Spg023993 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAAGCTATGACCAAGAGGAAGGGCAGGGCGCGGCAGGGTTGCGGTGGGCAACACGTCGGGGGATCCAGTTTCGGAGGCGACGAATGCCGGTGGCACGGCTCGGGGGGAAGAGATCGGGGCGGCTCGTGGCGTGGGGGAGAATGGTGAGGAAGATAAGGCTGAGATGGGTGAGATTGAAATGCATTGCCATGGTGAAGAAGATGAAAAAGTGCTACACAAGCTTGATGAAGGATGTAATGGAAGCAGGAGCACATGCTGACTCATATCAACATAGGCTTCTCTTGGAGTCTTCTTTCGCCTTTCCAATTCTGGGCGTCTCTTTCTCTAAACATTCAACTCATCCTACAACTCCATGA ATGGCTCAAAGCTATGACCAAGAGGAAGGGCAGGGCGCGGCAGGGTTGCGGTGGGCAACACGTCGGGGGATCCAGTTTCGGAGGCGACGAATGCCGGTGGCACGGCTCGGGGGGAAGAGATCGGGGCGGCTCGTGGCGTGGGGGAGAATGGTGAGGAAGATAAGGCTGAGATGGGTGAGATTGAAATGCATTGCCATGGTGAAGAAGATGAAAAAGTGCTACACAAGCTTGATGAAGGATGTAATGGAAGCAGGAGCACATGCTGACTCATATCAACATAGGCTTCTCTTGGAGTCTTCTTTCGCCTTTCCAATTCTGGGCGTCTCTTTCTCTAAACATTCAACTCATCCTACAACTCCATGA ATGGCTCAAAGCTATGACCAAGAGGAAGGGCAGGGCGCGGCAGGGTTGCGGTGGGCAACACGTCGGGGGATCCAGTTTCGGAGGCGACGAATGCCGGTGGCACGGCTCGGGGGGAAGAGATCGGGGCGGCTCGTGGCGTGGGGGAGAATGGTGAGGAAGATAAGGCTGAGATGGGTGAGATTGAAATGCATTGCCATGGTGAAGAAGATGAAAAAGTGCTACACAAGCTTGATGAAGGATGTAATGGAAGCAGGAGCACATGCTGACTCATATCAACATAGGCTTCTCTTGGAGTCTTCTTTCGCCTTTCCAATTCTGGGCGTCTCTTTCTCTAAACATTCAACTCATCCTACAACTCCATGA MAQSYDQEEGQGAAGLRWATRRGIQFRRRRMPVARLGGKRSGRLVAWGRMVRKIRLRWVRLKCIAMVKKMKKCYTSLMKDVMEAGAHADSYQHRLLLESSFAFPILGVSFSKHSTHPTTP Homology
BLAST of Spg023993 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida]) HSP 1 Score: 185.3 bits (469), Expect = 3.2e-43 Identity = 95/118 (80.51%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Spg023993 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.1 bits (466), Expect = 7.0e-43 Identity = 97/117 (82.91%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Spg023993 vs. NCBI nr
Match: KAG6581768.1 (hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177.2 bits (448), Expect = 8.6e-41 Identity = 90/115 (78.26%), Postives = 102/115 (88.70%), Query Frame = 0
BLAST of Spg023993 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata]) HSP 1 Score: 172.2 bits (435), Expect = 2.8e-39 Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 0
BLAST of Spg023993 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 2.3e-38 Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of Spg023993 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.4e-43 Identity = 97/117 (82.91%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Spg023993 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 0
BLAST of Spg023993 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.9e-31 Identity = 80/118 (67.80%), Postives = 93/118 (78.81%), Query Frame = 0
BLAST of Spg023993 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.5e-30 Identity = 80/118 (67.80%), Postives = 92/118 (77.97%), Query Frame = 0
BLAST of Spg023993 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.3e-23 Identity = 77/128 (60.16%), Postives = 91/128 (71.09%), Query Frame = 0
BLAST of Spg023993 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.9 bits (185), Expect = 2.5e-14 Identity = 47/107 (43.93%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of Spg023993 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 8.4e-10 Identity = 43/112 (38.39%), Postives = 70/112 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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