Spg024339 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024339
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase COP1-like
Locationscaffold4: 19790018 .. 19795238 (+)
RNA-Seq ExpressionSpg024339
SyntenySpg024339
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAAGACCTAAGTGGAGTGCTCGGGACTCGAAGACGACACCAAACGGATCAAGTTTTCAAGCAGCCAAACAAGGAAGACCCGAGAGATGGTGTCTCGACGCCTCGGATTCGAAGGGACGGAAAATTCACCGTCGGCATCGAGACGCCGGCCACAACACCTCGACACCAGCTCGCCTTTTTAAATACTGTGGCTTGCGATTAGAGCAGGAGCTGAAGGTCTTTTAGCAACTTAGAAGAGGAAACTCGATTGGGGCTTTTTGGTAGTCGTTCTCTCTCGGTTCTAGCTCCAACTTCTTCACTTTTCTTCTATATTTTATTGTTTCTAGGTAGATTAGGTTGGTTTCTCGAGCCTTGGGCTTGGATTAGGCTTGTCTATGGCCGTCTAAGCACCGTTCGTTGTAGTTGGGACCTCGGGATTGTAAGTACATTCGTATTTTTTTTAGAGATTCATGAGTATTCTGAGTTGATTTGTTGTTTATCTTGAGATTCTTGAACTTTACTCATGGTTTATTTGTTGTTTGTGACTTTAGATTCCCATTTTTATAATTAGCATGCTTAGTAGGTTAGATTGACGCCGTAACTCGCAGCTCGTATGTTAATAATCCGCTAAAGAATTCATTTCCAAGTAGTTAATGGATGGTTAGTTTAATAGTTAGAATTAGATTGATTCGTGAGCACGGGTCTTAAGAGAATACTCTGACTTTGCTGCTGACACGATAGATCTAGGGTCTAAGTCGATACTTGTGATTAATTGGGAGTCCCTCTAGTTAATTGTGGGTATTCTAGTCTAGAGCAACGATTAATTGATTTATTGGTTGTGGCCAGGTTAATTTATTGATAAATTGCATGTTGGTTCAACGGGTCTGTTGGGTTAGCGATCTAGGGGTATCTAGTTCTTAATGCAGTTGCTTGATTAATTGACTTTGACGAGTTCGTGGGGTTAATTAATTAGTAATTAGTAATTGAATCGATGGACGTTGGGATCGAGTCAATTGATTTAGAGTACCTATAGACAACATGCATATAAATCATTATCTGCTAATCGATGAGTAAAAAAATGAATGTACTAATCCCGAGCGTCTTCTGCTACTACGAGCGGCAATGGGAGATTGACTAACCTCCCGATTTACTTTTCTTTCATTTAATTTTCTATCAGTTTACTTTCTTAAGAATTGACTTTCTGTCAGTTTACTTTCTTACATGTGACCTTCGCCCGCAATTTTCACCATCTATCTCAAACCCCCTTTTCTCTGCCACTACGAAACACAAAAAGAGTTAGAAGTAAACCAGTTGTTCCCTGTGATTGACCCCGACCACTGCTACTGTAAGGTAGCTTGGTGTCCATGGACTATAAATTCGTTTTGGTGCAAGACCCGCGACACCGACGCGCCCAAACTGGTGAAAGTAAATTCGCTTTGATTCGAGCCCCGCATTAGCCTCTGTCAAAACTGGCGTCGTTGTCGGGGAACAGGGTGTTTATTTCTAATTAGTTTTGTGTTTTTCACCTTTTTCTTGTCTCTTGTGTTAGTTTGTTTCTTGCAGATCCAGTGACAAATCTTTACAAGAGCAAACTCCTCCCTACCAAGAAACAAGGAAAAGCGTCGTGCTTCATGGATATTTGGCAAGCTCTCGATCTCCTGTCTCGCTTGGATAGAGAGGGTCGAGAGTGCAGTGCAAGACAACTTTTCAGCTCCCAATTATCCACCACCCCCTTGCATCATAAATCACAAAGAAGGTAATGGATGGTCTGGTTGCTTTTTCTTTGATTATGAAAATCAACAATGTCTCATCCTGCAGACTTTATTGCTTTTATTGAAGGATAAGCATGTTGCCAAGAAATTGAGCCTTTTCAAATTTTTTCTAGTACTTTTCTTGCAAGAGCAAACCTTAGCATGTCTAGGATTAGTTTGAAAACTTAGGAGCGAATTATAGGATCCATATGCTTGTTGTCACCTCGATAGGTGTAGGGATGAGCTAGAGAGTTAAATACCTGCAAATTAGCATGTAATATCTTGTCTAGGAGAAAAGAAAGAAAATATGCCAAAGAAAAAGAAAATAGAGAGGACTTTATTATTGTAGGAATTCGACTTGGAGATAAAGGATAAGAAGGGATTAGAGAATGTCATTGCGGATCATTTGTCTCGTCTTGATCCAACATCATCTTTGCTGAAGCAATATGCCATTTCAGACTCATTTCCAGATGAACAGCTCTTTGTTGTTGAGGTAAAAGTGGTCAAGGATATCCCTTGGTATGCTGATATAGCAAACTTCTTAGTGAAGGGAGTCACTCCTCTTGATATGGATTGGAGGCAGATGAAAAAGTTTAAGCATGATGCAAAATTTTTCTATTGGGATGAGCCATTTATGTATAAGCAATGCTCTGATGGTATTATTCGTAGGTGTGTTTCAGGTGATGAAGCAAAGGAAATCCTGGAGCAATGTCACTCTTCGCCGTATGGAGGCCATTTCAGCGGTCAGAGGACAGCTATGAGGATTTTGCAATGTGGATTTTTCTGGCCTTCCTTATTTAAGGATGCCCACTGGTTTTACAATCAATGTGATGCTTGCCAAAGGAGATGAAATTTAGGGCCTAGAGATGAAATGCCTCTTACTTACATTTTAGAATTAGAATTATTTGATGTGTGGGGTATTGATTTTATGGGCCATTTCCCCCTTCTAATGGTAATGTTTTTATCTTATTTGCGCGGTTTGGGACACCTAGAGCTCTAGTGAGTGATGAGGGTACACACTTTGTGAATAATGTTTTGACTAAGCTTTTAGCTAAATATGGGATTAAGCATAGGATAGCTACCCCTTATCACCCACAAGCAAATGGTCAAGCTGAAATTAGTAATAGGGAAATCAAATCAATCTTAGAAAAAGTAGTCCATCCATCTAGGAAAGATTGGTCTTTTCGGTTAGATGAGGCTCTTTGGGCTTATAGGACAACCTATAAGACTCCTCAAGGTATGTCTCCCTATAGGTTAGTGTATGGAAAAACTTGTCATTTACCGTTAGAACTTGAGCATAAAACGTTTTGGGCTTTGAAGAAATTGAATTATGATCTAAGTCGTGCAGGGGCAATAAGAATGCTACATCTTAATGAATTAGAAGAATTTCGCCAATTTTCTTATGAAAAGGCGAAAATGTATAAAGAAAAGACTAAGCAGTGGCATGATAAGAAAATAAAGCCTAAAGAGTTTGTCAAAGGTCAAAGAGTTTTGCTTTATAACTCTAGATTAAAATTGTTTCCTGGAAAATTGAAATCTAAATGGTCAGGGCCATTTGTCGTGATTTAAGTTTTTTCCCATGGAGCAATTACTTTGCCCGATGAAAAGGATGGGAGAGTGTTCAAAGTTAATGGACAGCGAGTGAAACATTATTGGGTGAGCAGTTACAGGCGAAATATCCTTCCCTAAAGTTGGTTGATGAATAAGCGAGCGAGAATTTTGCGGGAGCATTTCACATAGCAATATTTTTGAGCTCCCAAGATTGGTTGCGATTTTATTTTTCGCTGATTTGGTTTGACTTTAATTCGAGTTATTTTGAATTAGATTTGGTTTGTTTAAATATTATCTGATTTATTTTAATTCATTGTTATTTTTAAATTCAGTAGATTTTATTTTTGGTGTATTTTTATTTTCACCATTTTAGTTTATATTTAATTTAATCTGATTAGTTTAGTTTAGATTGATTTTATTTTCGGTTATTTATATTCCTGTGTAGTTTAGGTTTTAATAATACATTTCCTGATTTTTTCGGCTAAAGATAAGATAAAATTAGATTTGATTTTGGCGGTTTTGAATTTGAATTTTCCCGTGTGAAAAGATTCTTCTAGAAGGAGATTTTGTTGCTTAGTTTGTTTTTGCAATCTTTTGGTTAGAGCGAATGCATCAGCAGAATATTACGGGATTTGGTTAGGAATTAAATATTTTACCGTTTGGATTTGAATTTCCCGTGGGCAGGTAACTTGCATGAGAGATCTGGTGCCTCCACGTGTCGCACATGGGTGATCTAACGGTCTAGCCGTTGGATAGCACACCAAGCATTTATCCGGCAATTTACTTTTACCGTTTGTTGGAACTTAATTTCTCATGATTACATGCAGATAAACGGTAACATTTTGATTAATGAAGGAATTTAATTCGGCCAGGATTTAAAATGTTGGAGCTCCATTTAAATCAAAGACTTGGTACGCTTTTCTTCTCATTTTTCTTTCGAAGCTTCCTTCTGCTCCCTTCCTGTTCTTGCGAGTGAGAAGAAATTTCATATTCTAATGGCAAAAACGAGAGGAAAGAAAGAGGGAGAAGTGGAGGAGCATGTGCCTACTACGCCTGTAGAGAGGGAAGCCAAACGGCTCAAAAGGCTTCAAGAGGCTGAGGTTTTCGCAGTATTAGAGAAGGTAATAGAAGACATTGTTGAGGAAGTTATCGCTGAGGAAGAACCAAAAGATTCTGAGAGCGAAAAAGATTTTGAAAAGATTGACGAAACAGGGCAAGAGAATCAAGAAAAGAAAGCAACAGGGTTGCAAGGGCCAAATATGACTAAAACAGTGGAGCAGGAGATTTTGGAAGACATAGTGAATGATCTGCCACGCCGCCGTCGTAAGCAGAAAACAGGGCAGGTAAAAAGGATACGGACCAACAGTCCATCTCCTCCTTCGACTGACTCGGAGAAAGAAGAATCTGGAAATCAAGAAGAAATTAGGAAGAAGAATGCAGAATATGAAACCGAGTTGAAAAATGGTAAGGACAAGGGCAAAGGTATTGCGGGGGTCGAGGTGGAAACAGAAGTGGCTTGATCAGAAGAAAGGGGGTTGCCTTATGAGCGCTTTCTGAATCATTTTGCTAGGGCAAAATATATTGACATGTTGAAGAGAGACTTCCTGTTTGAGAGAGGGTTCAGTGGTGATCTTCCGCATTTTCTGAGGGATGGCATCACAAACCATGGCTGGGAGTTATTCTGTTCCAAACCAGATCCTGTGAATTCACAAGTGGTGCGAGAATTCTACGCAAATATTAATGAGAACGAGGGTTTCCAAGTTATCGTTCGTGGAGTAGCTGTCGATTGGAGTCCTGGTGCCATCAATTCGCTGTACAACCTTCATGATTTCCCGCACGCAGGTTATAATGAGATGGCAGTAGCGCCATCTAATGAGCAATTAAATGATGCAGCTCGGGAAGTTGGAATAGAAGGGGCACAATGGCGACTGTAA

mRNA sequence

ATGGCCAAAAGACCTAAGTGGAGTGCTCGGGACTCGAAGACGACACCAAACGGATCAAGTTTTCAAGCAGCCAAACAAGGAAGACCCGAGAGATGGTGTCTCGACGCCTCGGATTCGAAGGGACGGAAAATTCACCGTCGGCATCGAGACGCCGGCCACAACACCTCGACACCAGCTCGCCTTTTTAAATACTGTGGCTTGCGATTAGAGCAGGAGCTGAAGTTGGGACCTCGGGATTATCCAGTGACAAATCTTTACAAGAGCAAACTCCTCCCTACCAAGAAACAAGGAAAAGCGTCGTGCTTCATGGATATTTGGCAAGCTCTCGATCTCCTGTCTCGCTTGGATAGAGAGGGTCGAGAGTGCAGTGCAAGACAACTTTTCAGCTCCCAATTATCCACCACCCCCTTGCATCATAAATCACAAAGAAGTGAGAAGAAATTTCATATTCTAATGGCAAAAACGAGAGGAAAGAAAGAGGGAGAAGTGGAGGAGCATGTGCCTACTACGCCTGTAGAGAGGGAAGCCAAACGGCTCAAAAGGCTTCAAGAGGCTGAGGTTTTCGCAGTATTAGAGAAGGTAATAGAAGACATTGTTGAGGAAGTTATCGCTGAGGAAGAACCAAAAGATTCTGAGAGCGAAAAAGATTTTGAAAAGATTGACGAAACAGGGCAAGAGAATCAAGAAAAGAAAGCAACAGGGTTGCAAGGGCCAAATATGACTAAAACAGTGGAGCAGGAGATTTTGGAAGACATAGTGAATGATCTGCCACGCCGCCGTCGTAAGCAGAAAACAGGGCAGGTAAAAAGGATACGGACCAACAGTCCATCTCCTCCTTCGACTGACTCGGAGAAAGAAGAATCTGGAAATCAAGAAGAAATTAGGAAGAAGAATGCAGAATATGAAACCGAGTTGAAAAATGGTAAGGACAAGGGCAAAGGGTTCAGTGGTGATCTTCCGCATTTTCTGAGGGATGGCATCACAAACCATGGCTGGGAGTTATTCTGTTCCAAACCAGATCCTGTGAATTCACAAGTGGTGCGAGAATTCTACGCAAATATTAATGAGAACGAGGGTTTCCAAGTTATCGTTCGTGGAGTAGCTGTCGATTGGAGTCCTGGTGCCATCAATTCGCTGTACAACCTTCATGATTTCCCGCACGCAGGTTATAATGAGATGGCAGTAGCGCCATCTAATGAGCAATTAAATGATGCAGCTCGGGAAGTTGGAATAGAAGGGGCACAATGGCGACTGTAA

Coding sequence (CDS)

ATGGCCAAAAGACCTAAGTGGAGTGCTCGGGACTCGAAGACGACACCAAACGGATCAAGTTTTCAAGCAGCCAAACAAGGAAGACCCGAGAGATGGTGTCTCGACGCCTCGGATTCGAAGGGACGGAAAATTCACCGTCGGCATCGAGACGCCGGCCACAACACCTCGACACCAGCTCGCCTTTTTAAATACTGTGGCTTGCGATTAGAGCAGGAGCTGAAGTTGGGACCTCGGGATTATCCAGTGACAAATCTTTACAAGAGCAAACTCCTCCCTACCAAGAAACAAGGAAAAGCGTCGTGCTTCATGGATATTTGGCAAGCTCTCGATCTCCTGTCTCGCTTGGATAGAGAGGGTCGAGAGTGCAGTGCAAGACAACTTTTCAGCTCCCAATTATCCACCACCCCCTTGCATCATAAATCACAAAGAAGTGAGAAGAAATTTCATATTCTAATGGCAAAAACGAGAGGAAAGAAAGAGGGAGAAGTGGAGGAGCATGTGCCTACTACGCCTGTAGAGAGGGAAGCCAAACGGCTCAAAAGGCTTCAAGAGGCTGAGGTTTTCGCAGTATTAGAGAAGGTAATAGAAGACATTGTTGAGGAAGTTATCGCTGAGGAAGAACCAAAAGATTCTGAGAGCGAAAAAGATTTTGAAAAGATTGACGAAACAGGGCAAGAGAATCAAGAAAAGAAAGCAACAGGGTTGCAAGGGCCAAATATGACTAAAACAGTGGAGCAGGAGATTTTGGAAGACATAGTGAATGATCTGCCACGCCGCCGTCGTAAGCAGAAAACAGGGCAGGTAAAAAGGATACGGACCAACAGTCCATCTCCTCCTTCGACTGACTCGGAGAAAGAAGAATCTGGAAATCAAGAAGAAATTAGGAAGAAGAATGCAGAATATGAAACCGAGTTGAAAAATGGTAAGGACAAGGGCAAAGGGTTCAGTGGTGATCTTCCGCATTTTCTGAGGGATGGCATCACAAACCATGGCTGGGAGTTATTCTGTTCCAAACCAGATCCTGTGAATTCACAAGTGGTGCGAGAATTCTACGCAAATATTAATGAGAACGAGGGTTTCCAAGTTATCGTTCGTGGAGTAGCTGTCGATTGGAGTCCTGGTGCCATCAATTCGCTGTACAACCTTCATGATTTCCCGCACGCAGGTTATAATGAGATGGCAGTAGCGCCATCTAATGAGCAATTAAATGATGCAGCTCGGGAAGTTGGAATAGAAGGGGCACAATGGCGACTGTAA

Protein sequence

MAKRPKWSARDSKTTPNGSSFQAAKQGRPERWCLDASDSKGRKIHRRHRDAGHNTSTPARLFKYCGLRLEQELKLGPRDYPVTNLYKSKLLPTKKQGKASCFMDIWQALDLLSRLDREGRECSARQLFSSQLSTTPLHHKSQRSEKKFHILMAKTRGKKEGEVEEHVPTTPVEREAKRLKRLQEAEVFAVLEKVIEDIVEEVIAEEEPKDSESEKDFEKIDETGQENQEKKATGLQGPNMTKTVEQEILEDIVNDLPRRRRKQKTGQVKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKNGKDKGKGFSGDLPHFLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQWRL
Homology
[Close]
BLAST of Spg024339 vs. NCBI nr
Match: PON65868.1 (hypothetical protein PanWU01x14_113570 [Parasponia andersonii])

HSP 1 Score: 75.9 bits (185), Expect = 9.4e-10
Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKNGKDKGKGFSGD------LPH 327
           +KR+   +       SE  E+  +E I+ +    E          KGF GD       P 
Sbjct: 3   IKRVTRKASKAVKFKSEAAETRYEENIQNRPLSAE----------KGFVGDNSKPLEKPP 62

Query: 328 FLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN 387
           F+ D IT H W+LFC+ P+     +VREFYAN+   +   V VRGV V  S  AIN++Y 
Sbjct: 63  FIADVITQHNWQLFCAHPEDPIVPLVREFYANMTNPDDDTVYVRGVQVLLSSEAINTIYG 122

Query: 388 LHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQWRL 419
           L D P   ++E   A +  +L      V I GA+W +
Sbjct: 123 LGD-PIDEHSEFVEAITEPELATVLETVAIAGAEWNV 148

[Close]
BLAST of Spg024339 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii])

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-09
Identity = 52/154 (33.77%), Postives = 75/154 (48.70%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKNGKDKGKGFSGD------LPH 327
           +KR+   +       SE  E+  +E I+ +    E          KGF GD       P 
Sbjct: 3   IKRVAHKASKAVKLKSEAAETRYEENIQNRPLSAE----------KGFVGDNSKPLEKPP 62

Query: 328 FLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN 387
           F+ D IT H W+LFC+ P+ + + +VREFYAN+   +   V VRGV V  S  AIN++Y 
Sbjct: 63  FIEDVITQHNWQLFCAHPEDLIAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYG 122

Query: 388 LHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQ 416
           L D P   ++E   A +  +L      V I GA+
Sbjct: 123 LGD-PVDEHSEFVEAITEPELATVLETVAIAGAE 145

[Close]
BLAST of Spg024339 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 68.2 bits (165), Expect = 2.0e-07
Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 0 

Query: 320 PHFLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSL 379
           P F+   I  HGW  FC  P      +VREFYAN+ +     V V+ V V ++  AINS+
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 380 YNLHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQWRL 419
           + L +     Y + A   ++EQL     EV IEGA W++
Sbjct: 64  FGLEEVVDE-YVDFASEVTDEQLEVVLAEVAIEGATWQI 101

[Close]
BLAST of Spg024339 vs. NCBI nr
Match: XP_022845662.1 (uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris])

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-07
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 0 

Query: 319 LPHFLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINS 378
           L +FL D I + GWE F  +P  V+  +V+EFY N NE+E F+V V    + +   +IN 
Sbjct: 47  LENFLPDKIHSLGWEKFTEQPTAVSIPLVKEFYVNANEHENFKVFVWAFWIKFGSFSINR 106

Query: 379 LYNLHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQWR 418
            Y+  D P+  Y+ +        L++  R +   GA+W+
Sbjct: 107 FYHTQDIPNDDYSRL--RDEGVDLDEIIRTIARLGAEWK 143

[Close]
BLAST of Spg024339 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale])

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-07
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKN---GKDKGKGFSGD----LP 327
           +KR+   +      DSE  E           A YE  +KN   G +KG  ++ +     P
Sbjct: 3   IKRVARKASKAVKFDSEAAE-----------ARYEEHIKNQPLGAEKGFAWNNNEPLGQP 62

Query: 328 HFLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLY 385
            F+ D I  H W+LFC+  +     +VREFYAN+ + E   V V+GV V WS  AIN+L+
Sbjct: 63  PFIADVIIQHNWQLFCAHHEDPIVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLF 115

[Close]
BLAST of Spg024339 vs. ExPASy TrEMBL
Match: A0A2P5CXV1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-10
Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKNGKDKGKGFSGD------LPH 327
           +KR+   +       SE  E+  +E I+ +    E          KGF GD       P 
Sbjct: 3   IKRVTRKASKAVKFKSEAAETRYEENIQNRPLSAE----------KGFVGDNSKPLEKPP 62

Query: 328 FLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN 387
           F+ D IT H W+LFC+ P+     +VREFYAN+   +   V VRGV V  S  AIN++Y 
Sbjct: 63  FIADVITQHNWQLFCAHPEDPIVPLVREFYANMTNPDDDTVYVRGVQVLLSSEAINTIYG 122

Query: 388 LHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQWRL 419
           L D P   ++E   A +  +L      V I GA+W +
Sbjct: 123 LGD-PIDEHSEFVEAITEPELATVLETVAIAGAEWNV 148

[Close]
BLAST of Spg024339 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09
Identity = 52/154 (33.77%), Postives = 75/154 (48.70%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKNGKDKGKGFSGD------LPH 327
           +KR+   +       SE  E+  +E I+ +    E          KGF GD       P 
Sbjct: 3   IKRVAHKASKAVKLKSEAAETRYEENIQNRPLSAE----------KGFVGDNSKPLEKPP 62

Query: 328 FLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYN 387
           F+ D IT H W+LFC+ P+ + + +VREFYAN+   +   V VRGV V  S  AIN++Y 
Sbjct: 63  FIEDVITQHNWQLFCAHPEDLIAPLVREFYANMTNPDDDTVYVRGVQVPLSAEAINTIYG 122

Query: 388 LHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQ 416
           L D P   ++E   A +  +L      V I GA+
Sbjct: 123 LGD-PVDEHSEFVEAITEPELATVLETVAIAGAE 145

[Close]
BLAST of Spg024339 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-08
Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 0 

Query: 320 PHFLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSL 379
           P F+   I  HGW  FC  P      +VREFYAN+ +     V V+ V V ++  AINS+
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 380 YNLHDFPHAGYNEMAVAPSNEQLNDAAREVGIEGAQWRL 419
           + L +     Y + A   ++EQL     EV IEGA W++
Sbjct: 64  FGLEEVVDE-YVDFASEVTDEQLEVVLAEVAIEGATWQI 101

[Close]
BLAST of Spg024339 vs. ExPASy TrEMBL
Match: A0A2P5EYL5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-07
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKKNAEYETELKN---GKDKGKGFSGD----LP 327
           +KR+   +      DSE  E           A YE  +KN   G +KG  ++ +     P
Sbjct: 3   IKRVARKASKAVKFDSEAAE-----------ARYEEHIKNQPLGAEKGFAWNNNEPLGQP 62

Query: 328 HFLRDGITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLY 385
            F+ D I  H W+LFC+  +     +VREFYAN+ + E   V V+GV V WS  AIN+L+
Sbjct: 63  PFIADVIIQHNWQLFCAHHEDPIVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLF 115

[Close]
BLAST of Spg024339 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07
Identity = 48/153 (31.37%), Postives = 75/153 (49.02%), Query Frame = 0 

Query: 268 VKRIRTNSPSPPSTDSEKEESGNQEEIRKK--NAEYETELKNGKDKGKGFSGDLPHFLRD 327
           +KR+   +      ++E   +  +  I+ +  NAE    L N +  G+     LP F+  
Sbjct: 12  IKRVARKAHKAVKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQ-----LP-FIAQ 71

Query: 328 GITNHGWELFCSKPDPVNSQVVREFYANINENEGFQVIVRGVAVDWSPGAINSLYNLHDF 387
            IT H W+ FC+ P+     +VREFYAN+ + E   V VRGV V WS  AIN+++ L D 
Sbjct: 72  VITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD- 131

Query: 388 PHAGYNEMAVAPSNEQLNDAAREVGIEGAQWRL 419
           P   ++E     + + L      V   GA+W +
Sbjct: 132 PVDEHSEFIQNITQQDLITVLETVAAAGAEWNV 157

The following BLAST results are available for this feature:
BLAST of Spg024339 vs. NCBI nr
Match NameE-valueIdentityDescription
PON65868.19.4e-1033.76hypothetical protein PanWU01x14_113570 [Parasponia andersonii][more]
PON42276.12.1e-0933.77hypothetical protein PanWU01x14_283280 [Parasponia andersonii][more]
EXB53755.12.0e-0737.37hypothetical protein L484_022412 [Morus notabilis][more]
XP_022845662.12.6e-0733.33uncharacterized protein LOC111368573 isoform X1 [Olea europaea var. sylvestris][more]
PON90635.12.6e-0735.48hypothetical protein TorRG33x02_134920 [Trema orientale][more]
BLAST of Spg024339 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg024339 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5CXV14.6e-1033.76Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE... [more]
A0A2P5B0K01.0e-0933.77Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE... [more]
W9QTD99.5e-0837.37Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1[more]
A0A2P5EYL51.2e-0735.48Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV... [more]
A0A2P5BCG41.6e-0731.37Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
BLAST of Spg024339 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..228

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024339.1Spg024339.1mRNA