Spg024306 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024306
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold4: 18849077 .. 18854120 (+)
RNA-Seq ExpressionSpg024306
SyntenySpg024306
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGGTACCCTTTAATGGCGGTCAGGGTAGGTAACTTTAGGAAAAACTAGGTCACTTTTCTGAGTTTCTCTCTCCCCGATTATATCTTCGCTCTCGGTTTTCTCCGCCGCTCTCCCTCACCATTTTCGTCATTCTCTTTTCCCAAATCTCTTATCCCTCGCCATTCATCGCCATTTTCGTGGGTTTTTTCTCTTTGCTGCCGTCTCATCGTCGTCGTTCTCGCCATCCTCGTCGTGGGTTTTTCTCCTAAGAACAGTGGGTTCTCGCGGTCCTCGCCTGTGTTCTCGGTTCTCATCGTGGGTGTTTAAAAGCTCGTCGTTCTTCCATTCGCCGTGATGGGTGTTATCACTGTCGTGGATGTTATCTCTATATTCTCCATTATCGCTGCCGGAGCGTCATGGGTTTTTCTCCGTCGGACCACCACTGTTCTACGCTATCTTCGTGGGTGTTATATGAAGTTGTTCTGCTTCGTGGGCGTCTCTGGGCTGTAAGAAAATCAAGTATTCGTGGGCGTTTTTCAGAGTTGCTCCCTCATTTAGGGAACATATGGTGGATTTGGTATGTGGTTGTAGCAGAAGGGGCTTTCTCAAATTGCTGTCTGTTTCACTTTCACTGTTTTATCATTATATTGCCATAATTTGTCCATGAAATGCTTCTTTTAGGAGCACTAAAAAAAAGCTAACTATATAGATGTTGTGCTAAACCTAACTATTTTTTCACCTTTTGATAATTTAATCGCTTAAATTTCTCTTTATTCTCTACTGGATTTTGGAAATTTGGCTTTGTTTGAGCATTTTCTTGTAATTTTCTCACTTGGGTTTGGCTGAAATATGGACAAGCTAGGTTTCATTGAATTGGCTCGACCAAATTGGCACAACGCAATTTCTAAGAAACCTCATGATCCACATTCCCAACCCTTCATTTTGATTGTTGTGTACTTGTTGTATGTTGCTAATGTGACATGTAAAATAAACAAAGGAAATTGATTTATCATGCGGTTAGCTAAAAATTATCATAATGGTTTATTATGACTGGTTAAGGATATTGTTGAATTTATAGCTACAGCATGGGTTGGTTAACAAAATGAGCAAGTAATCTTTTACAGAAATAGTTTTCAAAGGTGAAGGGTAGTTGAATATATAAATACTTGGATCATCTCCCATGGGTTCATTTGTGAGAAATTAGCTCTGTTGAATCCTTTGTCAAGAATCTCTTTTGCTTCAAGAAGCGGATGTCCTCTTCAGTGAGTGAATGCTTCAAGAAACCGATTGTCTTCTTCAAGTGACTGAAAGTTTAATTTGTGAGGGGGTTCATCACCATACTTGTTCTCTGTTTTTTGTTTGAAGCCTTATTGTAATTGATTTTCTGGAAAGATTTTTCAATAAAAGCTTGAGTGGTATTTCCACAGTGGATGTAGACATCTTGTTGAACCACTGTAATTTTGGTGTCTCTTTCTTCTTAGCTTATTCTTTACACTTATCTTTACTTGTATTCAAGGTGTCCTTTCTACTACACTACATATAGTTCATGTGGGTTTCTTTAACTAGATTTCATTTAATTTCCTTCATTCGAATGAATTTATATCTAATACATGTTTCTATTGGTTGCTCATATAAATTGGTGTACTTTGCAAATAAGATTATTTACATTGCTTCATTGAAGAAGTTTCTTCTAGAGAGTATTAAAGTCGAGGGAAGGCTGGAGATCTTGGCAATGTCGTCTCTGGAGCTCTTCATTTACTAAATCCTAAATCAACTGAGTTTATTTATTTGGGTATTGAAATGTGAGAGGTAGTTTAAATAATAGTATATACTTGCCTTGATTTTCTGAATCCTAAAGTTTATCTAATTGGTTATTGAAATCTGGGGACGAGGGGTTAGTTTGAATAATATAATTAAGATGTTGAAAGTTGAAGGTGGCAGGGTACACAAAAGAAAAAGGCCAAAATCTTCTTTGAATTAAGCTGATTTCATTGTTATCTTGTTTTTTGTTTAGTTTAAATATAGTATAACAAGATTTCATTGGATTGAGATGATTTAGAGTGGTAAACACTAAATGTTGAGTATGTGAGCTGGGATTTTGAGGCTTTTTTGTTTTTGTTTTCAAATGGCCAGACATACTGGTTAAAAGAGTCAATTCAAGAGCTACATCATCTTACTAGACTTTGACTTGACAAATTTGGTAAAATGTAACGGGGGAGTTAATTGGTTTACGGAGAAATGTTATTGTCTTTTATTATCAAACTTGCTTTATTTTATGTTATTATATATGGACTTTCAGAGAATGAGATTATTTAATGGCTAGACAACACTTTCCTTTTCTTTTCTGAAAGGAGTTATAAGAATTGTGATGTCAGCCATTTCTTTTGAATATGTAAACCTATGAATACAATCCCTATTGTTAGTTTAACAATGTTGTAATTTGGTATTTGATATTATTTTGCTAACTTTCTTGCACACAGGGAAGGAAGCTGGAATGTTTAATTACTTTCTTCTCATTTGAGTTTGAAACAAAAGAAATGTCGTATCTCAGAAATGGATGACAGGTAAGACAATCAAGTTTATATGCTAAAGAGTAATATATTCCTAAGCTTCGCTCATAATTTTTGCATTTTGAATGATCTCTTATTTATCCCTTTTTAGGCCCTTTCTATTTAGTTTTGTGTGTGAAGCACCAAACTGTGGTATCATTTTTCCTTGAGAAAAGGCTAACATAATTTAAATGGAATATGTGCAAACTGTAAATGGTTCGGTCACTCATTCCTTTGAACAGCTTCAACTTTGTAGGACAATTCCTTTTGCTTAGAATCTCTTAACTGCTAGTTATGTTGAACTATATGGGTATGCACTTGTCTCACTTGTCTCATTTAAATGTTGTGGAAATTTAATGAAATAGAAAAGGACGTTCAATTATCAGTGAGTTTGGAGATAGTAAAATGTAACTAAGTCTAGAGTAGATTCCTTGCTATCAAGATTTGGCATGTGAGAGGAAGTGTCAGAGAATACAAGACTGTGGACGCCATGCTTGTAGACGTCGCTGCTGTGATGGTGACTGCCCACCCTGTTCAGAGGTTTCTATTGCTGTCTTTGGCTTTCACATTCAGTTCTGCATGTCTCTGGAGGATTATTAACTTTTCAAAATTTTAGATTTGTGGCAGGAGGCTGCGATGTAAGAACCACAAATGTTCGTCCCCATGTCATAGGTAAGTCATTGTTATCATTATATCTTAGGATTGTTTAGAGTACTAATATGTGTATGATGTTTGGACTTTGGAACATCATTCTGATGTATTTTTCCATCTGAAAAGTTACGCCCTGTTGATTAAATAGCTGCTTCTTAGAAATAACTAAGAGCTTAATTGATTGAGTGTTTCTCTAAATAGTAACCCTTTTAACAAATTTTGTTCGGGATGTTTTGGTTTAATCTAATTGAAATTTGTTTTTCTTAGGTTCTTCAAGATCGATGTACACGAGCAAGATTATGCCGAAAAGAATGGAAGCTGCATGTAGGAGAATTTTGTTTTTCTTAAGTAGGCTTTTAATTATAGGTGCTTTCAAGTGTAGGTGCTTTGAATTTTTCAAAAAAAAAAAAAAGTGTAGGTGCTTGTAATTTTCCTTTTTTATATCAAACTTGTATGAGCAAAAATTGTATGAACAAATTTTATTAATGAAGAAAATATTGTTGGTATGCCACCGGGCAACCAACAATTTTTTTTATTAAATTATGAACGAAATGATGACGGGCAATGCCTGTCATTAAAAAAGATATTTAATGACGGACTTTTAATGACGGACATTTGGTTGGAAAATACCCTTTTAATGACGGACTTTTGATGACGGACGCCTTTTAATGACGGGCATTGCCCGTCATAAAAAATGTCCGTCATTGTACCTTTTCATGACGGACGATTTTTAATGACGGGCATTGCCTGTCATTAAAAGTCGCCCGTCATGAAAAGTTACCACGACACTCGTATAGACGACGGACTCCGCCCGTCATTAAAGGTCTTTAATGACGGGCAATGCCCGTCATTAAAAGCGATTTTTGTAGTAGTGATTGGAAATCTTGAAGAGACTGGAGGAAAAGAAACAGTGCAGTGTGGATGGAGAAAGAAAGTTTTAAAGAGAGATCGACGGAGGCTAAATGTCAGCCCTGCCAATCGCCATAAAAACACTAAGTTGGAACGTTCAAGGGTTGAGAAATCCTCGAACAGTCTGCAATCTTTGCCTAGAGATAGGCAAAATAAATCCTCAACTAGTATTTCTTATGGAAACAAAAAGCAAAACATAAAGTGGAGGAGAAGAGGAAAAAAGATTTGAATTTTGACCACGGTTATAGTGTCCCAAGTGTGGGTAACAGTGGCGGCTTGCTACTCCTCTGGAAAGAAGGTCTCTCCGTTAACATTTTGTCGTCTTCCAAAGGACATATTGATGCCACTATTCAAAGCAATGAAGGTTGGTGGCGTTTCACAGGATTTTATCCAAGAATGAGAGAGGAATCACAAGAGCTCTTAAAAAGACTCAAGAAAGTTTCTAGTCTCCCCTGGCTGATAGGGGGAGACTTTAATGAGCTGATGTTTATGGATGACAAGGAGGGAGGAGGTAGGAAAGATCGAAAGCTAATGGACAATTTTTGCAATACTCTGAATTCTTGCCATCTGACTGTTCCAGGGTTTAATGGTCCTGGAACAGTCAGATGGCAAGAATTCATAAAACTAACTAGAGATAAGGTAAATATAAAACTAACTAGAGATAAGGTAAATATAAGGAAAAACTCAATTCTGCCGAAAATCGCACGTCCCCATCACGATCTCCACACGTTCTTGAGTGATTCTCGCTCCTTGGCCTTGCTTCAACTCCCACAGAAGGTCTCCAATCGATTTTAGGTCTAAACACTTCCAAATTGAACTCCCCTTGGTCGTGCAAGAATAAGATGTAATTATAGAAAATCTGTCGACAGCGTCTCGATGCTGTCCTGATTATCGCCCAAATCAGATATGGTTCTTTGCATCTCGGCGCTACCTCTCGGGTTTGCCACTTTTGA

mRNA sequence

ATGCTTGTAGACGTCGCTGCTGTGATGGTGACTGCCCACCCTGTTCAGAGGTTTCTATTGCTGTCTTTGGCTTTCACATTCAGTTCTTCAAGATCGATGTACACGAGCAAGATTATGCCGAAAAGAATGGAAGCTGCATTGGAGGAGAAGAGGAAAAAAGATTTGAATTTTGACCACGGTTATAGTGTCCCAAGTGTGGGTAACAGTGGCGGCTTGCTACTCCTCTGGAAAGAAGGTCTCTCCGTTAACATTTTGTCGTCTTCCAAAGGACATATTGATGCCACTATTCAAAGCAATGAAGGTTGGTGGCGTTTCACAGGATTTTATCCAAGAATGAGAGAGGAATCACAAGAGCTCTTAAAAAGACTCAAGAAAGTTTCTAGTCTCCCCTGGCTGATAGGGGGAGACTTTAATGAGCTGATGTTTATGGATGACAAGGAGGGAGGAGGTAGGAAAGATCGAAAGCTAATGGACAATTTTTGCAATACTCTGAATTCTTGCCATCTGACTGTTCCAGGGTTTAATGGTCCTGGAACAGTCAGATGGCAAGAATTCATAAAACTAACTAGAGATAAGCGTCTCGATGCTGTCCTGATTATCGCCCAAATCAGATATGGTTCTTTGCATCTCGGCGCTACCTCTCGGGTTTGCCACTTTTGA

Coding sequence (CDS)

ATGCTTGTAGACGTCGCTGCTGTGATGGTGACTGCCCACCCTGTTCAGAGGTTTCTATTGCTGTCTTTGGCTTTCACATTCAGTTCTTCAAGATCGATGTACACGAGCAAGATTATGCCGAAAAGAATGGAAGCTGCATTGGAGGAGAAGAGGAAAAAAGATTTGAATTTTGACCACGGTTATAGTGTCCCAAGTGTGGGTAACAGTGGCGGCTTGCTACTCCTCTGGAAAGAAGGTCTCTCCGTTAACATTTTGTCGTCTTCCAAAGGACATATTGATGCCACTATTCAAAGCAATGAAGGTTGGTGGCGTTTCACAGGATTTTATCCAAGAATGAGAGAGGAATCACAAGAGCTCTTAAAAAGACTCAAGAAAGTTTCTAGTCTCCCCTGGCTGATAGGGGGAGACTTTAATGAGCTGATGTTTATGGATGACAAGGAGGGAGGAGGTAGGAAAGATCGAAAGCTAATGGACAATTTTTGCAATACTCTGAATTCTTGCCATCTGACTGTTCCAGGGTTTAATGGTCCTGGAACAGTCAGATGGCAAGAATTCATAAAACTAACTAGAGATAAGCGTCTCGATGCTGTCCTGATTATCGCCCAAATCAGATATGGTTCTTTGCATCTCGGCGCTACCTCTCGGGTTTGCCACTTTTGA

Protein sequence

MLVDVAAVMVTAHPVQRFLLLSLAFTFSSSRSMYTSKIMPKRMEAALEEKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQSNEGWWRFTGFYPRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKLMDNFCNTLNSCHLTVPGFNGPGTVRWQEFIKLTRDKRLDAVLIIAQIRYGSLHLGATSRVCHF
Homology
[Close]
BLAST of Spg024306 vs. NCBI nr
Match: XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber])

HSP 1 Score: 129.0 bits (323), Expect = 4.9e-26
Identity = 71/167 (42.51%), Postives = 92/167 (55.09%), Query Frame = 0 

Query: 39  MPKRMEAALEEKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQS 98
           M  ++     EK     NF   + VPSVG SGGL L WKEGLSV +L S + HID  ++ 
Sbjct: 1   METKLNKEKTEKVWDQCNFRCSWVVPSVGKSGGLALFWKEGLSVEVLDSDQSHIDTVVKG 60

Query: 99  --NEGWWRFTGFY----PRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRK 158
             +  WW  TGFY       R+ES  LLKR++  S LPWL  GDFNE+ +  +KEGG  +
Sbjct: 61  GVSSDWWHLTGFYGSPDTSRRDESWGLLKRIRDRSELPWLCIGDFNEIFYESEKEGGSSR 120

Query: 159 DRKLMDNFCNTLNSCHLTVPGFNGPG-TVRWQEFIKLTRDKRLDAVL 199
            R+ M NF +T+N C L   G+ GP  T  +Q        +RLD  L
Sbjct: 121 MRRQMKNFFDTINWCGLRDLGYVGPNFTWLYQRADGFQIRERLDRAL 167

[Close]
BLAST of Spg024306 vs. NCBI nr
Match: XP_023903659.1 (uncharacterized protein LOC112015491 [Quercus suber])

HSP 1 Score: 128.3 bits (321), Expect = 8.4e-26
Identity = 68/145 (46.90%), Postives = 88/145 (60.69%), Query Frame = 0 

Query: 38  IMPKRMEAALEEKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQ 97
           +M  ++  A  +  K+ L    G  VPS+  SGGL+LLWK+ LSV++ S S+ HIDA + 
Sbjct: 34  LMETKLVVAEFDSIKEGLKRSQGLVVPSIRRSGGLVLLWKKELSVSVQSYSESHIDAIVN 93

Query: 98  SNEG--WWRFTGFY----PRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGR 157
            N+G   WRFTGFY       REES  LLKRL   +SLPW+  GDFNELM   +KEGG  
Sbjct: 94  QNDGSQKWRFTGFYGNPDTSRREESWVLLKRLSSNNSLPWVCAGDFNELMHSGEKEGGRS 153

Query: 158 KDRKLMDNFCNTLNSCHLTVPGFNG 177
           +  + M NFC  +NSC L   G+ G
Sbjct: 154 RPVQQMANFCEAINSCQLRDLGYIG 178

[Close]
BLAST of Spg024306 vs. NCBI nr
Match: XP_030969682.1 (uncharacterized protein LOC115989960 [Quercus lobata])

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-25
Identity = 76/177 (42.94%), Postives = 101/177 (57.06%), Query Frame = 0 

Query: 47  LEEKRKKD--------LNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQS 106
           +E K KKD            + + VPSVGNSGGL+LLWKE L V++ + S+ HIDA +  
Sbjct: 35  METKLKKDWLVLIKEKCKMKNCFVVPSVGNSGGLILLWKEELKVDVRTFSQNHIDAWVNG 94

Query: 107 NE-GWWRFTGF----YPRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKD 166
            E GWW  TGF    Y   R ES   LK LK  +SLPWL+ GDFNE+M + +KEGG  + 
Sbjct: 95  GEVGWWHLTGFYGHPYTAKRHESWAKLKHLKSTTSLPWLVIGDFNEIMGLSEKEGGSIRP 154

Query: 167 RKLMDNFCNTLNSCHLTVPGFNGPG-TVRWQEFIKLTRDKRLDAVLIIAQIRYGSLH 210
           RK M +F +T++ C L   GF G   T  +Q    +   +RLD  L  A + + SL+
Sbjct: 155 RKQMADFVSTIDHCGLCDLGFIGSKFTWLYQTTSGIQIRERLDRAL--ATLEWMSLY 209

[Close]
BLAST of Spg024306 vs. NCBI nr
Match: XP_023871998.1 (uncharacterized protein LOC111984613 [Quercus suber])

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-25
Identity = 66/131 (50.38%), Postives = 82/131 (62.60%), Query Frame = 0 

Query: 52  KKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQSNEG--WWRFTGFY 111
           K+ L    G  VPS+  SGGL+LLWK+ LSV++ S S+ HIDA +  N+G   WRFTGFY
Sbjct: 48  KEGLKRSQGLVVPSIRRSGGLVLLWKKELSVSVQSYSESHIDAIVNQNDGSQKWRFTGFY 107

Query: 112 ----PRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKLMDNFCNTLN 171
                  REES  LLKRL   +SLPW+  GDFNELM   +KEGG  +  + M NFC  +N
Sbjct: 108 GNPDTSRREESWVLLKRLSSNNSLPWVCAGDFNELMHSGEKEGGRSRPVQQMANFCEAIN 167

Query: 172 SCHLTVPGFNG 177
           SC L   G+ G
Sbjct: 168 SCQLRDLGYIG 178

[Close]
BLAST of Spg024306 vs. NCBI nr
Match: XP_024021734.1 (uncharacterized protein LOC112091706 [Morus notabilis])

HSP 1 Score: 125.2 bits (313), Expect = 7.1e-25
Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 0 

Query: 38  IMPKRMEAALEEKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQ 97
           +M  R+ +   E  K+   F  G+ V   G SGGL+L+WKE + V+I S S+ HID  ++
Sbjct: 34  LMETRLRSKAAESVKRRCGFHGGFYVDCSGRSGGLMLMWKEEVEVHIQSYSQSHIDCHVR 93

Query: 98  SNEG-WWRFTGFYPRM----REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRK 157
              G WWRFTGFY       R  S  LL RLK +S+LPW++ GDFNE++F+  KEGG  +
Sbjct: 94  FPHGVWWRFTGFYGNPSRSDRHHSWTLLLRLKSLSNLPWVVAGDFNEILFLSKKEGGNNR 153

Query: 158 DRKLMDNFCNTLNSCHLTVPGFNGP 178
               M+ F +T+ SC L   GF GP
Sbjct: 154 YYPSMNQFRDTVESCDLVDLGFVGP 178

[Close]
BLAST of Spg024306 vs. ExPASy TrEMBL
Match: A0A5C7I5K8 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010806 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.0e-24
Identity = 59/141 (41.84%), Postives = 85/141 (60.28%), Query Frame = 0 

Query: 42  RMEAALEEKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQSNEG 101
           +ME    EK ++ L +  G+ V S+G+SGGLLLLW E  +V++ S S GHID  IQ  +G
Sbjct: 516 KMERNRAEKIREALGYKGGFGVDSIGSSGGLLLLWNEDCNVSVQSFSVGHIDVRIQVRDG 575

Query: 102 -WWRFTGFY----PRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKL 161
            WW+F+G Y    P  R     L++RL++V  LPW+  GDFNEL+ + +K GG +K  + 
Sbjct: 576 PWWKFSGMYGEPNPNKRPNFWNLIRRLREVDWLPWMCAGDFNELLSISEKSGGSKKTIRD 635

Query: 162 MDNFCNTLNSCHLTVPGFNGP 178
           +  F   +  C L   GF+GP
Sbjct: 636 IIKFRQVVEDCDLIDLGFSGP 656

[Close]
BLAST of Spg024306 vs. ExPASy TrEMBL
Match: A0A7N2REL6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-23
Identity = 63/143 (44.06%), Postives = 83/143 (58.04%), Query Frame = 0 

Query: 63  VPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATI--QSNEGWWRFTGFY----PRMREES 122
           VPS G SGGL L WKEG+ ++I + S+ HIDA +  +   GWW  TGFY       R ES
Sbjct: 5   VPSEGKSGGLALFWKEGIKLDIQTYSQSHIDALVHGRGEVGWWHLTGFYGDPDTNKRPES 64

Query: 123 QELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKLMDNFCNTLNSCHLTVPGFNG 182
              L+ L K S LPWL+ GDFNE+  + +KEGG  + R+ M NF +T+N C L   G+ G
Sbjct: 65  WRKLRYLSKTSDLPWLVIGDFNEITSVFEKEGGSDRPRQQMGNFVDTINWCSLKDLGYTG 124

Query: 183 PG-TVRWQEFIKLTRDKRLDAVL 199
           P  T  +Q    +   +RLD  L
Sbjct: 125 PKFTWLYQTAAGVQIRERLDRAL 147

[Close]
BLAST of Spg024306 vs. ExPASy TrEMBL
Match: A0A5C7HJN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018377 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23
Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = 0 

Query: 42  RMEAALEEKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQ-SNE 101
           +++  + +  KK L F++G+SV   G SGGL+LLW     V++LS SKGHID  ++   E
Sbjct: 28  KVKGVIAKSAKKRLGFENGFSVDCSGKSGGLILLWNSDCKVSLLSHSKGHIDVRVERDGE 87

Query: 102 GWWRFTGFYPRM----REESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKL 161
             WRF+GFY  +    + +S ELL+RL+ V    WL GGDFNE++ + +K GG  K    
Sbjct: 88  PTWRFSGFYGCLNQINKRDSWELLRRLRSVDDFSWLCGGDFNEILRVKEKSGGSNKSILG 147

Query: 162 MDNFCNTLNSCHLTVPGFNGP 178
           +  F   ++ C+L   GF GP
Sbjct: 148 ICQFREVIDDCNLVDLGFEGP 168

[Close]
BLAST of Spg024306 vs. ExPASy TrEMBL
Match: A0A5C7H399 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023915 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.5e-23
Identity = 69/166 (41.57%), Postives = 94/166 (56.63%), Query Frame = 0 

Query: 49  EKRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQSNEGW-WRFTG 108
           E+ +  L+F+    V SVGNS GLLLLWK    V ++S S GHIDA +   +G+ WRF G
Sbjct: 463 ERIRVSLDFNGSLCVDSVGNSDGLLLLWKHSNKVLVVSFSSGHIDARVCKEDGFLWRFIG 522

Query: 109 FY----PRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKLMDNFCNT 168
           FY       R  S  LL+RLK +++LPW+ G DFNE + M+DK GG       M  F   
Sbjct: 523 FYGEPNASKRHVSWALLRRLKDINNLPWVCGSDFNERLSMNDKVGGSNSSVSSMIQFRQV 582

Query: 169 LNSCHLTVPGFNGPGTVRWQEFIKLTRD---KRLDAVLIIAQIRYG 207
           ++ C+LT  GF GP ++ W   I+  RD   +RLD  L +  +  G
Sbjct: 583 VDYCNLTDLGFFGP-SLTWNN-IRDGRDNIQERLDRFLYLKMVCLG 626

[Close]
BLAST of Spg024306 vs. ExPASy TrEMBL
Match: A0A5C7I4W9 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010516 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-22
Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = 0 

Query: 50  KRKKDLNFDHGYSVPSVGNSGGLLLLWKEGLSVNILSSSKGHIDATIQSNEG-WWRFTGF 109
           K ++ L ++ G+ V S G SGGLLLLWK    V +LS S GHIDA I  + G  WRF+G 
Sbjct: 59  KIREVLEYEGGFGVDSSGRSGGLLLLWKNHCKVLVLSYSAGHIDARIHEDNGLQWRFSGI 118

Query: 110 Y----PRMREESQELLKRLKKVSSLPWLIGGDFNELMFMDDKEGGGRKDRKLMDNFCNTL 169
           Y    P  R  +  L++RLK+V +LPW+ GGDFNEL+ M +K GG  K  + +  F   +
Sbjct: 119 YGDPNPSNRMNTWTLMRRLKEVDNLPWVCGGDFNELLSMSEKLGGSEKAIRDIIRFRQVV 178

Query: 170 NSCHLTVPGFNGPGTVRWQEFIKLTRD---KRLDAVL 199
           + C     GF+GP    W   ++  RD   +RLD +L
Sbjct: 179 DDCEFIDLGFSGP-KFTWNN-MREGRDNVQERLDRIL 213

The following BLAST results are available for this feature:
BLAST of Spg024306 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023897447.14.9e-2642.51uncharacterized protein LOC112009345 [Quercus suber][more]
XP_023903659.18.4e-2646.90uncharacterized protein LOC112015491 [Quercus suber][more]
XP_030969682.11.1e-2542.94uncharacterized protein LOC115989960 [Quercus lobata][more]
XP_023871998.11.9e-2550.38uncharacterized protein LOC111984613 [Quercus suber][more]
XP_024021734.17.1e-2543.45uncharacterized protein LOC112091706 [Morus notabilis][more]
BLAST of Spg024306 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg024306 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5C7I5K85.0e-2441.84DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010806 ... [more]
A0A7N2REL63.2e-2344.06Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A5C7HJN14.2e-2340.43Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018377 PE=4 SV=1[more]
A0A5C7H3995.5e-2341.57CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02391... [more]
A0A5C7I4W91.6e-2242.04RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010516 ... [more]
BLAST of Spg024306 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 40..205
e-value: 1.0E-8
score: 37.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 56..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024306.1Spg024306.1mRNA