Spg024374 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024374
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 22935188 .. 22939571 (+)
RNA-Seq ExpressionSpg024374
SyntenySpg024374
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGACAGGGCATTGCACAAGCCCTCGTTACTACCGAAGGTTATAGGGCTGAGCAAGATGCACTCAGGGAAATAAGGGCTGAAAAAGAGATGGAAAATCAGAGCATGAGGGAAGAAGATGAGTTTGCAAGAAAAAGGGACTTGGAAGAGGAAAAGAAAGCTGAGAAGAATAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGTGACGGTGCACGAGTTTGTTGAGTCCTCAGGTCAAATAAATTTATAATCCACGGCACTTGTAAACCCGAGACTTTCTTTAGATAATTTTCTCTTGTCATCTATAGTGGAAGTTGGACTAAGATGTTGGGACTTGCCAATTGAAAAGAAGAAAAGAAAAGAATGGAAATAAAGAAGAAAAGAAAAGAAAAGAAAAGGAAAAAGAAAAGACACAAAAAAAAACAAAGAAAAAGAAAGAAAATGGAAATGGACAGCAAGACACCCACCACCGCTTCACCCATTATCAGCCCCATTTCTCATCTTTTTCCATCCAAACTTTCAGAGCACTTTAAGGAGAGAGAGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGGAATAAGAGGTGAGATTTGATTTTCTTGAAAGTTAGTTCATTTTCTAGCAAATTTCATGAAGGAAGCTTGAGCTAAGTCGTATGAGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAAGATTTTCGAGCAAAGCAGGAGGATCTCTGATTTTCTCTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGGAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTTCCTACACCTTTCATGAAGATTTCGTGAGCCAGAAATGACTTGAAGTAGGGTTAGTTTCAGGAGTTAGATAAAGGGTAGAAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGAGCAATTCTGGGCAAATCGGTTGGGAATCTCGTTTTTATTTCTTCAGGTAAGTTGTAGAGTGTTTGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTACGAATTAAGGAAGTTATGGGTATTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGGAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCGTGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATTGTTTGCAACGGTTGTTCATGTTTAGACGTTTTATATGATTTACCATGAATGATATATGATTTTTATGAACGGTTTCAAGCATAAGTTTTGAGCTCAGATTTTCTAACGAGGTTTATATATAGCACGTGGCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAATTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGACTGCTGGACGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAACGTTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATGTTTTAGAAAGCCTTTATCCTTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCATAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACATCTGCTGAAAGTTCCAGAACAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGACATCTATATCAGGTTATTATCCGAACCGAGATATGTCAGGGCGGCACCTCGTGTATGTTGAAATGTTTTTAGGGATTCTGCTGTGTTGTGTTTCATGTAGAATATTTTATATCTATGATTAGTGTGTTTATCAGGTTCAATGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGTCCGAGAGGGGGTGTGACAGCACTACTACTAATTTTTGTAGCAATAGCGGCCGGGAATGAAAACAGGGGGATCTAATAAGTGTAGGATTTTGTGCTTATGAAAACAGGGGGGATTTTTTATGATGAATGACAAGCAAGAAAAATAAAATAAAATAGAATAACTGAAAACTGAATTTTAAATGGCACAAAACTAAACATGCAAAGGAGAAATAAGACGGGATCAAATACATCAAAAGGGATCGTTGGATTATGATTTATTATGCCTGATTCCAATTCATTTGCTTCCTAGATTTCTCTAATGATTGTTCTAAACTGATTTCATTAGTCCGGTTGGCTTCTGGGTTACTCGGAGGACCCCCCTACACTAACCTATGGTAATTAGCTCGCTAATCATGAATTCAGCAATTAACAAGATTAATTAATATAGACTCTATCGCTCGCCACCCCTTATGCATAATGTAGTAACCATCTGAGACCTCTGCAACGGTTACAACCTATATCTAACTAGTTTATTAACAAGCAATTTTACAACTGCCTATTAAAACTAGCCGCTTTGGGATCGTGGGTCCGGAATTATAGGTACTAAATTGAAATGCAATTTAAATCTAAATTCCCACAACCTTTAACATGTATCTTAGGCCTATCAAGAGTCGTCTCGCGTAGAGAGTGGCTTGCCTCAACCTAGTGGCTATCTCAAATAACTAATACAATACACAAGCGGTAATCGCATAGGGAGTCGATCCTATTGGTTTAAACGAGATTACATGCAAAACTCAATGAAAATACGAGAAGGAAAGAAGATATAAAGCCGAAAACTCAGTCAATATCATTAGGAATCAAGACATAAATCCAATCCAACGATCTAAAGAAGTTTACCTACGCATAGATGAAGTAAATGCGATAAACAACATGAAAGAGTCTATAGTAAATGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTCTATAGTGTTTTGTGTGTCGATTGTGTTAAATAGGGTTGTTTTTAGATGAATATTATATGCTTTAACCCATTTGGAAGAATGGATGCTTGGAAAGTTATTTTGTGCATAAAATATTGTGGAGCGACTTAAGGGAGCAAAATCCGTGATCCAGTAAAGCAAGGAGCAAAACTGCCACGTAACAGCTCGTAATCCATTTTAATGAAGTGGCGTTAGCTGAATTAGTTTCGGATCTAAGAAGCTTGGAGAACCTTCCACGTGTACAATTTGACCTAATTAGGGTTTGATCTCACTCTATAAAAGGAAGGAGTCGTCTCAAGTCAAAAACATTCCATTTTTGGGGAATTCCAATTTCCATCTTTGGAAGCCGAATAGAGGATGAAAGATTGGAGATTCAAGAAGACCATCAACTACGGATCTAATCAAGGGAATTAATCTTTTCTTGTAATTTCTTGTAGTTATAGTTGCACATACTCTGATTGTTGCGTGTGTTGTGATGAACCTTATGTACTAAATTTGCTTAGGTGTTGGTTAGGAATTATGTAATTGTCGTGCTTTATTATCTATGCAATATATGTTGATTTGAGCATCTTGATTATTTGTTGTGCATATTTCCATTTTATGCCCGCCTGGCCAGCCGGTATGAATATCACTTCTTAGTTTTAGGGATGATTTGAGAAGTGTGTGGCATTTAATCACACTAGACCATTATGTGTTGGTGAACGCCAGTGACTGAGTTAGGAATAACCAGTTGCCTAGTGCTTGATCGGTAGCACATCATTGGAGTTGACACACATTCTAAAAAATCCAGACTTCTGGGAGGATCCTGCTAATAAGACTGCAAGACAATTGCCTAATCAATAA

mRNA sequence

ATGATCCGACAGGGCATTGCACAAGCCCTCGTTACTACCGAAGGTTATAGGGCTGAGCAAGATGCACTCAGGGAAATAAGGGCTGAAAAAGAGATGGAAAATCAGAGCATGAGGGAAGAAGATGAGTTTGCAAGAAAAAGGGACTTGGAAGAGGAAAAGAAAGCTGAGAAGAATAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGTGACGGTGCACGAGTTTGTTGAGTCCTCAGAGCACTTTAAGGAGAGAGAGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTAG

Coding sequence (CDS)

ATGATCCGACAGGGCATTGCACAAGCCCTCGTTACTACCGAAGGTTATAGGGCTGAGCAAGATGCACTCAGGGAAATAAGGGCTGAAAAAGAGATGGAAAATCAGAGCATGAGGGAAGAAGATGAGTTTGCAAGAAAAAGGGACTTGGAAGAGGAAAAGAAAGCTGAGAAGAATAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGTGACGGTGCACGAGTTTGTTGAGTCCTCAGAGCACTTTAAGGAGAGAGAGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTTGAGGTTGAAGAAGATAAGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTAG

Protein sequence

MIRQGIAQALVTTEGYRAEQDALREIRAEKEMENQSMREEDEFARKRDLEEEKKAEKNKEEEKQEAERVTVHEFVESSEHFKEREKEEEEEEFRGFEVEEDKKSSCKASHSRIWVQN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024374.1Spg024374.1mRNA