Spg023987 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGTTTCGTTCTCGACCTTTTGTATCTTCCTCTCTATGGTTGGTTAATAAGTTTAGATACTCTTTTGCTGCAAAAAATGAAGTTCACAATGGCATACAGCATATACAGGACATTGGCCTAAATATAAAGTATATTTTGTACTTACCGTTGGTATCTCTTGTAGGGCACTGAAAGAAGAAAAATATGCAGCCCGTCGTGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGGTAAAATGAATGATTTTCTATGTAGGCTGCTCTCAATCTTCCACTAAACTGGTTGAAACCATTTGGATCCCTGGACGGTTTTAACAAAGCTTAACATCATTTTCTAACCATGTCTGTGATCACTTTCCAGATTCGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTCATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTCTACAACTCCGGAAAATGGATGCCTCCAGCAACTGGTGAGCTACGACCTGAAGTCTGGTGA ATGCTGTTTCGTTCTCGACCTTTTGTATCTTCCTCTCTATGGGCACTGAAAGAAGAAAAATATGCAGCCCGTCGTGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGATTCGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTCATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTCTACAACTCCGGAAAATGGATGCCTCCAGCAACTGGTGAGCTACGACCTGAAGTCTGGTGA ATGCTGTTTCGTTCTCGACCTTTTGTATCTTCCTCTCTATGGGCACTGAAAGAAGAAAAATATGCAGCCCGTCGTGCAATATTGCCTGTGCTTCAAGCTGAGGAAGATGAAAGATTCGTCAAAGAGTGGAAGAGTTACCTCGAATATGAGGCTGAAGTCATGAAGGATGTGCCTGGTTGGAAAGTTGGTGAAAGTGTCTACAACTCCGGAAAATGGATGCCTCCAGCAACTGGTGAGCTACGACCTGAAGTCTGGTGA MLFRSRPFVSSSLWALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPEVW Homology
BLAST of Spg023987 vs. NCBI nr
Match: XP_008460702.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis melo]) HSP 1 Score: 150.2 bits (378), Expect = 8.0e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. NCBI nr
Match: KAA0031969.1 (NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13-B [Cucumis melo var. makuwa] >TYK16789.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13-B [Cucumis melo var. makuwa]) HSP 1 Score: 150.2 bits (378), Expect = 8.0e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. NCBI nr
Match: XP_004147172.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis sativus] >KGN61547.1 hypothetical protein Csa_006591 [Cucumis sativus]) HSP 1 Score: 150.2 bits (378), Expect = 8.0e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. NCBI nr
Match: XP_023006332.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Cucurbita maxima]) HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. NCBI nr
Match: XP_022959289.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita moschata] >XP_023549201.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita pepo subsp. pepo] >XP_038876329.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Benincasa hispida] >KAG6574882.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013454.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy Swiss-Prot
Match: O49313 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 3.7e-33 Identity = 64/71 (90.14%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy Swiss-Prot
Match: Q8RWA7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana OX=3702 GN=MEE4 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.1e-32 Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy Swiss-Prot
Match: Q95KV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus OX=9913 GN=NDUFA13 PE=1 SV=3) HSP 1 Score: 73.9 bits (180), Expect = 9.5e-13 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy Swiss-Prot
Match: Q0MQ89 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA13 PE=2 SV=3) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-12 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy Swiss-Prot
Match: Q9P0J0 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens OX=9606 GN=NDUFA13 PE=1 SV=3) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-12 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy TrEMBL
Match: A0A5D3D2M4 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 13-B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00520 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.9e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy TrEMBL
Match: A0A0A0LLE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169710 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.9e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy TrEMBL
Match: A0A1S3CD20 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Cucumis melo OX=3656 GN=LOC103499471 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.9e-33 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy TrEMBL
Match: A0A6J1KIP8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Cucurbita maxima OX=3661 GN=LOC111494802 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.6e-33 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. ExPASy TrEMBL
Match: A0A6J1KVK1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like OS=Cucurbita maxima OX=3661 GN=LOC111499103 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 8.6e-33 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Spg023987 vs. TAIR 10
Match: AT2G33220.1 (GRIM-19 protein ) HSP 1 Score: 141.7 bits (356), Expect = 2.6e-34 Identity = 64/71 (90.14%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of Spg023987 vs. TAIR 10
Match: AT1G04630.1 (GRIM-19 protein ) HSP 1 Score: 140.2 bits (352), Expect = 7.7e-34 Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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