Spg024250 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024250
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PMD domain-containing protein
Location	scaffold4: 16598714 .. 16603636 (+)
RNA-Seq Expression	Spg024250
Synteny	Spg024250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAAATGCTTGGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGCGTTATTCTTCTTGTAGGAAAGGCAATATGTGGTAATTTTAGGAGATCACTGCAGGGATTAAAGCCCTTGCGCATCGGAAACGTTCAGACCATTAACTCAGTTTTTAATCGGGATTAAAATACCGTACGTTGGCAAAACATTTTACAGCAGAAAATAACAATTTAATCTACTGAAAAACAGGATAGAAAGCATGCAAAAACAGATCAATAGGACCTAAATCTAATCTATAGAAAGATCCTAATGATCTAAGGATTTAAGAGGACTTACTTACGTAGTCGTTCTTGATCGATTCGCCAAAATCCCTTAAATTTTCACCAAAAACCAGCAGCAAAATCTCTCCTTTTCATGTTGGAAAAATACCACGAACACCACCAAATAGATTGCACTGGTATCCTCTTGAAGGATATTGCGTTGGTAGCTTGTGGGAGCAAGATTTCTAAGGGTTGTGGAAGAGATCGTTTTTCCTCTGTGTTGCTAGAGAGAAAACGCAAAAGGGACTAGAATCCATAGAGAGGGAGTTGCATGAATGAGGCCTTAGGGTTCTCAGTGAGGAGGTTATTCAACCGATGAATTAAACTTCCCACTCCTAAAAAGCCTCCTATTCACGCATAACTATAGGTAAGTGGGAAGACTGGTTTTTTTAATCAGTTGAAAAACTGATAAAAAACAAATTAGTAATCAAAATTATTAATTAATTAATTTATTAAATTAACAATTAATTTAATATAATTATTTATATAAAACACTTTTATATAAATTTCCCACATAACCTATAGTTTTAATAAAATTCAATTAAATCAAATTTAATTAAATTAAATTTAATTAAATTAAATTAAAACAATAGTTAATTAATTATCCAATTAATTAATATTATAATTAAATATCACATATTTAATTATATTTCTCTCAAATAAACTATAGTATTAATGTACATCATATGTGCATTAATTATAACCTATAGTTTTTAACATGAATCAAATCCATATTTTAACTTAATATTCGAACCCTTTCGAATATTTAATTCTCCCTTAGAAATTTACCTCAATGCCCTAAATGAGCTACCGGTGGGACCTAATGGACCTACAAATCAGAAGCTCCAACGATATGAGATTAATTGGCTAAACTCATTAACCAAGTTAATCAATGTTCGTTAACTGTGGTTCACTCCACTATAAAACCACAGCTGCACTCTTCTCACTGCAGACATATTTCTGTGTCCACGGATATTGACCATTAACAGCAAGTCAGCCCTTCACGTGTGTCCGTACCCCATCTAGGTCAAATTACCGTTTTACCCCTAGGCTACCTCTTTATCCTTCAGTACCAGTGCTCCTCTAATGAACAGCCCGTTTGAGGTCCAACCAGCAAACAGAAGTTCCTCTCGTGCCATAGAGAGGGCAGGGCCCATTGTTCAAGACCCGGAGACACCACTTAAGGGAACACACCTCTACTTACCCTAGAGTCGGGAAGGAGTGAATTCCATCTTGTGACATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGGCATGCAGGCCACTCTCACCCGTACAAATCAAAGGACAATCCCTCATGGACAGGAGTCCATAATCCACTCAGGATTGAGACTAAGTTGCCTAGGTCATCCTAGTGAAATAGAAACCAAGCTAACTTACGGTGTTACAGTTAGTGGTTAACTATTTCGCAGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCTCACTTGCATGTCAACTACATGAACATGTTGGATCATTGCGTTTGTATCATAATACAAAGCGGGTCGTATCCATAGTGTCACCAGGATAAGGTACCCAGCCGCATCCCTATACTATAGACCCTTTAGGCTAAATCTTGAACATTGATCCCCGTATGTCCTTGCATACTAGTTCAAGCCTCATTCTATTAGCCTAGGATGTTTAGTTTATTGGATTAGGGTTAATAAGACAAGATTGCACAATACAAACATAGATAAATGAATAATACATCATTTTATTAATGTTCGGTCAAAAGTACATTTACTATCTACGAGTTTTAGGACATAAAACCCAACAATCACAACCTTGTCTAGATAATTCTACCTTTTTGTCTAGATGGTCGGAAGAAAGACTTTTGAGTCACGACTCTTCATTGAAGGCGTGGTTTTTAGAGTTTCCAGTGCATAACAAGGTGCTGGGTGAAAATCCAGAATCAACTTTATGTCGTCGAATTATTGGAGATGAACAGGTTCGCTAGGGTAGTTCATTAAAAATTCATGGAGAATTCTTTTATATCCCTGATTATTGGGAATGGTTAGAGGTCGTAATTTCTCTAAATACACCGATACTGAAGAAAGCTCGTTTGTTTGATGCTGTAATGGCTTCCCTGTACACTTATGATTGCAATTATGATATAATTCGAGGTTTTTGTGAAGCATGGTGCCCTTCCACAAATACACTTCATACATCATCAGGAGAGTTGTCTATCTCTCTATGGGACATGTGGAGATTAGGAGGTCTTTCCATCAAAGGTAGGTTTTATGATGAAGTTGTTCCTTGCTGTAAGGAATTATTAGGTTCGCCTGATCAAGAGGATGAAGACTGTCCAAAAAGTTGTGAGTATCTTTTTGCTGCATACTATCACATTGCATCTCAACAACGTGATTGACTTCAAATTCCTATCAAATCGTGGATTTCTTTTTGGTTTAAAGGGGATTCAAAATATGAAAAACCTCCTCCCCGAAAGTCGAAGAAGGCTTCTCGTCCACGTCAGAACTATAATCCAGATGGAGCTCCTATCAAGCGTCACGACTGGTCTGAAAAAGAAATGGATATATTTTGGATGTTGGGCGTAGAAGATGAATTGAAACATAAAACATACCTGGTCGTCTTTCTTTCTTGTTGGCTGTGCGTATTTGTATTTCTTCCCTTTGTCCAGGAGTTTTTAAAGTCGCCAGTCTTATGGCTGAAGGTTACATTTTTAGTCTTGATGTTCCTGTTTTGGCCAATATCTATCATGGACTAGGCCAGATTCACAATGCATCTCCCTCGGCTGGATTTTCAAAGGCTTGTTTCCCTCTGCATTATGTCCATGCTTGGTTGGCTTATTACTTTAACACGCATTATAAAGTTTCAGCACCTTTCACTGGCCCGGTGATGGTTGAATTTTCTGGCGAGGGTGGGGCTAAGTACTTTGACGATTTTGAAGCCCGTTTACATATTCACAAAGGTAAATATGTGTCATGGTATGCAAGTCTTCAAGCTAGAAATATAGGTGAGCTTTTGAAGGATGACGGGAAATTGTCGTTTTGGCTTTCTTCATTCTTCATAAGCATTCGATCGTGTTTCTTATCTTCACGCTGTGGATCGTTGATGGTTATCGGAGCTTATAGTCCTTGTTGATTTAGTCGACAATTTGGATTCTATCAAGACATACTGAATGACTTGGGTAAAGAAATTCCTGAGGCAAATTTAGCCAATGTGTTACGTCTTTGGAGGATATGCACTCAAAGAGAAACATTATCCCAAGTTTACCTTCCTGCTTGTGCAACGAAATCACACACTCAAGTTACTCAACGCTACAGAAGTTGATGGTTAGCCAAGCATGAGAATTATCTTGAAGAAGACATACAAAAGTTGGTGGGTACTGCTTCTGCTCTTCCCTCTAAGCCCAAGTTACCTAAAAAGGTTGGTAGTAATAATGGAGGTAAAAGGATTCGCCTGTTTGAACCTGGTGAATTTCTTTCTATTGATAATGATGGTAGTCGAGCAGTGGCGGCGATCATCATTAGAAAATGCCTAAAAAGTCCAATCAACCATCAGTATGTGAAGATGAATTTTTTTATGGAGTTCCCAGCGCATCACAATTTCCTGAACTCCCTGCACCACTGGTAAGTGTTTTCATTCCTTCTTCATTATAATATTTTACTATTATTATTATTATCATTATTACTTACTTTTTTTTTACAGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCATAGTCCTTCTTTTGTGAGTCCATACGTTTTTGATTCTGTAGCTGCACGTGTGGGCAATTTCAAAGCATCGCTGGATAGAGTTGTGACTCAATCTTGTCATCTTGTAACTAATGAGATTCCTAAACAAATGAAGACAACAACACATGCAGCTGCGTCTGAGGTCTCTAATTATGGTGCTGACAATGTGATTTCCAACTATAGGGAACATGCTGCCCTTGCCATGTGGGAGAGCATACAATAGAAGATCGTGCGCACTTCCGTCGACAGGATACCTCGTCTTGAACAAGAGACGTCCAAAATATTTCATGCGATTTCTGAGACCTGTGCATCCAGCTTGGGCCCTCTTAAAGAAATTGTAAGTGCATATTTCAAGAAAGTAGAGAAGTATAACCAACTGCAGTCGTCGTTTGCTTCTCAATTAACTTCGGAGAGTAAGAATCGCCAATTGAAAGAGACTAAGTTTAGCTTGGAGAAGATACTATGTAGTGAAAGTGAACTACTCACAGCGAAGAGTATACTTCAGCAACAACATTTGCAAGCACTGTGAGAAGAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGATGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACGATACTTCATGGAAAGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGACGTCGTTATCAGATTTCATTTTTTTTATATCATTGTAG

mRNA sequence

ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAAATGCTTGGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGCGTTATTCTTCTTGTAGGAAAGGCAATATGTGGAGTTTTTAAAGTCGCCAGTCTTATGGCTGAAGGTTACATTTTTAGTCTTGATGTTCCTGTTTTGGCCAATATCTATCATGGACTAGGCCAGATTCACAATGCATCTCCCTCGGCTGGATTTTCAAAGGCTTGTTTCCCTCTGCATTATGTCCATGCTTGGTTGGCTTATTACTTTAACACGCATTATAAAGTTTCAGCACCTTTCACTGGCCCGGTGATGGTTGAATTTTCTGGCGAGGGTGGGGCTAAGTACTTTGACGATTTTGAAGCCCGTTTACATATTCACAAAGGTAAATATGTGTCATGGTATGCAAGTCTTCAAGCTAGAAATATAGGTGAGCTTTTGAAGGATGACGGGAAATTGTCCGCATCACAATTTCCTGAACTCCCTGCACCACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCATAGTCCTTCTTTTGTGAGTCCATACGTTTTTGATTCTGTAGCTGCACGTGTGGGCAATTTCAAAGCATCGCTGGATAGAGTTGTGACTCAATCTTGTCATCTTGTAACTAATGAGATTCCTAAACAAATGAAGACAACAACACATGCAGCTGCGTCTGAGGTCTCTAATTATGGTGCTGACAATGTGATTTCCAACTATAGGGAACATGCTGCCCTTGCCATCTTGGGCCCTCTTAAAGAAATTGTAAGTGCATATTTCAAGAAAGTAGAGAAGTATAACCAACTGCAGTCGTCGTTTGCTTCTCAATTAACTTCGGAGAAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGATGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACGATACTTCATGGAAAGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGACGTCGTTATCAGATTTCATTTTTTTTATATCATTGTAG

Coding sequence (CDS)

ATGGTGTATTTTACCGAGCATCCTGATCCTGAGAAAAAATGCTTGGTTATCTTGAAGGATAGAGATCAACCTGTTGAAAATGGCGTTATTCTTCTTGTAGGAAAGGCAATATGTGGAGTTTTTAAAGTCGCCAGTCTTATGGCTGAAGGTTACATTTTTAGTCTTGATGTTCCTGTTTTGGCCAATATCTATCATGGACTAGGCCAGATTCACAATGCATCTCCCTCGGCTGGATTTTCAAAGGCTTGTTTCCCTCTGCATTATGTCCATGCTTGGTTGGCTTATTACTTTAACACGCATTATAAAGTTTCAGCACCTTTCACTGGCCCGGTGATGGTTGAATTTTCTGGCGAGGGTGGGGCTAAGTACTTTGACGATTTTGAAGCCCGTTTACATATTCACAAAGGTAAATATGTGTCATGGTATGCAAGTCTTCAAGCTAGAAATATAGGTGAGCTTTTGAAGGATGACGGGAAATTGTCCGCATCACAATTTCCTGAACTCCCTGCACCACTGTCACCTTTAAATGATCCCCTTATAGAAGCCGAGGGGCATCATAGTCCTTCTTTTGTGAGTCCATACGTTTTTGATTCTGTAGCTGCACGTGTGGGCAATTTCAAAGCATCGCTGGATAGAGTTGTGACTCAATCTTGTCATCTTGTAACTAATGAGATTCCTAAACAAATGAAGACAACAACACATGCAGCTGCGTCTGAGGTCTCTAATTATGGTGCTGACAATGTGATTTCCAACTATAGGGAACATGCTGCCCTTGCCATCTTGGGCCCTCTTAAAGAAATTGTAAGTGCATATTTCAAGAAAGTAGAGAAGTATAACCAACTGCAGTCGTCGTTTGCTTCTCAATTAACTTCGGAGAAAGAAGAATTGGAAGCTAGGCTTGAAGCTGTGAAAGCTAAGCGATGTGAGATTTCTAAATTGATTGTCGAGAAGGAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATTGAAGATGCCCCTGTTCTTACTGATGCTGATGCTAAAACTCTGACGATACTTCATGGAAAGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGACGTCGTTATCAGATTTCATTTTTTTTATATCATTGTAG

Protein sequence

MVYFTEHPDPEKKCLVILKDRDQPVENGVILLVGKAICGVFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGKLSASQFPELPAPLSPLNDPLIEAEGHHSPSFVSPYVFDSVAARVGNFKASLDRVVTQSCHLVTNEIPKQMKTTTHAAASEVSNYGADNVISNYREHAALAILGPLKEIVSAYFKKVEKYNQLQSSFASQLTSEKEELEARLEAVKAKRCEISKLIVEKEDLLKQHQLEASKLRGTISSIEDAPVLTDADAKTLTILHGKLEDAQEELKNYKWTSLSDFIFFISL

Homology

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BLAST of Spg024250 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 5.0e-42
Identity = 86/121 (71.07%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 40  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNT 99
           VFKVASLMAEGY FSL VPVLANIY GL Q+H+++ S G+S ACFPLHYVH WLA YFNT
Sbjct: 333 VFKVASLMAEGYTFSLAVPVLANIYSGLRQVHDSTSSLGYSNACFPLHYVHGWLALYFNT 392

Query: 100 HYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGK 159
           HYK      GP MVEFSGEGGAKY+ + EAR HIHKGKYVSW+A L  +N  ELL DDG+
Sbjct: 393 HYKAPRSLRGPRMVEFSGEGGAKYYTNLEARTHIHKGKYVSWHACLPTKNKDELLTDDGE 452

Query: 160 L 161
           L
Sbjct: 453 L 453

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BLAST of Spg024250 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-11
Identity = 67/243 (27.57%), Postives = 107/243 (44.03%), Query Frame = 0


Query: 204 GNFKASLDRVVTQSCHLVTNEIPKQMKTTTHAAASEVSNYGADNVISNYREHAALAI--- 263
           GN K  +   +  +C  V    P++++ T     SE+S++ AD++IS+ R  AA+ +   
Sbjct: 757 GNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWEN 816

Query: 264 ----------------------------------LGPLKEIVSAYFKKVEKYNQLQSSFA 323
                                             L  L+E+V+ YF+ VE +NQ+ SSF 
Sbjct: 817 LRQKIIRTPFERLSSLEPEMHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFL 876

Query: 324 SQ-------------------------------------LTSEKEELEARLEAVKAKRCE 373
            Q                                     L++++ +LEA+L+ V+A+  +
Sbjct: 877 LQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSAKEAKLEAKLKMVRAESAK 936

HSP 2 Score: 172.2 bits (435), Expect = 8.8e-39
Identity = 138/472 (29.24%), Postives = 205/472 (43.43%), Query Frame = 0


Query: 40  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNT 99
           VF+VASLMA G I+SL VPVLANIYHGLG I  AS   G     FP+HYVH WLA+YF T
Sbjct: 195 VFRVASLMATGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGT 254

Query: 100 HYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGE------- 159
           HY +     GP M  FSGEGG+ YF ++EAR  IH G  + W+A+LQ RN  E       
Sbjct: 255 HYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMHGTYF 314

Query: 160 -------------------LLKDDGK---------------------------------- 219
                              LLK+ G                                   
Sbjct: 315 EDNRHHLVSSAIPPPSQPRLLKNRGSNLGGKEIRLVEAMAPNLEEEVKEHESDSSKSDRH 374

Query: 220 -------------------LSASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFD 279
                              LSA + P++P PLSPLND    LIE E     S   P+  D
Sbjct: 375 WKRPLKKAKVSGDHPDGRGLSALEVPDVP-PLSPLNDHLEGLIEPES--DESLTGPHAVD 434

Query: 280 SVAARVGNFKASLDRVVTQSCH--LVTNEIPK----------QMKTTTHAAASEVS--NY 339
           S    VG  K  +++   QS     +  EI +          ++ ++   A  + S   +
Sbjct: 435 SAFEEVGTSKTPVNKPTEQSLRPSALLEEIRRGKMTVGGKDLEIPSSKEGACPKASLQKW 494

Query: 340 GADNVISNYREHAALAI-------------------------------------LGPLKE 372
             + V+SN+ +  AL +                                     L  L+E
Sbjct: 495 VGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGIEKIHTDGLTSLEE 554

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BLAST of Spg024250 vs. NCBI nr
Match: KAA0060136.1 (uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-38
Identity = 82/121 (67.77%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 40  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNT 99
           VFKVASLMAEG  FSL +P+LANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT
Sbjct: 81  VFKVASLMAEGDTFSLAIPILANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNT 140

Query: 100 HYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGK 159
           +YK      GP MVEFSGEGGAKY+ + EAR HIH  KYVSW+A LQA+N  ELL DDG 
Sbjct: 141 YYKAPTSLRGPRMVEFSGEGGAKYYTNLEARTHIHMEKYVSWHACLQAKNKDELLTDDGT 200

Query: 160 L 161
           L
Sbjct: 201 L 201

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BLAST of Spg024250 vs. NCBI nr
Match: TYK08451.1 (uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 2.0e-38
Identity = 82/119 (68.91%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 42  KVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHY 101
           KVASLMAEG  FSL +PVLANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT+Y
Sbjct: 166 KVASLMAEGDTFSLAIPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYY 225

Query: 102 KVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGKL 161
           K      GP MVEFSGEGGAKY+ + EAR HIHK KYVSW+A LQA+N  ELL DDG L
Sbjct: 226 KAPTSLRGPRMVEFSGEGGAKYYTNLEARTHIHKEKYVSWHACLQAKNKDELLTDDGTL 284

[Close]

BLAST of Spg024250 vs. NCBI nr
Match: KAA0059654.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 5.4e-36
Identity = 144/528 (27.27%), Postives = 211/528 (39.96%), Query Frame = 0


Query: 39  GVFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFN 98
           GVF+VASLMA G I+SL VPVL NIYHGLG I  AS   G     FP+HYVH WLA+YF 
Sbjct: 230 GVFRVASLMAAGTIYSLAVPVLTNIYHGLGLITKASNLIGRMDFHFPMHYVHGWLAHYFG 289

Query: 99  THYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKD-- 158
           THY +     GP +  FSG+G + +F ++EAR  IH G  + W+A+LQ RN  E + D  
Sbjct: 290 THYPLPTEVRGPKITNFSGKGWSIHFGEYEARELIHNGARIQWHANLQNRNKHERMVDTH 349

Query: 159 ------------------------------------------------------------ 218
                                                                       
Sbjct: 350 DSSFLQTSYFTTQEPREQPGGKEIRLVEAMAPNLEEEVKVHKNESDSSKSDRHWKRPLKK 409

Query: 219 --------DGK-LSASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFDSVAARVG 278
                   DG+ LSA   P++P PLSPLND    LIE +     S   P+  DS    VG
Sbjct: 410 AKVSGDNPDGRGLSALGVPDVP-PLSPLNDHLEGLIELDS--DESLTGPHAVDSAFEEVG 469

Query: 279 NFKASLDRVVTQSCHLVTN------------------------EIPK---QMKTTTHAAA 338
             K  +++ V QS  L  +                          PK   Q  ++THA  
Sbjct: 470 TSKTPVNKSVEQSLRLSAHLEEIRQGKMIVGAKDLESPSFKEGACPKASLQKVSSTHAPL 529

Query: 339 S-----------------EVSNYGADNVISNYREHAALAI-------------------- 372
                             E S +  + V++N+ +  AL +                    
Sbjct: 530 KFSELPLGASNKQTRRNPEPSRWVGEKVVTNFFQKTALCMWEDIQDKIMRTPFEYIPRFR 589

[Close]

BLAST of Spg024250 vs. ExPASy TrEMBL
Match: A0A5A7U349 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00590 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.3e-39
Identity = 138/472 (29.24%), Postives = 205/472 (43.43%), Query Frame = 0


Query: 40  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNT 99
           VF+VASLMA G I+SL VPVLANIYHGLG I  AS   G     FP+HYVH WLA+YF T
Sbjct: 195 VFRVASLMATGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHGWLAHYFGT 254

Query: 100 HYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGE------- 159
           HY +     GP M  FSGEGG+ YF ++EAR  IH G  + W+A+LQ RN  E       
Sbjct: 255 HYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRNKHERMHGTYF 314

Query: 160 -------------------LLKDDGK---------------------------------- 219
                              LLK+ G                                   
Sbjct: 315 EDNRHHLVSSAIPPPSQPRLLKNRGSNLGGKEIRLVEAMAPNLEEEVKEHESDSSKSDRH 374

Query: 220 -------------------LSASQFPELPAPLSPLND---PLIEAEGHHSPSFVSPYVFD 279
                              LSA + P++P PLSPLND    LIE E     S   P+  D
Sbjct: 375 WKRPLKKAKVSGDHPDGRGLSALEVPDVP-PLSPLNDHLEGLIEPES--DESLTGPHAVD 434

Query: 280 SVAARVGNFKASLDRVVTQSCH--LVTNEIPK----------QMKTTTHAAASEVS--NY 339
           S    VG  K  +++   QS     +  EI +          ++ ++   A  + S   +
Sbjct: 435 SAFEEVGTSKTPVNKPTEQSLRPSALLEEIRRGKMTVGGKDLEIPSSKEGACPKASLQKW 494

Query: 340 GADNVISNYREHAALAI-------------------------------------LGPLKE 372
             + V+SN+ +  AL +                                     L  L+E
Sbjct: 495 VGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGIEKIHTDGLTSLEE 554

[Close]

BLAST of Spg024250 vs. ExPASy TrEMBL
Match: A0A5A7V0Y4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00570 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.6e-39
Identity = 82/121 (67.77%), Postives = 92/121 (76.03%), Query Frame = 0


Query: 40  VFKVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNT 99
           VFKVASLMAEG  FSL +P+LANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT
Sbjct: 81  VFKVASLMAEGDTFSLAIPILANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNT 140

Query: 100 HYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGK 159
           +YK      GP MVEFSGEGGAKY+ + EAR HIH  KYVSW+A LQA+N  ELL DDG 
Sbjct: 141 YYKAPTSLRGPRMVEFSGEGGAKYYTNLEARTHIHMEKYVSWHACLQAKNKDELLTDDGT 200

Query: 160 L 161
           L
Sbjct: 201 L 201

[Close]

BLAST of Spg024250 vs. ExPASy TrEMBL
Match: A0A5D3C9B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00670 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.5e-39
Identity = 82/119 (68.91%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 42  KVASLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVHAWLAYYFNTHY 101
           KVASLMAEG  FSL +PVLANIY GL QIH+ + S G S ACFP+HYVH WLA YFNT+Y
Sbjct: 166 KVASLMAEGDTFSLAIPVLANIYSGLRQIHDCTSSLGHSNACFPIHYVHGWLALYFNTYY 225

Query: 102 KVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNIGELLKDDGKL 161
           K      GP MVEFSGEGGAKY+ + EAR HIHK KYVSW+A LQA+N  ELL DDG L
Sbjct: 226 KAPTSLRGPRMVEFSGEGGAKYYTNLEARTHIHKEKYVSWHACLQAKNKDELLTDDGTL 284

[Close]

BLAST of Spg024250 vs. ExPASy TrEMBL
Match: A0A5D3D3U4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003480 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.4e-35
Identity = 79/130 (60.77%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 40  VFKVA---------SLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVH 99
           VFKVA         SLMAEGY FSL VP+LANIY GL QIH+++ S G S ACFPLHYVH
Sbjct: 110 VFKVASLKAEGYTFSLMAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHYVH 169

Query: 100 AWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNI 159
            WL  YFNTHYK      G  M+EF GEGGA Y+ +  A  HI+KGKYVSW+  LQ +N 
Sbjct: 170 GWLTLYFNTHYKAPTSLRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTKNK 229

Query: 160 GELLKDDGKL 161
            ELLKDDG L
Sbjct: 230 DELLKDDGNL 239

[Close]

BLAST of Spg024250 vs. ExPASy TrEMBL
Match: A0A5A7TJC9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G005550 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.4e-35
Identity = 79/130 (60.77%), Postives = 89/130 (68.46%), Query Frame = 0


Query: 40  VFKVA---------SLMAEGYIFSLDVPVLANIYHGLGQIHNASPSAGFSKACFPLHYVH 99
           VFKVA         SLMAEGY FSL VP+LANIY GL QIH+++ S G S ACFPLHYVH
Sbjct: 110 VFKVASLKAEGYTFSLMAEGYTFSLVVPILANIYSGLRQIHDSTSSLGHSNACFPLHYVH 169

Query: 100 AWLAYYFNTHYKVSAPFTGPVMVEFSGEGGAKYFDDFEARLHIHKGKYVSWYASLQARNI 159
            WL  YFNTHYK      G  M+EF GEGGA Y+ +  A  HI+KGKYVSW+  LQ +N 
Sbjct: 170 GWLTLYFNTHYKAPTSLRGSRMIEFFGEGGANYYTNLVACPHIYKGKYVSWHVCLQTKNK 229

Query: 160 GELLKDDGKL 161
            ELLKDDG L
Sbjct: 230 DELLKDDGNL 239

The following BLAST results are available for this feature:

BLAST of Spg024250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745312.1	5.0e-42	71.07	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
XP_031745312.1	1.6e-11	27.57	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
KAA0060136.1	1.2e-38	67.77	uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]	[more]
TYK08451.1	2.0e-38	68.91	uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]	[more]
KAA0059654.1	5.4e-36	27.27	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg024250 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U349	4.3e-39	29.24	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7V0Y4	5.6e-39	67.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C9B7	9.5e-39	68.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D3U4	6.4e-35	60.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7TJC9	6.4e-35	60.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]

BLAST of Spg024250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 286..306
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 39..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024250.1	Spg024250.1	mRNA