Spg024097 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg024097
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhosphoribosylformylglycinamidine synthase 2
Locationscaffold13: 5308216 .. 5310913 (-)
RNA-Seq ExpressionSpg024097
SyntenySpg024097
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATCCACCCGATCTTATGAACTTCCTCTGATATTATTTGAAGCTCGAGTATCTACAGGTTTCATTGCAAGTAATGTGGCTGTTATGACAGAAAATGTAAATAACGTAACAATCAAAGGGCGAAGAAAAAGAACACAGATTTTATTATGAGTATGCAGATAACAGAGATTAGGGCAAAACAGGTTAAGAGGGACCCAAAATAAAAGCCCAAAATGGAAAATTATATCTAATCCCTATACATAATTTAGCTTAGAGGGCGTTGTCTCCGAACTTCCGTACTTGGTCATTCGGAGTGCTTCATATCAGATTCAAGACATATCAACAATGGCAATAGTTGAAACAAAATATGATTGAAAGGGTGGACGAACAGGAAAAAGGCAAATCAACTAAGCGTCAAATTACAGAGATCGGTTTTAAGTGTATATAGCAAGAAACAAATTATCTTGCTGTGCCACTTTTTTCAAGACCCTAGCGAAAATGAAAAAGAAATTCATCGAATTACTCAAGTGATTAAGTATATAAAGTTTGCAGGTTTGTTCTTACTCGAGAGAGATGGAAATTATGTAGCTCACAGGTTCACTCAACATCTACAAAGCACAGACACTTTAGCACTATGGATGGGTTAGACACTAGTTGTACAAATTCGGTACAACTTTAATATTTGTTAGACGCGTACCAATCACTTATCAAGTATACTATGTAAACACATGATATTAAAATTTGAAAGTGAAATACATCAAACTCATTTTTAAACATACAAATCCATAAACTTAATGATTTTGAATTTTTTGCCTGGTATGAAAATGATAGATTTTCAAAATTGTATATTTTCAAAACCGTGTCCTTGTCACATCCATGTTCTGGATTTTAAAAAATGATGTGTCACAGTGCGTATCTGTATCTGTATCCATACTTCTTAGCTCAACATATAAAAAGAGAAGGATGTTATTTTATATATGCCGTGAAGACTGCCCCTCACAGTTTGATGTCTTTTTAAAAAGAGTATTTCACCTTTTTCTTAAAAAAAAAAAAGTCCTTGAACTTTTATCATAAAATTTTTGAGTTTTGATCTTTCTTGCATTTCAAACATATGACAATTATGTTTGGTCTAGAGTCTAGACATAGTAAAACACACATGGTTCCACAAGGCACAGTTCAGTTTATTCAAATTCTTTATTCATGAGAACCTTAATCCATGGAGTTGGCAACCCACAAGCACAGTTCAATTCTTATGCACTCATCATATTCTCTCCATCATCCACATCTATTGAAAACATGCATGTGAAGAAAGCAAAACCAAAACATCACAAGAACAAAAAAGAAGAAACAAAGCCCATCTTGCTAGTTGAGAAGAACAGGAAAAATCAATTACTTTACATCACCAAAAGAAAGAGAGGACCATTTCTCTTGATTTCAGCCTTTCACCACACCAATAATAATGAGTGCTTCTCTAAAGCAACTTGTAGTGGAGGCAAAGCTCATGATTGTGCTTCCCTCCTCTGTCAAAAGAAGCCCAAAAAATCCTTTCAGACTTTCCCCACTCTGTTTTAAGTGCACAGCAAACTGCAATCATCATGACAAAACTTCCCATTACTTTTTGTGGCAAATCCCCAAATCTTCTGCCTGCCATCTGTTTGATCAAATGCTTAACGACTCTGTTCTTCTTCTCTCACAGGCCTCCAAGTTTGGTCATGGTTTCAACCGATCCAACCGGTGAAGACAGGCGTTTCCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAAGCTTTGGCAGCAAAGGAGAAGGAAGCAAGACGAGCACCGTTTTCAGATCACGTTCTGTTGAAGAAAAGAGAGATGGGGTCAAGCAAAAATGGCAGAATCATCAACTACAAGATGGAAATGGAAAAGGGTCTAATGGGATTCATTTAGAATTCCCAAATCTTAAGAGCAATTTAAAGAAGAAGACAAAGGAGAATTGTTCTACAGAAACAAGGAAAGTGAACTGGCCTGATGCTCATGGCAAAGATATTGCTCACATCCAAGAGTTTGAACCAAGGTATGGTTTAGTTTACAATCATTACCAAGGATTTTTATGATTAAGCTCAATTATCCCAAGGATTAAAGCAACATAATGTGTGTTTGAAAACCATAATTCATGATCAAAACCTGTTTCTGGTTGTGTTGAACAGTGTTTCAGGAGATGGGGAGCTTGAGGGAGTGAGGAACTCTTGTGTCTGCACAATTCAGTAAAACAAGAAAAGGAAAAGGTATGTTTTCATTTACCTTCCATGTATCAGCATTGTTCAAATATGTCAAACCTTGACACAAAGGGTTTAGTTTAGTCCTGAGATTGGATAGCTGATGAAAAGATAAATTTGTATTAGATTTTCTTGTTCTTGCCATCTCTAAAGCCTCAGGGTTTGCTTCAAAGAATAATATGGCTACCATATTAACCATAGAAGTACCATATTTTGCTTGTTTTTCTTTTATCCATTTAGTGAAGTCCCCTTTCAGAATAATGCGTGTGTTAGCAGCTTCATCTTGTAGAGATACTTAGAAATTGATGCTATAAGCTTCATTGAACCCTACTAAACAAGACTACTCAATGTATCGTACTCGAATGATTGGGATAATCTTTAATAGCTTGTAGATTGTTTT

mRNA sequence

ATGATATCCACCCGATCTTATGAACTTCCTCTGATATTATTTGAAGCTCGAGTATCTACAGGTTTCATTGCAAGCCTCCAAGTTTGGTCATGGTTTCAACCGATCCAACCGGTGAAGACAGGCGTTTCCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAAGCTTTGGCAGCAAAGGAGAAGGAAGCAAGACGAGCACCGTTTTCAGATCACGTTCTGTTGAAGAAAAGAGAGATGGGGTCAAGCAAAAATGGCAGAATCATCAACTACAAGATGGAAATGGAAAAGGGTCTAATGGGATTCATTTAGAATTCCCAAATCTTAAGAGCAATTTAAAGAAGAAGACAAAGGAGAATTGTTCTACAGAAACAAGGAAAGTGAACTGGCCTGATGCTCATGGCAAAGATATTGCTCACATCCAAGAGTTTGAACCAAGTGTTTCAGGAGATGGGGAGCTTGAGGGAGTGAGGAACTCTTGTGTCTGCACAATTCAGTAA

Coding sequence (CDS)

ATGATATCCACCCGATCTTATGAACTTCCTCTGATATTATTTGAAGCTCGAGTATCTACAGGTTTCATTGCAAGCCTCCAAGTTTGGTCATGGTTTCAACCGATCCAACCGGTGAAGACAGGCGTTTCCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCTTCAGGAAGCTTTGGCAGCAAAGGAGAAGGAAGCAAGACGAGCACCGTTTTCAGATCACGTTCTGTTGAAGAAAAGAGAGATGGGGTCAAGCAAAAATGGCAGAATCATCAACTACAAGATGGAAATGGAAAAGGGTCTAATGGGATTCATTTAGAATTCCCAAATCTTAAGAGCAATTTAAAGAAGAAGACAAAGGAGAATTGTTCTACAGAAACAAGGAAAGTGAACTGGCCTGATGCTCATGGCAAAGATATTGCTCACATCCAAGAGTTTGAACCAAGTGTTTCAGGAGATGGGGAGCTTGAGGGAGTGAGGAACTCTTGTGTCTGCACAATTCAGTAA

Protein sequence

MISTRSYELPLILFEARVSTGFIASLQVWSWFQPIQPVKTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGEGSKTSTVFRSRSVEEKRDGVKQKWQNHQLQDGNGKGSNGIHLEFPNLKSNLKKKTKENCSTETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ
Homology
BLAST of Spg024097 vs. NCBI nr
Match: KAG6593791.1 (hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 140/165 (84.85%), Postives = 147/165 (89.09%), Query Frame = 0

Query: 26   LQVWSWFQPIQPVKTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGEGSKTST 85
            LQVWSWFQ I+PVK GVSLLI LL   A+AARSRCTAVVCSCYAPSGSF +KGEGSKTST
Sbjct: 845  LQVWSWFQRIEPVKRGVSLLIVLL---ASAARSRCTAVVCSCYAPSGSFNNKGEGSKTST 904

Query: 86   VFRSRSVEEKRDGVKQKWQ-NHQLQDGNGKGSNGIHLEFPNLKSNLKKKTK------ENC 145
            +FRSRSVEEKRDGVKQKW+ NH+LQDGNG GSNGIHLE PNLKSNLKKKTK      E C
Sbjct: 905  IFRSRSVEEKRDGVKQKWRNNHELQDGNGNGSNGIHLEIPNLKSNLKKKTKEKEEEEETC 964

Query: 146  STETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
             TETRKVNWPDAHGKDIAHIQEF+PSVSGDGELEGVRNSCVCTIQ
Sbjct: 965  PTETRKVNWPDAHGKDIAHIQEFDPSVSGDGELEGVRNSCVCTIQ 1006

BLAST of Spg024097 vs. NCBI nr
Match: KAG7026120.1 (hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 140/165 (84.85%), Postives = 147/165 (89.09%), Query Frame = 0

Query: 26   LQVWSWFQPIQPVKTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGEGSKTST 85
            LQVWSWFQ I+PVK GVSLLI LL   A+AARSRCTAVVCSCYAPSGSF +KGEGSKTST
Sbjct: 859  LQVWSWFQRIEPVKRGVSLLIVLL---ASAARSRCTAVVCSCYAPSGSFNNKGEGSKTST 918

Query: 86   VFRSRSVEEKRDGVKQKWQ-NHQLQDGNGKGSNGIHLEFPNLKSNLKKKTK------ENC 145
            +FRSRSVEEKRDGVKQKW+ NH+LQDGNG GSNGIHLE PNLKSNLKKKTK      E C
Sbjct: 919  IFRSRSVEEKRDGVKQKWRNNHELQDGNGNGSNGIHLEIPNLKSNLKKKTKEKEEEEETC 978

Query: 146  STETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
             TETRKVNWPDAHGKDIAHIQEF+PSVSGDGELEGVRNSCVCTIQ
Sbjct: 979  PTETRKVNWPDAHGKDIAHIQEFDPSVSGDGELEGVRNSCVCTIQ 1020

BLAST of Spg024097 vs. NCBI nr
Match: XP_021648722.1 (uncharacterized protein LOC110641343 [Hevea brasiliensis])

HSP 1 Score: 141.4 bits (355), Expect = 8.0e-30
Identity = 84/159 (52.83%), Postives = 105/159 (66.04%), Query Frame = 0

Query: 39  KTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGEGSKTSTVFRSRSVEEKRDG 98
           K  ++L   LLAAS   A++RCTA+V SCYAPS SF +KGE +  S   +++ +EEK DG
Sbjct: 88  KESLTLFTVLLAAS---AQNRCTALVRSCYAPSRSFSTKGEENNRSNNAKNQILEEKTDG 147

Query: 99  VKQK-WQNHQLQ---------DGNGKGSNGIHLEFPNLKSNLKKKTK----ENCSTETRK 158
           V ++   NH+ Q         +G   GSNG H+E P LKSNLK+ T         T  RK
Sbjct: 148 VMEEVSNNHESQGQEKSNGGSNGRSGGSNGPHIEPPTLKSNLKRTTTVEEINQSRTGKRK 207

Query: 159 VNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
           V+WPDAHG DIAH+ EFEPS+S DGELEGVRNSC+CTIQ
Sbjct: 208 VSWPDAHGNDIAHVHEFEPSLSEDGELEGVRNSCICTIQ 243

BLAST of Spg024097 vs. NCBI nr
Match: XP_024931762.1 (uncharacterized protein LOC112492388 [Ziziphus jujuba])

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29
Identity = 88/185 (47.57%), Postives = 111/185 (60.00%), Query Frame = 0

Query: 26  LQVWSWFQPI--QPVKTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGE---- 85
           LQ+WSW   I     +  ++L   LLAAS   A+++CT +V SCY PS  + +KGE    
Sbjct: 22  LQLWSWCFSIHRNRKERRITLSFVLLAAS---AQNKCTTLVWSCYVPSKGYHNKGEENSK 81

Query: 86  ------GSKTSTVFRSRSVEEKRDGVKQKWQNHQL------------QDGNGKGSNGIHL 145
                  S +    + +SV EK+DGVK++  N++             ++    GSNG H+
Sbjct: 82  NDDNNDNSNSIISDKKQSVAEKKDGVKEEVDNNEARGCDSSSSNNGGRNSRSSGSNGPHI 141

Query: 146 EFPNLKSNLKKKTKE---NCSTETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSC 184
           E  NLKSNLKK   E      TE RKV+WPDAHGKDIAH+QEFEPSVS DGELEGVRNSC
Sbjct: 142 EHSNLKSNLKKAVVEENNQLRTERRKVSWPDAHGKDIAHVQEFEPSVSEDGELEGVRNSC 201

BLAST of Spg024097 vs. NCBI nr
Match: KAF3972265.1 (hypothetical protein CMV_004221 [Castanea mollissima])

HSP 1 Score: 139.0 bits (349), Expect = 4.0e-29
Identity = 85/152 (55.92%), Postives = 101/152 (66.45%), Query Frame = 0

Query: 44  LLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGEGSKTST---VFRSRSVEEKRDGVK 103
           +L  LLAAS   A++RC+A+VCSCY PS S  +K E S  S+     + +S  EKRDGV 
Sbjct: 1   MLSVLLAAS---AQNRCSALVCSCYVPSRSLDNKVEESNRSSNNNNTKKQSRAEKRDGVM 60

Query: 104 QKWQNHQLQDGNG------KGSNGIHLEFPNLKSNLKKKT---KENCSTETRKVNWPDAH 163
           ++  NH+L+  NG       GSNG H+E P LKSNLKK T         E RKV+WPDAH
Sbjct: 61  EELHNHELRLQNGGNYSRSSGSNGPHIEHPTLKSNLKKTTIVDGNQPRLEKRKVSWPDAH 120

Query: 164 GKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
           GKDIAH+ EFEPSVS DGEL GVRNSCVC IQ
Sbjct: 121 GKDIAHVHEFEPSVSEDGELGGVRNSCVCAIQ 149

BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A6P6GC85 (uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC112492388 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 8.6e-30
Identity = 88/185 (47.57%), Postives = 111/185 (60.00%), Query Frame = 0

Query: 26  LQVWSWFQPI--QPVKTGVSLLIALLAASAAAARSRCTAVVCSCYAPSGSFGSKGE---- 85
           LQ+WSW   I     +  ++L   LLAAS   A+++CT +V SCY PS  + +KGE    
Sbjct: 22  LQLWSWCFSIHRNRKERRITLSFVLLAAS---AQNKCTTLVWSCYVPSKGYHNKGEENSK 81

Query: 86  ------GSKTSTVFRSRSVEEKRDGVKQKWQNHQL------------QDGNGKGSNGIHL 145
                  S +    + +SV EK+DGVK++  N++             ++    GSNG H+
Sbjct: 82  NDDNNDNSNSIISDKKQSVAEKKDGVKEEVDNNEARGCDSSSSNNGGRNSRSSGSNGPHI 141

Query: 146 EFPNLKSNLKKKTKE---NCSTETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSC 184
           E  NLKSNLKK   E      TE RKV+WPDAHGKDIAH+QEFEPSVS DGELEGVRNSC
Sbjct: 142 EHSNLKSNLKKAVVEENNQLRTERRKVSWPDAHGKDIAHVQEFEPSVSEDGELEGVRNSC 201

BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A061ELW3 (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020382 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28
Identity = 80/148 (54.05%), Postives = 94/148 (63.51%), Query Frame = 0

Query: 58  SRCTAVVCSCYAPSGSFGSKGE----GSKTSTVFRSRSVEEKRDGVKQKWQNHQLQD--- 117
           +RCTA+VCSCY PS +F SKG+     S  S+  + RS  EK+DGV ++  N + Q    
Sbjct: 2   NRCTALVCSCYVPSRNFDSKGDQENSRSSGSSNIKKRSAVEKKDGVMEEVGNDESQGQDR 61

Query: 118 -GNGKGS---------NGIHLE-FPNLKSNLKKKT----KENCSTETRKVNWPDAHGKDI 177
             NG G          NG H+E  P  KSNLKK T    +    TE RKV+WPDAHGKDI
Sbjct: 62  ISNGSGGSNSGCSGTYNGPHIELIPTRKSNLKKPTTVDQENQLKTERRKVSWPDAHGKDI 121

Query: 178 AHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
           AH+QEFEPSVS DGELEGVRNSCVC IQ
Sbjct: 122 AHVQEFEPSVSDDGELEGVRNSCVCAIQ 149

BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A7J9E5R1 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_017094 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.8e-26
Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0

Query: 49  LAASAAAARSRCTAVVCSCYAPSGSFGSKGE------GSKTSTVFRSRSVEEK-RDGVKQ 108
           LA  AA+A++RCTA+VCSCY PS +  SK E       S +S + +  S+E+  +DGV +
Sbjct: 1   LALLAASAQNRCTALVCSCYVPSRNSSSKEEEIISNRSSSSSNIKKRTSLEKNIKDGVME 60

Query: 109 KW-----QNHQLQ-----DGNGKGSNGIHLE-FPNLKSNLKKKTK----------ENCST 168
           +       N +LQ       NG G+NG H+E  P LKSNLKK T           E   T
Sbjct: 61  EAAGNNNNNDELQLSVDKISNGSGTNGSHIEPNPTLKSNLKKTTTAAADDNDGEGELMKT 120

Query: 169 ETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
           E RKV+WPDAHGKDIAH++EFEPSVS DGELEGVR SCVC IQ
Sbjct: 121 ERRKVSWPDAHGKDIAHVREFEPSVSDDGELEGVRRSCVCVIQ 163

BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A7J8RS91 (Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_016268 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.8e-26
Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0

Query: 49  LAASAAAARSRCTAVVCSCYAPSGSFGSKGE------GSKTSTVFRSRSVEEK-RDGVKQ 108
           LA  AA+A++RCTA+VCSCY PS +  SK E       S +S + +  S+E+  +DGV +
Sbjct: 15  LALLAASAQNRCTALVCSCYVPSRNSSSKEEEIISNRSSSSSNIKKRTSLEKNIKDGVME 74

Query: 109 KW-----QNHQLQ-----DGNGKGSNGIHLE-FPNLKSNLKKKTK----------ENCST 168
           +       N +LQ       NG G+NG H+E  P LKSNLKK T           E   T
Sbjct: 75  EAAGNNNNNDELQLSIDKISNGSGTNGSHIEPNPTLKSNLKKTTTAAADDNDGEGELMKT 134

Query: 169 ETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
           E RKV+WPDAHGKDIAH++EFEPSVS DGELEGVR SCVC IQ
Sbjct: 135 ERRKVSWPDAHGKDIAHVREFEPSVSDDGELEGVRRSCVCVIQ 177

BLAST of Spg024097 vs. ExPASy TrEMBL
Match: A0A7J8M2J2 (Uncharacterized protein (Fragment) OS=Gossypium lobatum OX=34289 GN=Golob_015857 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 5.8e-26
Identity = 83/163 (50.92%), Postives = 102/163 (62.58%), Query Frame = 0

Query: 49  LAASAAAARSRCTAVVCSCYAPSGSFGSKGE------GSKTSTVFRSRSVEEK-RDGVKQ 108
           LA  AA+A++RCTA+VCSCY PS +  SK E       S +S + +  S+E+  +DGV +
Sbjct: 1   LALLAASAQNRCTALVCSCYVPSRNSSSKEEEIISNRSSSSSNIKKRTSLEKNIKDGVME 60

Query: 109 KW-----QNHQLQ-----DGNGKGSNGIHLE-FPNLKSNLKKKTK----------ENCST 168
           +       N +LQ       NG G+NG H+E  P LKSNLKK T           E   T
Sbjct: 61  EAAGNNNNNDELQLSIDKISNGSGTNGSHIEPNPTLKSNLKKTTTAAADDNDGEGELMKT 120

Query: 169 ETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTIQ 184
           E RKV+WPDAHGKDIAH++EFEPSVS DGELEGVR SCVC IQ
Sbjct: 121 ERRKVSWPDAHGKDIAHVREFEPSVSDDGELEGVRRSCVCVIQ 163

BLAST of Spg024097 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 5.6e-05
Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 126 LKSNLKKKTKENCS---TETRKVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTI 183
           LKS+LKK+  ++      E +KV W D  GK++A I+EFE S   D   +G   SCVC I
Sbjct: 113 LKSSLKKEVLDSADGGRKEKKKVQWVDLMGKELAEIREFESSEEEDVRYDG-DQSCVCVI 171

BLAST of Spg024097 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-05
Identity = 28/74 (37.84%), Postives = 38/74 (51.35%), Query Frame = 0

Query: 126 LKSNLKKKTKENC--------------STETRKVNWPDAHGKDIAHIQEFEPSVSGDGEL 183
           LKS+LKK++  +                 + RKV WPD  G +IA ++EFEPS   + E 
Sbjct: 108 LKSSLKKRSFSDVVIGDDDVSRDGVVDHIDRRKVQWPDTCGIEIAEVREFEPSEVDESED 167

BLAST of Spg024097 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.6e-04
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 126 LKSNLKKKTKENCSTETR---KVNWPDAHGKDIAHIQEFEPSVSGDGELEGVRNSCVCTI 183
           LKS+L+K    +   E R   KV W D  GK++A I+EFEPS   D + +  + +CVC I
Sbjct: 61  LKSSLRKVDSNSTEAEKREKKKVQWVDVIGKELAEIREFEPSDEDDIDSDRGK-TCVCII 119

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6593791.11.1e-6884.85hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7026120.11.1e-6884.85hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_021648722.18.0e-3052.83uncharacterized protein LOC110641343 [Hevea brasiliensis][more]
XP_024931762.11.8e-2947.57uncharacterized protein LOC112492388 [Ziziphus jujuba][more]
KAF3972265.14.0e-2955.92hypothetical protein CMV_004221 [Castanea mollissima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P6GC858.6e-3047.57uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC11249238... [more]
A0A061ELW38.1e-2854.05Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_020382 PE=4 ... [more]
A0A7J9E5R15.8e-2650.92Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_01709... [more]
A0A7J8RS915.8e-2650.92Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_016... [more]
A0A7J8M2J25.8e-2650.92Uncharacterized protein (Fragment) OS=Gossypium lobatum OX=34289 GN=Golob_015857... [more]
Match NameE-valueIdentityDescription
AT3G13480.15.6e-0543.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G34010.19.5e-0537.84unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G55475.13.6e-0441.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33401:SF21SUBFAMILY NOT NAMEDcoord: 81..183
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 81..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg024097.1Spg024097.1mRNA