Spg024217 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAAAAGCGAGCGCGAGCTGGATTTGTTCCTCTTGGTGTAAATGTGGATGCTGTGGAAAAAGCTCAAAAGCGGAAGGATGGGCCGTTGTTGTTCTCTCCGAGGAATATTGAGCGCCCCAAAGTTGACGATGGTGGACAGGCGGGGCTGCTCATTATGAAAACTTTATGTTGGAATGTGCGTGGATTGGGGAGTCCATGGGCATTCCGAAATGTGTGTAACGAGTTGTCTTGCTTAAATCCTCATTTATGTCTTCTATCTGAGACAAAATCTTCGTCGTTCACTTTGAATAAATTAACAGCTCGTTTAAATTTTTTCTGGGTGTTTTGTAGTTAATCGTGTTGGTCTGAGCGGGGGTTTGTGTTTACTTTGGAAAAAGGATGTGGACGTTAGCATTCGCAGTTATTCTATCCACCATATAGTTGCTAATATAGTATGGAATGATAAATGCTGGAGGTTTACTGGTGTATATGGGAATCCTGACTCCTCTCTTCGCCATCAGACATGGAACTTAATACGGCGATTGTATTATTTTAACGATAATGCTTGGGTGATCGGGGGAGATCTGAACGAAATTCTCTAGCAAAATGAAAAGATGGGTGGTCCTGATAGGGATAGCCAACAAATTGAAGCTTTTAGATAACTCTTGGATGATTGTAAGCTCAGGGACTTGGGCTTTTCTAGGGGAGTTTTTACCTGGTGCAATCGAAGAAGCTTGGGTAATCAAGTAACTCTAAGGCTTGACCGTTTTGTTGCTAATCAAAATTTTTGTTCACTTTTCGAGCAACTCCAAGTTTTTAATAAGGATTGGGCGAAATCAGATCACAAACCCATAAAGCTTAATTTGGGGGGGAGAGGTATGGACGCAAATAGGAGCAGGAAAAATTGGAAGTTCAAATTTGAGGAGTGGTGGACCAGACATGATGAATGTCGTAATATTATAAGTCGGAATGGAAATTGGAGAAATGGATGGAATGGAAGTCCTTTGTTACATCAGAGATTGGAACAATGTGCAATTCCCTAAAAGGATGGGGTGGTAGCCAGAATAGGAGACTAAAAAATGAGATTAAGGAGATCAAGAGCAAAATTAAAGACTCTTATGATTGCCGAGGACCTATTGATTTTGATGCAATTCATCGGTTGGGGCGGCGACTTGATAATTTGTTATTGGAGGAGGAGATGTACTGGAAACAACGATCGATGGAGAGTTGGCTTAAATGGGGAGACCGAAATACGAGATGGTTCCATCAAAAGGCGTTTGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTTCTTGGCCAAATGTTGTATGTTGTGATCAATTTACTGTTCCCGAGCTCAAAATATGCTTACTTTGATAAGTTAGGGTGTTAAGAATCACTTTTGTCAAATTATACTCATTTGTGCTTAAAAAGACTTGATTTTAAGAGAATTTGACTTAGTTTGTTGCTGTGCAGAAAAACAGAGGAAAAGTTGGAATTCCCCAGAAATGCGAAAGGCAAAAATGAAATGCGACCGCATTTGTGGAAAAATCTGAAGCCGTTCCGAATCGTCCGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAGCTCCTCAACCATTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCAAGCAGAACTCACTGGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG ATGTGGAAAAAGCGAGCGCGAGCTGGATTTGTTCCTCTTGGTGTAAATGTGGATGCTGTGGAAAAAGCTCAAAAGCGGAAGGATGGGCCGTTGTTGTTCTCTCCGAGGAATATTGAGCGCCCCAAAGTTGACGATGGTGGACAGGCGGGGCTGCTCATTATGAAAACTTTATGTTGGAATGTGCGTGGATTGGGGAGTCCATGGGCATTCCGAAATGTGTGTAACGAGTTGTCTTGCTTAAATCCTCATTTATGTCTTCTATCTGAGACAAAATCTTCGTCGTTCACTTTGAATAAATTAACAGCTCGTTTAAATTTTTTCTGGGTGTTTTGGACTTGGGCTTTTCTAGGGGAGTTTTTACCTGGTGCAATCGAAGAAGCTTGGTCGGAATGGAAATTGGAGAAATGGATGGAATGGAAGTCCTTTGTTACATCAGAGATTGGAACAATGTGCAATTCCCTAAAAGGATGGGGTGGTAGCCAGAATAGGAGACTAAAAAATGAGATTAAGGAGATCAAGAGCAAAATTAAAGACTCTTATGATTGCCGAGGACCTATTGATTTTGATGCAATTCATCGGTTGGGGCGGCGACTTGATAATTTGTTATTGGAGGAGGAGATGTACTGGAAACAACGATCGATGGAGAGTTGGCTTAAATGGGGAGACCGAAATACGAGATGGTTCCATCAAAAGGCGTTTGATAAGGAAAAACAGAGGAAAAGTTGGAATTCCCCAGAAATGCGAAAGGCAAAAATGAAATGCGACCGCATTTCTCCTCAACCATTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCAAGCAGAACTCACTGGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG ATGTGGAAAAAGCGAGCGCGAGCTGGATTTGTTCCTCTTGGTGTAAATGTGGATGCTGTGGAAAAAGCTCAAAAGCGGAAGGATGGGCCGTTGTTGTTCTCTCCGAGGAATATTGAGCGCCCCAAAGTTGACGATGGTGGACAGGCGGGGCTGCTCATTATGAAAACTTTATGTTGGAATGTGCGTGGATTGGGGAGTCCATGGGCATTCCGAAATGTGTGTAACGAGTTGTCTTGCTTAAATCCTCATTTATGTCTTCTATCTGAGACAAAATCTTCGTCGTTCACTTTGAATAAATTAACAGCTCGTTTAAATTTTTTCTGGGTGTTTTGGACTTGGGCTTTTCTAGGGGAGTTTTTACCTGGTGCAATCGAAGAAGCTTGGTCGGAATGGAAATTGGAGAAATGGATGGAATGGAAGTCCTTTGTTACATCAGAGATTGGAACAATGTGCAATTCCCTAAAAGGATGGGGTGGTAGCCAGAATAGGAGACTAAAAAATGAGATTAAGGAGATCAAGAGCAAAATTAAAGACTCTTATGATTGCCGAGGACCTATTGATTTTGATGCAATTCATCGGTTGGGGCGGCGACTTGATAATTTGTTATTGGAGGAGGAGATGTACTGGAAACAACGATCGATGGAGAGTTGGCTTAAATGGGGAGACCGAAATACGAGATGGTTCCATCAAAAGGCGTTTGATAAGGAAAAACAGAGGAAAAGTTGGAATTCCCCAGAAATGCGAAAGGCAAAAATGAAATGCGACCGCATTTCTCCTCAACCATTTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCAAGCAGAACTCACTGGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG MWKKRARAGFVPLGVNVDAVEKAQKRKDGPLLFSPRNIERPKVDDGGQAGLLIMKTLCWNVRGLGSPWAFRNVCNELSCLNPHLCLLSETKSSSFTLNKLTARLNFFWVFWTWAFLGEFLPGAIEEAWSEWKLEKWMEWKSFVTSEIGTMCNSLKGWGGSQNRRLKNEIKEIKSKIKDSYDCRGPIDFDAIHRLGRRLDNLLLEEEMYWKQRSMESWLKWGDRNTRWFHQKAFDKEKQRKSWNSPEMRKAKMKCDRISPQPFSTLYKLEIRSQIQAELTGKKRVVTEPWLDANE Homology
BLAST of Spg024217 vs. NCBI nr
Match: EEC70889.1 (hypothetical protein OsI_02427 [Oryza sativa Indica Group]) HSP 1 Score: 86.3 bits (212), Expect = 4.9e-13 Identity = 64/188 (34.04%), Postives = 87/188 (46.28%), Query Frame = 0
BLAST of Spg024217 vs. NCBI nr
Match: MCH87735.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 73.2 bits (178), Expect = 4.3e-09 Identity = 52/189 (27.51%), Postives = 94/189 (49.74%), Query Frame = 0
BLAST of Spg024217 vs. NCBI nr
Match: XP_015384098.1 (uncharacterized protein LOC107176315 [Citrus sinensis]) HSP 1 Score: 72.0 bits (175), Expect = 9.6e-09 Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 0
BLAST of Spg024217 vs. NCBI nr
Match: KAF5441799.1 (hypothetical protein F2P56_036996, partial [Juglans regia]) HSP 1 Score: 71.2 bits (173), Expect = 1.6e-08 Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Spg024217 vs. NCBI nr
Match: XP_019177860.1 (PREDICTED: uncharacterized protein LOC109173056 [Ipomoea nil]) HSP 1 Score: 71.2 bits (173), Expect = 1.6e-08 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of Spg024217 vs. ExPASy TrEMBL
Match: B8AA89 (CCHC-type domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_02427 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-13 Identity = 64/188 (34.04%), Postives = 87/188 (46.28%), Query Frame = 0
BLAST of Spg024217 vs. ExPASy TrEMBL
Match: A0A392MKX6 (Endo/exonuclease/phosphatase domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0008613 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09 Identity = 52/189 (27.51%), Postives = 94/189 (49.74%), Query Frame = 0
BLAST of Spg024217 vs. ExPASy TrEMBL
Match: B8APD4 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_11496 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 7.9e-09 Identity = 52/154 (33.77%), Postives = 82/154 (53.25%), Query Frame = 0
BLAST of Spg024217 vs. ExPASy TrEMBL
Match: A0A2I4F3E3 (uncharacterized protein LOC108995126 OS=Juglans regia OX=51240 GN=LOC108995126 PE=4 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 7.9e-09 Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Spg024217 vs. ExPASy TrEMBL
Match: A0A803PI64 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-08 Identity = 39/125 (31.20%), Postives = 69/125 (55.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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