Spg024275 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024275
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 22153742 .. 22156188 (-)
RNA-Seq ExpressionSpg024275
SyntenySpg024275
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCGAAGGTCACGAGTAGGTTGCCCAAATCCACCGAAGCTCGTCGTTGCTCGCCAGATCTGTCGAAGCTCGTCGTTGTTTACCAGACCGTCGAAGCTCTTCGTCGCCCAAATCCACCGCTCGAGAATGTCCAGATCTTGCCGTCGCCCAGATCCACAGCTCACGAGTAGGTCGTCGCTCGCCCAGATTCGCCAAAGCTCGCCCAGATCTACTGTCGCTCGCGACCGTGAGGGAGGAGAAGCTTGGAAGCCAGTAGATCTCTCTCGCTCATCTGTTCTTTTTCTTTTTTTTTTTTTTAAAAAGAAAACTTGGAGAAGGGAAGAGAAGGAAGGAAGGAAGGAAAAAACAAATAAAAAGTTAGGCGGCGGCCGCCGGTGAGCGGTGGTCACCGGCCGCCGTGGGTGCTCTCCGGCTGTCGTGGATGTGATAATGAAGAAGAAGAAGAGGGAGAAGAAGATAAAGGGGAATAGAAATATTAAAAATATTATAAAATAATAATATTTTCTATTATTTTAATATATTTATATTTTTAAAAAATCAAAAATAATTTTTTAATAAAAAAAATTAGTGCCACGTCAGCATCCCATTAACTATTAACGGAAAATTTGATGGAGGGACCAAAATGAAACTAAAATCAAACCTCAGGGACTAAATTGTTGAGTTTGAAAACTCAGGGACCAAAATGAAACCTAACCCAAACCTCAGGGACTAAAAGTGTATTTTTCCCTTTATTTTTTAGGTGCAACTAGATAAATGACTATTTTTAATTGGACATTTTGAAAAATGGTCATATGATTTTTCCATTTGAAAAATGGTCAATTGCTATTTTTAGTAGGTTTTTCTTTCAAACGAGTCAGACGAAAATTTCCCTATACGAAATCTAAATCCAATGAACCGATAAATTAAAATACAGCGTAAATGCAGTGAACTAAAAATACAAATACAGCTACAACGTGAATTTAGGAGAGAATCTAGGGTTTACCCTTAATTTAACGACCCATTGAAAATCAATCAAATTCAAATTTAACAAACATAACAAATAAGATAACAAACATCAACCAATTAGCACGAATCAAGGGAGAGAGTTGTAGAATTAAAAATATATATATATGTTAACTCTTACCTTACAAATAGGGAGCGCACGGAAATGATTGAATCGATTAACTTGTGTGTATTTAAATTACTAAATTCATTTACAGACAAAACTCTATTTTTTTTTCCAAACCCTTACCAGATATTGTCTCGTTGGGTATTCAATAACCTAACTTCAAAGTGTATTCAGTAAACTTGCAAATAATTCCAATCTTGAAAAACGGGAAGAAATCATTACTCACTGTTGGTCGCTACCGCAAGCGCACGGTATCGCAAGTAATATAAAACGGAAAGTATTCCGAGTATCGAATCCTCAGGGAATTTGAATTATATCCATTAAGTACCAAAAACCATCATGTTCAATTTTATTTAGAAGTCCAATCTCGAATGATAGAGCGAAAATTAAAGAAACTAATAAAAAGAAACATGCAAGTAAAAGGGAATTTTCCTATGAAAGGGGGCTTGACCTAGGGTGTTAACTAGCTTTCTTGGATTTGTAGCTCAATTACATGGATATATGTAATTAATAATCTTCAATTTCATAAATCTAGAAGTGATTATAAGCGGATTTCTCTTTCAAGTTCCTCCACATCTCATACTAACACAACTAATTTATGTGTCCATCTCCTTAGTTAATCCTAGTATGGCATTAAGCAACTTCATTAACAATTTCTAACAATTCTTTTTCACTCTCGTGTTCCAAGCAATTATTAGCCATGCAATTTGGATCTAATCTAAATTCTCTCTGTCGAGCATCAATTCAGACCAATAAATCAATTAATCCGTGATCAAGAGATTAAAGGCATTAAGCAAAAATTGCATAGATGAAATATGAAGAATTTCATTACATAATCCAATTAATTGCGCTACAATATCCAATTAACTAGAATAACGACCCTAGGTCTCAAGATCTACTCACAACTGGAAATAATTTTGCCAAAATGATCTTGATCCATAGGCCTAACTCAAATTAAAATAAGAAATTACAAAGAAGTAAGGAAGAAATAACCGATAAGTTGATCCCAAGCTTCCGCTACGATCATCTCGAATCCGAGCCTTGGAATCTCGCTCAATTCCTCATTTTCCCTCACAATTCTTCTTTCTTTTTCTCTCTATTGAGCTAGGGGAGAGATCCCCAAAAATGGGATGATTTGAACCAAAGGGAAGGGGCCTTTTTATAGTGCAGAATCCAGACCTTTCTTGCTGCCCAAGACGCACAGCGTCGAGACGCTACGTCACAGCGTCGAGACGCTGTGACGTCAGGTTTTCTTGGAGCAGAAGTTGTCGCAGCGTCGCGACGCTACGCGGATAGCGACGCGACTCTACCGCGATTCTGGAGCTTTCTTCACTGA

mRNA sequence

ATGCATCGAAGGTCACGAGTAGGTTGCCCAAATCCACCGAAGCTCGTCGTTGCTCGCCAGATCTGTCGAAGCTCGTCGTTGTTTACCAGACCGTCGAAGCTCTTCGTCGCCCAAATCCACCGCTCGAGAATGTCCAGATCTTGCCGTCGCCCAGATCCACAGCTCACGAGTAGGTCGTCGCTCGCCCAGATTCGCCAAAGCTCGCCCAGATCTACTTGCAGAATCCAGACCTTTCTTGCTGCCCAAGACGCACAGCGTCGAGACGCTACGTCACAGCGTCGAGACGCTGTGACGTCAGGTTTTCTTGGAGCAGAAGTTGTCGCAGCGTCGCGACGCTACGCGGATAGCGACGCGACTCTACCGCGATTCTGGAGCTTTCTTCACTGA

Coding sequence (CDS)

ATGCATCGAAGGTCACGAGTAGGTTGCCCAAATCCACCGAAGCTCGTCGTTGCTCGCCAGATCTGTCGAAGCTCGTCGTTGTTTACCAGACCGTCGAAGCTCTTCGTCGCCCAAATCCACCGCTCGAGAATGTCCAGATCTTGCCGTCGCCCAGATCCACAGCTCACGAGTAGGTCGTCGCTCGCCCAGATTCGCCAAAGCTCGCCCAGATCTACTTGCAGAATCCAGACCTTTCTTGCTGCCCAAGACGCACAGCGTCGAGACGCTACGTCACAGCGTCGAGACGCTGTGACGTCAGGTTTTCTTGGAGCAGAAGTTGTCGCAGCGTCGCGACGCTACGCGGATAGCGACGCGACTCTACCGCGATTCTGGAGCTTTCTTCACTGA

Protein sequence

MHRRSRVGCPNPPKLVVARQICRSSSLFTRPSKLFVAQIHRSRMSRSCRRPDPQLTSRSSLAQIRQSSPRSTCRIQTFLAAQDAQRRDATSQRRDAVTSGFLGAEVVAASRRYADSDATLPRFWSFLH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024275.1Spg024275.1mRNA