Spg024097 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATATCCACCCGATCTTATGAACTTCCTCTGATATTATTTGAAGCTCGAGTATCTACAGGTTTCATTGCAAGTAATGTGGCTGTTATGACAGAAAATGTAAATAACGTAACAATCAAAGGGCGAAGAAAAAGAACACAGATTTTATTATGAGTATGCAGATAACAGAGATTAGGGCAAAACAGGTTAAGAGGGACCCAAAATAAAAGCCCAAAATGGAAAATTATATCTAATCCCTATACATAATTTAGCTTAGAGGGCGTTGTCTCCGAACTTCCGTACTTGGTCATTCGGAGTGCTTCATATCAGATTCAAGACATATCAACAATGGCAATAGTTGAAACAAAATATGATTGAAAGGGTGGACGAACAGGAAAAAGGCAAATCAACTAAGCGTCAAATTACAGAGATCGGTTTTAAGTGTATATAGCAAGAAACAAATTATCTTGCTGTGCCACTTTTTTCAAGACCCTAGCGAAAATGAAAAAGAAATTCATCGAATTACTCAAGTGATTAAGTATATAAAGTTTGCAGGTTTGTTCTTACTCGAGAGAGATGGAAATTATGTAGCTCACAGGTTCACTCAACATCTACAAAGCACAGACACTTTAGCACTATGGATGGGTTAGACACTAGTTGTACAAATTCGGTACAACTTTAATATTTGTTAGACGCGTACCAATCACTTATCAAGTATACTATGTAAACACATGATATTAAAATTTGAAAGTGAAATACATCAAACTCATTTTTAAACATACAAATCCATAAACTTAATGATTTTGAATTTTTTGCCTGGTATGAAAATGATAGATTTTCAAAATTGTATATTTTCAAAACCGTGTCCTTGTCACATCCATGTTCTGGATTTTAAAAAATGATGTGTCACAGTGCGTATCTGTATCTGTATCCATACTTCTTAGCTCAACATATAAAAAGAGAAGGATGTTATTTTATATATGCCGTGAAGACTGCCCCTCACAGTTTGATGTCTTTTTAAAAAGAGTATTTCACCTTTTTCTTAAAAAAAAAAAAGTCCTTGAACTTTTATCATAAAATTTTTGAGTTTTGATCTTTCTTGCATTTCAAACATATGACAATTATGTTTGGTCTAGAGTCTAGACATAGTAAAACACACATGGTTCCACAAGGCACAGTTCAGTTTATTCAAATTCTTTATTCATGAGAACCTTAATCCATGGAGTTGGCAACCCACAAGCACAGTTCAATTCTTATGCACTCATCATATTCTCTCCATCATCCACATCTATTGAAAACATGCATGTGAAGAAAGCAAAACCAAAACATCACAAGAACAAAAAAGAAGAAACAAAGCCCATCTTGCTAGTTGAGAAGAACAGGAAAAATCAATTACTTTACATCACCAAAAGAAAGAGAGGACCATTTCTCTTGATTTCAGCCTTTCACCACACCAATAATAATGAGTGCTTCTCTAAAGCAACTTGTAGTGGAGGCAAAGCTCATGATTGTGCTTCCCTCCTCTGTCAAAAGAAGCCCAAAAAATCCTTTCAGACTTTCCCCACTCTGTTTTAAGTGCACAGCAAACTGCAATCATCATGACAAAACTTCCCATTACTTTTTGTGGCAAATCCCCAAATCTTCTGCCTGCCATCTGTTTGATCAAATGCTTAACGACTCTGTTCTTCTTCTCTCACAGGCCTCCAAGTTTGGTCATGGTTTCAACCGATCCAACCGGTGAAGACAGGCGTTTCCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAAGCTTTGGCAGCAAAGGAGAAGGAAGCAAGACGAGCACCGTTTTCAGATCACGTTCTGTTGAAGAAAAGAGAGATGGGGTCAAGCAAAAATGGCAGAATCATCAACTACAAGATGGAAATGGAAAAGGGTCTAATGGGATTCATTTAGAATTCCCAAATCTTAAGAGCAATTTAAAGAAGAAGACAAAGGAGAATTGTTCTACAGAAACAAGGAAAGTGAACTGGCCTGATGCTCATGGCAAAGATATTGCTCACATCCAAGAGTTTGAACCAAGGTATGGTTTAGTTTACAATCATTACCAAGGATTTTTATGATTAAGCTCAATTATCCCAAGGATTAAAGCAACATAATGTGTGTTTGAAAACCATAATTCATGATCAAAACCTGTTTCTGGTTGTGTTGAACAGTGTTTCAGGAGATGGGGAGCTTGAGGGAGTGAGGAACTCTTGTGTCTGCACAATTCAGTAAAACAAGAAAAGGAAAAGGTATGTTTTCATTTACCTTCCATGTATCAGCATTGTTCAAATATGTCAAACCTTGACACAAAGGGTTTAGTTTAGTCCTGAGATTGGATAGCTGATGAAAAGATAAATTTGTATTAGATTTTCTTGTTCTTGCCATCTCTAAAGCCTCAGGGTTTGCTTCAAAGAATAATATGGCTACCATATTAACCATAGAAGTACCATATTTTGCTTGTTTTTCTTTTATCCATTTAGTGAAGTCCCCTTTCAGAATAATGCGTGTGTTAGCAGCTTCATCTTGTAGAGATACTTAGAAATTGATGCTATAAGCTTCATTGAACCCTACTAAACAAGACTACTCAATGTATCGTACTCGAATGATTGGGATAATCTTTAATAGCTTGTAGATTGTTTT ATGATATCCACCCGATCTTATGAACTTCCTCTGATATTATTTGAAGCTCGAGTATCTACAGGTTTCATTGCAAGCCTCCAAGTTTGGTCATGGTTTCAACCGATCCAACCGGTGAAGACAGGCGTTTCCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAAGCTTTGGCAGCAAAGGAGAAGGAAGCAAGACGAGCACCGTTTTCAGATCACGTTCTGTTGAAGAAAAGAGAGATGGGGTCAAGCAAAAATGGCAGAATCATCAACTACAAGATGGAAATGGAAAAGGGTCTAATGGGATTCATTTAGAATTCCCAAATCTTAAGAGCAATTTAAAGAAGAAGACAAAGGAGAATTGTTCTACAGAAACAAGGAAAGTGAACTGGCCTGATGCTCATGGCAAAGATATTGCTCACATCCAAGAGTTTGAACCAAGTGTTTCAGGAGATGGGGAGCTTGAGGGAGTGAGGAACTCTTGTGTCTGCACAATTCAGTAA ATGATATCCACCCGATCTTATGAACTTCCTCTGATATTATTTGAAGCTCGAGTATCTACAGGTTTCATTGCAAGCCTCCAAGTTTGGTCATGGTTTCAACCGATCCAACCGGTGAAGACAGGCGTTTCCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAAGCTTTGGCAGCAAAGGAGAAGGAAGCAAGACGAGCACCGTTTTCAGATCACGTTCTGTTGAAGAAAAGAGAGATGGGGTCAAGCAAAAATGGCAGAATCATCAACTACAAGATGGAAATGGAAAAGGGTCTAATGGGATTCATTTAGAATTCCCAAATCTTAAGAGCAATTTAAAGAAGAAGACAAAGGAGAATTGTTCTACAGAAACAAGGAAAGTGAACTGGCCTGATGCTCATGGCAAAGATATTGCTCACATCCAAGAGTTTGAACCAAGTGTTTCAGGAGATGGGGAGCTTGAGGGAGTGAGGAACTCTTGTGTCTGCACAATTCAGTAA MISTRSYELPLILFEARVSTGFIASLQVWSWFQPIQPVKTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGEGSKTSTVFRSRSVEEKRDGVKQKWQNHQLQDGNGKGSNGIHLEFPNLKSNLKKKTKENCSTETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ Homology
BLAST of Spg024097 vs. NCBI nr
Match: KAG6593791.1 (hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68 Identity = 140/165 (84.85%), Postives = 147/165 (89.09%), Query Frame = 0
BLAST of Spg024097 vs. NCBI nr
Match: KAG7026120.1 (hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68 Identity = 140/165 (84.85%), Postives = 147/165 (89.09%), Query Frame = 0
BLAST of Spg024097 vs. NCBI nr
Match: XP_021648722.1 (uncharacterized protein LOC110641343 [Hevea brasiliensis]) HSP 1 Score: 141.4 bits (355), Expect = 8.0e-30 Identity = 84/159 (52.83%), Postives = 105/159 (66.04%), Query Frame = 0
BLAST of Spg024097 vs. NCBI nr
Match: XP_024931762.1 (uncharacterized protein LOC112492388 [Ziziphus jujuba]) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29 Identity = 88/185 (47.57%), Postives = 111/185 (60.00%), Query Frame = 0
BLAST of Spg024097 vs. NCBI nr
Match: KAF3972265.1 (hypothetical protein CMV_004221 [Castanea mollissima]) HSP 1 Score: 139.0 bits (349), Expect = 4.0e-29 Identity = 85/152 (55.92%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A6P6GC85 (uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC112492388 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 8.6e-30 Identity = 88/185 (47.57%), Postives = 111/185 (60.00%), Query Frame = 0
BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A061ELW3 (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020382 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28 Identity = 80/148 (54.05%), Postives = 94/148 (63.51%), Query Frame = 0
BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A7J9E5R1 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_017094 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 5.8e-26 Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0
BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A7J8RS91 (Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_016268 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 5.8e-26 Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0
BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A7J8M2J2 (Uncharacterized protein (Fragment) OS=Gossypium lobatum OX=34289 GN=Golob_015857 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 5.8e-26 Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0
BLAST of Spg024097 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 5.6e-05 Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0
BLAST of Spg024097 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05 Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0
BLAST of Spg024097 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 3.6e-04 Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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