Spg024131 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTAATTAGCCCTCTAATTTAAACACCACCTTCCATTTTCTCTCCTTCGTCTTCCGATCATGGGCGTTCTAGGTTTTCCCACTAAATTCATCTCCATCATTCCCCCAGCCAAGGCTTTCAAGGCCCTCGTCCTCGACTTCAACCACATCGTTCCCCAGGCCGCTCAAGAAGTCATTCGGAGCATCGACCTCCTTGAAGGCGACGGTGGCCCTGGCTCAGTCAAGCAAATCAACTTCGCCGACGGTAAAAAATAGCAATTCTTTTATTCTAACACTCCACTCTACCACAGGCTCAACCAAGTAATAATTATTATTGGTTATACAAGAAATGATACTACATGTGTTTGAATTCGTTTGCTCAGATATATAATACATTTTTGCATCAAAAGACGATCTACAAGGGACAATTATATAATTGCAAATGGGTGCAGGCAGGAAGTATACGTTCTTAAAGCAAAGAGTGGAGGTAGTGGACTACGAGAAGTTCATATACAAGTTCACCATAATCGATGGCGATATGATCGGGGAAGAGATTGAGAAGATTGAGACAGAGATCAATATTGAAGGGTCGCCGGTGGGAGGGTCCATCTTGCAGGGCTTCAGCAAATATTACACCAAAGACCATGCCAAGTTGAACCATGATGAGATCAAGGAGGGGAAACAGAACTCTGCAGGGCTTTTTAAGTACATTGAGTCCTATCTCGTGGCCAACCCTCAAGCCTAAACTTATTGCTTCCTTCTACGGTTCCCTATGGCCTTCAAATGCTGTAAAAGCTTTGGCGTTTCCTAAACAAATAAAATGGCTCAATATATCTATATATGTACTTTTTTGGTAACTAATATTTGTTTTTTTTTTCTTTTTCTTTTTCCATTTGGTTTGATATTAGTGTTTTCTTTTTCTTTTTAATAAACAAACGTGGGAGTGGGACATCAAAGTTTTGACTTTAAGAAGGTAATGAATGTCGTATCTACTTTAAAAATTAGCACTGAAAAATGATAATATAATGTCACAGTATAGTAGAATATATTTTTAAATTGAGTCAAAA ATGGGCGTTCTAGGTTTTCCCACTAAATTCATCTCCATCATTCCCCCAGCCAAGGCTTTCAAGGCCCTCGTCCTCGACTTCAACCACATCGTTCCCCAGGCCGCTCAAGAAGTCATTCGGAGCATCGACCTCCTTGAAGGCGACGGTGGCCCTGGCTCAGTCAAGCAAATCAACTTCGCCGACGGCAGGAAGTATACGTTCTTAAAGCAAAGAGTGGAGGTAGTGGACTACGAGAAGTTCATATACAAGTTCACCATAATCGATGGCGATATGATCGGGGAAGAGATTGAGAAGATTGAGACAGAGATCAATATTGAAGGGTCGCCGGTGGGAGGGTCCATCTTGCAGGGCTTCAGCAAATATTACACCAAAGACCATGCCAAGTTGAACCATGATGAGATCAAGGAGGGGAAACAGAACTCTGCAGGGCTTTTTAAGTACATTGAGTCCTATCTCGTGGCCAACCCTCAAGCCTAA ATGGGCGTTCTAGGTTTTCCCACTAAATTCATCTCCATCATTCCCCCAGCCAAGGCTTTCAAGGCCCTCGTCCTCGACTTCAACCACATCGTTCCCCAGGCCGCTCAAGAAGTCATTCGGAGCATCGACCTCCTTGAAGGCGACGGTGGCCCTGGCTCAGTCAAGCAAATCAACTTCGCCGACGGCAGGAAGTATACGTTCTTAAAGCAAAGAGTGGAGGTAGTGGACTACGAGAAGTTCATATACAAGTTCACCATAATCGATGGCGATATGATCGGGGAAGAGATTGAGAAGATTGAGACAGAGATCAATATTGAAGGGTCGCCGGTGGGAGGGTCCATCTTGCAGGGCTTCAGCAAATATTACACCAAAGACCATGCCAAGTTGAACCATGATGAGATCAAGGAGGGGAAACAGAACTCTGCAGGGCTTTTTAAGTACATTGAGTCCTATCTCGTGGCCAACCCTCAAGCCTAA MGVLGFPTKFISIIPPAKAFKALVLDFNHIVPQAAQEVIRSIDLLEGDGGPGSVKQINFADGRKYTFLKQRVEVVDYEKFIYKFTIIDGDMIGEEIEKIETEINIEGSPVGGSILQGFSKYYTKDHAKLNHDEIKEGKQNSAGLFKYIESYLVANPQA Homology
BLAST of Spg024131 vs. NCBI nr
Match: CAD33532.1 (pathogenesis-related protein PR10A [Datisca glomerata]) HSP 1 Score: 188.0 bits (476), Expect = 6.4e-44 Identity = 86/158 (54.43%), Postives = 116/158 (73.42%), Query Frame = 0
BLAST of Spg024131 vs. NCBI nr
Match: XP_034925739.1 (major allergen Pru ar 1-like [Populus alba] >KAG6758743.1 hypothetical protein POTOM_035200 [Populus tomentosa] >TKS06533.1 major pollen allergen Bet v 1k family protein [Populus alba]) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-40 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg024131 vs. NCBI nr
Match: XP_002315459.1 (major allergen Pru ar 1 [Populus trichocarpa] >KAG6756878.1 hypothetical protein POTOM_037174 [Populus tomentosa] >PNT13911.1 hypothetical protein POPTR_010G000600 [Populus trichocarpa]) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-39 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg024131 vs. NCBI nr
Match: KAF9842040.1 (hypothetical protein H0E87_011124 [Populus deltoides]) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-39 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg024131 vs. NCBI nr
Match: XP_011014083.1 (PREDICTED: major allergen Pru ar 1-like [Populus euphratica]) HSP 1 Score: 167.5 bits (423), Expect = 9.0e-38 Identity = 80/158 (50.63%), Postives = 110/158 (69.62%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy Swiss-Prot
Match: A0A024B4E4 (Major strawberry allergen Fra a 1.07 OS=Fragaria ananassa OX=3747 GN=Fra a 1.07 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38 Identity = 66/158 (41.77%), Postives = 115/158 (72.78%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy Swiss-Prot
Match: A0A024B2V6 (Major strawberry allergen Fra a 1.08 OS=Fragaria ananassa OX=3747 GN=Fra a 1.08 PE=1 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 5.5e-38 Identity = 65/158 (41.14%), Postives = 117/158 (74.05%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy Swiss-Prot
Match: O50001 (Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.6e-37 Identity = 66/158 (41.77%), Postives = 110/158 (69.62%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy Swiss-Prot
Match: D0E0C7 (Major strawberry allergen Fra a 1-3 OS=Fragaria ananassa OX=3747 GN=FRAA3 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36 Identity = 66/157 (42.04%), Postives = 116/157 (73.89%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy Swiss-Prot
Match: O24248 (Major allergen Pru av 1 OS=Prunus avium OX=42229 GN=PRUA1 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.3e-36 Identity = 66/158 (41.77%), Postives = 110/158 (69.62%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy TrEMBL
Match: Q7Y083 (Pathogenesis-related protein PR10A OS=Datisca glomerata OX=34297 GN=pr10a PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 3.1e-44 Identity = 86/158 (54.43%), Postives = 116/158 (73.42%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy TrEMBL
Match: A0A4U5Q8N3 (Major pollen allergen Bet v 1k family protein OS=Populus alba OX=43335 GN=D5086_0000121710 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 3.6e-40 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy TrEMBL
Match: A0A6M2EDW8 (Bet_v_1 domain-containing protein OS=Populus davidiana OX=266767 PE=3 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 4.6e-40 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy TrEMBL
Match: B9HX02 (Bet_v_1 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G000600 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 6.1e-40 Identity = 82/158 (51.90%), Postives = 111/158 (70.25%), Query Frame = 0
BLAST of Spg024131 vs. ExPASy TrEMBL
Match: A0A6A1VLW3 (Major allergen Pru ar 1 OS=Morella rubra OX=262757 GN=CJ030_MR4G028686 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.7e-37 Identity = 71/158 (44.94%), Postives = 117/158 (74.05%), Query Frame = 0
BLAST of Spg024131 vs. TAIR 10
Match: AT5G45860.1 (PYR1-like 11 ) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-05 Identity = 20/59 (33.90%), Postives = 36/59 (61.02%), Query Frame = 0
BLAST of Spg024131 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 ) HSP 1 Score: 46.6 bits (109), Expect = 2.2e-05 Identity = 40/145 (27.59%), Postives = 68/145 (46.90%), Query Frame = 0
BLAST of Spg024131 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 ) HSP 1 Score: 46.6 bits (109), Expect = 2.2e-05 Identity = 40/145 (27.59%), Postives = 68/145 (46.90%), Query Frame = 0
BLAST of Spg024131 vs. TAIR 10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05 Identity = 27/85 (31.76%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of Spg024131 vs. TAIR 10
Match: AT5G28000.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 3.7e-05 Identity = 26/83 (31.33%), Postives = 46/83 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|