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCTGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGAAAGATGTTGCTCCTCTTGCTTCTAGAATGGAAGGTGCTTCTAGCCAGCAATTGATCACATCAGGTCAGTGTTCATATTCTACTGGTGATGTTGAACTTGGACAACTATATGATTGTAAAGAAGAATTGAAAACGAGGTTGTCTGTAATGGCCATGAAGAAAAATTTTGAGTTTAGGGTTAAGAAATCCACGAAGTCTTTGTTTGTGGTGAAATGTATAATCGAATCTTGCAAATGGAAAGTTAGAGCTATAAAACCAAAGGGTTATGACGTATTCAAGATCTCGAAATATTATAATGTCCATACATGCTCCCATGAATTACTAAATCACCACCATAGACAAGCGAAGAGTCGGGTGGTAGGGCATTTGATTAAGTCGAAATTTGAGGATGTAAGACGAATTTACAAGCTGAATGACATTATACAGGACATGCGAAAAGACTACGGGGTCACTATTAGTTATGAGAAAGCATGGCGGGCTAGAGAGGAGACACTAGCTTTTGTTAGAGGATCACCAGAAGAGTCATTTGGTCACTTACATACATATGGTGAAGCGCTGAAGATCATGAACCCTGGGACCGTATATGATATAAAGCTCGAGGATGGAAAGTATTTTAAATATGTGTTCATGGCACTAGGTCAGTGCATTAGGGGGTTTATTCAATACATTAGGCCAGTCATTATAGTTGATGGCGCGCACCTAAAGGGAAAGTTCGGAGGTTGGCTTCTAATTGCGGCTGGAGTGGATGGAAACAATCAAATATACCGCATTGCATTCGGAGTTGTTGATGGTGAGACAGATGATGCGTGGCAGTGGTTCTTTGAGAGAGTTAAACGTTCTATTGGAGATCCCACTGGATTGGTTATAGTATCAGATCGAAAGTCCAGTATTGGCAAGGCAATTAGAACAGTGTATCCATCTGCATTTCATTGTGTTTTGCATACACCATTTATCTATGAACCTCACGAAGAATTTTAAGTGCGAAGGTGCAATACCTTTCTTTTTTCTTGCTGCAAAAGCATGTCGAGAGTCGGAGTTTCAAAACATGTTTGCTAAACTTCGTCCATTCAGTGGTGTTGCTAAGTACTTGGAAGAATTGGGTTTCCCACGTTGGGCTCGGGCTTTTCAGTGTGGACGAAGATACAATCAGATGACAACTAATGTGGCCGAAAGTATGAATGCAACATTGGTACATGCTCGAACCTTGCCTGTGACGAAGATGTTGGACAATATACGAGGCATGCTTCAAAGTTGGTTTTATAAGCGTCGGACACATGCCTCTAACCGATCTTCGAGGTTATCAGAGTACGCAGAGAACCTATTGATGGAGGCCGAGAAGAAGTCTCGAAGGCATAATGTGGACCCGATTGATTGCTACCAATATCAAGTATACGAAGGACAACTAGACTTTCGTGTCGACTTGCACCTGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGTCACTCTTTGTTCCCCCGCATATCACACAGAATCTGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAAAACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

mRNA sequence

ATGATGAATCCCGACCGGGATTTCTTGGTCAAACGACCGGGATTTCCTGGTCGGGAAATCCACCAGGAAATTTTCCAGATTTTAATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGTCGTTATACTTATCAATGATTCCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCTGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGAAAGATGTTGCTCCTCTTGCTTCTAGAATGGAAGTATACGAAGGACAACTAGACTTTCGTGTCGACTTGCACCTGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGTCACTCTTTGTTCCCCCGCATATCACACAGAATCTGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAAAACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Coding sequence (CDS)

ATGATGAATCCCGACCGGGATTTCTTGGTCAAACGACCGGGATTTCCTGGTCGGGAAATCCACCAGGAAATTTTCCAGATTTTAATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTTAAGAGAGCTGTATAACGTGAGTGACATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGTCGTTATACTTATCAATGATTCCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCTGAAAACATACCATCATCCATTCCCTCGTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGAAAGATGTTGCTCCTCTTGCTTCTAGAATGGAAGTATACGAAGGACAACTAGACTTTCGTGTCGACTTGCACCTGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGATTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGTCACTCTTTGTTCCCCCGCATATCACACAGAATCTGTGATCCTATCATACGCAGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAAAACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA

Protein sequence

MMNPDRDFLVKRPGFPGREIHQEIFQILMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSDINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLSLYLSMIPKDVHGSGSNLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDENWEYNEEDEELDESYEEESEADEFEEVDGVEADGGTDGGNEVEKDVAPLASRMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRCGNIGHNRKTCREPLSTT
Homology
[Close]
BLAST of Spg024475 vs. NCBI nr
Match: XP_022155156.1 (uncharacterized protein LOC111022299 [Momordica charantia])

HSP 1 Score: 169.1 bits (427), Expect = 8.2e-38
Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 286 EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILS 345
           EV++G    RV+L+ ++CTC++F+YY+IPCSHA+ A   RNV++ TLCSP Y  E+++ +
Sbjct: 146 EVHDGNSKVRVNLNSKSCTCKQFDYYQIPCSHAVVATMHRNVSIYTLCSPKYKLETLLNT 205

Query: 346 YAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRC 405
           YAEPIYP+G   +W  P +F E  I PPK VARVGRR+TVRIPSAGE    QQ+HK  RC
Sbjct: 206 YAEPIYPLGDEEDWPLPDDFVEYTIEPPKFVARVGRRQTVRIPSAGE---PQQIHKYSRC 265

Query: 406 GNIGHNRKTCREPLSTT 423
           G   HNRKTCR+PL TT
Sbjct: 266 GMQVHNRKTCRQPLRTT 279

[Close]
BLAST of Spg024475 vs. NCBI nr
Match: XP_022156830.1 (uncharacterized protein LOC111023664 [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 2.4e-37
Identity = 77/138 (55.80%), Postives = 103/138 (74.64%), Query Frame = 0 

Query: 284 RMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVI 343
           ++EV +G    RV+L+ RTC C+EF+Y++ PCSHAIAA    NVN  TLCSPAY  +++I
Sbjct: 77  KLEVSDGLKRVRVNLNARTCECKEFDYFQFPCSHAIAATTYWNVNRYTLCSPAYTIQTLI 136

Query: 344 LSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCG 403
            +Y EP+YP+G   +W  P +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG
Sbjct: 137 NTYVEPVYPLGDKDDWILPDDFVDRIVEPPRYVSRVGRRQTIRIPSAGE---TRQVHKCG 196

Query: 404 RCGNIGHNRKTCREPLST 422
            CGN+GHNRKTCR+PL T
Sbjct: 197 WCGNMGHNRKTCRQPLRT 211

[Close]
BLAST of Spg024475 vs. NCBI nr
Match: XP_022159268.1 (uncharacterized protein LOC111025678 [Momordica charantia])

HSP 1 Score: 165.6 bits (418), Expect = 9.1e-37
Identity = 81/136 (59.56%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 286 EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILS 345
           +V +G LD  VDL+   C+CREF+Y++IPCSHAIAAA  RN+N  +LC  AY T S IL+
Sbjct: 380 QVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILA 439

Query: 346 YAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRC 405
           YAEPI+PVG +S W    EF  + + PPK V RVGRR+TVRIPS GE    +Q  KCGRC
Sbjct: 440 YAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGRRKTVRIPSTGE---VRQTRKCGRC 499

Query: 406 GNIGHNRKTCREPLST 422
           G  GHNRKTC EPL+T
Sbjct: 500 GAWGHNRKTCSEPLTT 512

[Close]
BLAST of Spg024475 vs. NCBI nr
Match: XP_022153251.1 (uncharacterized protein LOC111020787 [Momordica charantia])

HSP 1 Score: 163.3 bits (412), Expect = 4.5e-36
Identity = 76/137 (55.47%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 285 MEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVIL 344
           +EV +G    RV+L+ RTC C+EF+Y+++PCSHAIA A  R VN  TLCSPAY  +++I 
Sbjct: 332 LEVIDGLKRVRVNLNARTCGCKEFDYFQLPCSHAIAVATYRKVNRYTLCSPAYTLQTLIN 391

Query: 345 SYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGR 404
           +YA+ +YP+G   +W  P +F +  +  P+ V R+GRR+TVRIPSAGE    +QVHKCGR
Sbjct: 392 AYAKHVYPLGDEEDWILPDDFVDRIVETPRYVPRIGRRQTVRIPSAGE---TRQVHKCGR 451

Query: 405 CGNIGHNRKTCREPLST 422
           CGN+GHNRKTCR+PL T
Sbjct: 452 CGNMGHNRKTCRQPLRT 465

[Close]
BLAST of Spg024475 vs. NCBI nr
Match: XP_022154610.1 (uncharacterized protein LOC111021833 [Momordica charantia])

HSP 1 Score: 162.5 bits (410), Expect = 7.7e-36
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 0 

Query: 286 EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILS 345
           +V +G  D  VDL+  TC+CREF+Y++IPCSH IAAA  RN+N  +LC  AY T S IL+
Sbjct: 191 QVRDGNFDGIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILA 250

Query: 346 YAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRC 405
           YAEPI+PVG +S W    EF  + + PPK V RVGRR T RIPS GE    +Q  KCGRC
Sbjct: 251 YAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGRRNTTRIPSTGE---VRQTRKCGRC 310

Query: 406 GNIGHNRKTCREPLST 422
           G  GHNRKTC EPL+T
Sbjct: 311 GAWGHNRKTCSEPLTT 323

[Close]
BLAST of Spg024475 vs. ExPASy TrEMBL
Match: A0A6J1DQV1 (uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022299 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.0e-38
Identity = 79/137 (57.66%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 286 EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILS 345
           EV++G    RV+L+ ++CTC++F+YY+IPCSHA+ A   RNV++ TLCSP Y  E+++ +
Sbjct: 146 EVHDGNSKVRVNLNSKSCTCKQFDYYQIPCSHAVVATMHRNVSIYTLCSPKYKLETLLNT 205

Query: 346 YAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRC 405
           YAEPIYP+G   +W  P +F E  I PPK VARVGRR+TVRIPSAGE    QQ+HK  RC
Sbjct: 206 YAEPIYPLGDEEDWPLPDDFVEYTIEPPKFVARVGRRQTVRIPSAGE---PQQIHKYSRC 265

Query: 406 GNIGHNRKTCREPLSTT 423
           G   HNRKTCR+PL TT
Sbjct: 266 GMQVHNRKTCRQPLRTT 279

[Close]
BLAST of Spg024475 vs. ExPASy TrEMBL
Match: A0A6J1DRF6 (uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023664 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-37
Identity = 77/138 (55.80%), Postives = 103/138 (74.64%), Query Frame = 0 

Query: 284 RMEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVI 343
           ++EV +G    RV+L+ RTC C+EF+Y++ PCSHAIAA    NVN  TLCSPAY  +++I
Sbjct: 77  KLEVSDGLKRVRVNLNARTCECKEFDYFQFPCSHAIAATTYWNVNRYTLCSPAYTIQTLI 136

Query: 344 LSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCG 403
            +Y EP+YP+G   +W  P +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG
Sbjct: 137 NTYVEPVYPLGDKDDWILPDDFVDRIVEPPRYVSRVGRRQTIRIPSAGE---TRQVHKCG 196

Query: 404 RCGNIGHNRKTCREPLST 422
            CGN+GHNRKTCR+PL T
Sbjct: 197 WCGNMGHNRKTCRQPLRT 211

[Close]
BLAST of Spg024475 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.4e-37
Identity = 81/136 (59.56%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 286 EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILS 345
           +V +G LD  VDL+   C+CREF+Y++IPCSHAIAAA  RN+N  +LC  AY T S IL+
Sbjct: 380 QVRDGNLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILA 439

Query: 346 YAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRC 405
           YAEPI+PVG +S W    EF  + + PPK V RVGRR+TVRIPS GE    +Q  KCGRC
Sbjct: 440 YAEPIFPVGHISTWNSSPEFVNIPVEPPKTVPRVGRRKTVRIPSTGE---VRQTRKCGRC 499

Query: 406 GNIGHNRKTCREPLST 422
           G  GHNRKTC EPL+T
Sbjct: 500 GAWGHNRKTCSEPLTT 512

[Close]
BLAST of Spg024475 vs. ExPASy TrEMBL
Match: A0A6J1DK28 (uncharacterized protein LOC111020787 OS=Momordica charantia OX=3673 GN=LOC111020787 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-36
Identity = 76/137 (55.47%), Postives = 102/137 (74.45%), Query Frame = 0 

Query: 285 MEVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVIL 344
           +EV +G    RV+L+ RTC C+EF+Y+++PCSHAIA A  R VN  TLCSPAY  +++I 
Sbjct: 332 LEVIDGLKRVRVNLNARTCGCKEFDYFQLPCSHAIAVATYRKVNRYTLCSPAYTLQTLIN 391

Query: 345 SYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGR 404
           +YA+ +YP+G   +W  P +F +  +  P+ V R+GRR+TVRIPSAGE    +QVHKCGR
Sbjct: 392 AYAKHVYPLGDEEDWILPDDFVDRIVETPRYVPRIGRRQTVRIPSAGE---TRQVHKCGR 451

Query: 405 CGNIGHNRKTCREPLST 422
           CGN+GHNRKTCR+PL T
Sbjct: 452 CGNMGHNRKTCRQPLRT 465

[Close]
BLAST of Spg024475 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.7e-36
Identity = 79/136 (58.09%), Postives = 95/136 (69.85%), Query Frame = 0 

Query: 286 EVYEGQLDFRVDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILS 345
           +V +G  D  VDL+  TC+CREF+Y++IPCSH IAAA  RN+N  +LC  AY T S IL+
Sbjct: 191 QVRDGNFDGIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILA 250

Query: 346 YAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQKQQVHKCGRC 405
           YAEPI+PVG +S W    EF  + + PPK V RVGRR T RIPS GE    +Q  KCGRC
Sbjct: 251 YAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGRRNTTRIPSTGE---VRQTRKCGRC 310

Query: 406 GNIGHNRKTCREPLST 422
           G  GHNRKTC EPL+T
Sbjct: 311 GAWGHNRKTCSEPLTT 323

[Close]
BLAST of Spg024475 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-07
Identity = 25/80 (31.25%), Postives = 40/80 (50.00%), Query Frame = 0 

Query: 296 VDLHLRTCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGP 355
           V L++ TCTCR+F+ Y+ PC HA+A      +N +      Y  E    +YA    PV  
Sbjct: 636 VQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPD 695

Query: 356 MSEWKRPAEFQEMEILPPKR 376
           ++ W  P + +   + PP +
Sbjct: 696 VAAW--PEDCRVPTLFPPSQ 713

[Close]
BLAST of Spg024475 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 43.5 bits (101), Expect = 4.9e-04
Identity = 23/72 (31.94%), Postives = 33/72 (45.83%), Query Frame = 0 

Query: 302 TCTCREFEYYEIPCSHAIAAARDRNVNVVTLCSPAYHTESVILSYAEPIYPVGPMSEWKR 361
           +CTC +F+ Y+ PC HA+A  +    N +      Y  E +  +YA     V  MS W  
Sbjct: 651 SCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAW-- 710

Query: 362 PAEFQEMEILPP 374
           P       +LPP
Sbjct: 711 PEASGVPRLLPP 720

The following BLAST results are available for this feature:
BLAST of Spg024475 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155156.18.2e-3857.66uncharacterized protein LOC111022299 [Momordica charantia][more]
XP_022156830.12.4e-3755.80uncharacterized protein LOC111023664 [Momordica charantia][more]
XP_022159268.19.1e-3759.56uncharacterized protein LOC111025678 [Momordica charantia][more]
XP_022153251.14.5e-3655.47uncharacterized protein LOC111020787 [Momordica charantia][more]
XP_022154610.17.7e-3658.09uncharacterized protein LOC111021833 [Momordica charantia][more]
BLAST of Spg024475 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg024475 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DQV14.0e-3857.66uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DRF61.2e-3755.80uncharacterized protein LOC111023664 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DYC44.4e-3759.56uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DK282.2e-3655.47uncharacterized protein LOC111020787 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DK353.7e-3658.09uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
BLAST of Spg024475 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64260.14.7e-0731.25MuDR family transposase [more]
AT1G64255.14.9e-0431.94MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 219..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..274
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 301..328
e-value: 8.9E-12
score: 55.1
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 294..323
e-value: 1.9E-8
score: 33.8
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 294..326
score: 10.79355
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 401..417
score: 8.614303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024475.1Spg024475.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding