Spg024462 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024462
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold12: 16693006 .. 16695392 (+)
RNA-Seq ExpressionSpg024462
SyntenySpg024462
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGCAATGCCCCACCACCGCCTAAGCTGATCACCAACCTATTTTTAGTCATTTTCAGCCCCATTTCCTCATCATTTTTCATCCAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAAATAAGAGGTGAGATTTGATTTTCTTGAAATTTAGTTCATTTTCTAACAAAATTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTACTGGATTTTGGAATGGAAAACAGGGCACAGGATTGTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACAACTTGCATGAAGATTTCCTGAGCCAAAAAATGACTTTAATTAGTGTTATTTTCAGGAGTTAGATAAAGGGTAGCAGAGAACCTCGAATCTGTATTGTCTGTGTTCGGGGCAATTCTGGGCAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTAAGTATTGAGGACGTTATGGGTATTGGAAGTTAGCGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGGTTCTTAATTCAAGTGTCTAGAATTTATGAGCATGGAAGAATGAGACCATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATGGTTTCCAACGGTTGTTCATGTTTAGATGTTTACATGCTTTTCTATGAATGATACATGCTTTTTATGAATGGTTTCAAGCTTAAGTTATGAGCTTAAATTTTCTAACGAGGTTTATAAATGAGCACGTGATTATTGAGTTCCTGAAAAATTGTTGAAACGACATCCTTTTAAGCCAAGCGTGTATTAGCAAGAATTATTTAAAGATTTTCGGGTTTTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAATGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTACCGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTAGATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACCACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAGTGACGGACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTTATGTTAAATGCTTGATTTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTCCATAGCTCATTCTTTCAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTATATATTGAGTATGTTCATATTGCAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTTGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGACATCTATATCAGGTTAATATCCGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGGAAGTTTTTTTTCAGGGATTTCGCTGTGTTCTGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGATAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGTCCCCCAAACTTGAATTATTCATTGTCCCCAATGAATTATTAATTTTGTGAACAATACCCCCAAACTTAAATTTTTCTATTTGAATTTTAATCCTATGCGCGGGACTAGAACTAAGCTTAAAGTGGATCAAAGAAGTCAACACTACCTCCAAAATTTTTCTTGCCGCAGCATCGACCAAGCTAGAAGAATTGCTCAAGCAAAAGGTTTCTGGAGATCAGAATACCTTGATCTAA

mRNA sequence

ATGGACAGCAATGCCCCACCACCGCCTAAGCTGATCACCAACCTATTTTTAGTCATTTTCAGCCCCATTTCCTCATCATTTTTCATCCAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTGGCACAGGATTGTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGATAAAGGGTAGCAGAGAACCTCGAATCTGTATTGTCTGTGTTCGGGGCAATTCTGGGCAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTATATATTGAGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGATAAGCTAGCAGGTGGTCCGGGAGGGGCATCGACCAAGCTAGAAGAATTGCTCAAGCAAAAGGTTTCTGGAGATCAGAATACCTTGATCTAA

Coding sequence (CDS)

ATGGACAGCAATGCCCCACCACCGCCTAAGCTGATCACCAACCTATTTTTAGTCATTTTCAGCCCCATTTCCTCATCATTTTTCATCCAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTGGCACAGGATTGTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTCGAATCAGAAGCTCTATTTGATAAAGGGTAGCAGAGAACCTCGAATCTGTATTGTCTGTGTTCGGGGCAATTCTGGGCAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTATATATTGAGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGATAAGCTAGCAGGTGGTCCGGGAGGGGCATCGACCAAGCTAGAAGAATTGCTCAAGCAAAAGGTTTCTGGAGATCAGAATACCTTGATCTAA

Protein sequence

MDSNAPPPPKLITNLFLVIFSPISSSFFIQLSEHFKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNWHRIVEQTRRISGVLWCFEHSGVYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHFFRPRGNRSSLQTGELDKTVEIELLVPDTLPTSAESSRTSSSTWVELYIEFNVQEGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTKLEELLKQKVSGDQNTLI
Homology
[Close]
BLAST of Spg024462 vs. NCBI nr
Match: KAA0067117.1 (hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ97479.1 hypothetical protein E5676_scaffold598G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-23
Identity = 79/175 (45.14%), Postives = 93/175 (53.14%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGW-ESHFHFFR--------------PRGN 153
           V+KSNQKLYLI+  REPRI + C+        W    F F +              PRGN
Sbjct: 40  VHKSNQKLYLIRSGREPRI-LYCLCSGKFWTNWLRISFSFLQVLEVRISNLENLEMPRGN 99

Query: 154 RSSLQTGELDKT-----------------VEIELLVPDTLPTSAESSRTSSSTWVELYIE 213
           RSSLQTGELDKT                 VEIEL VPDTLPTSAES  ++SSTW+ELY E
Sbjct: 100 RSSLQTGELDKTVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFE 159

Query: 214 F-NVQ-----------------EGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTK 219
           F +V+                 EG    +  DDV WLH +FR K+AGGPGG  T+
Sbjct: 160 FVHVEMLFYKPSDVRAASYVCWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGGVTE 213

[Close]
BLAST of Spg024462 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 6.0e-22
Identity = 104/297 (35.02%), Postives = 127/297 (42.76%), Query Frame = 0 

Query: 17  LVIFSPISSSFF----IQLSEHFKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNW 76
           L++F P   SF      +LSEHF+ERVK EEEEEFRG  +++  KSSCKA+H RIW   +
Sbjct: 54  LILFQPNFISFLHHFPSKLSEHFEERVK-EEEEEFRGLRLKKIGKSSCKANHCRIWSTGF 113

Query: 77  HRIVEQTRRISGVLWCFEHSGVYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHF 136
                     S  L   E   V KSNQKLY    S           G SG+  W+     
Sbjct: 114 SSKPRGFLVFSDALSILE---VQKSNQKLYWDIES-----------GKSGK--WD----- 173

Query: 137 FRPRGNRSSLQTGELDK------------------------------------------- 196
             PRGNRSSLQTG+LDK                                           
Sbjct: 174 VMPRGNRSSLQTGQLDKIEISIDYMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSV 233

Query: 197 ------------------------------------TVEIELLVPDTLPTSAESSRTSSS 218
                                               ++EIELLVPDTLPTSAESS ++SS
Sbjct: 234 GQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIELLVPDTLPTSAESSGSNSS 293

[Close]
BLAST of Spg024462 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-18
Identity = 73/165 (44.24%), Postives = 83/165 (50.30%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHFFRPRGNRSSLQTGELDKT--- 153
           V+KSNQKLYL   S           G SG+  W+        RGNRSSLQ+GELD T   
Sbjct: 38  VHKSNQKLYLDIES-----------GKSGK--WDVML-----RGNRSSLQSGELDTTVIF 97

Query: 154 --------------VEIELLVPDTLPTSAESSRTSSSTWVELYIE--------------- 213
                         VEIEL VPDTLPTSAESS ++SSTW+ELY E               
Sbjct: 98  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 157

Query: 214 ------FNVQEGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTKLE 221
                 F+V  G    +  DDV WLHA+FR K  GGPGG  T LE
Sbjct: 158 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVTTLE 184

[Close]
BLAST of Spg024462 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-18
Identity = 73/165 (44.24%), Postives = 83/165 (50.30%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHFFRPRGNRSSLQTGELDKT--- 153
           V+KSNQKLYL   S           G SG+  W+        RGNRSSLQ+GELD T   
Sbjct: 38  VHKSNQKLYLDIES-----------GKSGK--WDVML-----RGNRSSLQSGELDTTVIF 97

Query: 154 --------------VEIELLVPDTLPTSAESSRTSSSTWVELYIE--------------- 213
                         VEIEL VPDTLPTSAESS ++SSTW+ELY E               
Sbjct: 98  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 157

Query: 214 ------FNVQEGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTKLE 221
                 F+V  G    +  DDV WLHA+FR K  GGPGG  T LE
Sbjct: 158 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVTTLE 184

[Close]
BLAST of Spg024462 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-18
Identity = 78/206 (37.86%), Postives = 92/206 (44.66%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGW-ESHFHFFR----------------PR 153
           V+KSNQKLYLI+  REPRI + C+      + W    F F +                PR
Sbjct: 26  VHKSNQKLYLIRSGREPRI-LYCLCSGQFWMNWLRISFSFLQLWVLEVRISNLENLEMPR 85

Query: 154 GNRSSLQTGELDKT---------------------------------------------- 213
           GNR SLQT E+DKT                                              
Sbjct: 86  GNRLSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTTSFFKMFST 145

Query: 214 --VEIELLVPDTLPTSAESSRTSSSTWVELYIE-FNVQEGQRVSLEE------------- 218
             VEIEL VPD LPTSAESSR++SSTW+ELY E  +V+   +V L+              
Sbjct: 146 FLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWI 205

[Close]
BLAST of Spg024462 vs. ExPASy TrEMBL
Match: A0A5A7VIY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold598G00400 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 9.1e-24
Identity = 79/175 (45.14%), Postives = 93/175 (53.14%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGW-ESHFHFFR--------------PRGN 153
           V+KSNQKLYLI+  REPRI + C+        W    F F +              PRGN
Sbjct: 40  VHKSNQKLYLIRSGREPRI-LYCLCSGKFWTNWLRISFSFLQVLEVRISNLENLEMPRGN 99

Query: 154 RSSLQTGELDKT-----------------VEIELLVPDTLPTSAESSRTSSSTWVELYIE 213
           RSSLQTGELDKT                 VEIEL VPDTLPTSAES  ++SSTW+ELY E
Sbjct: 100 RSSLQTGELDKTVIFLLSTLSVLYDNNAVVEIELPVPDTLPTSAESFGSNSSTWLELYFE 159

Query: 214 F-NVQ-----------------EGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTK 219
           F +V+                 EG    +  DDV WLH +FR K+AGGPGG  T+
Sbjct: 160 FVHVEMLFYKPSDVRAASYVCWEGSAGIVRGDDVCWLHTVFRAKIAGGPGGGVTE 213

[Close]
BLAST of Spg024462 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-22
Identity = 104/297 (35.02%), Postives = 127/297 (42.76%), Query Frame = 0 

Query: 17  LVIFSPISSSFF----IQLSEHFKERVKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQNW 76
           L++F P   SF      +LSEHF+ERVK EEEEEFRG  +++  KSSCKA+H RIW   +
Sbjct: 54  LILFQPNFISFLHHFPSKLSEHFEERVK-EEEEEFRGLRLKKIGKSSCKANHCRIWSTGF 113

Query: 77  HRIVEQTRRISGVLWCFEHSGVYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHF 136
                     S  L   E   V KSNQKLY    S           G SG+  W+     
Sbjct: 114 SSKPRGFLVFSDALSILE---VQKSNQKLYWDIES-----------GKSGK--WD----- 173

Query: 137 FRPRGNRSSLQTGELDK------------------------------------------- 196
             PRGNRSSLQTG+LDK                                           
Sbjct: 174 VMPRGNRSSLQTGQLDKIEISIDYMTEILSLRLYGTVCPQVIFPLSTLSVLRDNDAVVSV 233

Query: 197 ------------------------------------TVEIELLVPDTLPTSAESSRTSSS 218
                                               ++EIELLVPDTLPTSAESS ++SS
Sbjct: 234 GQTHYDKDDGVPGGPHYIVGLVNVGCTGRVLHHIDRSLEIELLVPDTLPTSAESSGSNSS 293

[Close]
BLAST of Spg024462 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-18
Identity = 73/165 (44.24%), Postives = 83/165 (50.30%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHFFRPRGNRSSLQTGELDKT--- 153
           V+KSNQKLYL   S           G SG+  W+        RGNRSSLQ+GELD T   
Sbjct: 38  VHKSNQKLYLDIES-----------GKSGK--WDVML-----RGNRSSLQSGELDTTVIF 97

Query: 154 --------------VEIELLVPDTLPTSAESSRTSSSTWVELYIE--------------- 213
                         VEIEL VPDTLPTSAESS ++SSTW+ELY E               
Sbjct: 98  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 157

Query: 214 ------FNVQEGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTKLE 221
                 F+V  G    +  DDV WLHA+FR K  GGPGG  T LE
Sbjct: 158 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVTTLE 184

[Close]
BLAST of Spg024462 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-18
Identity = 73/165 (44.24%), Postives = 83/165 (50.30%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGWESHFHFFRPRGNRSSLQTGELDKT--- 153
           V+KSNQKLYL   S           G SG+  W+        RGNRSSLQ+GELD T   
Sbjct: 38  VHKSNQKLYLDIES-----------GKSGK--WDVML-----RGNRSSLQSGELDTTVIF 97

Query: 154 --------------VEIELLVPDTLPTSAESSRTSSSTWVELYIE--------------- 213
                         VEIEL VPDTLPTSAESS ++SSTW+ELY E               
Sbjct: 98  PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYFTNQVM 157

Query: 214 ------FNVQEGQRVSLEEDDVRWLHAIFRDKLAGGPGGASTKLE 221
                 F+V  G    +  DDV WLHA+FR K  GGPGG  T LE
Sbjct: 158 SRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVTTLE 184

[Close]
BLAST of Spg024462 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-18
Identity = 78/206 (37.86%), Postives = 92/206 (44.66%), Query Frame = 0 

Query: 94  VYKSNQKLYLIKGSREPRICIVCVRGNSGQIGW-ESHFHFFR----------------PR 153
           V+KSNQKLYLI+  REPRI + C+      + W    F F +                PR
Sbjct: 26  VHKSNQKLYLIRSGREPRI-LYCLCSGQFWMNWLRISFSFLQLWVLEVRISNLENLEMPR 85

Query: 154 GNRSSLQTGELDKT---------------------------------------------- 213
           GNR SLQT E+DKT                                              
Sbjct: 86  GNRLSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRRWECRTGPTTSFFKMFST 145

Query: 214 --VEIELLVPDTLPTSAESSRTSSSTWVELYIE-FNVQEGQRVSLEE------------- 218
             VEIEL VPD LPTSAESSR++SSTW+ELY E  +V+   +V L+              
Sbjct: 146 FLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWI 205

The following BLAST results are available for this feature:
BLAST of Spg024462 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0067117.11.9e-2345.14hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa] >TYJ9747... [more]
TYK08801.16.0e-2235.02hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
KAA0062409.13.1e-1844.24reverse transcriptase [Cucumis melo var. makuwa][more]
TYK26572.13.1e-1844.24putative Retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0037581.14.0e-1837.86reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of Spg024462 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg024462 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VIY99.1e-2445.14Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CAC62.9e-2235.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V9N31.5e-1844.24Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DSY71.5e-1844.24Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3BTP32.0e-1837.86Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
BLAST of Spg024462 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024462.1Spg024462.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016779 nucleotidyltransferase activity