Spg024360 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024360
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold4: 19788136 .. 19789404 (-)
RNA-Seq Expression	Spg024360
Synteny	Spg024360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGACCCATAACCCGAGTTTTACTCTTGGTTGGCCTAACTCATCACACGGCAGGTAGCTCTTTTTACCCCCTATATAGCATGCTTTTTCTTTAAAAATAAAAGTAATGTAAACGAGCGTATGATTTTCTTTTAAGCTTGCACTCATTTTTCTTTTCTTTTTCTTTCTTTTTCTTTTGCTCTCTCTTTTCTTTTTCTTTGGCATATTTTCTTTTTTTTTCTCCTAGGCAAGATATTACATGCGAATTTGAAGTTATTTGACACTCTAGCTCATCCCTACACCTATCGAGGTGACAACAAGCATATGGATTCTATAATTTGCTCCTATGTTTTCAAACTAATCCTAGGCATGCTAAGGTTTGGTCTTGCAAGAAATGTACTAGAAAAAAATTAAAAAGGCTCAATTTCTGGGCAACATGCTTATCATTCAATAAAAGCAATAAAGTTGGCAGGATGACACATCGTTGATTTTCATAATCAGAAAAAAAACCAGACCATCCATACATCAACACTCAATCATCTAAAATTTGTTTAGATCCGTTTGGTGTCGTCTTCGAGTCCCGAGCGCTCATCTTAGGTCTTTTCACCGTCTTGCCATCCCACATACTTCAAGATGGACCAAAACCACGCTAAAATCCTTGAATTAACACCGAAATTGAAAAATGGACTCCGTTGAAGCGCTTGATACCAAACCGCTACAAAACATAACTTTAAACAAGATAATTGTCATAAAACTAACAAGATTAAGGACAAATAATCATGGGCAGTTAGGTCCCATCAATTACCTGATCAAACATGAAAACGGACGCAGTGCAGCTGAAGGGAGATCTAAGAAGAAAAAAGAAAAGACAGTTCCCTGAGGAAGCATAACACTAGGGAAGCGACTTCTGTGCTTCCTCAAGTGAAGACACCACCATCACCGCTATCTATGAGGAGAAAACAAGCTGTTCCTCAGCCAAAGAAGATTCCAACAAAGAGGCCGAGAGTAGAAGTTCAAGTGGAAGCTCGCCAGACGCTCAGGCTCGTCTAGCTATCATGAAGAAGCGAGTTCTAACGTGTTAAAAAGCGTTTTTCACGAAGACAAGTCCTCTTCCAGCATTCATCGAGGATGTTTTGTGTAGGTATGGCTGGGAGTGGTTATGCAAAGAGCCGAAGGCTGTATCTATCCCATTGGTTCGCGAGTTCTATGCACAGATAGGGGAAGAGATGCAGACGACCATGCTCCTACGTGATAGGGTGGTGGACTTTGAAGAACCGTCTGATTAG

mRNA sequence

ATGCAGGGACCCATAACCCGAGTTTTACTCTTGGTTGGCCTAACTCATCACACGGCAGGCAAGATATTACATGCGAATTTGAAGTTATTTGACACTCTAGCTCATCCCTACACCTATCGAGGTGACAACAAGCATATGGATTCTATAATTTGCTCCTATGTTTTCAAACTAATCCTAGGCATGCTAAGTGAAGACACCACCATCACCGCTATCTATGAGGAGAAAACAAGCTGTTCCTCAGCCAAAGAAGATTCCAACAAAGAGGCCGAGAGTAGAAGTTCAAGTGGAAGCTCGCCAGACGCTCAGGCTCGTCTAGCTATCATGAAGAAGCGAGTTCTAACGTATGGCTGGGAGTGGTTATGCAAAGAGCCGAAGGCTGTATCTATCCCATTGGTTCGCGAGTTCTATGCACAGATAGGGGAAGAGATGCAGACGACCATGCTCCTACGTGATAGGGTGGTGGACTTTGAAGAACCGTCTGATTAG

Coding sequence (CDS)

ATGCAGGGACCCATAACCCGAGTTTTACTCTTGGTTGGCCTAACTCATCACACGGCAGGCAAGATATTACATGCGAATTTGAAGTTATTTGACACTCTAGCTCATCCCTACACCTATCGAGGTGACAACAAGCATATGGATTCTATAATTTGCTCCTATGTTTTCAAACTAATCCTAGGCATGCTAAGTGAAGACACCACCATCACCGCTATCTATGAGGAGAAAACAAGCTGTTCCTCAGCCAAAGAAGATTCCAACAAAGAGGCCGAGAGTAGAAGTTCAAGTGGAAGCTCGCCAGACGCTCAGGCTCGTCTAGCTATCATGAAGAAGCGAGTTCTAACGTATGGCTGGGAGTGGTTATGCAAAGAGCCGAAGGCTGTATCTATCCCATTGGTTCGCGAGTTCTATGCACAGATAGGGGAAGAGATGCAGACGACCATGCTCCTACGTGATAGGGTGGTGGACTTTGAAGAACCGTCTGATTAG

Protein sequence

MQGPITRVLLLVGLTHHTAGKILHANLKLFDTLAHPYTYRGDNKHMDSIICSYVFKLILGMLSEDTTITAIYEEKTSCSSAKEDSNKEAESRSSSGSSPDAQARLAIMKKRVLTYGWEWLCKEPKAVSIPLVREFYAQIGEEMQTTMLLRDRVVDFEEPSD

Homology

The following BLAST results are available for this feature:

BLAST of Spg024360 vs.


Match Name	E-value	Identity	Description

BLAST of Spg024360 vs.


Match Name	E-value	Identity	Description

BLAST of Spg024360 vs.


Match Name	E-value	Identity	Description

BLAST of Spg024360 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024360.1	Spg024360.1	mRNA