Spg024090 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024090
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase V subunit 5C-like
Location	scaffold13: 10992937 .. 10996483 (-)
RNA-Seq Expression	Spg024090
Synteny	Spg024090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGCCAAAGAAGAAGACGTCGTGAGACCTACAAAATTGATGGCCAATTTTGGAAGGGTGTTCGACATAATTTGGCCGAGATACGTGAAGCCATGAATGATTATATTCAAATATGCAAAGAGATGGATTTACGAGACGAAGCCAAGAAGGCTCGAGCTGCACAATCCAATCAAATTAATGGAGATTGTTTAGCACCTCTGGATGATGACGACCAACACATTCAAAATGGGGGTGATCATCAAAATCAAGAAGAAGAAGAGACAAACGGCGAGGTTAGTATAAAAGACAATGATGTGGTTGATATATGTGTTGAGAATGAGCTTGAGGTAGGTAAAATCTCAAGAGAAAAGTGAGGTGAGTCAAGAGAGTGAGCAAATCGAAAAAAGTGTGAAAAGTAAGAAAATAGAGTGTGTTAAAAGTGAGATGTTGGAGAAAAAGGAGAAACTTGAAAAAGAAAAGAGTGGATATGAAAAAAAGTTTTTAAGTGAAAAAAGTCATGAGCGTGGGGTTTATTTTCCAAGTGTTTTTGATGTCTCAATCAAATCACGTTGGATTATCAAGTTTGAAATTTTTGATCAACAACGAAGGGGAAGGAATTATTCACGAAGAAAATACACATTTGGTCCTGCAGAGATTATTCTCTCAAACATGTTTCACAAGATCGAGATGATGATTACAAAGTTGCCTTGCAAGGAGAGCATTTAGATTCGAGGACGAATCTTCTCGAAGAAGGGGAGAATGATAAGGAAATAAGTGATCAACTAGCTCAATCCAATTATTATGGTGAAGAATTGCATCCTTTCAAGATTCACAAAGGCATCCTTTCATCCAAGAGGCACAATGAATCTAAAAAGCTAGATTCATTCACATATTTAATGCATTATGTATCTTGTGTATTCATGAACTTGTATTTATGAAGGTTCATGCATGGATTTGAAAGGTTAGGAGTTGAATTTAGACCACATAGATGAAGGGTTGTGTCCTTTCATGGTGTCTTTTCAATTAGTATAAATAGGGATGTAATTTGTCATTTGAAGAAAACAAGTTGAATTTGAATGAAATTTCATATTGAGTTTAGTCTCTCTCAAGCTTTTATGCTTTCTTTGTGTTCTTGTGTTTAGAATGCATGCTTAGGACTTTCAATCTAATCTGATCAATTAGATTGTGGAGAGTTCGAAATCTTGAAGTTAGAAACAAGTTCTCCTTTCTTCTTGATCTTTGATCATCTTTCCAAGGCAAATATGTTTAACTTTCTTGGGGTTGTCTATCACTTCGTTAATGTGGTTATGCTTATTATTGTTGTGTGGGTTCACCTGAAATAAGGGGAGTTCTCAAACGTAATTGAGATAGTTCCTTTATCAGATCTGGTGCTTCCACGTGTCGCACAGGGGCGATCTAACGGTCTAGCCATTGGACAGCACATTAAGCATTTATCTGGCGATTTATTTTTATCGTTTGTTGGAATTTAATCTCTCATGATTACATGCAGATAAACGGTAACATTTCGATTCATGAAGGAATTTAGTTCGGCCAGGATTTAAAATGTTGGAGCTCCATTTAAATCAAAGAACTGGTACGCTTCTCTTCTCATTTTTCTTTTTCCTATCGAACTTTCTTTCTGCTCCCTTCCTGTTGTTGGGCGATTTACCGCAAGTGTACAGGTCGTCACAAGTAATATAGTGATTTTGAGTATAGAGTATCGTCTCCACAGGGATTGGATTTATTCAATTAATTACCATGAATAATCTTGCTTAGCTTTATTTAGAGAACAAAATCTAATGCCGAAAAGAATAACAAAAAGCTAATCTAGAAAGCAAAAGATAAATGGAGACACAATTTGGAGGGATAATTCTTAGAGGGTTGATTTTATCAATTGGACCTTTAATAGCTTAATCAAATTAACTAATATGGATTAACTAATCATTGATTCATAAGTCTAGAAGCCTAATGACAAGGACTCTCCTGTCGGTCTCCTCCTATCTCATACCTTTCAATAAAGAATCTCCTTTCGGTCTCCTCTTTATTTAGTTAGCATGGCATTACGACCCTTCAATATAACCTCTAACGTTATTTATTCTATCTCGTGTCACTCGGGTAAATAAGCGTTAGTCATGCATTCAGTTCTAGTCTAAGCTTCTCTCTGTCGAGTTTCCACTTAGTAACGATTCATTTAATCAGTGATCAGTTGATTAAAAACATTAAGGACAAAATGCACAAATGAACAATAATGACAATTAAACCAAATCAATTCATTAATCAAGCATAGGTTCAACATCTATATCAATCTCATAGAACTTAGGAATTAACTACTCATAATCACTAAAATCCAATAATTCCTAATCACAACAATTCTAGAAACTAAAACATAAAGGAAAAAGGGAAAAGAAATGCTCATAAAAAGTGTCGATCTCCTCGATCCCGCGCCGACCTCCATTGATTCCGAGCTCCAAAGATCTTCAACAAAGCTCCAAAACTCTCCCAAAAATCCCCAATTTTCGTGTGGACTCTAGAATGGGGTGAAAACCCACAAATTGGCTCTCCAAACTTGGATGAAAATGGCTCTATTTATAGGCTCCCAGTAGGCGTAGCGTCGCGACGCTACTTCACAGCGTCGCGTCGCTCTGGCGTCAGGTTGTCTTGGGCTCCAAGTTGTGGCAGCGTCGCGACGCTACATGGACAGCGTCGTGACGCTACCCCAATTCCAGAACTTTCCAGCGTGTTTTTGAGCTGATTTCTTTGGGCTTCCTTCATTTCTTTTGGCCCAACACTTTGTATGATAATTATTGGGCTCCTTCTTGACCCAACTTGATAATAAAAGCTTGAAATCCATGAATTTGGGCTTCTAACTCATTCTTCTTGGCTTTTTGGATTTGGGTCTTCAATGGACTTCTCCAAAATGCTTCAAAAAGCCCCCAAAACCATCCAAAATCTCTCAAAATTCCGGTTTTGCTTCCTTGGCTCGGTTTTCTGAATTTTAAACATAAAATAGCATTAAAGCACACAAATCAAGCATAAACCTAGCTAAAATCAATAGGAAAATGATAGCATTTCTGCCTGTTATCACCTGTACTTCCAACAACGCATGACTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAGCATCGATGTGGGTAAAGTTATCGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTGGGAAAACTATTCTTTCCAAACTCAATTACAATGCTTTGTAAGAGAGTAGGGGTTCCAGAGAGTTCGGAGGATGTGATCCTACTAGACAAGGGAGCAATCGACACGCCTAACTTGGCACGACTTCAAAGAACGCAAGAGGTACGTCAAGGGGGGCTAGTCTGTGGTGTTCATCATATCTTAGAACAACTCGCACTTTCAGCCAGCAGGCAAGAGTTCGCCGAAAGGCAGGCTCATACCTTATGGAATTATGTTAAAAGACGTGATGCTGCATTGAGGAAGGCACTCCAAGCTAATTTTTCCAAGCCCTATCCAGCCTTCTCCTATTCCCTGATGATTTGTTGA

mRNA sequence

ATGTTTTGCCAAAGAAGAAGACGTCGTGAGACCTACAAAATTGATGGCCAATTTTGGAAGGGTGTTCGACATAATTTGGCCGAGATACGTGAAGCCATGAATGATTATATTCAAATATGCAAAGAGATGGATTTACGAGACGAAGCCAAGAAGGCTCGAGCTGCACAATCCAATCAAATTAATGGAGATTGTTTAGCACCTCTGGATGATGACGACCAACACATTCAAAATGGGGGTGATCATCAAAATCAAGAAGAAGAAGAGACAAACGGCGAGGTTAGTATAAAAGACAATGATGTGGTTGATATATGTGTTGAGAATGAGCTTGAGGTAGATCGAGATGATGATTACAAAGTTGCCTTGCAAGGAGAGCATTTAGATTCGAGGACGAATCTTCTCGAAGAAGGGGAGAATGATAAGGAAATAAGTGATCAACTAGCTCAATCCAATTATTATGGTGAAGAATTGCATCCTTTCAAGATTCACAAAGGCATCCTTTCATCCAAGAGGCACAATGAATCTAAAAAGCTAGATTCATTCACATATTTAATGCATTATGTATCTTGTCATTTCTGCCTGTTATCACCTGTACTTCCAACAACGCATGACTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAGCATCGATGTGGGTAAAGTTATCGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTGGGAAAACTATTCTTTCCAAACTCAATTACAATGCTTTGTAAGAGAGTAGGGGTTCCAGAGAGTTCGGAGGATGTGATCCTACTAGACAAGGGAGCAATCGACACGCCTAACTTGGCACGACTTCAAAGAACGCAAGAGGTACGTCAAGGGGGGCTAGTCTGTGGTGTTCATCATATCTTAGAACAACTCGCACTTTCAGCCAGCAGGCAAGAGTTCGCCGAAAGGCAGGCTCATACCTTATGGAATTATGTTAAAAGACGTGATGCTGCATTGAGGAAGGCACTCCAAGCTAATTTTTCCAAGCCCTATCCAGCCTTCTCCTATTCCCTGATGATTTGTTGA

Coding sequence (CDS)

ATGTTTTGCCAAAGAAGAAGACGTCGTGAGACCTACAAAATTGATGGCCAATTTTGGAAGGGTGTTCGACATAATTTGGCCGAGATACGTGAAGCCATGAATGATTATATTCAAATATGCAAAGAGATGGATTTACGAGACGAAGCCAAGAAGGCTCGAGCTGCACAATCCAATCAAATTAATGGAGATTGTTTAGCACCTCTGGATGATGACGACCAACACATTCAAAATGGGGGTGATCATCAAAATCAAGAAGAAGAAGAGACAAACGGCGAGGTTAGTATAAAAGACAATGATGTGGTTGATATATGTGTTGAGAATGAGCTTGAGGTAGATCGAGATGATGATTACAAAGTTGCCTTGCAAGGAGAGCATTTAGATTCGAGGACGAATCTTCTCGAAGAAGGGGAGAATGATAAGGAAATAAGTGATCAACTAGCTCAATCCAATTATTATGGTGAAGAATTGCATCCTTTCAAGATTCACAAAGGCATCCTTTCATCCAAGAGGCACAATGAATCTAAAAAGCTAGATTCATTCACATATTTAATGCATTATGTATCTTGTCATTTCTGCCTGTTATCACCTGTACTTCCAACAACGCATGACTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAGCATCGATGTGGGTAAAGTTATCGCTGGTGAGATTTTTGGATGTTGGAGAAAGAAGGTGGGAAAACTATTCTTTCCAAACTCAATTACAATGCTTTGTAAGAGAGTAGGGGTTCCAGAGAGTTCGGAGGATGTGATCCTACTAGACAAGGGAGCAATCGACACGCCTAACTTGGCACGACTTCAAAGAACGCAAGAGGTACGTCAAGGGGGGCTAGTCTGTGGTGTTCATCATATCTTAGAACAACTCGCACTTTCAGCCAGCAGGCAAGAGTTCGCCGAAAGGCAGGCTCATACCTTATGGAATTATGTTAAAAGACGTGATGCTGCATTGAGGAAGGCACTCCAAGCTAATTTTTCCAAGCCCTATCCAGCCTTCTCCTATTCCCTGATGATTTGTTGA

Protein sequence

MFCQRRRRRETYKIDGQFWKGVRHNLAEIREAMNDYIQICKEMDLRDEAKKARAAQSNQINGDCLAPLDDDDQHIQNGGDHQNQEEEETNGEVSIKDNDVVDICVENELEVDRDDDYKVALQGEHLDSRTNLLEEGENDKEISDQLAQSNYYGEELHPFKIHKGILSSKRHNESKKLDSFTYLMHYVSCHFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNSITMLCKRVGVPESSEDVILLDKGAIDTPNLARLQRTQEVRQGGLVCGVHHILEQLALSASRQEFAERQAHTLWNYVKRRDAALRKALQANFSKPYPAFSYSLMIC

Homology

[Close]

BLAST of Spg024090 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-16
Identity = 65/172 (37.79%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 109 HF-LKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSL 168

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARL------QRTQEVRQGGLVCG------- 309
           IT LC+    P    +  L + G ID   +AR+      + TQ+                
Sbjct: 169 ITRLCR--NAPFLVNEEKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNG 228

Query: 310 -VHHILEQLALSASRQEFAERQAHTLWNYVKRRDAALRKALQANFSKPYPAF 348
            V   L+ L    S+QE   +Q    W Y K RD AL+KALQ NF++P P F
Sbjct: 229 DVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTF 277

[Close]

BLAST of Spg024090 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-16
Identity = 66/183 (36.07%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH  TVS++R+LL +++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 50  HF-LKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSL 109

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARL------QRTQE-----------VRQGG 309
           IT LC+    P    +  L   G ID   +AR+      + TQ+            R  G
Sbjct: 110 ITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANG 169

Query: 310 LVCGVHHILEQLALSASRQEF--------AERQAHTLWNYVKRRDAALRKALQANFSKPY 348
            +      LEQ       Q++          +Q    W Y K RD AL+KALQ NF++P 
Sbjct: 170 DILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPI 229

[Close]

BLAST of Spg024090 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-16
Identity = 66/183 (36.07%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 179 HF-LKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSL 238

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARL------QRTQEV-----------RQGG 309
           IT LC+    P    +  L + G ID   +AR+      + TQ+            R  G
Sbjct: 239 ITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNG 298

Query: 310 LVCGVHHILEQLALSASRQEF--------AERQAHTLWNYVKRRDAALRKALQANFSKPY 348
            +      LEQ       Q++          +Q    W Y K RD AL+KALQ NF++P 
Sbjct: 299 DILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPM 358

[Close]

BLAST of Spg024090 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-11
Identity = 49/148 (33.11%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 199 PTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNSITMLCKRVG 258
           PTTHDS++S E+++L + ++   +I+VGKV+   I  C +++ GKLFFP+ I  L  + G
Sbjct: 350 PTTHDSSISVEKIILLYCVVTGRTINVGKVVEKAILYCSKRRQGKLFFPSLIHKLLMQAG 409

Query: 259 VPESSEDVILL---DKGAIDTPNLARLQRTQEVRQGGLVCGVHHILEQ-LALSASRQEFA 318
           VPE ++D+++    +K  ID   +++L+   E  +G  + GV   +E+ L  S S  +F 
Sbjct: 410 VPEYTDDLVIKECEEKWTIDMKAVSKLRERSE--RGRELPGVTRAMEELLEQSCSMMDFL 469

Query: 319 ERQAHTLWNYVKRRDAALRKALQANFSK 343
             Q   +   +K   A L   L+A+  K
Sbjct: 470 IEQRAEMVEKLKTMQADLTTRLKASERK 495

[Close]

BLAST of Spg024090 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])

HSP 1 Score: 80.5 bits (197), Expect = 3.2e-11
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 181  TYLMHYVSCHFCLL-SPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRK 240
            T L   + C +  + S +LPT+HDSTVSRER+ + + I++   I+VGKVIA EIF C  +
Sbjct: 868  TDLKQDIKCLYNFMQSTLLPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHR 927

Query: 241  KVGKLFFPNSITMLCKRVGVPESSEDVILLDKGAID-TPNLARLQRTQEVRQGGLVCGVH 300
              GKLFF   IT  C+   VP  +++  +  KG +   P+ A  + T             
Sbjct: 928  VKGKLFFSCLITEKCRCANVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTAS--TSRD 987

Query: 301  HILEQLALSASRQEFAERQAHTLWNYVKRRDAALRKALQANF 341
             + E+L+   + Q+    +  T WNY + RD  + + L+ N+
Sbjct: 988  PMDERLSKHEALQQQMCERLQTHWNYERERDVWMMQNLRRNW 1027

[Close]

BLAST of Spg024090 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.5e-17
Identity = 65/172 (37.79%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 109 HF-LKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSL 168

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARL------QRTQEVRQGGLVCG------- 309
           IT LC+    P    +  L + G ID   +AR+      + TQ+                
Sbjct: 169 ITRLCR--NAPFLVNEEKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNG 228

Query: 310 -VHHILEQLALSASRQEFAERQAHTLWNYVKRRDAALRKALQANFSKPYPAF 348
            V   L+ L    S+QE   +Q    W Y K RD AL+KALQ NF++P P F
Sbjct: 229 DVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTF 277

[Close]

BLAST of Spg024090 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-16
Identity = 66/183 (36.07%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH  TVS++R+LL +++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 50  HF-LKSRLLPTTHGKTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSL 109

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARL------QRTQE-----------VRQGG 309
           IT LC+    P    +  L   G ID   +AR+      + TQ+            R  G
Sbjct: 110 ITQLCRNARAPFLVNEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANG 169

Query: 310 LVCGVHHILEQLALSASRQEF--------AERQAHTLWNYVKRRDAALRKALQANFSKPY 348
            +      LEQ       Q++          +Q    W Y K RD AL+KALQ NF++P 
Sbjct: 170 DILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPI 229

[Close]

BLAST of Spg024090 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.6e-16
Identity = 66/183 (36.07%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 179 HF-LKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSL 238

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARL------QRTQEV-----------RQGG 309
           IT LC+    P    +  L + G ID   +AR+      + TQ+            R  G
Sbjct: 239 ITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNG 298

Query: 310 LVCGVHHILEQLALSASRQEF--------AERQAHTLWNYVKRRDAALRKALQANFSKPY 348
            +      LEQ       Q++          +Q    W Y K RD AL+KALQ NF++P 
Sbjct: 299 DILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPM 358

[Close]

BLAST of Spg024090 vs. ExPASy TrEMBL
Match: A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-11
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 181  TYLMHYVSCHFCLL-SPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRK 240
            T L   + C +  + S +LPT+HDSTVSRER+ + + I++   I+VGKVIA EIF C  +
Sbjct: 868  TDLKQDIKCLYNFMQSTLLPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFECAHR 927

Query: 241  KVGKLFFPNSITMLCKRVGVPESSEDVILLDKGAID-TPNLARLQRTQEVRQGGLVCGVH 300
              GKLFF   IT  C+   VP  +++  +  KG +   P+ A  + T             
Sbjct: 928  VKGKLFFSCLITEKCRCANVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTAS--TSRD 987

Query: 301  HILEQLALSASRQEFAERQAHTLWNYVKRRDAALRKALQANF 341
             + E+L+   + Q+    +  T WNY + RD  + + L+ N+
Sbjct: 988  PMDERLSKHEALQQQMCERLQTHWNYERERDVWMMQNLRRNW 1027

[Close]

BLAST of Spg024090 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.6e-10
Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 190 HFCLLSPVLPTTHDSTVSRERVLLAFAILRSLSIDVGKVIAGEIFGCWRKKVGKLFFPNS 249
           HF L S +LPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ 
Sbjct: 170 HF-LKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSL 229

Query: 250 ITMLCKRVGVPESSEDVILLDKGAIDTPNLARLQRTQE 288
           IT LC+    P    +  L + G ID   +AR+  TQE
Sbjct: 230 ITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI--TQE 264

The following BLAST results are available for this feature:

BLAST of Spg024090 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	2.0e-16	37.79	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON59596.1	3.3e-16	36.07	hypothetical protein PanWU01x14_158080 [Parasponia andersonii]	[more]
PON46472.1	3.3e-16	36.07	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
XP_024971944.1	2.5e-11	33.11	uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]	[more]
KAF4375842.1	3.2e-11	33.33	hypothetical protein G4B88_026421 [Cannabis sativa]	[more]

BLAST of Spg024090 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg024090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	9.5e-17	37.79	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5CEY2	1.6e-16	36.07	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE...	[more]
A0A2P5BCG4	1.6e-16	36.07	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A7J6FZ22	1.6e-11	33.33	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1	[more]
A0A2P5AGA5	8.6e-10	44.90	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]

BLAST of Spg024090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024090.1	Spg024090.1	mRNA