Spg024464 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024464
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	GLTSCR1 domain-containing protein
Location	scaffold12: 17159789 .. 17163224 (-)
RNA-Seq Expression	Spg024464
Synteny	Spg024464

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGAATCCCTCCGTTGATTAGTAAAAGCTTGGAGAAGACAATGACGGATTTCTTTTGGGAGGGGGACAGTCTCACTTGATTAGATAGGAGATGGTCTCTGGACTTTTGGAGTTTGGGGGTTTGAGTAATAGGTAGCTTAAGATAGAGGAATGAGACCTTGGTGGCCAAATGGTTGTGGCATTTCTTTAGGAAGCCGAAGGATTTGTGGCGCCAGAGTTATTGTGAGCATATACTGCCCCCACCCTTTTGAGTGGGTCTCTGTGCCTATCCTTCTCTCTTTTGTACCATCTTTTGGATATGAAGCTCAAGCTTGGGGCATCTGTTTTGTTTCCTTCAAGTGGGTCTGTTTCTTCTTCGTCTTTTGATTTCGTACTGTTGCCCTCTCACGAATAGGGAGTTTTTGGAGGCTATCTCTTTGCTCTTGCTTTTGAGGGGCTCCTTTGTCATTCAAGGTAGGAAGGATTCTTGCTTTTGGGCCCCTTCTCCCTCCCAAGTCTCAAGGTTTTTCTTCCGGTTCTCTCTTCTCTCTTCTAAGGCCAAGACTCAAAGTTTTTCTCTCTCCATTCACCCCTTCATTTTCTTTGCTCTGGAAGTTTAAGGTCCCCAAGAAGGTTAGTTTCTTTGTGCTTGGCAGGTTTAGTATTGAAAAGTTATCACTAAATTGCATGTAGACACTCTTCTTTTCGAATCCCCGTGGTTGTAGAGGTGCATCAAAGAATCTTGACCATATCCGTTGATGTCTCCATTATGCTCAATCAATATGGTACAGATTCCGGATGTGTTTGGAGTCTCGTTGGCGTGGAGTAAAGATTATAGGGATTTGGTGGTTGAGGTTTCGTTGTTTCCCTTGGAAAGTGCAGAATTCCTTAGCAGGCTTGCTTCTTTGCCATTATTTAAGGGATTTGGCTTCGGAGGAATGGTAGGCTAAGTGTTGTGAGATTTGAGGAGTTGTGGGAGTTATTTAGGTTTAATGCCTTATTATGGACTTCGGTGGTTAAGGGTTTGTAATTTTCAGCTAGATCCAATTCTTTTAAGATTGGAGCCCCTTCTTGCAGCTCTTTAGGCGTTTTTTCTTTTTTTTTTTTTTGGTGGGGCTCTTTTTGTGGAGCTGTTATTTTTCTCTGTCCTTGTACATTCTTTTATTTCTCTCAATTAAAGTTTGGTTTCTTATAAATAAAATGTCAGAAGTTCTACAGAGAGAGTTTTGGTTCAACCCAGTATTTCTTCTACTTGGTTCTCTATCAAGATCCTGTTTTTTTTCCTAATTATAGCATTTCCTCAATTGTATCCAATTGGATTTTCTTGTAGTGCTGTCCCTCTCTCTTGGCTTGGCTTGGCTTGGTTAGTCCTTTTGTATATTTCATTTTAACAATGGAGTAATTCTTTTTTCTTATCTTTTTTTTTAAGATAGGTTTAACGGGTAAGATCTTTAACCTAGAAGTATCAGAAGTGTTTTTCTCCCTTCTCTTTCTACCATTTCCCTTTCTACCTCTTTTTATTTTCTCTGCTGAGTTACGAACTTACAATATTACTTGTTATTGTGGAGTTGAATCTTTCTTGCAACCTGTGCTGTATTTTGTTACACTTTCCTGCTTTTTGCTGTTCTTTTGTGTGGCATGAAATGCTTTTTCTAATTTGCCCGTTAGGTGGTGGTTATTTATAATTCTGAGAAGAACTTCAGCCATCTCTTTATGAGATGTTGGGGTGCCAATAGACGTCTGCAATTTCTTTTTATTATTTTTATTTTGTTTAAGGTTGGTGGGGTTTAAAATTACTGTGAATACTTTGGAGTTTGGGGTTTAAAATTAGTGGGCTGGGGGTGATATTGGAAACTGATCTCCTTTTATTATTAATACTGTTACACTCATAATATGGTTCTTCAGTGTATAGTTAAAATATCATAAAGCTATATATAGTACAAAATTTCTCTCTTAATTCTCTATGGTTGATCTTCTCAGTTTATACACTGAAATGTAGAAAGAATTACAATCGACATACTACCTAAAATTAACTTTTTGTTGATAGCTATAATAAATACAGGTCAAACCGTTTTCAATTTAAAATAGTTCCATCTTTTCGTATTCCTTCTATTGCTTGGTTATTTGTATGAGCGTGAAAGAGCACTGGATAGGTCGAAGAGTTGAGAGTTGTTATCTTTCATAGTCACTGTTCTTCCATATTCTTTTTGTTCTTGTCTTTCCTTATCATAATTTAATGATTCATTGATGCATTATGCAAAAAATATTGTTCAGGCTGCTGCCATATCATGTGGTGGCTGACTATGAGGCCGAAGAAGATGATAGAATCCTGGACTCTGATCCAACCGGCCAAATGCTGTCACGCTCACAGCAGTGGGACCACAACATCTCGGCCAAAATTTCTGAATTTATTGCCACTTTCGAGAAGCAAGTATTGGCCTTTAACATCATAACTCGCAAAAGAGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGAAACCTTCTGGAACTAAAAGCTGAGATTGAATTGAGAGGGAAGGCTGGCAAAGAAGCTCATGACGCCAAAACACGGATGGCAGCAATGATGCAGACCGACCAAACAAGGGCTGAACCACAGGCTAATGAAATGATGGTTCGACCTCCTATGAGAACAGCTGCACATGTTGGGTCCCAAAGTGGCGGCGATGTTCCAGTTGGCCATGGCATTGGAGAGCAGGAGCAAGTTCATCCAAGTGAAATGATCAATGGATGGGGAAACAACAATACACAGGGAGATGAGAAGGAAGGATCGGAGGACCTATTGAATGACGAGGAGGCTGAGAATGGTGATACGGGCATGCACGATAGTTGGCGCGAAGTTGGGGAATTTGATCTGAATTCGAGATGAAATGTTGGTGGAACAGCTTAACAATGGAGTTCCAAGTGAAGTTGGGTTCGATGAAGAAAAATTCCAATCAATGAGGGTTGCTTGGTCAACTCATGAAGAAGAGATGTGCTTGCGTATTTGAGGAACAACATTCGAAAGCCGAATCGTCAGTTGAACTGGAGGACGGATACGTTGAAACTCTGAGTAGGAAATACATGTATTACTGTATGGTGATAAAATTACTACAATTTCCAAAAGGGAATATCCTTGGTCTAAAAGCTGTATGATGTGTTAAATAGAATATTGAAAGGAAGAAATTGACGAGGAAACTTCCAAATGGGTGAACTTCACTCGACATTTGACATCCACAAAACAACTGTTCAAGAATTGCCAATCACATTTGAGATGTTTCATAGGCGAAATGCAATATCAACCACACGAACATGAATGCTAACAATGCTGGTTTGTTTATATCTATATATATATAAACAAAGTATATTTGAAGATTAAAACATTTATATGAATTTCTGTATTTTATAAAATACCATTTG

mRNA sequence

ATGTTTAGAATCCCTCCGTTGATTAGTAAAAGCTTGGAGAAGACAATGACGGATTTCTTTTGGGAGGGGGACAGAAGCCGAAGGATTTGTGGCGCCAGAGTTATTGTGAGCATATACTGCCCCCACCCTTTTGAGTGGGTCTCTGTGCCTATCCTTCTCTCTTTTGTACCATCTTTTGGATATGAAGCTCAAGCTTGGGGCATCTGTTTTGTTTCCTTCAAGTGGGTAGGAAGGATTCTTGCTTTTGGGCCCCTTCTCCCTCCCAAGTCTCAAGGTTTTTCTTCCGGTTCTCTCTTCTCTCTTCTAAGGCCAAGACTCAAAGTTTTTCTCTCTCCATTCACCCCTTCATTTTCTTTGCTCTGGAAGTTTAAGGTCCCCAAGAAGATTCCGGATGTGTTTGGAGTCTCGTTGGCGTGGAGTAAAGATTATAGGGATTTGGTGGTTGAGGTTTCGTTGTTTCCCTTGGAAAGTGCAGAATTCCTTAGCAGGCTTGCTTCTTTGCCATTATTTAAGGGATTTGGCTTCGGAGGAATGATCCTGTTTTTTTTCCTAATTATAGCATTTCCTCAATTGTATCCAATTGGATTTTCTTGTAGTGCTGTCCCTCTCTCTTGGCTTGGCTTGGCTTGGCTGCTGCCATATCATGTGGTGGCTGACTATGAGGCCGAAGAAGATGATAGAATCCTGGACTCTGATCCAACCGGCCAAATGCTGTCACGCTCACAGCAGTGGGACCACAACATCTCGGCCAAAATTTCTGAATTTATTGCCACTTTCGAGAAGCAAGTATTGGCCTTTAACATCATAACTCGCAAAAGAGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGAAACCTTCTGGAACTAAAAGCTGAGATTGAATTGAGAGGGAAGGCTGGCAAAGAAGCTCATGACGCCAAAACACGGATGGCAGCAATGATGCAGACCGACCAAACAAGGGCTGAACCACAGGCTAATGAAATGATGGTTCGACCTCCTATGAGAACAGCTGCACATGTTGGGTCCCAAAGTGGCGGCGATGTTCCAGTTGGCCATGGCATTGGAGAGCAGGAGCAAGTTCATCCAAGTGAAATGATCAATGGATGGGGAAACAACAATACACAGGGAGATGAGAAGGAAGGATCGGAGGACCTATTGAATGACGAGGAGGCTGAGAATGGTGATACGGGCATGCACGATAGTTGGCGCGAAGTTGGGGAATTTGATCTGAATTCGAGATGA

Coding sequence (CDS)

ATGTTTAGAATCCCTCCGTTGATTAGTAAAAGCTTGGAGAAGACAATGACGGATTTCTTTTGGGAGGGGGACAGAAGCCGAAGGATTTGTGGCGCCAGAGTTATTGTGAGCATATACTGCCCCCACCCTTTTGAGTGGGTCTCTGTGCCTATCCTTCTCTCTTTTGTACCATCTTTTGGATATGAAGCTCAAGCTTGGGGCATCTGTTTTGTTTCCTTCAAGTGGGTAGGAAGGATTCTTGCTTTTGGGCCCCTTCTCCCTCCCAAGTCTCAAGGTTTTTCTTCCGGTTCTCTCTTCTCTCTTCTAAGGCCAAGACTCAAAGTTTTTCTCTCTCCATTCACCCCTTCATTTTCTTTGCTCTGGAAGTTTAAGGTCCCCAAGAAGATTCCGGATGTGTTTGGAGTCTCGTTGGCGTGGAGTAAAGATTATAGGGATTTGGTGGTTGAGGTTTCGTTGTTTCCCTTGGAAAGTGCAGAATTCCTTAGCAGGCTTGCTTCTTTGCCATTATTTAAGGGATTTGGCTTCGGAGGAATGATCCTGTTTTTTTTCCTAATTATAGCATTTCCTCAATTGTATCCAATTGGATTTTCTTGTAGTGCTGTCCCTCTCTCTTGGCTTGGCTTGGCTTGGCTGCTGCCATATCATGTGGTGGCTGACTATGAGGCCGAAGAAGATGATAGAATCCTGGACTCTGATCCAACCGGCCAAATGCTGTCACGCTCACAGCAGTGGGACCACAACATCTCGGCCAAAATTTCTGAATTTATTGCCACTTTCGAGAAGCAAGTATTGGCCTTTAACATCATAACTCGCAAAAGAGCATTGGGGGAGTTCCGTTCAGAAGAAAGATTGATGTTTGAACAAGCCCTTATGCAAGAAGAGAAACGAAACCTTCTGGAACTAAAAGCTGAGATTGAATTGAGAGGGAAGGCTGGCAAAGAAGCTCATGACGCCAAAACACGGATGGCAGCAATGATGCAGACCGACCAAACAAGGGCTGAACCACAGGCTAATGAAATGATGGTTCGACCTCCTATGAGAACAGCTGCACATGTTGGGTCCCAAAGTGGCGGCGATGTTCCAGTTGGCCATGGCATTGGAGAGCAGGAGCAAGTTCATCCAAGTGAAATGATCAATGGATGGGGAAACAACAATACACAGGGAGATGAGAAGGAAGGATCGGAGGACCTATTGAATGACGAGGAGGCTGAGAATGGTGATACGGGCATGCACGATAGTTGGCGCGAAGTTGGGGAATTTGATCTGAATTCGAGATGA

Protein sequence

MFRIPPLISKSLEKTMTDFFWEGDRSRRICGARVIVSIYCPHPFEWVSVPILLSFVPSFGYEAQAWGICFVSFKWVGRILAFGPLLPPKSQGFSSGSLFSLLRPRLKVFLSPFTPSFSLLWKFKVPKKIPDVFGVSLAWSKDYRDLVVEVSLFPLESAEFLSRLASLPLFKGFGFGGMILFFFLIIAFPQLYPIGFSCSAVPLSWLGLAWLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQTRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDEKEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR

Homology

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BLAST of Spg024464 vs. NCBI nr
Match: XP_038887907.1 (involucrin [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 7.4e-103
Identity = 204/215 (94.88%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 161 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 220

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKA KEAHDAKTRMAAMMQTDQ
Sbjct: 221 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKASKEAHDAKTRMAAMMQTDQ 280

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR+EPQANEMMVR  MRT AHVGSQS  DVPVGHG GEQEQVHP+EMINGWG NNTQGDE
Sbjct: 281 TRSEPQANEMMVRASMRTGAHVGSQS-SDVPVGHGGGEQEQVHPNEMINGWG-NNTQGDE 340

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLNSR
Sbjct: 341 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 373

[Close]

BLAST of Spg024464 vs. NCBI nr
Match: KAG6571746.1 (hypothetical protein SDJN03_28474, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.8 bits (987), Expect = 9.6e-103
Identity = 201/215 (93.49%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 169 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 228

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA KEA DAKTRMAAMMQTDQ
Sbjct: 229 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQTDQ 288

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR E QANEMMVR PMRT AHVGSQS  DVPVGHG+GEQEQVHPSEMINGWGNN TQGDE
Sbjct: 289 TRGETQANEMMVRAPMRTGAHVGSQS-SDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDE 348

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 349 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 382

[Close]

BLAST of Spg024464 vs. NCBI nr
Match: XP_023554795.1 (PH domain-containing protein DDB_G0275795-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 9.6e-103
Identity = 201/215 (93.49%), Postives = 203/215 (94.42%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 173 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 232

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA KEA DAKTRMAAMMQTDQ
Sbjct: 233 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQTDQ 292

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR E QANEMMVR PMRT AHVGSQS  DVPVGHG+GEQEQVHPSEMINGWGNN TQGDE
Sbjct: 293 TRGETQANEMMVRAPMRTGAHVGSQS-SDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDE 352

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 353 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 386

[Close]

BLAST of Spg024464 vs. NCBI nr
Match: XP_022973214.1 (ras-interacting protein RIP3 [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 4.8e-102
Identity = 200/215 (93.02%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 163 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 222

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA KEA DAKTRMAAMMQ DQ
Sbjct: 223 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQPDQ 282

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR E QANEMMVR PMRT AHVGSQS  DVPVGHG+GEQEQVHPSEMINGWGNN TQGDE
Sbjct: 283 TRGETQANEMMVRAPMRTGAHVGSQS-SDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDE 342

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 343 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 376

[Close]

BLAST of Spg024464 vs. NCBI nr
Match: XP_022932951.1 (PH domain-containing protein DDB_G0275795-like [Cucurbita moschata])

HSP 1 Score: 381.7 bits (979), Expect = 8.2e-102
Identity = 200/215 (93.02%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 169 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 228

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA KEA DAKTRMAAMMQTDQ
Sbjct: 229 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQTDQ 288

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR E QANEMMVR PMRT AHVGSQS  DVPVGHG+GEQEQVHPSEMINGW NN TQGDE
Sbjct: 289 TRGETQANEMMVRAPMRTGAHVGSQS-SDVPVGHGVGEQEQVHPSEMINGWRNNTTQGDE 348

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 349 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 382

[Close]

BLAST of Spg024464 vs. ExPASy TrEMBL
Match: A0A6J1IDW9 (ras-interacting protein RIP3 OS=Cucurbita maxima OX=3661 GN=LOC111471787 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 2.3e-102
Identity = 200/215 (93.02%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 163 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 222

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA KEA DAKTRMAAMMQ DQ
Sbjct: 223 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQPDQ 282

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR E QANEMMVR PMRT AHVGSQS  DVPVGHG+GEQEQVHPSEMINGWGNN TQGDE
Sbjct: 283 TRGETQANEMMVRAPMRTGAHVGSQS-SDVPVGHGVGEQEQVHPSEMINGWGNNTTQGDE 342

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 343 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 376

[Close]

BLAST of Spg024464 vs. ExPASy TrEMBL
Match: A0A6J1EXS9 (PH domain-containing protein DDB_G0275795-like OS=Cucurbita moschata OX=3662 GN=LOC111439565 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 200/215 (93.02%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFI TFEKQVLAFNIIT
Sbjct: 169 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIGTFEKQVLAFNIIT 228

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKR LLELKAEIELRGKA KEA DAKTRMAAMMQTDQ
Sbjct: 229 RKRALGEFRSEERLMFEQALMQEEKRKLLELKAEIELRGKASKEAQDAKTRMAAMMQTDQ 288

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TR E QANEMMVR PMRT AHVGSQS  DVPVGHG+GEQEQVHPSEMINGW NN TQGDE
Sbjct: 289 TRGETQANEMMVRAPMRTGAHVGSQS-SDVPVGHGVGEQEQVHPSEMINGWRNNTTQGDE 348

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 349 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 382

[Close]

BLAST of Spg024464 vs. ExPASy TrEMBL
Match: A0A6J1E2K6 (bromodomain-containing protein DDB_G0280777 OS=Momordica charantia OX=3673 GN=LOC111025908 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 8.8e-102
Identity = 201/215 (93.49%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 161 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 220

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAH+AKTRMA+MMQTDQ
Sbjct: 221 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHEAKTRMASMMQTDQ 280

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGDE 390
           TRAEPQANEMM R PMRT A V SQS GDV VGHG+GEQEQVHPSEM+NGWG NNTQGDE
Sbjct: 281 TRAEPQANEMMARVPMRTGALVRSQS-GDVQVGHGVGEQEQVHPSEMMNGWG-NNTQGDE 340

Query: 391 KEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 341 KEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 373

[Close]

BLAST of Spg024464 vs. ExPASy TrEMBL
Match: A0A6J1H2M5 (putative mediator of RNA polymerase II transcription subunit 26 OS=Cucurbita moschata OX=3662 GN=LOC111459804 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 3.3e-101
Identity = 198/216 (91.67%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT
Sbjct: 186 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 245

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQ-TD 330
           RKR LGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAG+EAHDAK RMAAMMQ TD
Sbjct: 246 RKRTLGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGREAHDAKMRMAAMMQTTD 305

Query: 331 QTRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMINGWGNNNTQGD 390
            TRAEPQANEMMVR P+RT AHVGSQS  DV VGH +GEQEQVHP+EM+NGWGNNNTQGD
Sbjct: 306 LTRAEPQANEMMVRGPLRTGAHVGSQS-SDVRVGHSVGEQEQVHPNEMVNGWGNNNTQGD 365

Query: 391 EKEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           +KE SEDLLNDEEAENGDTGMHDSWREVGEFDLN+R
Sbjct: 366 DKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNTR 400

[Close]

BLAST of Spg024464 vs. ExPASy TrEMBL
Match: A0A0A0KJB5 (GLTSCR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408200 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 4.8e-100
Identity = 201/226 (88.94%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 200 AVPLSWLGLAWLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATF 259
           ++P+ ++G  WLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATF
Sbjct: 3   SLPIPFVG--WLLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATF 62

Query: 260 EKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAK 319
           EKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNL ELKAEIELRGKA KEAHDAK
Sbjct: 63  EKQVLAFNIITRKRALGEFRSEERLMFEQALMQEEKRNLQELKAEIELRGKASKEAHDAK 122

Query: 320 TRMAAMMQTDQTRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEMIN 379
           TRMAAMMQTDQTR+EPQANEMM+R  MRT AHVGSQS  DVPV    G+QEQ HPSEMIN
Sbjct: 123 TRMAAMMQTDQTRSEPQANEMMIRASMRTGAHVGSQS-NDVPV----GDQEQPHPSEMIN 182

Query: 380 GWGNNNTQGDEKEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           GWG NNTQGDEKE SEDLLNDEEAENGDTGMHDSWREVGEFDLNSR
Sbjct: 183 GWG-NNTQGDEKEASEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 220

[Close]

BLAST of Spg024464 vs. TAIR 10
Match: AT5G17510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 257.7 bits (657), Expect = 1.7e-68
Identity = 143/216 (66.20%), Postives = 177/216 (81.94%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDDRILDSDPTGQ LSRSQQWD+NI+AK++EF ATFEKQ LAFNIIT
Sbjct: 161 LLPYHVVADYEAEEDDRILDSDPTGQALSRSQQWDNNIAAKVAEFTATFEKQALAFNIIT 220

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQTDQ 330
           RKRA+GEFRSEERLM EQAL+Q+E++ L+ELKAE++ R KAG+EA +AK RMAA+ Q  Q
Sbjct: 221 RKRAMGEFRSEERLMVEQALLQDERKALIELKAEMD-REKAGREAQEAKLRMAALAQAGQ 280

Query: 331 TRAEPQANEMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQ-EQVHPSEMINGWGNNNTQGD 390
           +++     E+M R P+R  A VG+Q G ++ + H +GEQ   ++P EM+NGWG NN+Q +
Sbjct: 281 SQSHA---EIMARNPLRANA-VGNQ-GSNIQLSHEMGEQGRNMNPDEMMNGWG-NNSQRE 340

Query: 391 EKEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
           +KE SED LNDEE ENG+TG  ++WRE GEFDLNSR
Sbjct: 341 DKEPSEDFLNDEENENGETGEQENWREAGEFDLNSR 369

[Close]

BLAST of Spg024464 vs. TAIR 10
Match: AT3G03460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17510.1); Has 19732 Blast hits to 8747 proteins in 456 species: Archae - 0; Bacteria - 449; Metazoa - 7438; Fungi - 2099; Plants - 1550; Viruses - 53; Other Eukaryotes - 8143 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 1.5e-40
Identity = 110/226 (48.67%), Postives = 141/226 (62.39%), Query Frame = 0


Query: 211 LLPYHVVADYEAEEDDRILDSDPTGQMLSRSQQWDHNISAKISEFIATFEKQVLAFNIIT 270
           LLPYHVVADYEAEEDD I DS+ T Q L R QQWD+NI+AK++EF ATFE QV AF+ I 
Sbjct: 152 LLPYHVVADYEAEEDDSIFDSNTTSQTLPRCQQWDNNIAAKVAEFTATFEGQVQAFDRII 211

Query: 271 RKRALGEFRSEERLMFEQALMQEEKRNLLELKAEIELRGKAGKEAHDAKTRMAAMMQ-TD 330
           +KR+ G+ R EERLM EQ L+ +E+   ++L  E+        +A DA+ RMAA+ Q   
Sbjct: 212 QKRSDGD-RVEERLMMEQVLLNDERNACIQLDREM--------KAQDARLRMAALAQAAG 271

Query: 331 QTRAEPQAN---EMMVRPPMRTAAHVGSQSGGDVPVGHGIGEQEQVHPSEM---INGWG- 390
           Q RAE       EMM R P+R  A           +G+   +   ++P+EM   +NGWG 
Sbjct: 272 QARAEESQQSHAEMMARNPLRANA-----------IGNHGEQGRNMNPNEMMLLMNGWGN 331

Query: 391 ---NNNTQGDEKEGSEDLLNDEEAENGDTGMHDSWREVGEFDLNSR 426
              NNN+Q +EKE  ED LNDEE ENG+   H+ WR  G+FDLN R
Sbjct: 332 NNNNNNSQKEEKEPLEDFLNDEENENGE---HEKWRRSGDFDLNIR 354

The following BLAST results are available for this feature:

BLAST of Spg024464 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887907.1	7.4e-103	94.88	involucrin [Benincasa hispida]	[more]
KAG6571746.1	9.6e-103	93.49	hypothetical protein SDJN03_28474, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023554795.1	9.6e-103	93.49	PH domain-containing protein DDB_G0275795-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973214.1	4.8e-102	93.02	ras-interacting protein RIP3 [Cucurbita maxima]	[more]
XP_022932951.1	8.2e-102	93.02	PH domain-containing protein DDB_G0275795-like [Cucurbita moschata]	[more]

BLAST of Spg024464 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024464 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IDW9	2.3e-102	93.02	ras-interacting protein RIP3 OS=Cucurbita maxima OX=3661 GN=LOC111471787 PE=4 SV...	[more]
A0A6J1EXS9	3.9e-102	93.02	PH domain-containing protein DDB_G0275795-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1E2K6	8.8e-102	93.49	bromodomain-containing protein DDB_G0280777 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1H2M5	3.3e-101	91.67	putative mediator of RNA polymerase II transcription subunit 26 OS=Cucurbita mos...	[more]
A0A0A0KJB5	4.8e-100	88.94	GLTSCR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408200 PE=...	[more]

BLAST of Spg024464 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17510.1	1.7e-68	66.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G03460.1	1.5e-40	48.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 284..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..425
None	No IPR available	PANTHER	PTHR15572:SF6	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-LIKE PROTEIN	coord: 211..425
None	No IPR available	PANTHER	PTHR15572	GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1	coord: 211..425
IPR015671	GLTSCR protein, conserved region	PFAM	PF15249	GLTSCR1	coord: 211..302 e-value: 6.8E-14 score: 52.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024464.1	Spg024464.1	mRNA