Spg024280 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024280
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	GTP-binding protein SAR1
Location	scaffold4: 20910839 .. 20913953 (+)
RNA-Seq Expression	Spg024280
Synteny	Spg024280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCTCCAGCATCAGACAACTTGAAAATGTACTTCCTCACGTGATAGCTCCAACGCCTGTGACATAAGATAGCCTGGGCAAGAAATAAAGCTACAGTATATGCGTTAGATGAATAATTTTTTTGCATTTTTCCCGCCGTATCATGGAATCTCACTCTTAAACAAAAACCATCGCAAATCTATGATATTATGCCCTGATCCGCACATCACTTATCTTTTCTAGTCTTTTTTAATTTAAATTTATGTGAGAAATAACTTGATTTTTTCCAGTTATCAGGGTCCTAGTAAAATAAAATTTATATCAACGACACTCAAACTACGTCTGTAGTAATAGTGGTCGGGGTCGAACACAGGGAAGGGGATTTCTAGTACAGCACTGGTTTTTGTGCAGAACACAAACATGGGGTGAAAATAAAACGCGAAGGAATAAAGTAAAAGACAGAGTGCAAATTTAAGTTAAATAAAACGGAGGATCGTTGGGTTGGGGGTTCGATGCTTGAATGGTATAATACAATGGCTTCCTAGTTTTCTCTAAAAATAACTTCATGCATTTTAAATTGACCCTGGTAGTGCTTCTTGGTTACTCAGAGGAGCCTCCTAACTAACCAATGTTTAGTTAATTAATTACCCTAGGATCCTGCAGCTAATCTAATTAATTAACTTAAGAAATTCGCCTGCTACCCCACATGCATAGCCCGATAATCATCAAACTATATCTAAATAATTTAAAATAAACAACCCGAGATCTCGTGATTGCTTACGAAAATTAATCGCTCTAAACACAAGGGTCTGGAATTGAGTTAATTAAAAAGAATAAAAATTCATATTTAATTAAATCAACTTTTAACATGTATCTTAGGCTTATCAAGAATCTACACTAAACATGCTAGAATAGTGATGGACTTGCCTCGGCCTAGTGGCTATCTCAAATAACTGATAGAATGCACAAAACCAAATTCAAAGAGGCGTCAATTCTAAGAACTCAATAACATGCATTGGCTTAAACAAGATTACATGGAAAAGCATCAAATAAACAACAAGAAATTCATTCATGAACAAGAAAACTCAACCAATGCATCAATTCATTCCAAAAAAAAATCTCAAATCCAATGATTCTATAAAGATTAGTTACTCATAGATGAAGGGAAACAACAATAAACCTCAAAAGAATACATAAGAAACAACCCAAAAAGGTCTAAACTACTAAGAAAACAAAAAGAGGACGACAAAAATCGTAAAAGTATGAAGTTTCTAACCTAAGGCCGACTAAACCAGGCCCTAATATATATACTAATCGTTGTAGCGTCGAGACGCTAGGAAAATAGCGTCGAGACGCTACGGTACTGCCTTCCTTGTAAATTTAGCGTCAGCGTCAAGATGCGAGACGGTGAGCCCTTTTCCAGTTTGCTGCCTTTTTTTCGTTTGCTTCATTTGGGGCTCGAACCTTTGACCTCTTAGTGCTTCTTTTCAGGCCCGTCATGGTTCACTTGGGTCTTTTTACCTTTTCGCTGTCCATGGACCTCGAGATGGCTCAAAAATGCCTTAATCGGCTTGAATTAACACCAAGATGCGTGGTTGGCTCCCAACAAGCTTAGATTAGCGGTAATAAGATAGCACGAATTAGATGCTATCAATTAGGGGTGCAAAGAACCAAACTGATCCACCGAACCGAACCGAACCAATTCGGTTTGGTTCAGTTTTCAAGTTTATTTGTGACCGAACCGAATCGGAAGGTTCGGTTCGGTCCTTGCATATTATTGGCCCGAACCGATATACGCAGTGAGCCTGTCGTCTTCACTCTTCAGCGCTTTCTCTCCTCTCGTGCTCGTTCTTGTTGTCGTGTCGCATCTTCTTCTTGTTTGAAGCTTTGCTCGTTCCGTCAGTCGCATCTTCTTCTTGTTCGAAGCTCTTTGTCGTGTCGATTTTCAGTCCTCACATCGTAGTCGCAGCTTTGCTCGTGCTTGCTCAGCCTTCGAAGTTTCCTCTCCTCTCAAAGTTTAATTGTTGATTTTGGTAATTTCTTTCCCCTATTTCCTTTTCATTATGTGATTCCATGGACCCTATTGATTTCTATTGATTTCTTGGAAAAACTCTGCTCAACCCTTGAATTTTTTCCTTTTTTTTTCTTCTCGTCCCCCTCAGAAAAGTCAGTTTGTATTTAATCAATGGACCCTATTGATTTCTATTTCTTGTAAAAACTCTGCTCAACTCTGTTCTTCCTCTTTTTAGATTTGATGGGGTGCTTTTGTTTCGAATAATGTGTTTTCATTCACTATTTCATCAATGTTTTTGGTTTTTTGTTTTTGGGCATTGAGGCATTTTGCCTATTTTTCGTTCTTCCTTTGGCTTTCCCTTTTCATTTTGTCTCTTGCATCTTCTTCTTTAAAACCATTGATTGCTTCTGAAATAATGTACTGAACCTTGCCTGGAAATTTTTAGTGACACTGATCTACATAGGTAAATAAAATTATAAGCCTCTATCTGTATCTGATATTTGTCACATATTTTCTAGGACAGTCTCCTTTGTTTGAAGTTAAATCATACTGGATAAAACTTAAAAAGGGAACAAGAAAGTAGTAGATTATAAACCATGCATATAATGTTACAAGATCATTTGTCCGCTGACTCTGACTTATGAAGTACAAGCTATCTGTTTTGAACTGTTTTATTTGCTATCATATGATCTTATATGATATTAGCTGAGTTCATCTAGCCCTGTGTTGCTCGCATTGTGTAGTTGGTTCTTTATCATGTCAAAACTTTTTGCTAAATATGTTGTCGTTAAGTGAAGGTGGATGTCGCAGTTTATCTGGTGGACCCATATGACAAGGAGAGATTTGCAGAGTCCAAAAAACAGTTGGACGCACTCCTCTCCAATGAAGCATTAGCTGATGTTTCATTTCTGATTCTGGGTAATATGATTGACATTCCAATATGCTGCATCAGAAGACGAGTTACGGTACATCTTAGGTCTAACAAACTTCACACAGGCAAGGGCAAGGTAAGCCTAGCTAACTTGAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTTAGGAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG

mRNA sequence

ATGTCAGCTCCAGCATCAGACAACTTGAAAATCTTTGCTCGTTCCGTCAGTCGCATCTTCTTCTTGTTCGAAGCTCTTTGTCGTGTCGATTTTCAGTCCTCACATCGTAGTCGCAGCTTTGCTCGTGCTTGCTCAGCCTTCGAAGTGGATGTCGCAGTTTATCTGGTGGACCCATATGACAAGGAGAGATTTGCAGAGTCCAAAAAACAGTTGGACGCACTCCTCTCCAATGAAGCATTAGCTGATGTTTCATTTCTGATTCTGGGTAATATGATTGACATTCCAATATGCTGCATCAGAAGACGAGTTACGGTACATCTTAGGTCTAACAAACTTCACACAGGCAAGGGCAAGGTAAGCCTAGCTAACTTGAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTTAGGAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG

Coding sequence (CDS)

ATGTCAGCTCCAGCATCAGACAACTTGAAAATCTTTGCTCGTTCCGTCAGTCGCATCTTCTTCTTGTTCGAAGCTCTTTGTCGTGTCGATTTTCAGTCCTCACATCGTAGTCGCAGCTTTGCTCGTGCTTGCTCAGCCTTCGAAGTGGATGTCGCAGTTTATCTGGTGGACCCATATGACAAGGAGAGATTTGCAGAGTCCAAAAAACAGTTGGACGCACTCCTCTCCAATGAAGCATTAGCTGATGTTTCATTTCTGATTCTGGGTAATATGATTGACATTCCAATATGCTGCATCAGAAGACGAGTTACGGTACATCTTAGGTCTAACAAACTTCACACAGGCAAGGGCAAGGTAAGCCTAGCTAACTTGAACGTTCGTCCTCTCGAGGTTTTCATGTGTAGCATTGTTAGGAAAATGGGTTATGGGGATGGTTTCAAATGGCTTTCTCAGTACATTAAGTAG

Protein sequence

MSAPASDNLKIFARSVSRIFFLFEALCRVDFQSSHRSRSFARACSAFEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK

Homology

[Close]

BLAST of Spg024280 vs. NCBI nr
Match: XP_042992772.1 (GTP-binding protein SAR1A isoform X2 [Carya illinoinensis] >KAG2693346.1 hypothetical protein I3760_08G091900 [Carya illinoinensis] >KAG6644990.1 hypothetical protein CIPAW_08G090600 [Carya illinoinensis] >KAG6700031.1 hypothetical protein I3842_08G091300 [Carya illinoinensis] >KAG6700032.1 hypothetical protein I3842_08G091300 [Carya illinoinensis] >KAG7967210.1 hypothetical protein I3843_08G087700 [Carya illinoinensis])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 80/107 (74.77%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+EALADV FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKKELDALLSDEALADVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
                 TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKWLSQYIK
Sbjct: 147 GLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 193

[Close]

BLAST of Spg024280 vs. NCBI nr
Match: MBA0583939.1 (hypothetical protein [Gossypium raimondii])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 47  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVH 106
           F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  H
Sbjct: 5   FQVDAVVYLVDAYDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEDELRYH 64

Query: 107 LRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
           L      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 65  LGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 112

[Close]

BLAST of Spg024280 vs. NCBI nr
Match: XP_042988256.1 (GTP-binding protein SAR1B [Carya illinoinensis] >KAG2695757.1 hypothetical protein I3760_07G027600 [Carya illinoinensis] >KAG6646733.1 hypothetical protein CIPAW_07G028400 [Carya illinoinensis] >KAG6702328.1 hypothetical protein I3842_07G029100 [Carya illinoinensis] >KAG7969367.1 hypothetical protein I3843_07G028100 [Carya illinoinensis])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 80/107 (74.77%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEEELRFHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
                 TGKGKVSLA+ NVRPLEVFMCSIVRKMGYGDGFKWLSQYIK
Sbjct: 147 GLTNFTTGKGKVSLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 193

[Close]

BLAST of Spg024280 vs. NCBI nr
Match: XP_042992771.1 (GTP-binding protein SAR1A isoform X1 [Carya illinoinensis] >KAG2693347.1 hypothetical protein I3760_08G091900 [Carya illinoinensis] >KAG6700033.1 hypothetical protein I3842_08G091300 [Carya illinoinensis] >KAG7967211.1 hypothetical protein I3843_08G087700 [Carya illinoinensis])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 80/107 (74.77%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+EALADV FLILGN IDIP       +  HL
Sbjct: 115 KVDAVVYLVDAYDKERFAESKKELDALLSDEALADVPFLILGNKIDIPYAASEDELRYHL 174

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
                 TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKWLSQYIK
Sbjct: 175 GLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 221

[Close]

BLAST of Spg024280 vs. NCBI nr
Match: KJB24406.1 (hypothetical protein B456_004G144100 [Gossypium raimondii])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 47  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVH 106
           F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  H
Sbjct: 40  FQVDAVVYLVDAYDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEDELRYH 99

Query: 107 LRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
           L      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 100 LGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 147

[Close]

BLAST of Spg024280 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36
Identity = 75/107 (70.09%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
             +   TGKGKV+L + NVRPLEVFMCSIVRKMGYG+GFKW+SQYIK
Sbjct: 147 GLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193

[Close]

BLAST of Spg024280 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.9e-36
Identity = 76/107 (71.03%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
             +   TGKGKV L   NVRPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 147 GLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193

[Close]

BLAST of Spg024280 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-35
Identity = 74/106 (69.81%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESK++LDALLS+EALA V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 154
                 TGKGKV+L +  VRPLEVFMCSIVRKMGYG+GFKWLSQYI
Sbjct: 147 GLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192

[Close]

BLAST of Spg024280 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32
Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD  D+ERF E+KK+LD LLS+E+L +V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
               + TGKG ++LA  NVRP+EVFMCSIVRKMGYG+GFKW+SQYIK
Sbjct: 147 GLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193

[Close]

BLAST of Spg024280 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-32
Identity = 72/108 (66.67%), Postives = 81/108 (75.00%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERF+ESKK+LDALLS++ALA V FLILGN ID P       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLA--NLNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 154
                 TGKGKV+ A  +  VRPLEVFMCSIVRKMGYG+GFKWLSQYI
Sbjct: 147 GLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194

[Close]

BLAST of Spg024280 vs. ExPASy TrEMBL
Match: A0A7J8P3W6 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=Gorai_014776 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.8e-36
Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 47  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVH 106
           F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  H
Sbjct: 5   FQVDAVVYLVDAYDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEDELRYH 64

Query: 107 LRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
           L      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 65  LGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 112

[Close]

BLAST of Spg024280 vs. ExPASy TrEMBL
Match: A0A0D2R4Q5 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G144100 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.8e-36
Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 47  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVH 106
           F+VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  H
Sbjct: 40  FQVDAVVYLVDAYDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEDELRYH 99

Query: 107 LRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
           L      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 100 LGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 147

[Close]

BLAST of Spg024280 vs. ExPASy TrEMBL
Match: A0A6A2XSJ5 (GTP-binding protein SAR1B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111398pilonHSYRG00177 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.2e-35
Identity = 78/110 (70.91%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 45  SAFEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVT 104
           S F+VD  VYLVD YDKERFAESKK++DALLS+E+LA+V FLILGN IDIP       + 
Sbjct: 6   SGFQVDAVVYLVDAYDKERFAESKKEVDALLSDESLANVPFLILGNKIDIPYAASEDELR 65

Query: 105 VHLRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
            HL      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 66  YHLGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 115

[Close]

BLAST of Spg024280 vs. ExPASy TrEMBL
Match: A0A061DRC2 (Secretion-associated RAS super family 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_004790 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.2e-35
Identity = 79/108 (73.15%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 47  FEVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVH 106
           F VD  VYLVD YDKERFAESKK+LDALLS+EALA+V FLILGN IDIP       +  H
Sbjct: 158 FHVDAVVYLVDAYDKERFAESKKELDALLSDEALANVPFLILGNKIDIPYAASEDELRYH 217

Query: 107 LRSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
           L      TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 218 LGLTNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWMSQYIK 265

[Close]

BLAST of Spg024280 vs. ExPASy TrEMBL
Match: A0A2P6R7I2 (Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0456901 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.2e-35
Identity = 79/107 (73.83%), Postives = 86/107 (80.37%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+EALA V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDSYDKERFAESKKELDALLSDEALATVPFLILGNKIDIPYAASEEELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
             N   TGKGKV+LA+ NVRPLEVFMCSIVRKMGYGDGFKW+SQYIK
Sbjct: 147 GLNNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWVSQYIK 193

[Close]

BLAST of Spg024280 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 )

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 75/107 (70.09%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
             +   TGKGKV+L + NVRPLEVFMCSIVRKMGYG+GFKW+SQYIK
Sbjct: 147 GLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWVSQYIK 193

[Close]

BLAST of Spg024280 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-37
Identity = 75/106 (70.75%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESKK+LDALLS+E+LA+V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKKELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 154
                 TGKGKV+LA  NVRPLEVFMCSIVRKMGYG+GFKW+SQYI
Sbjct: 147 GLTSFTTGKGKVNLAGTNVRPLEVFMCSIVRKMGYGEGFKWVSQYI 192

[Close]

BLAST of Spg024280 vs. TAIR 10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 75/107 (70.09%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YD+ERFAESKK+LDALLS+E+LA V FLILGN IDIP       +  HL
Sbjct: 16  QVDALVYLVDAYDQERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRFHL 75

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
             +   TGKGKV+L + NVRPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 76  GLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 122

[Close]

BLAST of Spg024280 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B )

HSP 1 Score: 149.1 bits (375), Expect = 3.0e-36
Identity = 74/106 (69.81%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YDKERFAESK++LDALLS+EALA V FLILGN IDIP       +  HL
Sbjct: 87  KVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 154
                 TGKGKV+L +  VRPLEVFMCSIVRKMGYG+GFKWLSQYI
Sbjct: 147 GLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 192

[Close]

BLAST of Spg024280 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 )

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-33
Identity = 69/107 (64.49%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 48  EVDVAVYLVDPYDKERFAESKKQLDALLSNEALADVSFLILGNMIDIPICCIRRRVTVHL 107
           +VD  VYLVD YD++RF ESK++LDALLS+EALA+V  LILGN IDIP       +  +L
Sbjct: 87  KVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYL 146

Query: 108 RSNKLHTGKGKVSLANLNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 155
                 TGKG V+L +  VRPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 147 GLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 193

The following BLAST results are available for this feature:

BLAST of Spg024280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_042992772.1	1.4e-35	74.77	GTP-binding protein SAR1A isoform X2 [Carya illinoinensis] >KAG2693346.1 hypothe...	[more]
MBA0583939.1	1.4e-35	73.15	hypothetical protein [Gossypium raimondii]	[more]
XP_042988256.1	1.4e-35	74.77	GTP-binding protein SAR1B [Carya illinoinensis] >KAG2695757.1 hypothetical prote...	[more]
XP_042992771.1	1.4e-35	74.77	GTP-binding protein SAR1A isoform X1 [Carya illinoinensis] >KAG2693347.1 hypothe...	[more]
KJB24406.1	1.4e-35	73.15	hypothetical protein B456_004G144100 [Gossypium raimondii]	[more]

BLAST of Spg024280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04834	2.9e-36	70.09	GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1	[more]
O04266	2.9e-36	71.03	GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1	[more]
Q01474	4.2e-35	69.81	GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1	[more]
P52884	1.5e-32	62.62	GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1	[more]
O04267	2.6e-32	66.67	GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1	[more]

BLAST of Spg024280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J8P3W6	6.8e-36	73.15	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=Gorai_014776 PE=3 SV=...	[more]
A0A0D2R4Q5	6.8e-36	73.15	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G144100 PE=3 ...	[more]
A0A6A2XSJ5	1.2e-35	70.91	GTP-binding protein SAR1B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111398pil...	[more]
A0A061DRC2	1.2e-35	73.15	Secretion-associated RAS super family 2 isoform 1 OS=Theobroma cacao OX=3641 GN=...	[more]
A0A2P6R7I2	1.2e-35	73.83	Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr...	[more]

BLAST of Spg024280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02080.1	2.1e-37	70.09	secretion-associated RAS super family 2	[more]
AT3G62560.1	2.7e-37	70.75	Ras-related small GTP-binding family protein	[more]
AT1G02620.1	3.5e-37	70.09	Ras-related small GTP-binding family protein	[more]
AT1G56330.1	3.0e-36	69.81	secretion-associated RAS 1B	[more]
AT1G09180.1	4.1e-33	64.49	secretion-associated RAS super family 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 38..63 score: 39.59 coord: 127..151 score: 81.88 coord: 83..104 score: 46.52
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 3..153 e-value: 3.4E-19 score: 79.8
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 48..153 e-value: 4.2E-20 score: 71.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 23..154 e-value: 1.1E-27 score: 98.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 47..153
IPR006687	Small GTPase superfamily, SAR1-type	PANTHER	PTHR45684	RE74312P	coord: 47..154
None	No IPR available	PANTHER	PTHR45684:SF12	GTP-BINDING PROTEIN SAR1A-LIKE	coord: 47..154
None	No IPR available	PROSITE	PS51422	SAR1	coord: 1..153 score: 12.885017

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024280.1	Spg024280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum
biological_process	GO:0003400	regulation of COPII vesicle coating
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0070971	endoplasmic reticulum exit site
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding